KR20010084864A - Amorpha-4,11-diene synthase derived from artemisia annua, gene encoding same, expression vector containing said gene and, e. coli and plant transformed with said vector - Google Patents
Amorpha-4,11-diene synthase derived from artemisia annua, gene encoding same, expression vector containing said gene and, e. coli and plant transformed with said vector Download PDFInfo
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- KR20010084864A KR20010084864A KR1020000010207A KR20000010207A KR20010084864A KR 20010084864 A KR20010084864 A KR 20010084864A KR 1020000010207 A KR1020000010207 A KR 1020000010207A KR 20000010207 A KR20000010207 A KR 20000010207A KR 20010084864 A KR20010084864 A KR 20010084864A
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- 108010022380 Amorpha-4,11-diene synthase Proteins 0.000 title description 2
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Classifications
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- F—MECHANICAL ENGINEERING; LIGHTING; HEATING; WEAPONS; BLASTING
- F16—ENGINEERING ELEMENTS AND UNITS; GENERAL MEASURES FOR PRODUCING AND MAINTAINING EFFECTIVE FUNCTIONING OF MACHINES OR INSTALLATIONS; THERMAL INSULATION IN GENERAL
- F16B—DEVICES FOR FASTENING OR SECURING CONSTRUCTIONAL ELEMENTS OR MACHINE PARTS TOGETHER, e.g. NAILS, BOLTS, CIRCLIPS, CLAMPS, CLIPS OR WEDGES; JOINTS OR JOINTING
- F16B25/00—Screws that cut thread in the body into which they are screwed, e.g. wood screws
- F16B25/10—Screws performing an additional function to thread-forming, e.g. drill screws or self-piercing screws
- F16B25/103—Screws performing an additional function to thread-forming, e.g. drill screws or self-piercing screws by means of a drilling screw-point, i.e. with a cutting and material removing action
-
- F—MECHANICAL ENGINEERING; LIGHTING; HEATING; WEAPONS; BLASTING
- F16—ENGINEERING ELEMENTS AND UNITS; GENERAL MEASURES FOR PRODUCING AND MAINTAINING EFFECTIVE FUNCTIONING OF MACHINES OR INSTALLATIONS; THERMAL INSULATION IN GENERAL
- F16B—DEVICES FOR FASTENING OR SECURING CONSTRUCTIONAL ELEMENTS OR MACHINE PARTS TOGETHER, e.g. NAILS, BOLTS, CIRCLIPS, CLAMPS, CLIPS OR WEDGES; JOINTS OR JOINTING
- F16B33/00—Features common to bolt and nut
- F16B33/008—Corrosion preventing means
-
- F—MECHANICAL ENGINEERING; LIGHTING; HEATING; WEAPONS; BLASTING
- F16—ENGINEERING ELEMENTS AND UNITS; GENERAL MEASURES FOR PRODUCING AND MAINTAINING EFFECTIVE FUNCTIONING OF MACHINES OR INSTALLATIONS; THERMAL INSULATION IN GENERAL
- F16B—DEVICES FOR FASTENING OR SECURING CONSTRUCTIONAL ELEMENTS OR MACHINE PARTS TOGETHER, e.g. NAILS, BOLTS, CIRCLIPS, CLAMPS, CLIPS OR WEDGES; JOINTS OR JOINTING
- F16B35/00—Screw-bolts; Stay-bolts; Screw-threaded studs; Screws; Set screws
- F16B35/04—Screw-bolts; Stay-bolts; Screw-threaded studs; Screws; Set screws with specially-shaped head or shaft in order to fix the bolt on or in an object
- F16B35/041—Specially-shaped shafts
Landscapes
- Engineering & Computer Science (AREA)
- General Engineering & Computer Science (AREA)
- Mechanical Engineering (AREA)
- Enzymes And Modification Thereof (AREA)
Abstract
Description
본 발명은 개똥쑥(Artemisia annua)의 아모파-4,11-디엔 합성효소, 이를 코딩하는 유전자, 이 유전자를 포함하는 발현벡터 및, 이 발현벡터로 형질전환된 대장균 및 식물체에 관한 것이다.The present invention relates to amopa-4,11-diene synthase of Artemisia annua , a gene encoding the same, an expression vector comprising the gene, and E. coli and plants transformed with the expression vector.
아테미시닌(Artemisinin)은 개똥쑥(Artemisia annua) 등의 식물로부터 분리된 강력한 항말라리아 물질로서, 아모판(amorphane) 형태의 세스퀴테르펜 엔도퍼옥사이드(sesquiterpene endoperoxide)이다. 특히 아테미시닌의 항말라리아 활성은 기타 항말라리아제를 사용한 치료가 불가능한 경우 더욱 치명적인 말라리아 원충(Plasmodium falciparum)에 작용하므로 매우 유용하다.Artemisinin is a powerful antimalarial substance isolated from plants such as Artemisia annua , and is sesquiterpene endoperoxide in the form of amorphane. In particular, the antimalarial activity of atemisinin is very useful because it acts on the more lethal malaria parasite ( Plasmodium falciparum ) when treatment with other antimalarial agents is impossible.
이러한 유용성을 갖는 아테미시닌은 주로 이를 생산하는 개똥쑥 등의 식물로부터 추출되어 왔는데, 이 식물은 아시아 지역에만 자생하고 있어 이로부터 아테미시닌의 대량 추출은 매우 제한되어 왔다.Atemisinin having such a utility has been mainly extracted from plants such as firewood, which produces it. This plant is native only to Asia, so mass extraction of atemisinin has been very limited.
이러한 문제점을 해결하기 위해 개똥쑥의 세포 배양을 이용한 아테미시닌의대량 생산이 시도되었으나, 이 방법으로도 상업적으로 충분한 수준의 아테미시닌을 생산하지 못한 실정이다.In order to solve this problem, mass production of atemisinin using cell culture of firefly was attempted, but even this method failed to produce commercially sufficient levels of atemisinin.
아테미시닌의 대량 생산을 위한 새로운 대안으로, 아테미시닌의 생합성 경로와 대사 기구를 이용한 아테미시닌의 대량 생산 방법이 기대되고 있다.As a new alternative for the mass production of atemisinin, a method for mass production of atemisinin using biosynthetic pathways and metabolic mechanisms of atemisinin is expected.
아테미니신의 생합성 경로는 아직 정확히 규명되지 않았으나, 이 경로의 첫 번째 단계는 도 1에 도시된 바와 같이 파니실 디포스페이트(farnesyl diphosphate; FDP)가 세스퀴테르펜 사이클레이즈(sesquiterpene cyclase)에 의해 고리화 반응하여 세스퀴테르펜의 일종인 아모파-4,11-디엔을 형성하는 과정으로 알려지고 있다. 최근 FDP의 고리화 반응을 매개하는 세스퀴테르펜 사이클레이즈로서 아모파-4,11-디엔 합성효소(amorpha-4,11-diene synthase)가 개똥쑥으로부터 부분정제된 바 있으나(Bouwmeester, H.J. et al.,Phytochemistry 52, 843-854 (1999)), 이 효소의 유전자는 아직까지 규명되지 못했다.The biosynthetic pathway of atemisin has not yet been accurately defined, but the first step in this pathway is that farnesyl diphosphate (FDP) is cyclized by sesquiterpene cyclase as shown in FIG. It is known to react to form amopa-4,11-diene which is a kind of sesquiterpene. Recently, amorpha-4,11-diene synthase was partially purified from firewood as a sesquiterpene cyclase that mediates the cyclization of FDP (Bouwmeester, HJ et al. , Phytochemistry 52 , 843-854 (1999)), the gene of this enzyme has not yet been identified.
한편, 현재까지 다양한 세스퀴테르펜 사이클레이즈(sesquiterpene cyclase)들이 보고되었는데, 예를 들어 담배(Nicotian tabacum)와 고추(Capsicum annuum) 유래의 5-에피-아리스톨로켄 합성효소(5-epi-aristolochene synthase)(Facchini, P. J. et al.,Proc. Natl. Acad. Sci. USA. 89, 11088-11092 (1992); 및 Back, K. et al.,Plant Cell Physiol. 39, 899-904 (1998)), 사리풀(Hyoscyamus muticus)과 감자(Solanum tuberosum) 유래의 베티스피라디엔 합성효소(vetispiradiene synthase)(Back, K. et al.,J. Biol. Chem. 270, 7375-7381 (1995); 및 Yoshioka, H. et al.,Plant Cell Physiol. 40, 993-998 (1999)), 목화(Cossypium arboreum)유래의 (+)-δ-카디넨 합성효소((+)-δ-cadinene synthase)(Chen, X.Y. et al.,Arch. Biochem. Biophys. 324, 255-266 (1995)), 토마토(Lycopersicon esculentumcv. VFNT Cherry tomato) 유래의 게마크렌 C 합성효소(germacrene C synthase)(Colby, S.M. et al.Proc. Natl. Acad. Sci. USA. 95, 2216-2221 (1998)) 등이 있다. 이 효소들은 아미노산 서열상에서 40 % 정도로 비교적 높은 일치도를 보인다.Meanwhile, various sesquiterpene cyclases have been reported so far, for example, 5- epi- aristolochene synthase from Nicotian tabacum and Capsicum annuum . (Facchini, PJ et al., Proc. Natl. Acad. Sci. USA. 89 , 11088-11092 (1992); and Back, K. et al., Plant Cell Physiol. 39 , 899-904 (1998)) , Vetispiradiene synthase from Hyoscyamus muticus and potato ( Solanum tuberosum ) (Back, K. et al., J. Biol. Chem. 270 , 7375-7381 (1995); and Yoshioka, H. et al., Plant Cell Physiol. 40 , 993-998 (1999)), (+)-δ-cardinene synthase ((+)-δ-cadinene synthase) derived from Cossypium arboreum (Chen, XY et al., Arch. Biochem. Biophys. 324 , 255-266 (1995)), germacrene C synthase (Colby, SM et al) derived from Lycopersicon esculentum cv.VFNT Cherry tomato . Proc. Natl. Acad. Sci . USA. 95, 2216-222 1 (1998)). These enzymes show a relatively high consensus of about 40% on the amino acid sequence.
최근 개똥쑥에서 세스퀴테르펜 합성효소와는 다른 테르펜 합성효소로서 모노테르펜 사이클레이즈의 하나인 (3R)-리날룰 합성 효소((3R)-linalool synthase; Jia, J.-W. et al.,Arch. Biochem. Biophys. 372, 143-149 (1999))와 세스퀴테르펜 사이클레이즈의 하나인 에피-세드롤(epi-cedrol) 사이클레이즈가 보고된 바 있다(Mercke, P. et al.,Arch. Biochem. Biophys. 369, 213-222 (1999); 및 Hua, L. et al.,Arch. Biochem. Biophys. 369, 208-212 (1999)).Recently, (3R) -linalool synthase, one of the monoterpene cyclases, is a terpene synthase different from sesquiterpene synthase in J., Jia, J.-W. et al. Arch.Biochem.Biophys. 372 , 143-149 (1999)) and epi- cedrol cycleases, one of the sesquiterpene cycleases (Mercke, P. et al., Arch) . Biochem Biophys. 369 , 213-222 (1999); and Hua, L. et al., Arch. Biochem. Biophys. 369 , 208-212 (1999).
따라서, 본 발명의 목적은 개똥쑥의 아모파-4,11-디엔 합성효소를 제공하는 데 있다.Accordingly, an object of the present invention is to provide amopa-4,11-diene synthase of firewood.
본 발명의 다른 목적은 상기 아모파-4,11-디엔 합성효소를 코딩하는 유전자를 제공하는 데 있다.Another object of the present invention to provide a gene encoding the Amopa-4,11-diene synthase.
본 발명의 또 다른 목적은 상기 유전자를 포함하는 발현 벡터를 제공하는 데 있다.It is another object of the present invention to provide an expression vector comprising the gene.
본 발명의 또 다른 목적은 상기 벡터로 형질전환된 대장균 및 식물체를 제공하는 데 있다.Still another object of the present invention is to provide an E. coli and plant transformed with the vector.
도 1은 아모파-4,11-디엔의 합성 반응의 모식도이다.1 is a schematic diagram of a synthesis reaction of amopa-4,11-diene.
도 2는 아모파-4,11-디엔 합성효소의 부분 유전자를 증폭하기 위한 PCR의 반응물을 1.0 % 아가로스 젤에 전기영동한 결과이다.Figure 2 shows the results of electrophoresis on a 1.0% agarose gel of the reaction of the PCR to amplify the partial gene of amopa-4,11-diene synthase.
도 3은 아모파-4,11-디엔 합성효소의 부분 유전자의 노던 블랏 결과이다.3 shows Northern blot results of partial genes of amopa-4,11-diene synthase.
도 4는 아모파-4,11-디엔 합성효소의 부분 유전자의 서던 블랏 결과이다.4 shows Southern blot results of partial genes of amopa-4,11-diene synthase.
도 5a 및 5b는 각각 아모파-4,11-디엔 합성효소의 전장(full length) 유전자를 증폭하기 위한 3'-RACE의 산물과 5'-RACE의 산물을 1.0 % 아가로스 겔에 전기영동한 결과이다.5A and 5B show electrophoresis of the product of 3'-RACE and the product of 5'-RACE on 1.0% agarose gel to amplify the full length gene of amopa-4,11-diene synthase, respectively. The result is.
도 6은 아모파-4,11-디엔 합성효소의 아미노산 서열을 다른 세스퀴테르펜 사이클레이즈들과 비교 배열한 결과이다.Figure 6 shows the results of comparing and arranging the amino acid sequence of amopa-4,11-diene synthase with other sesquiterpene cycles.
도 7은 아모파-4,11-디엔 합성효소의 전장 유전자를 증폭하기 위한 PCR의 반응 산물을 전기영동한 결과이다.Figure 7 shows the results of electrophoresis of the reaction product of PCR to amplify the full-length gene of amopa-4,11-diene synthase.
도 8a는 효소 반응물의 가스 크로마토그래피 스펙트럼이고, 도 8b는 머무름 시간(retension time) 9.3 분에 얻은 효소 반응물의 질량 스펙트럼이며, 8c는 표준 아모파-4,11-디엔의 질량 스펙트럼이다.FIG. 8A is a gas chromatography spectrum of the enzyme reactant, FIG. 8B is a mass spectrum of the enzyme reactant obtained at 9.3 minutes of retention time, and 8c is a mass spectrum of standard Amopa-4,11-diene.
상기 목적에 따라, 본 발명에서는 서열번호: 2의 아미노산 서열을 갖는, 개똥쑥(Artemisia annua)의 아모파-4,11-디엔 합성효소(armopha-4,11-diene synthase) 및 상기 효소와 실질적으로 동일한 효소 활성을 갖는 폴리펩티드를 제공한다.In accordance with the above object, in the present invention, Amopha-4,11-diene synthase of Artemisia annua having the amino acid sequence of SEQ ID NO: 2 and substantially the enzyme To provide a polypeptide having the same enzymatic activity.
상기 다른 목적에 따라, 본 발명에서는 상기 아모파-4,11-디엔 합성효소 및 이와 실질적으로 동일한 활성을 갖는 폴리펩티드를 코딩하는 유전자를 제공한다.According to another object, the present invention provides a gene encoding the amopa-4,11-diene synthase and a polypeptide having substantially the same activity.
상기 또 다른 목적에 따라, 본 발명에서는 상기 유전자를 포함하는 발현 벡터를 제공한다.According to another object, the present invention provides an expression vector comprising the gene.
상기 또 다른 목적에 따라, 본 발명에서는 상기 발현 벡터로 형질전환된 대장균을 제공한다.According to another object, the present invention provides E. coli transformed with the expression vector.
상기 또 다른 목적에 따라, 본 발명에서는 상기 발현 벡터로 형질전환된 식물체를 제공한다.In accordance with another object, the present invention provides a plant transformed with the expression vector.
이하 본 발명을 더욱 상세히 설명한다.Hereinafter, the present invention will be described in more detail.
본 발명의 아모파-4,11-디엔 합성효소는 FDP를 기질로 사용하여 고리화 반응시킴으로써 아모파-4,11-디엔을 합성한다. 이 효소는 서열번호: 2의 아미노산 서열을 가지며, 실질적으로 동일한 효소 활성을 갖는 범위내에서 그 아미노산 서열을적절히 변형시킬 수 있다. 서열번호: 2의 폴리펩티드는, 546 개의 아미노산 잔기로 구성되고, pI 값은 5.59이고 Mw 값은 63.9 kDa이다. 특히 이 폴리펩티드의 오픈 리딩 프레임은 플라스티드 표적 서열(plastid targeting sequence)을 포함하지 않는데, 이것은 이 효소가 원형질 부위에 광범위하게 분포함을 암시한다(Bohlmann, J. et al.,Proc. Natl. Acad. Sci. USA. 95, 4126-4133 (1998); 및 McGarvey, D.J. et al.,Plant Cell 7, 1015-1026 (1995)). 서열번호: 2와 실질적으로 동일한 효소 활성을 갖는 폴리펩티드는 바람직하게는 80% 이상의 효소 활성을 가지며 더욱 바람직하게는 90% 이상의 효소 활성을 가진다.The amopa-4,11-diene synthase of the present invention synthesizes amopa-4,11-diene by cyclization using FDP as a substrate. This enzyme has the amino acid sequence of SEQ ID NO: 2 and can appropriately modify its amino acid sequence within a range having substantially the same enzyme activity. The polypeptide of SEQ ID NO: 2 consists of 546 amino acid residues, has a pi value of 5.59 and a Mw value of 63.9 kDa. In particular, the open reading frame of this polypeptide does not include a plastid targeting sequence, suggesting that this enzyme is widely distributed at the plasma site (Bohlmann, J. et al., Proc. Natl. Acad). . Sci USA 95, 4126-4133 (1998 );... and McGarvey, DJ et al, Plant Cell 7, 1015-1026 (1995)). A polypeptide having an enzymatic activity substantially identical to SEQ ID NO: 2 preferably has at least 80% enzymatic activity and more preferably at least 90% enzymatic activity.
특히, X-선 결정(X-ray crystallography)에 의해 구조가 알려진 담배 에피-아리스톨로켄 합성 효소(Starks, C.M. et al.,Science277, 1815-1820 (1997))에서 활성 부위 나선 루프(helical loop)의 뚜껑(lid)을 유지하는 Trp273과 Tyr527이 본 발명의 효소에서도 Trp271과 Phe526으로 보존되어 있다. 따라서, Trp271의 인돌 고리의 친핵성이 고리화 반응의 중간체 카르보 양이온을 안정화시키며, 고리가 닫힐 때 Arg10과 Arg440의 고밀도의 양전하가 DDXXD 금속 결합 모티프에 결합한 Mg2+의 도움으로 기질 FDP의 이온화를 도와줄 것으로 사료된다. 또한 세스퀴테르펜 합성효소에서 일반적인 Arg10-Pro11쌍 모티프도 잘 보존되어 있으며, 촉매를 담당하는 아미노산 잔기도 Asp444, Tyr520, Asp524로 보존되어 있다.In particular, the active site helix loops in tobacco epi-aristologen synthase (Starks, CM et al., Science 277, 1815-1820 (1997)), whose structure is known by X-ray crystallography. Trp 273 and Tyr 527 , which hold the lid of the loop, are also conserved as Trp 271 and Phe 526 in the enzyme of the present invention. Thus, the nucleophilic sikimyeo of the indole ring of Trp 271 to stabilize the intermediate carbonyl cation of the cyclization, the substrate 10 with Arg and the assistance of Mg 2+ has a high density positive charge of Arg 440 combines the DDXXD metal binding motif when the ring is closed It is thought to help the ionization of FDP. In addition, the Arg 10 -Pro 11 pair motif, which is common in sesquiterpene synthase, is well preserved, and the amino acid residues responsible for the catalyst are also preserved as Asp 444 , Tyr 520 , and Asp 524 .
상기 효소의 아미노산 서열은 다른 세스퀴테르펜 합성효소들과 높은 일치도를 보이며, 특히 담배 5-에피-아리스톨로켄 합성효소와 36 %, 목화 (+)-δ-카디넨 합성효소와 41 %의 일치도를 보인다. 또한 상기 효소의 아미노산 서열은, 개똥쑥에서 분리된 다른 테르펜 합성효소인 에피-세드롤 사이클레이즈와 51 %의 일치도를 보이며, 모노테르펜 합성효소의 하나인 (3R)-리날룰 합성 효소와는 27 %의 낮은 일치도를 보인다.The amino acid sequence of the enzyme shows high concordance with other sesquiterpene synthetases, particularly 36% with tobacco 5-epi-aristologen synthase and 41% with cotton (+)-δ-cardinene synthase. Seems. In addition, the amino acid sequence of the enzyme showed 51% concordance with other terpene synthase, Epi-cedrol cyclase, isolated from firefly, and with (3R) -linalul synthase, one of the monoterpene synthase. Low agreement of%.
또한 본 발명의 아모파-4,11-디엔 합성효소 및 실질적으로 동일한 활성을 갖는 폴리펩티드를 코딩하는 유전자는 예를 들면 서열번호: 1의 염기서열을 가지며 실질적으로 동일한 효소를 코딩하는 범위 내에서 그 염기서열을 적절히 변형시킬 수 있다. 서열번호: 1의 유전자는, 개똥쑥에서 분리된 아모파-4,11-디엔 합성효소의 전장(full length) cDNA 유전자이다. 서열번호: 1의 유전자는 1641 bp 크기의 오픈 리딩 프레임, 33 bp 크기의 5'-비번역 말단 및 432 bp 크기의 3'-비번역 말단으로 이루어져 있다. 또한 5'-비번역 말단부의 27부터 37까지의 영역에는 식물에서 번역 개시를 위한 보존된 염기서열 GAAAATCATGT가 있고, 3'-비번역 말단부의 1778부터 1786까지의 영역에는 전형적인 폴리아데닌 신호 AATAAT/A가 2 회 반복되어 있다. 또한 오픈 리딩 프레임 상에 종료 코돈 TGA가 있다. 서열번호: 1과실질적으로 동일한 효소를 코딩하는 유전자는 바람직하게는 서열번호: 1의 염기서열와 80 % 이상의 상동성을 가지며 더욱 바람직하게는 90 % 이상의 상동성을 가진다.In addition, the gene encoding the amopa-4,11-diene synthetase of the present invention and a polypeptide having substantially the same activity, for example, has a nucleotide sequence of SEQ ID NO: 1 and is within a range encoding a substantially identical enzyme. The base sequence can be appropriately modified. The gene of SEQ ID NO: 1 is the full length cDNA gene of amopa-4,11-diene synthase isolated from firefly. The gene of SEQ ID NO: 1 consists of an open reading frame of 1641 bp, a 5'-untranslated end of 33 bp, and a 3'-untranslated end of 432 bp. There is also a conserved base sequence GAAAATCATGT in the region from 27 to 37 in the 5'-untranslated terminus, and the typical polyadenine signal AATAAT / A in the region from 1778 to 1786 at the 3'-untranslated terminus. Is repeated twice. There is also an end codon TGA on the open reading frame. The gene encoding the enzyme substantially identical to SEQ ID NO: 1 preferably has at least 80% homology with the nucleotide sequence of SEQ ID NO: 1 and more preferably at least 90% homology.
서열번호: 2의 아미노산 서열 및 서열번호: 1의 염기서열을 GenBank/EMBL 데이터베이스에 등록번호 제AJ251751호로 등록하였다.The amino acid sequence of SEQ ID NO: 2 and the nucleotide sequence of SEQ ID NO: 1 were registered in the GenBank / EMBL database under accession number AJ251751.
본 발명의 유전자는 서열번호: 1의 염기서열 정보를 토대로 통상적인 방법에따라 스크린 및 클로닝하여 얻을 수 있는데, 예를 들어 개똥쑥의 어린 잎으로부터 추출한 mRNA를 주형으로 하여 cDNA를 만든 후 프라이머 START(서열번호: 3) 및 STOP(서열번호: 4)를 사용하여 중합효소 연쇄 반응(Poylmerase Chain Reaction, PCR)을 수행함으로써 쉽게 얻을 수 있다.The gene of the present invention can be obtained by screening and cloning according to a conventional method based on the nucleotide sequence information of SEQ ID NO: 1, for example, after making cDNA using mRNA extracted from young leaves of firefly as a template, the primer START ( Easily obtained by performing a polymerase chain reaction (PCR) using SEQ ID NO: 3) and STOP (SEQ ID NO: 4).
본 발명의 벡터는 상기 유전자를 통상적인 방법에 따라 적절한 발현 벡터에 삽입하여 얻을 수 있다. 이러한 벡터로는 상기 유전자를 세균 또는 식물에서 발현할 수 있는 것으로 대표적인 예로는 벡터 pkcs12를 들 수 있으나 이에 한정되지 않는다.The vector of the present invention can be obtained by inserting the gene into an appropriate expression vector according to a conventional method. As such a vector, the gene may be expressed in a bacterium or a plant, and representative examples thereof include a vector pkcs12, but are not limited thereto.
본 발명의 형질전환 대장균은 상기 발현벡터를 통상적인 방법에 따라 형질전환시켜 얻을 수 있다. 이러한 형질전환 대장균의 대표적인 예로는 생명공학연구소 부설 유전자 은행에 2000년 2월 18일자 기탁번호 제 KCTC 0739BP 호로 기탁된, 발현벡터 pkcs12를 포함하는 대장균 BL21(DE3)/pLysS를 들 수 있으나, 이에 한정되지 않는다.The transformed E. coli of the present invention can be obtained by transforming the expression vector according to a conventional method. Representative examples of the transformed Escherichia coli include E. coli BL21 (DE3) / pLysS containing the expression vector pkcs12, deposited with the KCTC 0739BP dated February 18, 2000, to the Gene Bank of Biotechnology Research Institute. It doesn't work.
본 발명의 형질전환 식물체는 통상적인 방법에 따라 상기 발현벡터를 식물 세포에 도입한 후 이 세포의 분화를 적절하게 유도하여 식물체로 재배함으로써 얻을 수 있다. 대표적인 식물 세포로의 유전자 도입 방법의 예로는, 아그로박테리움 투메파시엔스(Agrobacterium tumefaciens)와 적절한 Ti 벡터를 이용한 방법, 폴리에틸렌글리콜(PEG)을 이용한 방법, 입자총(biolistic) 방법, 미세주입(microinjection) 방법 등을 들 수 있으나, 이에 한정되지 않는다. 대표적인 세포의 분화 유도 방법은 식물 호르몬 2,4-D와 벤질아데닌을 처리하는 것이나, 이에 한정되지 않는다.The transgenic plant of the present invention can be obtained by introducing the expression vector into a plant cell according to a conventional method, and then cultivating the plant by inducing differentiation of the cell as appropriate. Examples of gene transduction into representative plant cells include Agrobacterium tumefaciens and appropriate Ti vectors, polyethylene glycol (PEG), biolistic, microinjection ) Method, etc., but is not limited thereto. Representative methods for inducing differentiation of cells include, but are not limited to, treatment of plant hormones 2,4-D and benzyladenin.
이하 본 발명을 하기 실시예에 의하여 더욱 상세하게 설명하고자 한다. 단, 하기 실시예는 본 발명을 예시하기 위한 것일 뿐, 본 발명의 범위가 이들만으로 한정되는 것은 아니다.Hereinafter, the present invention will be described in more detail with reference to the following examples. However, the following examples are only for illustrating the present invention, and the scope of the present invention is not limited thereto.
하기 참조예 및 실시예에 사용된 개똥쑥(Artemisia annua)의 잎은 서울대학교 농업생명과학대학에서 재배한 것을 1999년 3월에 수확한 것이다.The leaves of Artemisia annua used in the following Reference Examples and Examples were harvested in March 1999 from cultivation at the College of Agricultural and Life Sciences, Seoul National University.
참조예 1: 개똥쑥의 게놈 DNA 분리Reference Example 1: Isolation of Genomic DNA from Firefly
개똥쑥(Artemisia annua)의 게놈 DNA를 얻기 위해, 문헌(Shure, M. et al.,Cell35, 225-233 (1983))의 방법에 따라 개똥쑥의 어린잎 1g을 5㎖의 추출 완충액(7 M 우레아, 0.35 M NaCl, 50 mM Tris/pH 8.0, 20 mM EDTA, 1% sarkosyl, 0.6% SDS)중에서 균질화하여 게놈 DNA를 분리하였다.In order to obtain genomic DNA of Artemisia annua , 1 g of young leaves of M. Fructus were extracted in 5 ml of extraction buffer (Shure, M. et al., Cell 35, 225-233 (1983)). Genomic DNA was isolated by homogenization in 7 M urea, 0.35 M NaCl, 50 mM Tris / pH 8.0, 20 mM EDTA, 1% sarkosyl, 0.6% SDS).
참조예 2: 개똥쑥 잎의 mRNA 분리Reference Example 2: mRNA Isolation from the Leaves
개똥쑥(Artemisia annua) 잎의 mRNA를 얻기 위해, 문헌(Sambrook, J. et al., Molecular cloning: A laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press. (1989))의 방법에 따라 구아니딘 이소시아네이트를 사용하여 총 RNA를 추출한 후, 이로부터 폴리트랙 mRNA 분리 시스템 II(PolyATract mRNA Isolation system III, Promega, Madison, WI)를 사용하여 폴리아데닐화된 mRNA를 분리하였다.To obtain mRNA of Artemisia annua leaves, guanidine isocyanate was prepared according to the method of Sambrook, J. et al., Molecular cloning: A laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press. (1989). After total RNA was extracted using the polytrack mRNA isolation system II (PolyATract mRNA Isolation system III, Promega, Madison, WI) to polyadenylation mRNA was isolated.
참조예 3: 아모파-4,11-디엔의 합성Reference Example 3 Synthesis of Amopa-4,11-diene
문헌(Kim, S.U. et al.J. Nat. Prod. 56, 859-863 (1993))의 방법에 따라개똥쑥(건조질량 500g)의 메탄올 추출액으로부터 아테미신산(artemisinic acid) 1.5 g을 분리하였다. 이어서 아테미신산을 공지된 방법(Laemmli, U.K.Nature 227, 680-685 (1970))에 따라 디이소부틸알루미늄 하이드라이드를 사용하여 알코올로 환원시켰다. 이 물질을 공지된 방법(Daniewski, A.R. et al.,J. Org. Chem. 47, 2993-2995 (1982))에 따라p-톨루엔설포닐 클로라이드를 사용하여 토실화시킨 후, 리튬알루미늄 하이드라이드를 사용하여 아모파-4,11-디엔으로 환원시켰다.According to the method of Kim, SU et al. J. Nat. Prod. 56 , 859-863 (1993), 1.5 g of artemisinic acid was isolated from the methanol extract of Gadfly (500 g of dry mass). . Artemisinic acid was then reduced to alcohol using diisobutylaluminum hydride according to a known method (Laemmli, UK Nature 227 , 680-685 (1970)). This material was tosylated with p -toluenesulfonyl chloride according to known methods (Daniewski, AR et al., J. Org. Chem. 47 , 2993-2995 (1982)), followed by lithium aluminum hydride. Reduced to amopa-4,11-diene.
반응물로 박막 크로마토그래피(preparative argentated TLC, 15% AgNO3, 전개용매; 헥산:벤젠:디에틸 에테르=50:50:1, Rf=0.75)를 수행하여 생성물을 분리하였으며, NMR과 MS를 수행하여 생성물의 구조를 확인하였다.The product was separated by thin layer chromatography (preparative argentated TLC, 15% AgNO 3 , developing solvent; hexane: benzene: diethyl ether = 50: 50: 1, R f = 0.75), and NMR and MS were performed. The structure of the product was confirmed.
NMR 스펙트럼은 LA400(1H는 400 MHz,13C는 100 MHz) NMR 분광계(JEOL, Japan)를 사용하였으며, 전자충격 질량 분석(EIMS)은 AX505WA 질량 분광계(JEOL, Japan)를 사용하였다. 분석 결과는 다음과 같다.NMR spectra were LA400 (400 MHz for 1 H, 100 MHz for 13 C) and NMR spectrometer (JEOL, Japan), and AX505WA mass spectrometer (JEOL, Japan) was used for electron impact mass spectrometry (EIMS). The analysis results are as follows.
1H-NMR (400 MHz, CDCl3) δ 0.88 (3H,d, 6.3 Hz, H-15), 0.97 (1H,dddd, 3.4, 10.8, 12.1, 12.7 Hz, H-9ax), 1.27 (1H,dddd, 3.4, 11.0, 12.1, 12.7 Hz, H-8ax), 1.32 (1H,m, H-2), 1.40 (1H,ddd, 3.9, 6.3, 10.8 Hz, H-10), 1.52 (1H,dddd, 1.4, 3.4, 3.4, 12.7 Hz, H-8eq), 1.56 (1H,m, H-2ax), 1.60 (3H,s, H-14), 1.67 (1H,dddd, 3.4, 3.4, 3.6, 12.7 Hz, H-9eq), 1.74 (3H,s, H-12), 1.79 (1H,m, H-1), 1.87 (1H,m, H-3), 1.95 (1H,m, H-7), 1.97 (1H,m, H-3), 1.99(1H,m, H-7), 2.55 (1H,br. s, H-6), 4.64 (1H,s, H-13), 4.87 (1H,s, H-13), 5.06 (1H,s, H-5) OneH-NMR (400 MHz, CDCl3) δ 0.88 (3H,d, 6.3 Hz, H-15), 0.97 (1H,dddd, 3.4, 10.8, 12.1, 12.7 Hz, H-9ax), 1.27 (1H,dddd, 3.4, 11.0, 12.1, 12.7 Hz, H-8ax), 1.32 (1H,m, H-2), 1.40 (1H,ddd, 3.9, 6.3, 10.8 Hz, H-10), 1.52 (1H,dddd, 1.4, 3.4, 3.4, 12.7 Hz, H-8eq), 1.56 (1H,m, H-2ax), 1.60 (3H,s, H-14), 1.67 (1 H,dddd, 3.4, 3.4, 3.6, 12.7 Hz, H-9eq), 1.74 (3H,s, H-12), 1.79 (1H,m, H-1), 1.87 (1H,m, H-3), 1.95 (1H,m, H-7), 1.97 (1 H,m, H-3), 1.99 (1H,m, H-7), 2.55 (1H,br. s, H-6), 4.64 (1H,s, H-13), 4.87 (1 H,s, H-13), 5.06 (1H,s, H-5)
13C-NMR (100 MHz, CDCl3) δ 19.8 (C-15), 22.6 (C-14), 23.6 (C-12), 25.8 (C-8), 26.1 (C-2), 26.5 (C-3), 27.9 (C-10), 35.4 (C-9), 37.6 (C-6), 41.8 (C-1), 47.6 (C-7), 109.8 (C-13), 120.9 (C-5), 134.6 (C-4), 148.0 (C-11) 13 C-NMR (100 MHz, CDCl 3 ) δ 19.8 (C-15), 22.6 (C-14), 23.6 (C-12), 25.8 (C-8), 26.1 (C-2), 26.5 (C -3), 27.9 (C-10), 35.4 (C-9), 37.6 (C-6), 41.8 (C-1), 47.6 (C-7), 109.8 (C-13), 120.9 (C- 5), 134.6 (C-4), 148.0 (C-11)
EI-MS (70eV) m/z 204([M+], 83), 119(100)EI-MS (70 eV) m / z 204 ([M + ], 83), 119 (100)
실시예 1: 개똥쑥 아모파-4,11-디엔 합성효소의 부분 유전자의 클로닝Example 1: Cloning of partial genes of firefly amopa-4,11-diene synthase
(단계 1) PCR(Step 1) PCR
개똥쑥(Artemisia annua)의 아모파-4,11-디엔 합성효소의 부분 유전자를 클로닝하기 위해, 다음과 같이 PCR을 수행하였다.To clone a partial gene of amopa-4,11-diene synthase of Artemisia annua , PCR was performed as follows.
먼저, 4 종류의 식물 세스퀴테르펜 합성효소, 즉, 담배(N. tabacum)의 5-에피-아리스톨로켄 합성효소(Facchini, P. J. et al.,Proc. Natl. Acad. Sci. USA. 89, 11088-11092 (1992)), 사리풀(H. muticus)의 베티스피라디엔 합성효소(Back, K. et al.,J. Biol. Chem. 270, 7375-7381 (1995)), 토마토(L.esculentum)의 게마크렌 C 합성효소(Colby, S.M. et al.Proc. Natl. Acad. Sci. USA. 95, 2216-2221 (1998) 및 목화(G. arboreum)의 (+)-δ-카디넨 합성효소(Chen, X.Y. et al.,Arch. Biochem. Biophys. 324, 255-266 (1995))의 공지된 염기서열을 참조하여 염기서열들간에 보존 영역을 선정하고 이에 해당하는 프라이머 F7(서열번호: 5)과 B9(서열번호: 6)를 제작하였다. 이때 각 프라이머의 5' 말단에는 제한효소Nco I의 절단부위가 포함되도록 고안하였다.First, four kinds of plant sesquiterpene synthase, that is, 5-epi-aristoloken synthase of tobacco ( N. tabacum ) (Facchini, PJ et al., Proc. Natl. Acad. Sci. USA. 89 , 11088-11092 (1992)), Betispyradiene synthase from H. muticus (Back, K. et al., J. Biol. Chem. 270 , 7375-7381 (1995)), tomato (L.esculentum (+)- Δ-cardinene synthesis of Gemacrene C synthase (Colby, SM et al. Proc. Natl. Acad. Sci. USA. 95 , 2216-2221 (1998) and G. arboreum ) Referencing the known base sequence of the enzyme (Chen, XY et al., Arch. Biochem. Biophys. 324 , 255-266 (1995)) selects a conserved region between base sequences and the corresponding primer F7 (SEQ ID NO: 5) and B9 (SEQ ID NO: 6) were prepared, and the 5 'end of each primer was designed to include the cleavage site of restriction enzyme Nco I.
PCR은 참조예 1에서 개똥쑥 게놈 DNA 100 ng, 0.8 mM 씩의 프라이머 F7 및 B9, Taq DNA 중합효소 2 단위(Promega) 및 반응 완충용액(10mM Tris/pH 9.0, 50mM KCl, 2.5 mM MgCl2, 0.2 mM dNTP 및 0.1 % 트리톤 X-100)의 혼합물 100 ㎕로 수행하였다. PCR의 증폭 횟수는 40 회이며, 각 증폭 단계는 94 ℃에서 변성 과정 2분(첫회에는 4 분), 50 ℃에서 어닐링 과정 0.5 분, 72℃에서 연장 과정 1.5 분(마지막회에는 7분)의 순으로 수행하였다.PCR was carried out in Reference Example 1 100 ng of genomic DNA DNA, primers F7 and B9 at 0.8 mM, Taq DNA polymerase 2 units (Promega) and reaction buffer (10 mM Tris / pH 9.0, 50 mM KCl, 2.5 mM MgCl 2 , 100 μl of a mixture of 0.2 mM dNTP and 0.1% Triton X-100). The number of PCR amplifications was 40, and each amplification step was performed at 94 ° C. for 2 minutes of denaturation (4 minutes at first), 50 ° C. for annealing 0.5 minutes, and 72 ° C. for 1.5 minutes (last 7 minutes). In order.
얻어진 PCR 산물을 1.0 % 아가로스 젤에 전기영동하였으며, 그 결과를 도 2에 나타내었다. 도 2에서 제M열은 분자량 표지이고, 제2열은 PCR 산물이며, 제1열, 제3열 및 제4열은 비교를 위해 각각 개똥쑥 게놈 DNA, 프라이머 B9(서열번호: 6) 및 프라이머 F7(서열번호: 5)을 사용하지 않고 동일한 방법으로 수행한 PCR 결과이다.The obtained PCR product was electrophoresed on 1.0% agarose gel, and the results are shown in FIG. 2. In Figure 2, column M is the molecular weight label, column 2 is the PCR product, and column 1, column 3 and column 4 are the genomes of the genome, genome B9 (SEQ ID NO: 6) and primer, respectively, for comparison. PCR resulted in the same manner without using F7 (SEQ ID NO: 5).
이 PCR 산물은 184 bp 크기인 아모파-4,11-디엔 합성효소의 부분 유전자이다. 이 PCR 산물을 pGEM-T Easy vector(Promega)에 클로닝하였으며 얻어진 벡터를 벡터 p76으로 명명하였다.This PCR product is a partial gene of amopa-4,11-diene synthase that is 184 bp in size. This PCR product was cloned into pGEM-T Easy vector (Promega) and the vector obtained was named vector p76.
이어서 PCR 산물의 염기서열을 염기서열 결정 키트(ABI PRISM Dye Terminator Cycle Sequencing Kit, Applied Biosystems, Perkin-Elmer)와 DNA 서열결정기(DNA Sequencing system, ABI model 373A, Applied Biosystems, Perkin-Elmer)을 사용하여 결정하였다.Subsequently, the nucleotide sequence of the PCR product was determined using an ABI PRISM Dye Terminator Cycle Sequencing Kit, Applied Biosystems, Perkin-Elmer, and DNA Sequencing System, ABI model 373A, Applied Biosystems, Perkin-Elmer. Decided.
그 결과, 이 PCR 산물의 염기서열 및 이로부터 유추된 아미노산 서열은 공지된 담배(N. tabacum)의 5-에피-아리스톨로켄 합성효소의 염기서열 및 아미노산 서열과 비교할 때 각각 56.4 % 및 52.3 %의 상동성을 나타내었다.As a result, the nucleotide sequence of the PCR product and the amino acid sequence deduced therefrom were 56.4% and 52.3%, respectively, when compared with the nucleotide sequence and amino acid sequence of the 5-epi-aristoloken synthase of known tobacco ( N. tabacum ). The homology of
(단계 2) 노던 블랏(Step 2) Northern Blot
단계 1에서 얻은 부분 유전자의 발현 여부를 확인하기 위해, 문헌(Sambrook, J. et al., Molecular cloning: A laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press. (1989))의 방법에 따라 노던 블랏을 다음과 같이 수행하였다. 참조예 2에서 얻은 mRNA 5 ㎍을 포름알데히드가 포함된 1.2 %의 아가로스 겔에 전기영동시킨 후 나일론 막에 전이시키고, 2 x SSC(300 mM NaCl, 30 mM Na-citrate/pH 7.0)로 세척하고, 자외선을 15 초 동안 조사한 다음 DIG Easy Hyb 용액(Boehringer-Mannheim)으로 50 ℃에서 1 시간 동안 전처리시키고, 단계 1에서 얻은 벡터 p76에 대해 무작위 프라이머와 [α-32P]dATP를 사용한 무작위 프라이머 연장 반응(random primer extension)에 의해 합성한 프로브가 포함된 DIG Easy Hyb 용액(Boehringer-Mannheim)으로 50 ℃에서 하룻밤 동안 하이브리드화시킨 다음, 0.1% SDS가 포함된 2 x SSC로 50℃에서 15 분 동안 4 회 세척한 후 건조시키고 2 일 동안 X-선 필름에 노출시켰다.To confirm the expression of the partial gene obtained in step 1, Northern blot according to the method of Sambrook, J. et al., Molecular cloning: A laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press. (1989). Was carried out as follows. 5 μg of the mRNA obtained in Reference Example 2 was electrophoresed on a 1.2% agarose gel containing formaldehyde and then transferred to a nylon membrane, and washed with 2 × SSC (300 mM NaCl, 30 mM Na-citrate / pH 7.0). Irradiated with UV light for 15 seconds and then pretreated with DIG Easy Hyb solution (Boehringer-Mannheim) at 50 ° C. for 1 hour, and random primers with [α- 32 P] dATP on vector p76 obtained in step 1 Hybridization overnight at 50 ° C. with DIG Easy Hyb solution (Boehringer-Mannheim) containing probes synthesized by a random primer extension, then 15 minutes at 50 ° C. with 2 × SSC with 0.1% SDS Washed 4 times, then dried and exposed to X-ray film for 2 days.
도 3은 노던 블랏 결과를 나타낸다. 도 3에서 제M열은 분자량 표지이고, 제1열은 mRNA이다. 도 3에서 보듯이, 2.2 kb 크기의 mRNA 밴드가 확인되었다. 따라서 단계 1에서 얻은 부분 유전자는 발현됨을 알 수 있다.3 shows Northern blot results. In Figure 3, column M is the molecular weight label, column 1 is mRNA. As shown in Figure 3, a 2.2 kb mRNA band was confirmed. Therefore, it can be seen that the partial gene obtained in step 1 is expressed.
(단계 3) 서던 블랏(Step 3) Southern Blot
단계 1에서 얻은 부분 유전자의 게놈 구조를 확인하기 위해, 문헌(Sambrook, J. et al., Molecular cloning: A laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press. (1989))의 방법에 따라, 참조예 1에서 얻은 게놈 DNA를BamHI,EcoRI 또는HindIII로 절단한 후 단계 1에서 얻은 벡터 p76을 프로브로 사용하여 서던 블랏을 수행하였다.To confirm the genomic structure of the partial gene obtained in step 1, see the method of Sambrook, J. et al., Molecular cloning: A laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press. (1989). The genomic DNA obtained in Example 1 was digested with Bam HI, Eco RI or Hind III and Southern blot was performed using the vector p76 obtained in step 1 as a probe.
도 4는 서던 블랏 결과를 나타낸다. 도 4에서 제M열은 분자량 표지이고, 제B열은BamHI로 절단된 게놈 DNA이며, 제E열은EcoRI으로 절단된 게놈 DNA이며, 제H열은HindIII로 절단된 게놈 DNA이다. 도 4에서 보듯이, 부분 유전자는 게놈 DNA의BamHI,EcoRI 및HindIII 절편에 대해 각각 13 kb, 9kb 및 8kb의 단일 밴드를 나타내었다. 이로부터 단계 1에서 얻은 부분 유전자는 게놈내에 단일 카피로 존재함을 알 수 있다.4 shows Southern blot results. In Figure 4, column M is a molecular weight label, column B is genomic DNA cleaved with Bam HI, column E is genomic DNA cleaved with Eco RI, and column H is genomic DNA cleaved with Hind III. As shown in FIG. 4, partial genes showed single bands of 13 kb, 9 kb and 8 kb for Bam HI, Eco RI and Hind III fragments of genomic DNA, respectively. From this it can be seen that the partial gene obtained in step 1 exists in a single copy in the genome.
실시예 2: 개똥쑥 아모파-4,11-디엔 합성효소의 전장 cDNA의 클로닝Example 2 Cloning of Full-length cDNA of Firefly Amopa-4,11-diene Synthetase
개똥쑥 아모파-4,11-디엔 합성효소의 전장 cDNA를 클로닝하기 위해, 문헌(McPherson, M.J. et al.,PCR2: A practical approach, p89-118, IRL Press (1995))의 cDNA 말단의 빠른 증폭(Rapid amplification of cDNA ends, RACE) 방법에 따라 다음과 같이 수행하였다.To clone the full-length cDNA of the firefly Amopa-4,11-diene synthase, the rapid cDNA terminus of McPherson, MJ et al., PCR2: A practical approach , p89-118, IRL Press (1995) According to the amplification (Rapid amplification of cDNA ends, RACE) method was performed as follows.
먼저 3'-RACE에 사용될 이중가닥 cDNA를 얻기 위해, Universal RiboClone cDNA synthesis system(Promega)과, UAP(서열번호: 7)와 poly-(dT)17를 포함하는 AP프라이머(서열번호: 8)를 사용하여 참조예 2에서 얻은 mRNA를 역전사하여 이중가닥 cDNA 주형을 얻었다. 얻어진 이중가닥 cDNA를 주형으로 하고 내부 프라이머(nested primer) IPF(서열번호: 9) 및 UAP(서열번호: 7)를 사용하여 PCR를 수행하였다. 이때 PCR의 증폭 횟수는 35회이며, 각 증폭 단계는 94 ℃에서 변성 과정 1분, 50 ℃에서 어닐링 과정 1분, 및 72 ℃에서 연장 과정 2 분의 순서로 수행하였다.First, to obtain a double-stranded cDNA to be used for 3'-RACE, an AP primer (SEQ ID NO: 8) containing a Universal RiboClone cDNA synthesis system (Promega), UAP (SEQ ID NO: 7) and poly- (dT) 17 The mRNA obtained in Reference Example 2 was reverse transcribed to obtain a double stranded cDNA template. The obtained double-stranded cDNA was used as a template and PCR was performed using a nested primer IPF (SEQ ID NO: 9) and a UAP (SEQ ID NO: 7). At this time, the PCR amplification number was 35 times, and each amplification step was performed in the order of denaturation process 1 minute at 94 ° C, annealing process 1 minute at 50 ° C, and extension process 2 minutes at 72 ° C.
또한 5'-RACE에 사용될 단일가닥 cDNA를 얻기 위해, 동일한 RiboClone cDNA synthesis system과 poly-(dT)15프라이머를 사용하여 참조예 2에서 얻은 mRNA를 역전사하여 단일가닥 cDNA를 얻은 후, 이 단일 가닥 cDNA를 5'-NV 프라이머(서열번호: 10)를 연결하여 5'-RACE에 사용될 cDNA 주형을 얻었다. 이때 5'-NV 프라이머의 3' 말단은 아미노화(amination)시켜 차단(blocking)하고, 5' 말단은 인산화시켜 사용하였다. 5'-RACE는 얻어진 cDNA를 주형으로 하고 내부 프라이머 IPB(서열번호: 11) 및 5'-3(서열번호: 12)를 사용하여 3'-RACE에서와 동일한 방법으로 PCR을 수행하였다.In addition, in order to obtain a single stranded cDNA to be used for 5'-RACE, using the same RiboClone cDNA synthesis system and poly- (dT) 15 primer, the mRNA obtained in Reference Example 2 was reverse transcribed to obtain a single stranded cDNA, followed by the single stranded cDNA. The 5'-NV primer (SEQ ID NO: 10) was linked to obtain a cDNA template to be used for 5'-RACE. At this time, the 3 'end of the 5'-NV primer was blocked by amination (amination), and the 5' end was used by phosphorylation. 5'-RACE was a template of the obtained cDNA and PCR was performed in the same manner as in 3'-RACE using the internal primers IPB (SEQ ID NO: 11) and 5'-3 (SEQ ID NO: 12).
얻어진 3'-RACE 산물과 5'-RACE 산물을 1.0 % 아가로스 겔에 전기영동하였으며, 그 결과는 각각 도 5a 및 5b에 나타내었다. 도 5a와 5b에서 제1열은 분자량 표지이고 제2열은 각각 3'-RACE 및 5'-RACE 산물이다. 또한 3'-RACE 및 5'-RACE 산물의 염기서열을 결정하였다.The obtained 3'-RACE product and 5'-RACE product were electrophoresed on 1.0% agarose gel, and the results are shown in FIGS. 5A and 5B, respectively. In Figures 5a and 5b the first row is the molecular weight label and the second row is the 3'-RACE and 5'-RACE products, respectively. In addition, the base sequences of the 3'-RACE and 5'-RACE products were determined.
그 결과 3'-RACE 산물은 1,291 bp 크기이고 5'-RACE 산물은 878 bp 크기이며, 이들 산물의 염기서열은 31 뉴클레오티드만큼 중복되고, 실시예 1의 단계 1에서 얻은 부분 유전자(p76)의 염기서열을 모두 포함하였다. 3'-RACE 산물과 5'-RACE 산물의 염기서열 정보를 종합하여 2,106 bp 크기의 전장 cDNA 염기서열을 얻을 수 있었으며, 그 결과는 서열번호: 1과 같다. 서열번호: 1에서 보듯이, 식물에서 번역 개시를 위한 보존된 염기서열 GAAAATCATGT가 27부터 37까지의 영역에 있고, 1641 bp 크기의 오픈 리딩 프레임이 있으며 이 프레임상에 종료 코돈이 있고, 33 bp 크기의 5'-비번역 말단과 432 bp 크기의 3'-비번역 말단이 있다. 또한 전형적인 폴리아데닌 신호 AATAAT/A가 1778부터 1786까지의 영역에 2회 나타난다. 17 뉴클레오티드 크기의 프라이머 F7는 게놈의 해당 영역과 3 개 염기만이 상이하였고, 22 뉴클레오티드 크기의 프라이머 B9는 게놈의 해당 영역과 4 개의 염기만이 상이하였다. 상기 오픈 리딩 프레임으로부터 유추된 단백질의 아미노산 서열은 서열번호: 2와 같으며, 서열번호: 2에서 보듯이 546 개의 아미노산 잔기로 구성되고 pI 값은 5.59이고 Mw 값은 63.9 kDa이다. 특히 단백질에는 플라스티드 표적 서열(plastid targeting sequence)이 포함되지 않았는데, 이것은 이 유전자로부터 코딩되는 효소가 원형질 부위에 광범위하게 분포한다는 것을 암시한다(Bohlmann, J. et al.,Proc. Natl. Acad. Sci. USA. 95, 4126-4133 (1998); 및 McGarvey, D.J. et al.,Plant Cell 7, 1015-1026 (1995)).As a result, the 3'-RACE product is 1,291 bp in size and the 5'-RACE product is 878 bp in size, and the nucleotide sequences of these products overlap by 31 nucleotides, and the base of the partial gene (p76) obtained in step 1 of Example 1 is obtained. All sequences were included. The base sequence information of the 3'-RACE product and the 5'-RACE product was synthesized to obtain a 2,106 bp full-length cDNA sequence. The result is shown in SEQ ID NO: 1. As shown in SEQ ID NO: 1, the conserved nucleotide sequence GAAAATCATGT for translation initiation in plants is in the region from 27 to 37, has an open reading frame of 1641 bp, an end codon on this frame, and a 33 bp size. Has a 5'-untranslated terminus and a 3'-untranslated terminus of 432 bp. Also, the typical polyadenine signal AATAAT / A appears twice in the region from 1778 to 1786. Primer F7, 17 nucleotides in size, differed only by 3 bases from that region of the genome, and 22 nucleotides primer B9 differed only by 4 bases from the corresponding region of the genome. The amino acid sequence of the protein inferred from the open reading frame is as shown in SEQ ID NO: 2, and consists of 546 amino acid residues as shown in SEQ ID NO: 2, a pI value of 5.59 and a Mw value of 63.9 kDa. In particular, proteins do not contain plastid targeting sequences, suggesting that the enzymes encoded from these genes are widely distributed at the plasma sites (Bohlmann, J. et al., Proc. Natl. Acad. Sci USA 95, 4126-4133 (1998) ;... and McGarvey, DJ et al, Plant Cell 7, 1015-1026 (1995)).
이 염기서열 및 아미노산 서열은 GenBank/EMBL 데이터베이스에 등록번호 제AJ251751호로 등록하였다.This base sequence and amino acid sequence were registered under Gen. AJ251751 in the GenBank / EMBL database.
유추된 단백질의 아미노산 서열을 다른 세스퀴테르펜 합성효소들의 경우와비교한 결과, 도 6에 도시된 바와 같이 매우 높은 일치도를 보였으며, 특히 담배 5-에피-아리스톨로켄 합성효소의 경우와 36 %, 목화 (+)-δ-카디넨 합성효소와 41%의 일치도를 보였다.Comparing the amino acid sequence of the inferred protein with that of other sesquiterpene synthetases, it showed a very high agreement as shown in FIG. 6, in particular 36% with that of the tobacco 5-epi-aristoloken synthase. , 41% concordance with cotton (+)-δ-cardinene synthase.
또한 유추된 단백질의 아미노산 서열을 개똥쑥에서 분리된 두 개의 다른 테르펜 합성효소인 에피-세드롤 사이클레이즈 및 (3R)-리날룰 합성 효소의 경우와 비교한 결과, 도 6에 도시된 바와 같이 에피-세드롤 사이클레이즈와 51 %의 일치도를 보였으며, 모노테르펜 합성효소의 하나인 (3R)-리날룰 합성 효소와는 27 %의 낮은 일치도를 보였다.In addition, the amino acid sequence of the inferred protein was compared with the case of two different terpene synthase epi-cedrol cyclase and (3R) -linalul synthase isolated from firefly, as shown in FIG. It showed a 51% agreement with cedrol cyclase and a low 27% agreement with (3R) -linalul synthase, one of the monoterpene synthetases.
실시예 3: 개똥쑥 아모파-4,11-디엔 합성효소 유전자의 클로닝 및 발현Example 3: Cloning and Expression of Firefly Amopa-4,11-diene Synthase Gene
(단계 1) 유전자의 클로닝(Step 1) Cloning of Genes
오픈 리딩 프레임 전부를 포함하는 아모파-4,11-디엔 합성효소 cDNA 유전자를 얻기 위해, 실시예 2에서 얻은 염기서열을 토대로, 개시 코돈과 종료 코돈 주변 서열에 대한 한 쌍의 프라이머 START(서열번호: 3)와 STOP(서열번호: 4)를 제작하였다. 프라이머 START와 STOP는 각각 제한효소 BamH I과 EcoR I의 절단 부위를 포함하도록 고안하였다. 참조예 2에서 얻은 mRNA를 주형으로 하고 상기 프라이머 START와 STOP를 사용하여 PCR를 수행하였다.To obtain the Amopa-4,11-diene synthase cDNA gene containing all of the open reading frames, based on the nucleotide sequence obtained in Example 2, a pair of primers START (SEQ ID NO: : 3) and STOP (SEQ ID NO: 4) were produced. Primers START and STOP were designed to include cleavage sites of restriction enzymes BamH I and EcoR I, respectively. The mRNA obtained in Reference Example 2 was used as a template, and PCR was performed using the primers START and STOP.
얻어진 PCR 산물은 전기영동하였으며, 그 결과를 도 7에 나타내었다. 도 7에서 제1열은 분자량 표지이고 제2열은 PCR 산물이다. 얻어진 PCR 산물은 1,641 bp의 크기이고 전장 cDNA를 포함한다.The obtained PCR product was electrophoresed, and the results are shown in FIG. In Figure 7, column 1 is the molecular weight label and column 2 is the PCR product. The resulting PCR product is 1641 bp in size and contains full length cDNA.
이 PCR 산물을 발현벡터 pET-5a(Promega)의 BamH I과 EcoR I 위치에 클로닝하였으며 얻어진 발현벡터를 pkcs12로 명명하였다. 발현벡터 pkcs12를 대장균 BL21(DE3)pLysS 세포(Promega)에 형질전환시켰다. 얻어진 형질전환 대장균 BL31(DE3)/pLysS를 생명공학연구소 부설 유전자 은행에 2000년 2월 18일자 기탁번호 제 KCTC 0739BP 호로 기탁하였다.This PCR product was cloned into BamH I and EcoR I positions of the expression vector pET-5a (Promega) and the resulting expression vector was named pkcs12. The expression vector pkcs12 was transformed into E. coli BL21 (DE3) pLysS cells (Promega). The obtained transformed Escherichia coli BL31 (DE3) / pLysS was deposited in the gene bank affiliated with the Biotechnology Research Institute with accession number KCTC 0739BP dated February 18, 2000.
(단계 2) 전장 유전자의 발현 및 분석(Step 2) Expression and Analysis of Full Length Genes
단계 1에서 얻어진 형질전환 대장균kcs12를 100 ㎍/㎖ 암피실린이 포함된 LB 배지에서 하룻밤 동안 배양하였다. 배양액 0.5 ㎖를 취하여 50 ㎖의 신선한 동일 배지에 접종한 후 37 ℃에서 격렬히 교반시키면서 600 ㎚의 파장에서 흡광도(A600)가 0.5에 도달할 때까지 배양한 다음 1 mM IPTG를 첨가하고 37 ℃에서 3 시간 동안 배양하였다.The transformed E. coli kcs 12 obtained in step 1 was incubated overnight in LB medium containing 100 μg / ml ampicillin. 0.5 ml of the culture was inoculated into 50 ml of the same fresh medium and incubated at 37 ° C. with vigorous stirring until absorbance (A 600 ) reached 0.5, followed by addition of 1 mM IPTG and at 37 ° C. Incubated for 3 hours.
배양액을 4℃, 1,000 xg에서 15 분 동안 원심분리하여 세포를 침전시킨 후 여기에 0.5 ㎖의 용해 완충액(lysis buffer; 50 mM Tris/pH 8.0, 1 mM EDTA, 100 mM NaCl, 및 1 mM DTT)을 가하여 용해시킨 다음 초음파를 이용하여 세포를 파쇄하였다. 단백질의 농도는 브래포드 방법(Bradford, M.Anal. Biochem. 72, 248-254 (1976))에 따라 소 혈장 알부민을 표준물로 사용하여 측정하였다.The cultures were centrifuged at 1,000 x g for 15 minutes at 4 ° C to precipitate the cells, followed by 0.5 ml of lysis buffer (50 mM Tris / pH 8.0, 1 mM EDTA, 100 mM NaCl, and 1 mM DTT). ) Was added and lysed, and the cells were disrupted using ultrasound. Protein concentrations were determined using bovine plasma albumin as a standard according to the Bradford method (Bradford, M. Anal. Biochem. 72 , 248-254 (1976)).
얻어진 세포 파쇄물을 반응용액(200 mM Tris/pH 7.5, 40 mM MgCl2, 0.2 μM [1-3H]FDP (108 mCi/mmol. NEN, Boston, MA) 및 36 μM FDP(Sigma))와 함께 35 ℃에서 1 시간 동안 반응시켰다. 얻어진 반응 생성물을 헥산으로 추출한 후 헥산층을 파스퇴르 피펫으로 만든 작은 실리카겔 컬럼을 통과시켜 FDP 또는 포스파테이즈 활성에 의해 생성되는 파니솔(farnesol)을 제거하였다. 헥산층에 존재하는 방사능을 섬광계측기(scintillation counter)를 이용하여 측정하여 효소활성을 결정하였다. 효소 활성은 nmol 생성물/h/㎎ 단백질로 나타내었다. SDS-PAGE는 램리의 방법(Laemmli, U.K.Nature227, 680-685 (1970))을 따라 10% 겔 상에서 수행하였고 코마시 브릴리언트 블루로 염색하였다. 이때 대조구로는 형질전환되지 않은 대장균을 사용하여 동일하게 배양 및 효소 활성을 측정하였다.The resulting cell lysate was combined with the reaction solution (200 mM Tris / pH 7.5, 40 mM MgCl 2 , 0.2 μM [1- 3 H] FDP (108 mCi / mmol. NEN, Boston, Mass.) And 36 μM FDP (Sigma)). The reaction was carried out at 35 ° C. for 1 hour. The obtained reaction product was extracted with hexane and the hexane layer was passed through a small silica gel column made of Pasteur pipette to remove farnesol produced by FDP or phosphatase activity. Radioactivity present in the hexane layer was measured using a scintillation counter to determine enzymatic activity. Enzyme activity is expressed as nmol product / h / mg protein. SDS-PAGE was performed on a 10% gel following Lamley's method (Laemmli, UK Nature 227, 680-685 (1970)) and stained with Coomassie Brilliant Blue. At this time, as a control, the culture and enzyme activity were measured in the same manner using E. coli untransformed.
그 결과 형질전환 대장균의 불용성 분획에서 61 kDa의 단백질 밴드가 확인되었다. 또한 형질전환 대장균에서 발현된kcs12 단백질이 FDP와 반응하여 아모파-4,11-디엔을 생성하는 데 반해 대조구에서는 아모파-4,11-디엔이 검출되지 않았다. 이러한 결과로부터 단계 1에서 얻은 유전자가 아모파-4,11-디엔 합성효소의 유전자임을 확인하였다.As a result, a 61 kDa protein band was identified in the insoluble fraction of transformed E. coli. In addition, the expressed protein from the transformed E. coli kcs 12 whereas which reacts with the amorphous FDP generated wave -4,11- diene in the control was not amorphous wave -4,11- diene detected. From these results, it was confirmed that the gene obtained in step 1 is a gene of amopa-4,11-diene synthase.
(단계 3) 유전자 발현물의 분석(Step 3) Analysis of Gene Expressions
단계 2에서 발현된 효소에 의한 반응 생성물의 화학적 정체를 규명하기 위해서, 배지 50 ㎖에서 대규모 배양한 후 효소를 조추출하고, 이 효소 조추출물을 36 M FDP와 37℃에서 하룻밤 동안 반응시킨 후 단계 3에서 동일한 방법으로 헥산 추출 및 실리카겔 칼럼을 통과시켰다. 얻어진 용출액을 농축한 후 가스 크로마토그래피-질량 분광법(GM-MS) 분석을 다음과 같이 수행하였다.In order to identify the chemical identity of the reaction product by the enzyme expressed in step 2, after the large-scale cultivation in 50 ml of the medium, the crude extract was extracted, and the crude crude extract was reacted with 36 M FDP at 37 ° C. overnight. Hexane extraction and silica gel columns were passed through the same method in 3. The obtained eluate was concentrated and then gas chromatography-mass spectroscopy (GM-MS) analysis was performed as follows.
전자 충격(electron impact) 모드에서 구동하는 AX505WA 질량 스펙트로미터(JEOL, Japan)가 장착된 HP5890 series II system (Hewlett Packard, Germany)HP5890 series II system (Hewlett Packard, Germany) with AX505WA mass spectrometer (JEOL, Japan) running in electron impact mode
인젝터 온도: 250℃Injector Temperature: 250 ℃
유속: 2 ㎖/분Flow rate: 2 ml / min
스플릿 비(split ratio): 5:1Split ratio: 5: 1
오븐 온도: 2분 동안 100 ℃, 이후 5 ℃/분의 속도로 150 ℃까지 승온, 이후 10 ℃/분의 속도로 250 ℃까지 승온, 이어서 250 ℃에서 2 분.Oven temperature: 100 ° C. for 2 minutes, then elevated to 150 ° C. at a rate of 5 ° C./min, then elevated to 250 ° C. at a rate of 10 ° C./min, followed by 2 minutes at 250 ° C.
운반 기체: N2 Carrier gas: N 2
칼럼: DB-5 column (30m×0.25㎛×0.25㎜)Column: DB-5 column (30m × 0.25㎛ × 0.25mm)
이때 표준물로는 참조예 3에서 합성한 아모파-4,11-디엔을 사용하였으며, 반응 생성물은 표준물의 경과시간, 질량 스펙트럼과 비교하여 동정하였다.At this time, Amopa-4,11-diene synthesized in Reference Example 3 was used as a standard, and the reaction product was identified by comparing with an elapsed time and a mass spectrum of the standard.
도 8a는 효소 반응물의 가스 크로마토그래피 스펙트럼이고, 도 8b는 머무름 시간(retension time) 9.3 분에 얻은 효소 반응물의 질량 스펙트럼이며, 8c는 참조예 3에서 얻은 표준 아모파-4,11-디엔(머무름 시간: 9.3 분)의 질량 스펙트럼이다. 도 8a 내지 8c에서 보듯이, 효소 반응물은 9.3 분의 머무름 시간(retention time)과 m/z 204의 질량 단위(mass unit)를 나타냈는데, 이는 참조예 3에서 합성한 아테미시닌의 결과와도 일치한다. m/z 204에서 선택적 이온 검출(selective ion monitoring)에 의하면 머무름 시간을 나타내는 단일 피크를 보여주었다. 이로부터 발현된 효소는 아모파-4,11-디엔의 합성 효소임을 알 수 있다. 단계 2에서와 동일하게3H-FDP와 반응시킨 결과 효소의 활성은 0.212 nmol/h/mg 단백질로 나타났다.8A is a gas chromatography spectrum of an enzyme reactant, FIG. 8B is a mass spectrum of an enzyme reactant obtained at 9.3 minutes of retention time, and 8c is a standard amopa-4,11-diene obtained from Reference Example 3. Time: 9.3 min). As shown in FIGS. 8A to 8C, the enzyme reactant showed a retention time of 9.3 minutes and a mass unit of m / z 204, which is also the result of atemisinin synthesized in Reference Example 3. Matches. Selective ion monitoring at m / z 204 showed a single peak representing retention time. It can be seen that the enzyme expressed therefrom is a synthetic enzyme of amopa-4,11-diene. As in step 2, the enzyme activity was 0.212 nmol / h / mg protein as a result of reaction with 3 H-FDP.
본 발명의 효소는 항말라리아제로 유용한 아테미시닌의 생합성 경로 중 아모파-4,11-디엔의 합성 반응을 매개하는 아모파-4,11-디엔 합성 효소로서, 이 효소의 유전자로 형질전환된 식물체는 대사공학(metabolic engineering)을 이용한 아테미시닌의 생합성 효율의 증대를 통해 아테미시닌의 대량생산에 유용하게 사용될 수 있다.The enzyme of the present invention is an amopa-4,11-diene synthetase which mediates the synthesis reaction of amopa-4,11-diene in the biosynthetic pathway of atemisinin, which is useful as an antimalarial agent. Plants can be useful for mass production of atemisinin by increasing the biosynthetic efficiency of atemisinin using metabolic engineering.
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