KR20210146138A - Guide RNA for editing ms1-like gene and use thereof - Google Patents

Guide RNA for editing ms1-like gene and use thereof Download PDF

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KR20210146138A
KR20210146138A KR1020200063227A KR20200063227A KR20210146138A KR 20210146138 A KR20210146138 A KR 20210146138A KR 1020200063227 A KR1020200063227 A KR 1020200063227A KR 20200063227 A KR20200063227 A KR 20200063227A KR 20210146138 A KR20210146138 A KR 20210146138A
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박지희
한정헌
이연희
박상렬
홍준기
서은정
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Abstract

The present invention relates to a guide RNA (gRNA) for editing a tomato pollen development-related gene and to a use thereof, and more specifically, to a guide RNA for editing a tomato-derived ms1-like gene and to a use thereof. According to the present invention, it is possible to be applied to the production of male sterility by knocking out a pollen development-related gene using gRNA, thereby reducing the production cost of tomato hybrid seeds.

Description

토마토 꽃가루 발달 관련 유전자 교정용 가이드 RNA 및 이의 용도{Guide RNA for editing ms1-like gene and use thereof}Guide RNA for editing tomato pollen development-related gene and its use {Guide RNA for editing ms1-like gene and use thereof}

본 발명은 토마토 꽃가루 발달 관련 유전자 교정용 가이드 RNA(gRNA) 및 이의 용도에 관한 것이다. 구체적으로는 토마토 유래 ms1-like 유전자 교정용 가이드 RNA 및 이의 용도에 관한 것이다.The present invention relates to a guide RNA (gRNA) for editing a tomato pollen development-related gene and use thereof. Specifically, it relates to a guide RNA for editing a tomato-derived ms1-like gene and its use.

작물의 웅성불임은 인위적 혹은 자연적인 유전적 돌연변이를 통해 웅성능력을 상실하는 경우를 가리킨다. 이는 일종의 돌연변이로 웅성기관, 즉 수술의 결함으로 수정능력이 있는 화분을 생산하지 못하는 현상이다.Male sterility of crops refers to the loss of male ability through artificial or natural genetic mutation. This is a kind of mutation, and it is a phenomenon in which pollen with fertilization ability cannot be produced due to a defect in the male organ, that is, surgery.

웅성불임 종류는 화분 불임성, 웅애불임성, 화분의 기능적 불임성 등으로 나눌 수 있으며, 이러한 웅성불임의 특징을 이용하여 일대 잡종 종자를 생산할 수 있다. 즉, 양성화 식물의 경우 교배에 앞서 수술을 제거하는 제웅 과정을 거쳐야 하는데 이러한 과정이 매우 번거롭고 노동력이 많이 드는 과정이다. 웅성불임성을 가지는 계통을 통해 모계로 하면 제웅을 하지 않고 그대로 인공수분을 하거나 자연 교배를 통해 일대 잡종 계통을 만들 수 있는 장점이 있다. 유전자적 웅성불임(GMS)은 꽃가루 생산에 관여하는 핵의 유전자에 열성돌연변이가 일어난 것으로, 불임성은 열성유전한다. 그러나 이러한 유전자적 웅성불임은 그 유지를 불임계에 이형접합체를 교배하여 가임과 불임이 분리되는 현상을 겪게 되는데 이에 대해 모계의 유지를 위해서 표현형을 관찰하여 제거해야 한다는 문제점이 있다.Male sterility can be divided into pollen sterility, male sterility, functional sterility of pollen, etc., and hybrid seeds can be produced using these characteristics of male sterility. In other words, in the case of bisexual plants, they must go through a process of removing stamens prior to breeding, which is a very cumbersome and labor-intensive process. If a line with male sterility is used as a maternal line, it has the advantage of being able to artificially pollinate as it is without sterilization or create a hybrid line through natural crossbreeding. Genetic male infertility (GMS) is a recessive mutation in a gene in the nucleus involved in pollen production, and infertility is recessive. However, in this genetic male infertility, the maintenance of fertility and infertility are separated by crossing the heterozygote to the infertility.

한편, 토마토는 전 세계 주요 작물 중 하나로 세계적으로 가공용 토마토의 소비가 꾸준히 늘어 종자소요량이 증가하고 있다. 하지만, 종자생산 비용이 판매비 보다 높아 효율적인 종자생산체계 마련이 시급한 실정이다. 토마토는 다양한 유전자적 웅성불임을 갖고 있으나, 순수한 토마토의 웅성불임 계통을 유지하기 어려워서 상업적으로 활발하게 이용되지 못하고 있다. On the other hand, tomatoes are one of the major crops in the world, and the consumption of tomatoes for processing worldwide is steadily increasing, and the seed demand is increasing. However, since the cost of seed production is higher than the selling cost, there is an urgent need to prepare an efficient seed production system. Tomatoes have various genetic male sterility, but it is difficult to maintain the male sterility line of pure tomatoes, so it is not actively used commercially.

토마토의 웅성불임에 대해 많은 연구가 진행되었다. 하지만 웅성불임에 있어서 화분의 발달에 영향을 미치는 여러 기초적인 메커니즘 및 유전자의 기능 연구 등은 매우 미약한 편이다. 재배종 토마토에서 유전자적 웅성불임은 일반적인 현상으로, 많은 돌연변이 개체들에서 하나의 열성 유전자에 의해 조절된다고 보고되었다. 토마토에서 화분의 웅성불임과 관련된 유전자는 대략 45 개 정도 존재하는 것으로 알려져 있다. Many studies have been conducted on male infertility in tomatoes. However, in male infertility, studies on various basic mechanisms and gene functions affecting the development of pollen are very weak. Genetic male infertility in cultivar tomatoes is a common phenomenon and has been reported to be regulated by a single recessive gene in many mutant individuals. In tomato, it is known that there are about 45 genes related to male sterility of pollen.

이에, 본 발명자들은 교잡종자 생산비용을 대폭 절감할 수 있는 토마토 웅성불임 활용체계 구축하여 웅성불임 토마토 생산하기 위해 노력한 결과, 토마토 유전자 교정용 가이드 RNA를 이용하여 ms1-like 유전자가 높은 확률로 유전자 서열에 변이가 일어남을 확인함으로써, 본 발명을 완성하였다. Accordingly, the present inventors made efforts to produce male sterile tomatoes by constructing a tomato male sterility utilization system that can significantly reduce hybrid seed production costs. As a result, the ms1-like gene has a high probability of gene sequence using tomato gene editing guide RNA. By confirming that the mutation occurred, the present invention was completed.

대한민국 등록특허 제10-1242434호Republic of Korea Patent Registration No. 10-1242434

본 발명은 서열번호 3과 동일하거나 상보적인 염기서열로 이루어진 토마토 유전자 교정용 가이드 RNA 및 상기 가이드 RNA를 포함하는 토마토 유전자 교정용 벡터의 제공을 목적으로 한다.An object of the present invention is to provide a tomato gene editing guide RNA comprising the same or complementary nucleotide sequence as SEQ ID NO: 3 and a tomato gene editing vector comprising the guide RNA.

또한, 본 발명은 상기 가이드 RNA 또는 상기 유전자 교정용 벡터를 포함하는 토마토 유전자 교정용 조성물의 제공을 목적으로 한다.In addition, the present invention aims to provide a composition for tomato gene editing comprising the guide RNA or the vector for gene editing.

또한, 본 발명은 상기 벡터를 형질도입하여 토마토 유전자가 교정된 형질전환 식물체 및 상기 형질전환 식물체의 제조방법의 제공을 목적으로 한다.Another object of the present invention is to provide a transgenic plant in which the tomato gene is corrected by transducing the vector and a method for producing the transgenic plant.

상기의 목적을 달성하기 위하여, 본 발명은 서열번호 3과 동일하거나 상보적인 염기서열로 이루어진 토마토 유전자 교정용 가이드 RNA를 제공할 수 있다.In order to achieve the above object, the present invention can provide a guide RNA for editing tomato gene consisting of the same or complementary nucleotide sequence to SEQ ID NO: 3.

또한, 본 발명은 상기 토마토 유전자는 서열번호 1로 이루어진 ms1-like 유전자인 것을 특징으로 하는, 가이드 RNA를 제공할 수 있다.In addition, the present invention can provide a guide RNA, characterized in that the tomato gene is an ms1-like gene consisting of SEQ ID NO: 1.

또한, 본 발명은 상기 가이드 RNA를 포함하는 토마토 유전자 교정용 벡터를 제공할 수 있다.In addition, the present invention may provide a vector for editing tomato gene comprising the guide RNA.

또한, 본 발명은 상기 토마토 유전자는 서열번호 1로 이루어진 ms1-like 유전자인 것을 특징으로 하는, 벡터를 제공할 수 있다.In addition, the present invention can provide a vector, characterized in that the tomato gene is an ms1-like gene consisting of SEQ ID NO: 1.

또한, 본 발명은 cas9 단백질을 암호화하는 염기서열을 더 포함하는 것을 특징으로 하는 벡터를 제공할 수 있다.In addition, the present invention can provide a vector characterized in that it further comprises a nucleotide sequence encoding the cas9 protein.

또한, 본 발명은 상기 가이드 RNA 또는 상기 유전자 교정용 벡터를 포함하는 토마토 유전자 교정용 조성물을 제공할 수 있다.In addition, the present invention may provide a composition for tomato gene editing comprising the guide RNA or the vector for gene editing.

또한, 본 발명은 상기 벡터를 형질도입하여 토마토 유전자가 교정된 형질전환 식물체를 제공할 수 있다.In addition, the present invention can provide a transgenic plant in which the tomato gene is corrected by transducing the vector.

또한, 본 발명은 식물체는 웅성불임 변이체인 것을 특징으로 하는, 식물체를 제공할 수 있다.In addition, the present invention may provide a plant, characterized in that the plant is a male infertility mutant.

또한, 본 발명은 서열번호 3과 동일하거나 상보적인 염기서열로 이루어진 가이드 RNA를 포함하는 토마토 유전자 교정용 벡터를 준비하는 단계; 및 상기 벡터를 식물체에 형질도입하여 토마토 유전자를 교정하는 단계를 포함하는, 형질전환 식물체의 제조방법을 제공할 수 있다.In addition, the present invention comprises the steps of preparing a tomato gene correction vector comprising a guide RNA consisting of the same or complementary nucleotide sequence to SEQ ID NO: 3; and transducing the vector into the plant to correct the tomato gene, it may provide a method for producing a transgenic plant.

또한, 본 발명은 상기 토마토 유전자는 서열번호 1로 이루어진 ms1-like 유전자인 것을 특징으로 하는, 형질전환 식물체의 제조방법을 제공할 수 있다.In addition, the present invention can provide a method for producing a transgenic plant, characterized in that the tomato gene is an ms1-like gene consisting of SEQ ID NO: 1.

또한, 본 발명은 상기 식물체는 웅성불임 변이체인 것을 특징으로 하는, 형질전환 식물체의 제조방법을 제공할 수 있다.In addition, the present invention may provide a method for producing a transgenic plant, characterized in that the plant is a male infertility mutant.

본 발명에 따르면, gRNA를 이용하여 꽃가루 발달 관련 유전자를 knock-out 시킴으로써 웅성불임체 제조에 응용 가능하여, 토마토 교잡종자 생산비용을 절감할 수 있다.According to the present invention, it can be applied to the production of male sterility by knocking out pollen development-related genes using gRNA, thereby reducing the production cost of tomato hybrid seeds.

도 1은 ms1-like 유전자 선정 gRNA 위치를 나타낸 것이다. gRNA는 빨간색으로 표시하였다.
도 2는 ms1035 유전자 선정 gRNA 위치를 나타낸 것이다. gRNA는 빨간색으로 표시하였다.
도 3은 토마토 유전자 편집체 제작을 위한 gRNA, CRISPR/Cas9 벡터 모식도를 나타낸 것이다.
도 4는 ms1-like 유전자 및 ms1035 유전자를 gRNA를 이용한 벡터로 형질전환된 형질전환 토마토에서 gDNA를 추출하여 PCR을 수행하여 염기서열을 분석한 결과를 나타낸다.
1 shows the gRNA positions selected for the ms1-like gene. gRNAs are indicated in red.
Figure 2 shows the location of the ms10 35 gene selected gRNA. gRNAs are indicated in red.
3 shows a schematic diagram of a gRNA, CRISPR/Cas9 vector for production of a tomato gene edit.
4 shows the results of analyzing the nucleotide sequence by performing PCR by extracting gDNA from the transformed tomato transformed with the vector using the gRNA of the ms1-like gene and the ms10 35 gene.

달리 정의되지 않는 한, 본 명세서에서 사용된 모든 기술적 및 과학적 용어들은 본 발명이 속하는 기술 분야에서 숙련된 전문가에 의해서 통상적으로 이해되는 것과 동일한 의미를 갖는다. 일반적으로, 본 명세서에서 사용된 명명법 및 이하에 기술하는 실험 방법은 본 기술 분야에서 잘 알려져 있고 통상적으로 사용되는 것이다.Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. In general, the nomenclature used herein and the experimental methods described below are those well known and commonly used in the art.

본 발명은 이에, 본 발명자들은 교잡종자 생산비용을 대폭 절감할 수 있는 토마토 웅성불임 활용체계 구축하여 웅성불임 토마토 생산하기 위해 노력한 결과, 토마토 유전자 교정용 가이드 RNA를 이용하여 ms1-like 유전자가 높은 확률로 유전자 서열에 변이가 일어남을 확인함으로써 완성되었다.As a result of the present invention, the present inventors made efforts to produce male sterile tomatoes by constructing a tomato male sterility utilization system that can significantly reduce hybrid seed production costs. This was completed by confirming that the mutation occurred in the gene sequence.

본 발명은 일 관점에서, 서열번호 3과 동일하거나 상보적인 염기서열로 이루어진 토마토 유전자 교정용 가이드 RNA에 관한 것이다.The present invention, in one aspect, relates to a guide RNA for tomato gene editing consisting of a nucleotide sequence identical to or complementary to SEQ ID NO: 3.

본 발명의 "가이드 RNA(guide RNA, gRNA)"란 RNA(ribonucleic acid)의 한 종류로, 인간이나 동식물의 특정 유전자를 교정하는 유전자 교정(genome editing)에서 교정하려는 DNA를 인식하여 찾아내는 RNA를 의미한다. "Guide RNA (gRNA)" of the present invention is a type of RNA (ribonucleic acid), and refers to RNA that recognizes and finds DNA to be edited in genome editing that corrects a specific gene in humans or animals and plants do.

유전자 교정 기술로는 유전자 가위(engineered nuclease)가 있으며, 유전자 가위의 종류로 CRISPRCas9이 있다.Gene editing technology includes engineered nuclease, and CRISPRCas9 is a type of gene editing technology.

본 발명에서 "CRISPR-Cas9"이란 미생물의 면역체계로 알려진 CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) 시스템을 이용해 원하는 유전자 염기서열을 절단하도록 고안된 것으로서, 고정적 구성요소로서 Cas9 단백질을 포함하고, 가변적 구성요소로서 타겟 유전자에 특이적인 가이드 RNA를 포함한다. 이때 가이드 RNA는 20 bp 길이의 타겟유전자 부위와 서열의 3‘쪽에 PAM서열(5’- NGG -3’)이 존재해야 한다. 가이드 RNA가 타겟 유전자를 인식하면 가이드 RNA에 Cas9 단백질이 결합하여 뉴클레아제로 작용하여 타겟 유전자 부위중 PAM 서열로부터 상위 3-4bp 사이를 절단함으로써 DNA 이중가닥 손상(DNA double strand break, DSB)을 유발한다. 이중가닥 손상으로 인해 염기서열의 교정이 발생할 수 있다.In the present invention, "CRISPR-Cas9" is designed to cut a desired gene sequence using the CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) system known as the immune system of microorganisms. as a guide RNA specific to the target gene. In this case, the guide RNA should have a target gene region of 20 bp in length and a PAM sequence (5'-NGG -3') at the 3' side of the sequence. When the guide RNA recognizes the target gene, the Cas9 protein binds to the guide RNA and acts as a nuclease to cut between the top 3-4 bp from the PAM sequence in the target gene region, causing DNA double strand break (DSB) do. A double-stranded break can lead to sequence correction.

상기 가이드 RNA는 토마토 유래 ms1-like 유전자(3085bp, Solyc04g00842)의 특정서열을 표적으로 하며, 상기 ms1-like 유전자는 서열번호 1의 염기서열로 이루어진 것일 수 있다. The guide RNA may target a specific sequence of a tomato-derived ms1-like gene (3085bp, Solyc04g00842), and the ms1-like gene may consist of the nucleotide sequence of SEQ ID NO: 1.

상기 ms1-like 유전자는 토마토 꽃가루 발달 관련 유전자의 일종으로, 웅성불임 변이체에 유용하게 활용될 수 있다.The ms1-like gene is a kind of tomato pollen development-related gene, and can be usefully used in male infertility mutants.

본 발명의 다른 관점에서, 상기 가이드 RNA를 포함하는 토마토 유전자 교정용 벡터에 관한 것이다.In another aspect of the present invention, it relates to a vector for editing tomato gene comprising the guide RNA.

본 발명의 유전자 교정용 벡터는 토마토 유전자, 구체적으로는 ms1-like 유전자를 교정하기 위해 특이적으로 인식하는 가이드 RNA가 도입된 식물형질 전환용 벡터를 의미한다.The vector for gene editing of the present invention refers to a vector for plant transformation into which a guide RNA specifically recognized to correct a tomato gene, specifically, an ms1-like gene is introduced.

본 발명에 따른 벡터는 cas9 단백질을 암호화하는 염기서열을 더 포함할 수 있다. The vector according to the present invention may further include a nucleotide sequence encoding a cas9 protein.

상기 벡터는 목적하는 유전자의 발현 억제 또는 유전자의 발현이 증진될 수 있도록, 발현조절 서열과 기능적으로 연결될 수 있다. 예를 들어, 벡터는 프로모터, 오퍼레이터, 개시코돈, 종결코돈, 폴리아데닐화 시그널, 인핸서 같은 발현 조절 요소 외에도 막 표적화 또는 분비를 위한 신호 서열 또는 리더 서열을 포함하며 목적에 따라 다양하게 제조될 수 있다. 또한, 벡터는 선택성 마커를 포함할 수 있으며, 벡터는 자가 복제하거나 숙주 DNA에 통합될 수 있다. The vector may be functionally linked with an expression control sequence so that the expression of a desired gene can be suppressed or the expression of a gene can be enhanced. For example, the vector includes a signal sequence or leader sequence for membrane targeting or secretion in addition to expression control elements such as a promoter, operator, initiation codon, stop codon, polyadenylation signal, and enhancer, and can be prepared in various ways depending on the purpose. . In addition, the vector may include a selectable marker, and the vector may be self-replicating or integrated into host DNA.

본 발명의 벡터는 당해 기술 분야에서 잘 알려진 유전자 재조합 기술을 이용하여 제조할 수 있으며, 부위-특이적 DNA 절단 및 연결은 당해 기술 분야에서 일반적으로 알려진 효소 등을 사용할 수 있다.The vector of the present invention may be prepared using a genetic recombination technique well known in the art, and for site-specific DNA cleavage and ligation, an enzyme generally known in the art may be used.

본 발명의 일실시예에서, 온실배양 토마토 형질전환체의 gDNA를 추출하여 ms1_check_F/R로 PCR을 수행하고 증폭된 산물은 pGEM T-easy 벡터에 클로닝하여 염기서열을 분석하였다. 그 결과, ms1-like 유전자에서는 염기 1개가 첨가된 것, 염기 1개가 결손된 것, 그리고 염기 5개가 결손된 것을 확인하였으나, ms1035 유전자는 유전자 서열의 변이가 일어나지 않음을 확인하였다(도 4). 즉, 서열번호 3과 동일하거나 상보적인 염기서열로 이루어진 gRNA의 형질도입이 토마토의 ms1-like 유전자의 서열변이(유전자 교정)을 효율적으로 유도함을 확인하였다. In one embodiment of the present invention, the gDNA of the green tomato transformant was extracted, PCR was performed with ms1_check_F/R, and the amplified product was cloned into the pGEM T-easy vector and the nucleotide sequence was analyzed. As a result, it was confirmed that one base was added, one base was deleted, and five bases were deleted in the ms1-like gene, but it was confirmed that the gene sequence mutation did not occur in the ms10 35 gene (Fig. 4). . That is, it was confirmed that transduction of gRNA consisting of the same or complementary nucleotide sequence as SEQ ID NO: 3 efficiently induces sequence mutation (gene correction) of the ms1-like gene of tomato.

본 발명의 또 다른 관점에서, 상기 가이드 RNA 또는 상기 유전자 교정용 벡터를 포함하는 토마토 유전자, 구체적으로는 ms1-like 유전자 교정용 조성물을 제공한다.In another aspect of the present invention, there is provided a composition for editing tomato genes, specifically ms1-like genes, including the guide RNA or the vector for gene editing.

본 발명의 ms1-like 유전자 교정용 조성물은 서열번호 3과 동일하거나 상보적인 염기서열로 이루어진 토마토 유전자 교정용 가이드 RNA 또는 이를 포함하는 유전자 교정용 벡터를 포함한다.The composition for ms1-like gene editing of the present invention includes a guide RNA for tomato gene editing comprising the same or complementary nucleotide sequence as SEQ ID NO: 3 or a gene editing vector containing the same.

본 발명의 또 다른 관점에서, 상기 벡터를 형질도입하여 토마토 유전자, 구체적으로는 ms1-like 유전자가 교정된 형질전환 식물체를 제공한다. In another aspect of the present invention, a transgenic plant in which a tomato gene, specifically, an ms1-like gene, is corrected by transducing the vector is provided.

본 발명에서 “형질전환”은, 유전물질인 DNA를 다른 계통의 살아 있는 세포에 주입했을 때, DNA가 그 세포에 들어가 유전형질(遺傳形質)을 변화시키는 현상으로, 형질변환, 형전환, 또는 형변환 이라고도 한다.In the present invention, “transformation” refers to a phenomenon in which DNA enters the cell and changes the genetic trait when DNA, which is a genetic material, is injected into a living cell of another lineage. Also called conversion.

본 발명에서 상기 벡터로 식물체를 "형질전환"하는 것은 당업자에게 공지된 형질전환기술에 의해 수행될 수 있다. 구체적으로는, 아그로박테리움을 이용한 형질전환방법, 미세사출법(microprojectile bombardment), 일렉트로포레이션(electroporation), PEG-매개 융합법(PEG-mediated fusion), 미세주입법(microinjection), 리포좀 매개법(liposome-mediated method), 인-플란타 형질전환법(In planta transformation), 진공 침윤법(Vacuum infiltration method), 화아침지법(floral meristem dipping method), 및 아그로박테리아 분사법(Agrobacteria spraying method)을 이용할 수 있다.In the present invention, "transformation" of a plant with the vector can be performed by transformation techniques known to those skilled in the art. Specifically, transformation method using Agrobacterium, microprojectile bombardment, electroporation, PEG-mediated fusion, microinjection, liposome-mediated method ( liposome-mediated method, In planta transformation, Vacuum infiltration method, floral meristem dipping method, and Agrobacteria spraying method can

본 발명에서 "식물체"는, 성숙한 식물체뿐만 아니라 성숙한 식물로 발육할 있는 식물 세포, 식물 조직 및 식물의 종자 등을 모두 포함하는 의미로서 이해된다.In the present invention, the term "plant" is understood to include not only mature plants, but also plant cells, plant tissues, and seeds of plants that can develop into mature plants.

본 발명에서 상기 식물체는 토마토, 애기장대, 배추, 무, 고추, 딸기, 수박, 오이, 양배추, 참외, 호박, 파, 양파 또는 당근을 포함하는 채소 작물류; 벼, 밀, 보리, 옥수수, 콩, 감자, 밀, 팥, 귀리 또는 수수를 포함하는 식량 작물류; 인삼, 담배, 목화, 참깨, 사탕수수, 사탕무우, 들깨, 땅콩 또는 유채를 포함하는 특용작물류; 사과나무, 배나무, 대추나무, 복숭아, 양다래, 포도, 감귤, 감, 자두, 살구 또는 바나나를 포함하는 과수류; 장미, 글라디올러스, 거베라, 카네이션, 국화, 백합 또는 튤립을 포함하는 화훼류; 및 라이그라스, 레드클로버, 오차드그라스, 알파알파, 톨페스큐 또는 페레니얼라이그라스를 포함하는 사료작물류로 이루어진 군으로부터 선택된 어느 하나이며, 구체적으로는 인삼, 담배, 목화, 참깨, 사탕수수, 사탕무우, 들깨, 땅콩 또는 유채를 포함하는 특용작물류이며, 더욱 구체적으로는 토마토일 수 있다.In the present invention, the plants include vegetable crops including tomatoes, Arabidopsis thaliana, Chinese cabbage, radish, red pepper, strawberry, watermelon, cucumber, cabbage, melon, pumpkin, green onion, onion or carrot; food crops including rice, wheat, barley, maize, soybean, potato, wheat, red bean, oat or sorghum; special crops including ginseng, tobacco, cotton, sesame, sugar cane, sugar beet, perilla, peanut or rapeseed; fruit trees including apple trees, pear trees, jujube trees, peaches, poplars, grapes, tangerines, persimmons, plums, apricots or bananas; flowers including roses, gladiolus, gerberas, carnations, chrysanthemums, lilies or tulips; And ryegrass, red clover, orchard grass, alpha alpha, tall fescue or any one selected from the group consisting of forage crops including perennial ryegrass, specifically ginseng, tobacco, cotton, sesame, sugar cane, sugar beet, It is a special crop containing perilla, peanut or rapeseed, and more specifically may be a tomato.

따라서 본 발명의 “식물체”는 ml1-like 유전자 교정(서열변이), 구체적으로 유전자의 삽입 또는 결손이 유도되어, 웅성불임 변이체로 형질전환된 것을 특징으로 한다.Therefore, the "plant" of the present invention is characterized in that it is transformed into a male infertility mutant by inducing ml1-like gene correction (sequence mutation), specifically, gene insertion or deletion.

본 발명의 또 다른 관점에서, 서열번호3과 동일하거나 상보적인 염기서열로 이루어진 가이드 RNA를 포함하는 토마토 유전자 교정용 벡터를 준비하는 단계 및 상기 벡터를 식물체에 형질도입하여 토마토 유전자를 교정하는 단계를 포함하는 형질전환 식물체의 제조방법을 제공한다. In another aspect of the present invention, preparing a tomato gene correction vector comprising a guide RNA consisting of a nucleotide sequence identical to or complementary to SEQ ID NO: 3 and transducing the vector into a plant to correct the tomato gene It provides a method for producing a transgenic plant comprising the.

본 발명에서 토마토 유전자, 구체적으로 ms1-like 유전자 교정은 식물체에 형질도입된 가이드 RNA에 의해 ms1-like 유전자를 특정영역에 삽입 또는 결손을 유도하는 것을 의미한다. 구체적으로, 유전자 가위 시스템의 cas9 단백질을 이용하여 유전자를 교정하는 것일 수 있다. In the present invention, tomato gene, specifically, ms1-like gene correction means inducing insertion or deletion of the ms1-like gene into a specific region by the guide RNA transduced into the plant. Specifically, the gene may be corrected using the cas9 protein of the gene editing system.

따라서 본 발명의 방법은 식물체에 cas9 단백질을 추가적으로 처리되거나 또는 cas9 단백질을 발현하는 벡터를 형질도입하는 단계를 포함할 수 있다. Accordingly, the method of the present invention may include the step of transducing the plant with a cas9 protein additionally treated or a vector expressing the cas9 protein.

또한, 본 발명의 유전자 교정용 벡터는 cas9 단백질를 암호화하는 유전자를 더 포함하여 가이드 RNA와 cas9 단백질를 동시에 형질도입 하는 것일 수 있다. In addition, the gene editing vector of the present invention may further include a gene encoding a cas9 protein to simultaneously transduce the guide RNA and the cas9 protein.

이하, 실시예를 통하여 본 발명을 더욱 상세히 설명하고자 한다. 이들 실시예는 오로지 본 발명을 예시하기 위한 것으로, 본 발명의 범위가 이들 실시예에 의해 제한되는 것으로 해석되지 않는 것은 당업계에서 통상의 지식을 가진 자에게 있어서 자명할 것이다.Hereinafter, the present invention will be described in more detail through examples. These examples are only for illustrating the present invention, and it will be apparent to those of ordinary skill in the art that the scope of the present invention is not to be construed as being limited by these examples.

[실시예 1] 토마토 꽃가루 발달 관련 유전자 선별[Example 1] Selection of genes related to tomato pollen development

토마토 유래 꽃가루 발달 관련 유전자 중, 하기 표 1의 서열번호 1의 ms1-like 유전자(3085bp, Solyc04g008420) 및 서열번호 2의 ms1035 유전자(1002 bp, Solyc02g079810)를 선별하였다.Among the tomatoes-derived pollen development-related genes, the ms1-like gene (3085bp, Solyc04g008420) of SEQ ID NO: 1 in Table 1 and the ms10 35 gene (1002 bp, Solyc02g079810) of SEQ ID NO: 2 were selected.

유전자 명칭gene name 서열번호SEQ ID NO: 서열order ms1-like
(Solyc04g008420)
ms1-like
(Solyc04g008420)
서열번호 1SEQ ID NO: 1 ATGTCGACTTTAGATCTGAGCGGATCGAAGAAAAGGAAGAGGAATAATAATGAGAGGGTATCATTTAAGTTCAAGAATTTTGGTGAACAAGGGTTTCCTATAGAGTTCATTGGGTGCAATTTTGACCAAAATGTTAAACTTCTTTTGGAATTTGCACAACAAGAAAATGGGAGTATTTGGTCATTTCAATTGGAAGTTCATAGACATCCACCAATGCATGTGTTCCTATTTGTTGTTGAAGAACAAGTTGAATTGTCACTCAATCCTCATTGCAAACATTGTCAATACATAGGTAATATCACTACCGAAAATTATTACAAGTTCACGTGAAATTTAAATTCTAAATCTGTCACGGAAAAAAAAAGAAATTAATAGAACATTTGGAACATATAGTGATTAGTAACTTCATTTGTTAGGTTTGTGTTTGGTGAAATTAAATCAAATACTAAGTGAAATTACTAAAATATAGTACTAAAAAAATTAAATTTGCTTTGCATGACTTTTATGTTATTAATATAAATCAAATTCTCTTAATTTCTTTCGTATATTTACCTTTTCATATTTTAACTTTCTTAATGAAAAACTAGTTATGCCACCGTTTAACTATCGACGTATAAAAGTTAAACTCATCAAAGTACTTATGCATGGCCTCAGGATGGGGCAACAATTTGATGTGCAACAAGAAGTACCATTTTCTATTGGCTTCAAAGGACACAATTGGAGCTTGTGTAGAAGGAGGAAATGGACAAAAATACAAATATAAAACAGATGTTAATAATATTATTGGTGGAGAAATAATTAAAAGTAAGTTAAATTTGATAGAAATAGAAGGTCATATGATGCATGGTGTGTTTCATTCTAATGGTTTTGGGCATTTGATTTGTGTCAATGGATCATTGGAAACTCCTACTTCTTCTGACTTGCCTGGTCACTCAATTATGGACTTTTGGGATCGACTTTGCATTGGACTTCGTGCTAGGTTTGTCATCATCAACTTAATTTACTATTTTCGTTTTATTTTATCTGACGGGGTTTGATTCAACTTGAAATTTGACTAACAAAGAAAATATATATAATTTATGATTTTAAACTTATTAGAACATATTTGTAATCGGGTGCGGAGTTAAAATGCCACAATTGATGAAAGCTGCATACATTATATATACAAGATCAATAAAATTTCATGTAACATAACGATAATTGCTTGTTTTCTTCCTGCGTTTACTTTTTTATATATATTTCGTCTCTACTATCTTTGTAGCTGAAAAAATAGTAGAATAGAAAGTTTAAAAGTTACATTATTTTGAAATACATAAATATGCCTTTCGTTATAGAACATTATAAACAAATATCACATAAAACGAAACAAAAATACACTAGTGTATGTTCAAACTGTTTTGTTAGGAGTAGTGTCATGTTAAACTCTGTGTTCAATCAAGCACACATTGCATAAAACGATACACAAGGAGTATCTTTTATGCTTTTATGCACCCCTTAGCCTTAATCATCGTATTTATCTAAATTATATATCCTTCATTTTCCTTTAAACTTGCACTTAAAGTCATAAATAACTTTCTACTTTTTCAAAAAGTCAACAACTTTAGATTATCAAAATGATTAATATTTGAGATCGAAAACAATAATAATTTCTCTATGTTTTTGAAGGAAAGTAAGCTTAAGAGATATCTCAACAAAGAAAGGGATGGATCTAAGGCTACTCAACACATTAGCCTATGGTGAGCCATGGTTTGGTCGATGGGGTTACAAATTTGGGCGTGGGAGCTTTGGTGTTACACAAGAAACATATCAAAGTGCAATTAATGCCTTACAAAACATGCCATTAGCTTTATTAGCACATCATCATCACCATATAGGGATTATAAATATTAATGAGATATTAATAGTGTTATCAAGGTACCAAATGTTATCTGGTCACTCATTAGTCACACTTTGTGATGCCTTTCATTTCATGTTGGAGCTCAAATCAAGGATCCCAAAGGAAAACAATAATCTTACCTCATGTTATCCAGGGCTATTAGTTGACACAACTTGTAGATGGTCACCTAAACGCGTTGAAATGGCTATTAGGGTTGTTGTGGAAGCCCTAAAAGGGGCTAAATCGCGATGGGTGTCTAGGCAAGAGGTTCGTGATGCTGCTCGTGCTTATATTGGTGATACAGGGTTGCTTGATTTCGTTCTCAAGTCATTAGGGAATCATATTGTTGGTAAGTATCTGGTTCGTCGATGCTTAAATCCAGTGACTAAAGTTTTGGAATATTGTTTAGAGGATATATCTAAAGCATTTCCTAAACAAGATCAAGGTTTTAGGGTCAATGACTCAAAAGGGAAACAACAATACAAAATCACATTGGCGCAACTTATGAAGGACATACATTTCTTGTACAACAATATTCTAAAAGAGCATAAGGGATTAATGTCAAATTATACGGGCGTCTTTGCTACAATCCCAACAGCTTCTAGAATAATCCTAGACACGAAGTACTTCCTCAAGGAATACAGAGAGGTATCAGAGCCAGATACAAGAATTGAACCAGATAAATCCAAGATTTATTGCGCGATTATGTTGGCAATCAAGGATGGATTTGGTGTTGAAGAAAAAGTAATGACCCCATTTGAGTGTTTCTTAATGAGAAAAGATGTGACATTTGATGAGCTAAAAATTGAAGTTGAAAAGGCTTTTGGGGATATTTATTTGGGATTAAGGAACTTTACCACAAGATCAATTAACAACTTGATAAGCCCAATTAGTGGAATAGAATTGGTGTTTAATGTGGTGAAACCAGGAAGCAAGATTGTTTTAGGAGGGGTAATAATGTCAAATAATGATGATATTAATATTATTAATAATGGAGGGATATTTGAAGGAATTAAGAATAATAATATTATTATGGATTGTATTTGTGGGACTAAAGATGAAGATGGTGAAAGGATGATTTGTTGTGATATTTGTGAAGTTTGGCAACACACTAGGTGTGTTAATATACCAAATCATGAAGCAATTCCAGATATATTTCTTTGTAATAAGTGTGAGCAAGATATCTTACAATTTCCTTCATTACCTTAGATGTCGACTTTAGATCTGAGCGGATCGAAGAAAAGGAAGAGGAATAATAATGAGAGGGTATCATTTAAGTTCAAGAATTTTGGTGAACAAGGGTTTCCTATAGAGTTCATTGGGTGCAATTTTGACCAAAATGTTAAACTTCTTTTGGAATTTGCACAACAAGAAAATGGGAGTATTTGGTCATTTCAATTGGAAGTTCATAGACATCCACCAATGCATGTGTTCCTATTTGTTGTTGAAGAACAAGTTGAATTGTCACTCAATCCTCATTGCAAACATTGTCAATACATAGGTAATATCACTACCGAAAATTATTACAAGTTCACGTGAAATTTAAATTCTAAATCTGTCACGGAAAAAAAAAGAAATTAATAGAACATTTGGAACATATAGTGATTAGTAACTTCATTTGTTAGGTTTGTGTTTGGTGAAATTAAATCAAATACTAAGTGAAATTACTAAAATATAGTACTAAAAAAATTAAATTTGCTTTGCATGACTTTTATGTTATTAATATAAATCAAATTCTCTTAATTTCTTTCGTATATTTACCTTTTCATATTTTAACTTTCTTAATGAAAAACTAGTTATGCCACCGTTTAACTATCGACGTATAAAAGTTAAACTCATCAAAGTACTTATGCATGGCCTCAGGATGGGGCAACAATTTGATGTGCAACAAGAAGTACCATTTTCTATTGGCTTCAAAGGACACAATTGGAGCTTGTGTAGAAGGAGGAAATGGACAAAAATACAAATATAAAACAGATGTTAATAATATTATTGGTGGAGAAATAATTAAAAGTAAGTTAAATTTGATAGAAATAGAAGGTCATATGATGCATGGTGTGTTTCATTCTAATGGTTTTGGGCATTTGATTTGTGTCAATGGATCATTGGAAACTCCTACTTCTTCTGACTTGCCTGGTCACTCAATTATGGACTTTTGGGATCGACTTTGCATTGGACTTCGTGCTAGGTTTGTCATCATCAACTTAAT TTACTATTTTCGTTTTATTTTATCTGACGGGGTTTGATTCAACTTGAAATTTGACTAACAAAGAAAATATATATAATTTATGATTTTAAACTTATTAGAACATATTTGTAATCGGGTGCGGAGTTAAAATGCCACAATTGATGAAAGCTGCATACATTATATATACAAGATCAATAAAATTTCATGTAACATAACGATAATTGCTTGTTTTCTTCCTGCGTTTACTTTTTTATATATATTTCGTCTCTACTATCTTTGTAGCTGAAAAAATAGTAGAATAGAAAGTTTAAAAGTTACATTATTTTGAAATACATAAATATGCCTTTCGTTATAGAACATTATAAACAAATATCACATAAAACGAAACAAAAATACACTAGTGTATGTTCAAACTGTTTTGTTAGGAGTAGTGTCATGTTAAACTCTGTGTTCAATCAAGCACACATTGCATAAAACGATACACAAGGAGTATCTTTTATGCTTTTATGCACCCCTTAGCCTTAATCATCGTATTTATCTAAATTATATATCCTTCATTTTCCTTTAAACTTGCACTTAAAGTCATAAATAACTTTCTACTTTTTCAAAAAGTCAACAACTTTAGATTATCAAAATGATTAATATTTGAGATCGAAAACAATAATAATTTCTCTATGTTTTTGAAGGAAAGTAAGCTTAAGAGATATCTCAACAAAGAAAGGGATGGATCTAAGGCTACTCAACACATTAGCCTATGGTGAGCCATGGTTTGGTCGATGGGGTTACAAATTTGGGCGTGGGAGCTTTGGTGTTACACAAGAAACATATCAAAGTGCAATTAATGCCTTACAAAACATGCCATTAGCTTTATTAGCACATCATCATCACCATATAGGGATTATAAATATTAATGAGATATTAATAGTGTTATCAAGGTACCAAATGTTATCTGGTCACTCATTAGTCACACTTTGTGATGCCTTTCATTTCATGTTGGAGCTCAAATCAAGGATCCCAAAGG AAAACAATAATCTTACCTCATGTTATCCAGGGCTATTAGTTGACACAACTTGTAGATGGTCACCTAAACGCGTTGAAATGGCTATTAGGGTTGTTGTGGAAGCCCTAAAAGGGGCTAAATCGCGATGGGTGTCTAGGCAAGAGGTTCGTGATGCTGCTCGTGCTTATATTGGTGATACAGGGTTGCTTGATTTCGTTCTCAAGTCATTAGGGAATCATATTGTTGGTAAGTATCTGGTTCGTCGATGCTTAAATCCAGTGACTAAAGTTTTGGAATATTGTTTAGAGGATATATCTAAAGCATTTCCTAAACAAGATCAAGGTTTTAGGGTCAATGACTCAAAAGGGAAACAACAATACAAAATCACATTGGCGCAACTTATGAAGGACATACATTTCTTGTACAACAATATTCTAAAAGAGCATAAGGGATTAATGTCAAATTATACGGGCGTCTTTGCTACAATCCCAACAGCTTCTAGAATAATCCTAGACACGAAGTACTTCCTCAAGGAATACAGAGAGGTATCAGAGCCAGATACAAGAATTGAACCAGATAAATCCAAGATTTATTGCGCGATTATGTTGGCAATCAAGGATGGATTTGGTGTTGAAGAAAAAGTAATGACCCCATTTGAGTGTTTCTTAATGAGAAAAGATGTGACATTTGATGAGCTAAAAATTGAAGTTGAAAAGGCTTTTGGGGATATTTATTTGGGATTAAGGAACTTTACCACAAGATCAATTAACAACTTGATAAGCCCAATTAGTGGAATAGAATTGGTGTTTAATGTGGTGAAACCAGGAAGCAAGATTGTTTTAGGAGGGGTAATAATGTCAAATAATGATGATATTAATATTATTAATAATGGAGGGATATTTGAAGGAATTAAGAATAATAATATTATTATGGATTGTATTTGTGGGACTAAAGATGAAGATGGTGAAAGGATGATTTGTTGTGATATTTGTGAAGTTTGGCAACACACTAGGTGTGTTAA TATACCAAATCATGAAGCAATTCCAGATATATTTCTTTGTAATAAGTGTGAGCAAGATATCTTACAATTTCCTTCATTACCTTAG
ms1035
(Solyc02g079810)
ms10 35
(Solyc02g079810)
서열번호 2SEQ ID NO: 2 ATGGAATTCCCCAGTACCCCATTTGATAATTCAAACAACTCTGAAGAAAGGGAAGTAGGAAGAAGAACAGATAAAAGGAAGCAAATTGATGGTGAAGTTAAAGAATACAAATCCAAGAACCTTAAGGCTGAGAGAAATAGGCGTCAAAAACTTAGCGAAAGGCTTCTTCAATTACGCTCATTGGTCCCAAACATAACAAATGCAATGAATCAAAAACCTTCATTCTTTACATAGTTTCATAAAGAATGAATTTTTTTAAAAAAAATCTAAAAAAGTTTAAATTCTTGTCTGATTTCAGATGACAAAAGAAACCATAATCACTGACGCCATCACCTACATTAGGGAGCTACAAATGAATGTGGACAACCTAAGTGAGCAGCTTCTTGAAATGGAAGCAACTCAGGGGGAGGAACTGGAGACAAAAAATGAAGAGATTATCGATACTGCAGACGAGATGGGTAAATGGGGCATAGAGGTAGGTAACTTTATGTATAAAACCAAAGTTTCAATCTTTGATATTCTTGAATTATAAGGACAGTAAAACAACTTTGATCTTTGTTTTTCTAAAACAGCCTGAAGTTCAAGTGGCTAACATTGGCCCAACTAAGCTTTGGATAAAAATAGTCTGCCAAAAGAAAAGAGGTGGATTAACTAAACTGATGGAGGCAATGAATGCTCTTGGATTTGATATAAATGACACCAGTGCCACTGCCTCTAAAGGAGCTATTCTTATTACTTCATCTGTGGAGGTAGGAGAAACATATGTTAAAAAAGTAATCTTTTTAGTAGCGATAAAGAAACTATTGCCCGAAAATATCAAGATTTGTAATAGTACAAAAAGGAGATCTTGCTTAGCACCTTGTACTGTGTGTGCTGCAATTATTAGCAACATAAACAATTTATAAATCTTTCTGTGTATTATTTCAGGTGGTTAGAGGTGGACTAACTGAAGCTAATCGAATCAGAGAGATCTTACTGGAGATCATCCACGGAATCTACTAG ATGGAATTCCCCAGTACCCCATTTGATAATTCAAACAACTCTGAAGAAAGGGAAGTAGGAAGAAGAACAGATAAAAGGAAGCAAATTGATGGTGAAGTTAAAGAATACAAATCCAAGAACCTTAAGGCTGAGAGAAATAGGCGTCAAAAACTTAGCGAAAGGCTTCTTCAATTACGCTCATTGGTCCCAAACATAACAAATGCAATGAATCAAAAACCTTCATTCTTTACATAGTTTCATAAAGAATGAATTTTTTTAAAAAAAATCTAAAAAAGTTTAAATTCTTGTCTGATTTCAGATGACAAAAGAAACCATAATCACTGACGCCATCACCTACATTAGGGAGCTACAAATGAATGTGGACAACCTAAGTGAGCAGCTTCTTGAAATGGAAGCAACTCAGGGGGAGGAACTGGAGACAAAAAATGAAGAGATTATCGATACTGCAGACGAGATGGGTAAATGGGGCATAGAGGTAGGTAACTTTATGTATAAAACCAAAGTTTCAATCTTTGATATTCTTGAATTATAAGGACAGTAAAACAACTTTGATCTTTGTTTTTCTAAAACAGCCTGAAGTTCAAGTGGCTAACATTGGCCCAACTAAGCTTTGGATAAAAATAGTCTGCCAAAAGAAAAGAGGTGGATTAACTAAACTGATGGAGGCAATGAATGCTCTTGGATTTGATATAAATGACACCAGTGCCACTGCCTCTAAAGGAGCTATTCTTATTACTTCATCTGTGGAGGTAGGAGAAACATATGTTAAAAAAGTAATCTTTTTAGTAGCGATAAAGAAACTATTGCCCGAAAATATCAAGATTTGTAATAGTACAAAAAGGAGATCTTGCTTAGCACCTTGTACTGTGTGTGCTGCAATTATTAGCAACATAAACAATTTATAAATCTTTCTGTGTATTATTTCAGGTGGTTAGAGGTGGACTAACTGAAGCTAATCGAATCAGAGAGATCTTACTGGAGATCATCCACGGAATCTACT AG

[실시예 2] 토마토 유전자 편집체 제작을 위한 gRNA 선정[Example 2] Selection of gRNA for production of tomato gene edit

토마토 유래 ms1-like 유전자 및 ms1035 유전자를 각각 결손시키기 위한 gRNA(가이드 RNA)를 선정하였다(표 2, 도 1 및 2).Tomato-derived gRNA (guide RNA) for deleting the ms1-like gene and ms10 35 gene, respectively, was selected (Table 2, FIGS. 1 and 2).

gRNA 명칭 gRNA name 서열번호SEQ ID NO: gRNA 서열gRNA sequence g_ms1-likeg_ms1-like 서열번호 3SEQ ID NO: 3 5’-CATTAGCCTATGGTGAGCCA-3’5’-CATTAGCCTATTGGTGAGCCA-3’ g_ms1035 g_ms10 35 서열번호 4SEQ ID NO: 4 5’-ATACAAATCCAAGAACCTTA-3’5’-ATACAAATCCAAGAACCTTA-3’

[실시예 3] CRISPR/Cas9 vector 제작토마토 유전자 편집체 제작[Example 3] CRISPR/Cas9 vector production Tomato gene edit production

상기 표 2의 gRNA를 이용하여 Golden gateway 방법을 이용하여 CRISPR/Cas9 vector를 제조하였다. 벡터의 제조는 상기 제작한 gRNA로 먼저 엔트리 벡터를 만들고, 이를 Cas9 서열(NCBI Reference Sequence: WP_012560673.1) 및 NPTII 서열(GenBank:QGV13007.1)과 함께 cut and ligation 반응을 통해 목표벡터(destination vector)인 pAGM4723에 삽입하였다. 토마토 유전자 편집체 제작을 위한 gRNA, CRISPR/Cas9 벡터 모식도를 도 3에 나타내었다. A CRISPR/Cas9 vector was prepared by using the gRNA of Table 2 above using the Golden gateway method. To prepare the vector, first make an entry vector with the gRNA prepared above, and cut and ligation it with the Cas9 sequence (NCBI Reference Sequence: WP_012560673.1) and NPTII sequence (GenBank: QGV13007.1) to the target vector (destination vector) ) was inserted into pAGM4723. A schematic diagram of a gRNA, CRISPR/Cas9 vector for the production of a tomato gene edit is shown in FIG. 3 .

제작된 CRISPR/Cas9 벡터를 아그로박테리움 투메파시엔스(Agrobacterium tumefaciens) EHA105에 형질전환 후 토마토 자엽에 감염시켜 토마토 유전자 편집체를 제작하고 온실에서 배양하였다. 온실의 온도는 25±2℃이며, 16시간 빛 조건 및 8시간 암 조건의 온실에서 배양하였다.The produced CRISPR/Cas9 vector was transformed into Agrobacterium tumefaciens EHA105 and then infected with tomato cotyledons to produce a tomato gene edit and cultured in a greenhouse. The temperature of the greenhouse was 25±2° C., and cultured in the greenhouse under light conditions for 16 hours and dark conditions for 8 hours.

[실시예 4] 토마토 유전자 편집체 분자생물학적 분석[Example 4] Tomato gene edit molecular biological analysis

온실배양 토마토 형질전환체의 gDNA를 추출하여 ms1_check_F/R로 PCR을 수행하고 증폭된 산물은 pGEM T-easy 벡터에 클로닝하여 염기서열을 분석하였다. 그 결과, ms1-like 유전자는 높은 확률로 유전자 서열에 변이가 일어났다. 구체적으로, ms1-like 유전자에서는 염기 1개가 첨가된 것, 염기 1개가 결손된 것, 그리고 염기 5개가 결손된 것을 확인하였다. The gDNA of the green tomato transformant was extracted, PCR was performed with ms1_check_F/R, and the amplified product was cloned into pGEM T-easy vector and sequenced. As a result, the ms1-like gene had a high probability that the gene sequence was mutated. Specifically, in the ms1-like gene, it was confirmed that one base was added, one base was deleted, and five bases were deleted.

반면, 동일한 방법으로 ms1035_check_F/R 프라이머를 이용하여 증폭한 PCR 산물의 염기서열 분석 결과, ms1035 유전자는 유전자 서열의 변이가 일어나지 않음을 확인하였다.On the other hand, as a result of the nucleotide sequence analysis of the PCR product amplified using the ms10 35_check_F/R primer in the same way, it was confirmed that the gene sequence mutation of the ms10 35 gene did not occur.

이를 통해, 서열번호 3과 동일하거나 상보적인 염기서열로 이루어진 ms1-like 유전자는 토마토 웅성불임 변이체 제조에 유용하게 활용될 수 있음을 확인할 수 있다.Through this, it can be confirmed that the ms1-like gene consisting of the same or complementary nucleotide sequence as SEQ ID NO: 3 can be usefully utilized for preparing tomato male infertility mutants.

<110> REPUBLIC OF KOREA(MANAGEMENT : RURAL DEVELOPMENT ADMINISTRATION) <120> Guide RNA for editing ms1-like gene and use thereof <130> DP20200034 <160> 4 <170> KoPatentIn 3.0 <210> 1 <211> 3085 <212> DNA <213> Artificial Sequence <220> <223> ms1-like gene <400> 1 atgtcgactt tagatctgag cggatcgaag aaaaggaaga ggaataataa tgagagggta 60 tcatttaagt tcaagaattt tggtgaacaa gggtttccta tagagttcat tgggtgcaat 120 tttgaccaaa atgttaaact tcttttggaa tttgcacaac aagaaaatgg gagtatttgg 180 tcatttcaat tggaagttca tagacatcca ccaatgcatg tgttcctatt tgttgttgaa 240 gaacaagttg aattgtcact caatcctcat tgcaaacatt gtcaatacat aggtaatatc 300 actaccgaaa attattacaa gttcacgtga aatttaaatt ctaaatctgt cacggaaaaa 360 aaaagaaatt aatagaacat ttggaacata tagtgattag taacttcatt tgttaggttt 420 gtgtttggtg aaattaaatc aaatactaag tgaaattact aaaatatagt actaaaaaaa 480 ttaaatttgc tttgcatgac ttttatgtta ttaatataaa tcaaattctc ttaatttctt 540 tcgtatattt accttttcat attttaactt tcttaatgaa aaactagtta tgccaccgtt 600 taactatcga cgtataaaag ttaaactcat caaagtactt atgcatggcc tcaggatggg 660 gcaacaattt gatgtgcaac aagaagtacc attttctatt ggcttcaaag gacacaattg 720 gagcttgtgt agaaggagga aatggacaaa aatacaaata taaaacagat gttaataata 780 ttattggtgg agaaataatt aaaagtaagt taaatttgat agaaatagaa ggtcatatga 840 tgcatggtgt gtttcattct aatggttttg ggcatttgat ttgtgtcaat ggatcattgg 900 aaactcctac ttcttctgac ttgcctggtc actcaattat ggacttttgg gatcgacttt 960 gcattggact tcgtgctagg tttgtcatca tcaacttaat ttactatttt cgttttattt 1020 tatctgacgg ggtttgattc aacttgaaat ttgactaaca aagaaaatat atataattta 1080 tgattttaaa cttattagaa catatttgta atcgggtgcg gagttaaaat gccacaattg 1140 atgaaagctg catacattat atatacaaga tcaataaaat ttcatgtaac ataacgataa 1200 ttgcttgttt tcttcctgcg tttacttttt tatatatatt tcgtctctac tatctttgta 1260 gctgaaaaaa tagtagaata gaaagtttaa aagttacatt attttgaaat acataaatat 1320 gcctttcgtt atagaacatt ataaacaaat atcacataaa acgaaacaaa aatacactag 1380 tgtatgttca aactgttttg ttaggagtag tgtcatgtta aactctgtgt tcaatcaagc 1440 acacattgca taaaacgata cacaaggagt atcttttatg cttttatgca ccccttagcc 1500 ttaatcatcg tatttatcta aattatatat ccttcatttt cctttaaact tgcacttaaa 1560 gtcataaata actttctact ttttcaaaaa gtcaacaact ttagattatc aaaatgatta 1620 atatttgaga tcgaaaacaa taataatttc tctatgtttt tgaaggaaag taagcttaag 1680 agatatctca acaaagaaag ggatggatct aaggctactc aacacattag cctatggtga 1740 gccatggttt ggtcgatggg gttacaaatt tgggcgtggg agctttggtg ttacacaaga 1800 aacatatcaa agtgcaatta atgccttaca aaacatgcca ttagctttat tagcacatca 1860 tcatcaccat atagggatta taaatattaa tgagatatta atagtgttat caaggtacca 1920 aatgttatct ggtcactcat tagtcacact ttgtgatgcc tttcatttca tgttggagct 1980 caaatcaagg atcccaaagg aaaacaataa tcttacctca tgttatccag ggctattagt 2040 tgacacaact tgtagatggt cacctaaacg cgttgaaatg gctattaggg ttgttgtgga 2100 agccctaaaa ggggctaaat cgcgatgggt gtctaggcaa gaggttcgtg atgctgctcg 2160 tgcttatatt ggtgatacag ggttgcttga tttcgttctc aagtcattag ggaatcatat 2220 tgttggtaag tatctggttc gtcgatgctt aaatccagtg actaaagttt tggaatattg 2280 tttagaggat atatctaaag catttcctaa acaagatcaa ggttttaggg tcaatgactc 2340 aaaagggaaa caacaataca aaatcacatt ggcgcaactt atgaaggaca tacatttctt 2400 gtacaacaat attctaaaag agcataaggg attaatgtca aattatacgg gcgtctttgc 2460 tacaatccca acagcttcta gaataatcct agacacgaag tacttcctca aggaatacag 2520 agaggtatca gagccagata caagaattga accagataaa tccaagattt attgcgcgat 2580 tatgttggca atcaaggatg gatttggtgt tgaagaaaaa gtaatgaccc catttgagtg 2640 tttcttaatg agaaaagatg tgacatttga tgagctaaaa attgaagttg aaaaggcttt 2700 tggggatatt tatttgggat taaggaactt taccacaaga tcaattaaca acttgataag 2760 cccaattagt ggaatagaat tggtgtttaa tgtggtgaaa ccaggaagca agattgtttt 2820 aggaggggta ataatgtcaa ataatgatga tattaatatt attaataatg gagggatatt 2880 tgaaggaatt aagaataata atattattat ggattgtatt tgtgggacta aagatgaaga 2940 tggtgaaagg atgatttgtt gtgatatttg tgaagtttgg caacacacta ggtgtgttaa 3000 tataccaaat catgaagcaa ttccagatat atttctttgt aataagtgtg agcaagatat 3060 cttacaattt ccttcattac cttag 3085 <210> 2 <211> 1002 <212> DNA <213> Artificial Sequence <220> <223> ms1035 gene <400> 2 atggaattcc ccagtacccc atttgataat tcaaacaact ctgaagaaag ggaagtagga 60 agaagaacag ataaaaggaa gcaaattgat ggtgaagtta aagaatacaa atccaagaac 120 cttaaggctg agagaaatag gcgtcaaaaa cttagcgaaa ggcttcttca attacgctca 180 ttggtcccaa acataacaaa tgcaatgaat caaaaacctt cattctttac atagtttcat 240 aaagaatgaa tttttttaaa aaaaatctaa aaaagtttaa attcttgtct gatttcagat 300 gacaaaagaa accataatca ctgacgccat cacctacatt agggagctac aaatgaatgt 360 ggacaaccta agtgagcagc ttcttgaaat ggaagcaact cagggggagg aactggagac 420 aaaaaatgaa gagattatcg atactgcaga cgagatgggt aaatggggca tagaggtagg 480 taactttatg tataaaacca aagtttcaat ctttgatatt cttgaattat aaggacagta 540 aaacaacttt gatctttgtt tttctaaaac agcctgaagt tcaagtggct aacattggcc 600 caactaagct ttggataaaa atagtctgcc aaaagaaaag aggtggatta actaaactga 660 tggaggcaat gaatgctctt ggatttgata taaatgacac cagtgccact gcctctaaag 720 gagctattct tattacttca tctgtggagg taggagaaac atatgttaaa aaagtaatct 780 ttttagtagc gataaagaaa ctattgcccg aaaatatcaa gatttgtaat agtacaaaaa 840 ggagatcttg cttagcacct tgtactgtgt gtgctgcaat tattagcaac ataaacaatt 900 tataaatctt tctgtgtatt atttcaggtg gttagaggtg gactaactga agctaatcga 960 atcagagaga tcttactgga gatcatccac ggaatctact ag 1002 <210> 3 <211> 20 <212> DNA <213> Artificial Sequence <220> <223> g_ms1-like <400> 3 cattagccta tggtgagcca 20 <210> 4 <211> 20 <212> DNA <213> Artificial Sequence <220> <223> g_ms1035 <400> 4 atacaaatcc aagaacctta 20 <110> REPUBLIC OF KOREA (MANAGEMENT : RURAL DEVELOPMENT ADMINISTRATION) <120> Guide RNA for editing ms1-like gene and use thereof <130> DP20200034 <160> 4 <170> KoPatentIn 3.0 <210> 1 <211> 3085 <212> DNA <213> Artificial Sequence <220> <223> ms1-like gene <400> 1 atgtcgactt tagatctgag cggatcgaag aaaaggaaga ggaataataa tgagagggta 60 tcatttaagt tcaagaattt tggtgaacaa gggtttccta tagagttcat tgggtgcaat 120 tttgaccaaa atgttaaact tcttttggaa tttgcacaac aagaaaatgg gagtatttgg 180 tcatttcaat tggaagttca tagacatcca ccaatgcatg tgttcctatt tgttgttgaa 240 gaacaagttg aattgtcact caatcctcat tgcaaacatt gtcaatacat aggtaatatc 300 actaccgaaa attattacaa gttcacgtga aatttaaatt ctaaatctgt cacggaaaaa 360 aaaagaaatt aatagaacat ttggaacata tagtgattag taacttcatt tgttaggttt 420 gtgtttggtg aaattaaatc aaatactaag tgaaattact aaaatatagt actaaaaaaa 480 ttaaatttgc tttgcatgac ttttatgtta ttaatataaa tcaaattctc ttaatttctt 540 tcgtatattt accttttcat attttaactt tcttaatgaa aaactagtta tgccaccgtt 600 taactatcga cgtataaaag ttaaactcat caaagtactt atgcatggcc tcaggatggg 660 gcaacaattt gatgtgcaac aagaagtacc attttctatt ggcttcaaag gacacaattg 720 gagcttgtgt agaaggagga aatggacaaa aatacaaata taaaacagat gttaataata 780 ttaattggtgg agaaataatt aaaagtaagt taaatttgat agaaatagaa ggtcatatga 840 tgcatggtgt gtttcattct aatggttttg ggcatttgat ttgtgtcaat ggatcattgg 900 aaactcctac ttcttctgac ttgcctggtc actcaattat ggacttttgg gatcgacttt 960 gcattggact tcgtgctagg tttgtcatca tcaacttaat ttactatttt cgttttattt 1020 tatctgacgg ggtttgattc aacttgaaat ttgactaaca aagaaaatat atataattta 1080 tgattttaaa cttattagaa catatttgta atcgggtgcg gagttaaaat gccacaattg 1140 atgaaagctg catacattat atatacaaga tcaataaaat ttcatgtaac ataacgataa 1200 ttgcttgttt tcttcctgcg tttacttttt tatatatatt tcgtctctac tatctttgta 1260 gctgaaaaaa tagtagaata gaaagtttaa aagttacatt attttgaaat acataaatat 1320 gcctttcgtt atagaacatt ataaacaaat atcacataaa acgaaacaaa aatacactag 1380 tgtatgttca aactgttttg ttaggagtag tgtcatgtta aactctgtgt tcaatcaagc 1440 acacattgca taaaacgata cacaaggagt atcttttatg cttttatgca ccccttagcc 1500 ttaatcatcg tatttatcta aattatatat ccttcatttt cctttaaact tgcacttaaa 1560 gtcataaata actttctact ttttcaaaaa gtcaacaact ttagattatc aaaatgatta 1620 atatttgaga tcgaaaacaa taataatttc tctatgtttt tgaaggaaag taagcttaag 1680 agatatctca acaaagaaag ggatggatct aaggctactc aacacattag cctatggtga 1740 gccatggttt ggtcgatggg gttacaaatt tgggcgtggg agctttggtg ttacacaaga 1800 aacatatcaa agtgcaatta atgccttaca aaacatgcca ttagctttat tagcacatca 1860 tcatcaccat atagggatta taaatattaa tgagatatta atagtgttat caaggtacca 1920 aatgttatct ggtcactcat tagtcacact ttgtgatgcc tttcatttca tgttggagct 1980 caaatcaagg atcccaaagg aaaacaataa tcttacctca tgttatccag ggctattagt 2040 tgacacaact tgtagatggt cacctaaacg cgttgaaatg gctattaggg ttgttgtgga 2100 agccctaaaa ggggctaaat cgcgatgggt gtctaggcaa gaggttcgtg atgctgctcg 2160 tgcttatatt ggtgatacag ggttgcttga tttcgttctc aagtcattag ggaatcatat 2220 tgttggtaag tatctggttc gtcgatgctt aaatccagtg actaaagttt tggaatattg 2280 tttagaggat atatctaaag catttcctaa acaagatcaa ggttttaggg tcaatgactc 2340 aaaagggaaa caacaataca aaatcacatt ggcgcaactt atgaaggaca tacatttctt 2400 gtacaacaat attctaaaag agcataaggg attaatgtca aattatacgg gcgtctttgc 2460 tacaatccca acagcttcta gaataatcct agacacgaag tacttcctca aggaatacag 2520 agaggtatca gagccagata caagaattga accagataaa tccaagattt attgcgcgat 2580 tatgttggca atcaaggatg gatttggtgt tgaagaaaaa gtaatgaccc catttgagtg 2640 tttcttaatg agaaaagatg tgacatttga tgagctaaaa attgaagttg aaaaggcttt 2700 tggggatatt tatttgggat taaggaactt taccacaaga tcaattaaca acttgataag 2760 cccaattagt ggaatagaat tggtgtttaa tgtggtgaaa ccaggaagca agattgtttt 2820 aggaggggta ataatgtcaa ataatgatga tattaatatt attaataatg gagggatatt 2880 tgaaggaatt aagaataata atattattat ggattgtatt tgtgggacta aagatgaaga 2940 tggtgaaagg atgatttgtt gtgatatttg tgaagtttgg caacacacta ggtgtgttaa 3000 tataccaaat catgaagcaa ttccagatat atttctttgt aataagtgtg agcaagatat 3060 cttacaattt ccttcattac cttag 3085 <210> 2 <211> 1002 <212> DNA <213> Artificial Sequence <220> <223> ms1035 gene <400> 2 atggaattcc ccagtacccc atttgataat tcaaacaact ctgaagaaag ggaagtagga 60 agaagaacag ataaaaggaa gcaaattgat ggtgaagtta aagaatacaa atccaagaac 120 cttaaggctg agagaaatag gcgtcaaaaa cttagcgaaa ggcttcttca attacgctca 180 ttggtcccaa acataacaaa tgcaatgaat caaaaacctt cattctttac atagtttcat 240 aaagaatgaa tttttttaaa aaaaatctaa aaaagtttaa attcttgtct gatttcagat 300 gacaaaagaa accataatca ctgacgccat cacctacatt agggagctac aaatgaatgt 360 ggacaaccta agtgagcagc ttcttgaaat ggaagcaact cagggggagg aactggagac 420 aaaaaatgaa gagattatcg atactgcaga cgagatgggt aaatggggca tagaggtagg 480 taactttatg tataaaacca aagtttcaat ctttgatatt cttgaattat aaggacagta 540 aaacaacttt gatctttgtt tttctaaaac agcctgaagt tcaagtggct aacattggcc 600 caactaagct ttggataaaa atagtctgcc aaaagaaaag aggtggatta actaaactga 660 tggaggcaat gaatgctctt ggatttgata taaatgacac cagtgccact gcctctaaag 720 gagctattct tattacttca tctgtggagg taggagaaac atatgttaaa aaagtaatct 780 ttttagtagc gataaagaaa ctattgcccg aaaatatcaa gatttgtaat agtacaaaaa 840 ggagatcttg cttagcacct tgtactgtgt gtgctgcaat tattagcaac ataaacaatt 900 tataaatctt tctgtgtatt atttcaggtg gttagaggtg gactaactga agctaatcga 960 atcagagaga tcttactgga gatcatccac ggaatctact ag 1002 <210> 3 <211> 20 <212> DNA <213> Artificial Sequence <220> <223> g_ms1-like <400> 3 cattagccta tggtgagcca 20 <210> 4 <211> 20 <212> DNA <213> Artificial Sequence <220> <223> g_ms1035 <400> 4 atacaaatcc aagaacctta 20

Claims (11)

서열번호 3과 동일하거나 상보적인 염기서열로 이루어진 토마토 유전자 교정용 가이드 RNA. Guide RNA for tomato gene editing consisting of the same or complementary nucleotide sequence as SEQ ID NO: 3. 제1항에 있어서, 상기 토마토 유전자는 서열번호 1로 이루어진 ms1-like 유전자인 것을 특징으로 하는, 가이드 RNA. According to claim 1, wherein the tomato gene is characterized in that the ms1-like gene consisting of SEQ ID NO: 1, guide RNA. 제1항의 가이드 RNA를 포함하는 토마토 유전자 교정용 벡터. A vector for editing tomato gene comprising the guide RNA of claim 1. 제3항에 있어서, 상기 토마토 유전자는 서열번호 1로 이루어진 ms1-like 유전자인 것을 특징으로 하는, 벡터. The vector according to claim 3, wherein the tomato gene is an ms1-like gene consisting of SEQ ID NO: 1. 제3항에 있어서, cas9 단백질을 암호화하는 염기서열을 더 포함하는 것을 특징으로 하는 벡터. The vector according to claim 3, further comprising a nucleotide sequence encoding a cas9 protein. 제1항의 가이드 RNA 또는 제3항의 유전자 교정용 벡터를 포함하는 토마토 유전자 교정용 조성물. A composition for tomato gene editing comprising the guide RNA of claim 1 or the vector for gene editing of claim 3 . 제3항 또는 제5항의 벡터를 형질도입하여 토마토 유전자가 교정된 형질전환 식물체. A transgenic plant in which the tomato gene is corrected by transducing the vector of claim 3 or 5. 제7항에 있어서, 상기 식물체는 웅성불임 변이체인 것을 특징으로 하는, 식물체. The plant according to claim 7, wherein the plant is a male infertility mutant. 서열번호3과 동일하거나 상보적인 염기서열로 이루어진 가이드 RNA를 포함하는 토마토 유전자 교정용 벡터를 준비하는 단계; 및
상기 벡터를 식물체에 형질도입하여 토마토 유전자를 교정하는 단계를 포함하는,
형질전환 식물체의 제조방법.
Preparing a tomato gene correction vector comprising a guide RNA consisting of the same or complementary nucleotide sequence as SEQ ID NO: 3; and
Transducing the vector into a plant comprising the step of correcting the tomato gene,
A method for producing a transgenic plant.
제9항에 있어서, 상기 토마토 유전자는 서열번호 1로 이루어진 ms1-like 유전자인 것을 특징으로 하는, 형질전환 식물체의 제조방법. The method according to claim 9, wherein the tomato gene is an ms1-like gene consisting of SEQ ID NO: 1. 제9항에 있어서, 상기 식물체는 웅성불임 변이체인 것을 특징으로 하는, 형질전환 식물체의 제조방법.The method according to claim 9, wherein the plant is a male sterility mutant.
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KR20100091016A (en) * 2009-02-09 2010-08-18 서울대학교산학협력단 Dna marker to genic male sterile in tomato and use thereof
KR20200032450A (en) * 2018-09-18 2020-03-26 경북대학교 산학협력단 Method for producing male-sterile plant

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KR20100091016A (en) * 2009-02-09 2010-08-18 서울대학교산학협력단 Dna marker to genic male sterile in tomato and use thereof
KR101242434B1 (en) 2009-02-09 2013-03-12 서울대학교산학협력단 DNA marker to genic male sterile in tomato and use thereof
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