KR100967588B1 - Protein marker related with the muscle development stage for improving economic traits of Hanwoo - Google Patents

Protein marker related with the muscle development stage for improving economic traits of Hanwoo Download PDF

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KR100967588B1
KR100967588B1 KR1020080013643A KR20080013643A KR100967588B1 KR 100967588 B1 KR100967588 B1 KR 100967588B1 KR 1020080013643 A KR1020080013643 A KR 1020080013643A KR 20080013643 A KR20080013643 A KR 20080013643A KR 100967588 B1 KR100967588 B1 KR 100967588B1
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최윤재
이홍구
한정아
김상훈
서강석
윤두학
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재단법인서울대학교산학협력재단
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Abstract

본 발명은 고급육 생산을 위한 근육발달시기 및 지방발달시기와 관련된 바이오 마커 단백질 및 이를 이용하여 우수한 경제형질을 지닌 한우를 선발하는 방법에 관한 것이다.The present invention relates to a biomarker protein related to muscle development time and fat development time for high-quality meat production, and a method for selecting Hanwoo having excellent economic traits using the same.

본 발명에 따르면, 단백질 수준에서 한우의 근육발달시기 및 지방발달시기와 관련된 바이오 마커 단백질을 프로테옴분석 기술을 이용하여 선발한 후 이를 활용하여 새로운 개념의 고급육 생산기술을 정착시킬 수 있다. 또한, 고비용의 표현형 위주의 능력검정작업을 최소화함과 동시에 성장 초기에 고급육 선별에 활용하여 형질이 우수한 한우를 확보할 수 있다.According to the present invention, the biomarker protein related to the muscle development time and the fat development time of Hanwoo at the protein level can be selected using proteome analysis technology and then used to establish a new concept of advanced meat production technology. In addition, while minimizing the costly phenotypic capacity-testing operation at the same time, it can be used for the selection of high-quality meat in the early stage of growth can ensure a good Hanwoo.

한우, 근육발달시기, 지방발달시기, 바이오 마커, 프로테옴, villin 2 Korean beef, muscle development, fat development, biomarkers, proteome, villin 2

Description

한우 경제형질 개선을 위한 근육발달시기 관련 바이오 마커 단백질 {Protein marker related with the muscle development stage for improving economic traits of Hanwoo}Protein marker related with the muscle development stage for improving economic traits of Hanwoo}

본 발명은 축산물 등급판정에서 고급육 선별의 중요한 요소 중 하나인 근육발달시기 관련 바이오 마커 단백질에 관한 것으로, 더욱 구체적으로 지방발달시기의 등심조직보다 근육발달시기의 등심조직에서 발현이 상대적으로 증가되는 단백질과 이를 이용한 성장초기 형질을 예측할 수 있는 진단키트에 관한 것이다.The present invention relates to a biomarker protein related to muscle development time, which is one of the important elements of high-quality meat selection in livestock grading, and more specifically, a protein whose expression is increased in the loin tissue during muscle development rather than the loin tissue during fat development. And it relates to a diagnostic kit that can predict the early growth trait using the same.

일반적으로 거세한우의 기관별 조직 발육시기를 보면 근육의 경우 2.7개월부터 시작되어 최대발육월령은 11개월령이고, 지방의 경우 12.4개월령부터 시작되어 가장 발육이 왕성한 시기는 17개월령으로 알려지고 있으며 근육의 월간 증가량은 3.84kg이며 지방 3.85kg이다. 특히 근육 내 지방함량은 17개월령 전후에 급격한 증가를 보이는 것으로 알려져 있다. 따라서 시기별로 특이적으로 발현되는 단백질의 발굴은 근육 및 근육 내 지방발달과 밀접한 관계가 있음을 시사한다.In general, the tissue development time of each castrated cattle starts from 2.7 months in muscle, the maximum age is 11 months, and in fat, it starts from 12.4 months and the most active period is known as 17 months. The increase is 3.84 kg and 3.85 kg fat. In particular, muscle fat content is known to increase rapidly around 17 months of age. Therefore, the discovery of protein that is specifically expressed at each time suggests that it is closely related to muscle and muscle fat development.

최근 고급육 생산을 위하여 도체형질에 대한 조사가 활발히 진행되면서 생체에서의 근육 내 지방함량에 대한 관심이 고조되고 있다. 도체형질에는 도체중, 등지방두께, 배최장근 단면적, 도체율 및 근육 내 지방함량이 포함된다. 따라서 근육내 지방함량은 축산물 등급판정에서 육량등급 판정의 객관적 지표로서 사용될 수 있다.Recently, as the investigation of carcass traits for the production of high-quality meat has been actively conducted, interest in the intramuscular fat content in the living body is increasing. Carcass traits include carcass weight, backfat thickness, dorsal muscle cross-sectional area, carcass rate and intramuscular fat content. Therefore, intramuscular fat content can be used as an objective indicator of meat grading in livestock grading.

따라서, 본 발명의 주된 목적은 한우 고급육 생산을 위한 새로운 바이오 마커 단백질을 제공하는 데 있다.Therefore, the main object of the present invention is to provide a new biomarker protein for the production of high-quality beef cattle.

본 발명의 다른 목적은 상기 바이오 마커 단백질에 대한 항체 및 이를 이용한 진단키트를 제공하는데 있다.Another object of the present invention to provide an antibody and a diagnostic kit using the biomarker protein.

본 발명의 한 양태에 따르면, 본 발명은 지방발달시기의 등심조직보다 근육발달시기의 등심조직에서 발현이 상대적으로 증가되는, 서열번호 1을 갖는 빌린 2(villin 2) 단백질을 포함하는 한우 고급육 선별용 바이오마커를 제공한다.According to one aspect of the present invention, the present invention provides a selection of high-quality Korean beef, including villin 2 protein having SEQ ID NO: 1, wherein expression is increased in the lumber tissue at the time of muscle development rather than the rump tissue at the time of fat development. It provides a biomarker for.

본 발명에서, “근육발달시기”란 한우의 근육 조직이 발달하는 생후 2.7개월부터 최대발육월령인 11개월 사이를 말하는 것으로 개체의 성장, 즉 도체중, 근육량 등이 빠르게 증가하는 시기이다. 또한 “지방발달시기”란 근육내 지방이 발달하는 시기를 말하는 것으로, 근육 내 지방함량은 17개월을 전후하여 급격한 증가를 보이는 것으로 알려져 있다. 따라서 시기별로 특이적으로 발현되는 단백질의 발굴은 근육조직의 발달 및 근육조직 내 지방발달과 밀접한 관계가 있음을 시사한다.In the present invention, "muscle development time" refers to a period between 2.7 months of age when the muscle tissue of a cow develops and 11 months of maximum developmental age, and is a time when the growth of an individual, ie, carcass weight, muscle mass, etc. increases rapidly. In addition, the "fat development time" refers to the development of muscle fat, the muscle fat content is known to increase rapidly around 17 months. Therefore, the discovery of protein that is specifically expressed at each time suggests that it is closely related to the development of muscle tissue and fat development in muscle tissue.

본 발명에서, 상기 바이오마커를 이용하여 근육내 지방함량이 높은 형질을 가진 한우를 선별할 수 있으며, 구체적으로 상기 근육발달시기에서 발현이 상대적으로 증가하는 단백질로 구성된 바이오 마커를 이용하여 검출 안되면 근육 내 지방 함량이 높은 형질의 한우이며, 검출되면 근육 내 지방함량이 낮은 형질의 한우로 판단할 수 있다. 즉 한우가 성장할 때, 근육조직이 발달되다가 근육조직내 지방이 증가하기 시작하는 시기에 특이적으로 증가 또는 감소되는 단백질은 근육내 지방합성에 관여하고 근육 내 지방량과도 관계가 있다는 간접적인 증거이다. 따라서 이렇게 발굴된 단백질은 근육내 지방축적이 많은 후보동물임을 알아낼 수 있는 바이오 마커인 동시에 근육내 지방함량이 높은 고급육의 선발에 이용되는 바이오마커로서 사용될 수 있다.In the present invention, the biomarker can be used to select a Hanwoo cattle having a high intramuscular fat trait, specifically, if not detected by using a biomarker consisting of a protein that is relatively increased expression in the muscle development time The trait is a Korean cattle with high fat content, and if detected, it can be judged as a Korean cattle with low muscle fat content. That is, indirect evidence that proteins that increase or decrease specifically when muscle tissue develops when Hanwoo is growing and fat in muscle tissue starts to increase are involved in intramuscular fat synthesis and are also related to intramuscular fat mass. . Therefore, the discovered protein can be used as a biomarker that can be identified as a candidate animal having a lot of intramuscular fat accumulation and at the same time as a biomarker used for selection of high-quality meat having high intramuscular fat content.

본 발명의 다른 양태에 따르면, 본 발명은 상기 바이오마커 단백질 또는 그 면역원성 단편에 특이적으로 결합하는 항체를 유효성분으로 포함하는 한우 고급육 선별용 진단제를 제공한다.According to another aspect of the present invention, the present invention provides a diagnostic agent for the selection of high-quality beef cattle, including an antibody that specifically binds to the biomarker protein or immunogenic fragment thereof.

본 발명에서, 상기 면역원성 단편이란 본 발명의 바이오마커 단백질에 대한 항체에 의해 인식될 수 있는 하나 이상의 에피토프(epitope)를 가지고 있는 바이오마커 단백질 단편을 의미한다.In the present invention, the immunogenic fragment means a biomarker protein fragment having one or more epitopes that can be recognized by an antibody against the biomarker protein of the present invention.

본 발명의 한우 고급육 선별용 진단제에서, 상기 항체는 폴리클로날 항체일 수도 있으나, 모노클로날 항체인 것이 바람직하다. 폴리클로날 항체는 당업자에 알려진 종래방법에 따라 면역원인 바이오 마커 단백질 또는 그 단편을 외부 숙주에 주사함으로서 제조될 수 있다. 외부 숙주는 마우스, 래트, 양, 토끼와 같은 포유동물을 포함한다. 면역원은 근내, 복강 내 또는 피하 주사방법으로 주사되며, 일반적으로 항원성을 증가시키기 위한 보조제(adjuvant)와 함께 투여된다. 외부숙주로부터 정기적으로 혈액을 채취하여 향상된 역가 및 항원에 대한 특이성을 보이는 혈청 을 수거하거나 이로부터 항체를 분리, 정제한다.In the diagnostic agent for screening high-quality beef cattle of the present invention, the antibody may be a polyclonal antibody, but is preferably a monoclonal antibody. Polyclonal antibodies can be prepared by injecting a biomarker protein or fragment thereof that is an immunogen into an external host according to conventional methods known to those skilled in the art. External hosts include mammals such as mice, rats, sheep, rabbits. Immunogens are injected intramuscularly, intraperitoneally or subcutaneously, and are usually administered with an adjuvant to increase antigenicity. Blood is collected periodically from external hosts to collect serum that shows improved titers and specificity for antigens, or to separate and purify antibodies.

모노클로날 항체는 당업자에 알려진 융합에 의한 불멸화된 세포주 생성기술(Koeher and Milstein 1975, Nature, 265:495)에 의해 제조될 수 있다. 그 제조방법은 간단히 설명하면 다음과 같다. 먼저 순수한 단백질을 20 μg을 얻어서 Balb/C 쥐에 면역화를 시키거나 펩타이드를 합성하여 소혈청 알부민과 결합시켜 쥐에 면역화 시킨다. 그 후에 쥐에서 분리된 항원-생산 임파구를 인간 또는 마우스의 미엘로마와 융합하여 불멸화된 하이브리도마를 생성하며, 엘라이져(ELISA) 방법을 사용하여 원하는 모노클로날 항체를 생성하는 하이브리도마 세포만을 선택하여 증식한 후 배양물로부터 모노클로날 항체를 분리, 정제한다.Monoclonal antibodies can be prepared by techniques of generation of immortalized cell lines by fusions known to those skilled in the art (Koeher and Milstein 1975, Nature, 265: 495). The manufacturing method is briefly described as follows. First, 20 μg of pure protein is immunized to Balb / C mice or a peptide is synthesized and combined with bovine serum albumin to immunize mice. The antigen-producing lymphocytes isolated from mice are then fused with myeloma in humans or mice to produce immortalized hybridomas, and hybridoma cells producing the desired monoclonal antibodies using ELISA methods. Only by propagation by selection, monoclonal antibodies are isolated and purified from the culture.

본 발명의 다른 양태에 따르면, 본 발명은 한우의 등심조직에서 상기 바이오마커 단백질의 존재를 검출하는 단계를 포함하는 한우의 고급육 선별방법을 제공한다.According to another aspect of the present invention, the present invention provides a method for selecting high-quality meat of Hanwoo, comprising detecting the presence of the biomarker protein in the loin tissue of Hanwoo.

본 발명의 선별방법에서, 상기 검출 단계는 한우의 등심조직으로부터 2차원 전기영동(2-DE)으로 바이오 마커 단백질의 존재를 직접 검출하거나, 등심조직을 본 발명의 항체와 접촉시켜 항원항체반응을 통해 바이오 마커 단백질의 존재를 간접적으로 확인하는 것을 포함한다. 항원항체반응으로서 현재 널리 알려진 면역분석(immunoassay)법은 효소면역측정법(ELISA, Coated tube), 항체결합 magnetic particle을 이용한 magnetic particle법, 항체결합 latex particle을 이용한 latex particle법 등이 있다.In the screening method of the present invention, the detecting step directly detects the presence of the biomarker protein by 2-D electrophoresis (2-DE) from the loin tissue of Hanwoo, or makes the antigen antibody reaction by contacting the loin tissue with the antibody of the present invention. Indirectly through the presence of a biomarker protein. Currently known immunoassays (immunoassay) as an antigen antibody reaction include enzyme immunoassay (ELISA, Coated tube), magnetic particles using antibody-bound magnetic particles, latex particles using antibody-bound latex particles.

본 발명에서, 상기 한우의 고급육 선별방법을 이용하여 그 결과를 판단할 때 에는 근육발달시기와 지방발달시기 사이의 단백질 검출량을 적정 기준으로 하여, 고급육의 등급을 지정할 수 있다. 다시 말해, 상기 바이오마커를 특정 검출양을 기준으로 검출한 결과, 기준치 이하이면 적당한 근육 두께 및 근육내 지방함량을 가진 고급육으로 판단할 수 있다.In the present invention, when judging the results using the high-quality meat selection method of the Hanwoo, the grade of the high-quality meat can be designated based on the amount of protein detected between the time of muscle development and the time of fat development based on the appropriate criteria. In other words, when the biomarker is detected based on a specific detection amount, the biomarker may be determined to be high-quality meat having an appropriate muscle thickness and intramuscular fat content if it is lower than the reference value.

본 발명의 다른 양태에 따르면, 본 발명은 상기 바이오마커 단백질 또는 그 면역원성 단편에 특이적으로 결합하는 항체를 유효성분으로 포함하는 한우 고급육 선별용 진단키트를 제공한다.According to another aspect of the present invention, the present invention provides a diagnostic kit for selection of high-quality beef cattle, comprising an antibody that specifically binds to the biomarker protein or immunogenic fragment thereof.

본 발명의 진단키트는 당업자에 알려진 종래의 제조방법에 의해 제조되며, 전형적으로 동결건조형태의 항체와 버퍼, 안정화제, 불활성 단백질 등을 포함한다. 상기 항체는 방사종(radionuclides), 형광원(fluorescors), 효소(enzymes) 등에 의해 표지화될 수 있다.Diagnostic kits of the present invention are prepared by conventional methods known to those skilled in the art, and typically include lyophilized antibodies, buffers, stabilizers, inactive proteins and the like. The antibody can be labeled by radionuclides, fluorescors, enzymes, and the like.

본 발명의 단일클론항체는 immunoassay 키트(ELISA, antibody coated tube test, lateral-flow test, potable biosensor)에 다양하게 이용될 수 있을 뿐만 아니라, 보다 높은 특이도와 민감도를 나타내는 항체의 개발을 통한 다양한 경제형질 스펙트럼을 갖는 단백질칩 개발에도 이용될 수 있다.Monoclonal antibodies of the present invention can be used in a variety of immunoassay kits (ELISA, antibody coated tube test, lateral-flow test, potable biosensor), as well as various economic traits through the development of antibodies showing higher specificity and sensitivity It can also be used to develop protein chips with a spectrum.

이하, 실시예를 통하여 본 발명을 더욱 상세히 설명하기로 한다. 이들 실시예는 단지 본 발명을 예시하기 위한 것이므로, 본 발명의 범위가 이들 실시예에 의해 제한되는 것으로 해석되지는 않는다.Hereinafter, the present invention will be described in more detail with reference to Examples. These embodiments are only for illustrating the present invention, and thus the scope of the present invention is not construed as being limited by these embodiments.

실시예 1. 한우 등심 내 단백질 추출Example 1 Protein Extraction in Korean Beef Sirloin

본 발명에 이용된 공시동물은 총 100여두의 거세 한우 중 체중과 연령 및 생리 지표가 동일한 개체 20두를 선발하였고 근육 발달시기(11개월령)와 지방발달시기(17개월령)에서 등심판정부위인 13번째 늑골부위를 Spring-loaded biopsy instrument(Biotech Nitra, Slovak)를 이용하여 biopsy 한 뒤 액체질소에 즉시 냉동시키고 분석 전 까지 -80℃에 보관하였다. 시료준비(Sample preparation) 과정은 등심조직 300mg을 3ml의 lysis solution에 넣고 1~2분 이내로 균질화(homogenizer, IKA, Germany)한다. lysis solution 조성은 7M Urea, 2.8M Thiourea, 4% CHAPS, 0.002% BPB, 65mM DTT, 2% IPG buffer(3-10 NL), 1X Nuclease MIX, 1X Protease inhibitor를 사용하였다. homogenization후 1시간 동안 실온에서 incubation한 후 14,000g, 20℃에서 30분 동안 centrifugation하여 상층액 만을 회수하여 사용하였다.The test animals used in the present invention were selected from a total of 100 castrated Hanwoo cattle, 20 individuals with the same weight, age and physiological index, and were judged at the time of muscle development (11 months old) and fat development (17 months old). The first rib area was biopsyed using a Spring-loaded biopsy instrument (Biotech Nitra, Slovak) and immediately frozen in liquid nitrogen and stored at -80 ° C until analysis. In the sample preparation process, 300 mg of sirloin tissue is added to 3 ml of lysis solution and homogenized within 1 to 2 minutes (homogenizer, IKA, Germany). The lysis solution composition was 7M Urea, 2.8M Thiourea, 4% CHAPS, 0.002% BPB, 65mM DTT, 2% IPG buffer (3-10 NL), 1X Nuclease MIX, 1X Protease inhibitor. After incubation at room temperature for 1 hour after homogenization, only the supernatant was recovered by centrifugation at 14,000 g and 20 ° C. for 30 minutes.

실시예 2. 근육 및 지방 발달 시기에 있어서 혈액성상 및 초음파 비교Example 2 Comparison of Blood Characteristics and Ultrasound in the Muscle and Fat Development Period

근육 발달시기(11개월령) 10두와 지방발달시기(17개월령) 10두를 성장시기별 혈중 생리지표를 확인하고, 그 결과를 하기 표 1과 2에 나타내었다.The blood development period (11 months of age) 10 heads and fat development (17 months old) 10 heads of blood physiological index was confirmed by growth period, the results are shown in Table 1 and 2.

[표 1]. 근육 및 지방 발달 시기에 있어서 혈액성상TABLE 1 Blood characteristics in the development of muscle and fat

Figure 112008011244295-pat00001
Figure 112008011244295-pat00001

* 데이타는 10두 평균± 표준편차* Data are mean 10 standard ± standard deviation

[표 2]. 근육 및 지방 발달 시기에 있어서 초음파 결과TABLE 2 Ultrasound Results in Timing of Muscle and Fat Development

Figure 112008011244295-pat00002
Figure 112008011244295-pat00002

* 데이타는 10두 평균± 표준편차* Data are mean 10 standard ± standard deviation

표 1에서, 혈액성상은 성장시기별 혈중 생리지표가 정상적임을 나타내고 있다. 또한, 표 2는 초음파를 통하여 근육내 지방이 증가되었다는 것을 나타내는 것으로, 이러한 초음파 수치가 높아지면 근육내 지방이 증가되었음을 나타낸다. 즉, 표 2의 초음파를 이용한 근내지방도 측정에서 1.0은 근육내 지방이 전혀 없다는 뜻이고 2.1은 근육내 지방이 축적되기 시작되었다는 뜻이다.In Table 1, the blood properties indicate that the blood physiological index of each growth period is normal. In addition, Table 2 shows that the intramuscular fat was increased through the ultrasonic waves, indicating that the intramuscular fat was increased when the ultrasonic level is increased. In other words, in the measurement of intramuscular fat using ultrasound in Table 2, 1.0 means that there is no intramuscular fat and 2.1 means that intramuscular fat began to accumulate.

실시예 3. IEF(1차원 전기영동)과 2-D 전기영동Example 3 IEF (1-D Electrophoresis) and 2-D Electrophoresis

실시예 1에서 추출한 단백질을 2-D quant kit(GE Healthcare, USA)를 사용하여 정량한 후 근육 발달시기(11개월령) 10두와 지방발달시기(17개월령) 10두를 각 개체 및 pooling하여 2차원 전기영동(2-DE)를 실시하였다.The protein extracted in Example 1 was quantified using a 2-D quant kit (GE Healthcare, USA), followed by pooling 10 heads of muscle development (11 months of age) and 10 heads of fat development (17 months of age). Dimensional electrophoresis (2-DE) was performed.

(1) 1차원 전기영동(First-dimension isoelectric focusing, IEF)(1) First-dimension isoelectric focusing (IEF)

조직에서 추출한 단백질 150 μg에 rehydration solution(7M Urea, 2M Thiourea, 2% CHAPS, 0.002% Bromophenol blue, 65mM DTT(Dithiotheitol), 0.5% Pharmalyte(3-10 NL; not linear)으로 rehydration을 실시하였다. 준비된 단백질과 rehydration solution의 mixture를 깨끗한 holder에 loading 한 후 IPG strip(pH 3-10 NL 및 18 cm)을 사용하여 IEF를 다음과 같은 조건에서 실시하였다. 12시간 rehydration 시킨 후 Step 1: 500V, 1시간; Step 2: 1,000V, 1시간; Step3: 8,000V, 7시간, Step4: 500V, holding (총 21시간) 순으로 진행하였다.150 μg of the protein extracted from the tissue was subjected to rehydration with a rehydration solution (7M Urea, 2M Thiourea, 2% CHAPS, 0.002% Bromophenol blue, 65 mM DTT (Dithiotheitol), 0.5% Pharmalyte (3-10 NL; not linear)). After loading the mixture of protein and rehydration solution into a clean holder, IEF was performed using IPG strips (pH 3-10 NL and 18 cm) under the following conditions: 12 hours after rehydration Step 1: 500V, 1 hour Step 2: 1,000V, 1 hour; Step 3: 8,000V, 7 hours, Step 4: 500V, holding (21 hours in total).

(2) 2차원 전기영동(Second-dimension SDS-PAGE)(2) Second-dimension SDS-PAGE

IEF를 마친 후 각 strip은 2단계의 Equilibration 과정을 거친다. 첫 번째 단계는 1% DTT(Dithiotheitol)가 포함된 equilibration buffer에 15분 동안 반응시킨 후, 2번째 단계로 2.5% IAA(Iodoacetamide)가 포함된 equilibration buffer에 15분 동안 반응시켰다. 참고로 equilibration buffer 조성은 다음과 같다. 50mM Tris-HCl, pH8.8, 6M Urea, 30% glycerol, 2% SDS, 0.002% Bromophenol blue를 사 용하였다. Equilibration시킨 각 strip을 12.5% gel 위에 올린 후 0.5% agarose sealing solution으로 나머지 공간을 채웠다. 전기영동 조건은 strip에 있던 단백질이 2-d gel에 안전하게 옮겨질 때 까지 gel 한개 당 2 watt로 전기영동 시킨 후 16watt로 마무리하였다.After the completion of the IEF, each strip goes through a two-step equilibration process. The first step was reacted for 15 minutes in equilibration buffer containing 1% Dithiotheitol (DTT), and the second step was reacted for 15 minutes in equilibration buffer containing 2.5% IAA (Iodoacetamide). For reference, the equilibration buffer composition is as follows. 50mM Tris-HCl, pH8.8, 6M Urea, 30% glycerol, 2% SDS, 0.002% Bromophenol blue were used. Each strip was equilibrated on a 12.5% gel and filled with the remaining space with 0.5% agarose sealing solution. Electrophoresis conditions were completed at 16 watts after electrophoresis at 2 watts per gel until the proteins in the strip were transferred safely to the 2-d gel.

실시예 4. 은(silver) 염색 및 이미지 스캐닝, 분석Example 4 Silver Staining and Image Scanning, Analysis

은 염색방법은 PlusOne silver staining kit(GE Healthcare, USA)을 사용하였다. 참고로 gel 1개당 final volume이 250 ml로 하였다. 첫 단계는 fixation 단계로 ethanol 100 ml과 acetic acid, glacial 25 ml에 3차 증류수로 final volume이 250 ml 되도록 맞춘 후 약 1시간 혹은 over night 시켰다. 다음은 sensitizing 단계로 ethanol 75 ml, sodium thiosulphate 10 ml, sodium acetate(17g) 1packet을 넣어준 후 final volume이 250 ml이 되게 하였다. 30분간 반응시키고 3차 증류수로 10분씩 3회 세척하였다. silver reaction 단계는 2.5%(w/v) silver nitrate solution 25 ml를 넣고 final volume이 250ml이 되게 한 후 실험 직전에 37% formaldehyde를 100 μl 넣고 20분간 반응시킨 후 3차 증류수로 1분씩 3회 세척하였다. developing 단계에서는 sodium carbonate(6.25g) 1packet을 넣어준 후 final volume이 250ml이 되게 하였다. 실험 직전에 37% formaldehyde를 50 μl 넣고 4-6분간 반응시켰다. 마지막으로 stopping 단계에서는 EDTA-Na2·2H20(3.65g) 1packet을 넣고 final volume이 250ml이 되게 하여 10분간 반응시킨 후 staining을 마무리 하였다. Silver staining method was used PlusOne silver staining kit (GE Healthcare, USA). For reference, the final volume per gel was 250 ml. The first step was a fixation step, in which 100 ml of ethanol, 25 ml of acetic acid and glacial were adjusted to 250 ml with tertiary distilled water, followed by about 1 hour or over night. Next, ethanol 75 ml, sodium thiosulphate 10 ml, sodium acetate (17g) 1packet was added in the sensitizing step and the final volume was 250 ml. The reaction was carried out for 30 minutes and washed three times with 10 minutes of distilled water. In the silver reaction step, add 25 ml of 2.5% (w / v) silver nitrate solution to make the final volume 250ml, add 100 μl of 37% formaldehyde just before the experiment, and react for 20 minutes, and wash 3 times with 3 distilled water for 1 minute. It was. In the developing stage, 1packet of sodium carbonate (6.25g) was added and the final volume was 250ml. Immediately before the experiment, 50 μl of 37% formaldehyde was added and reacted for 4-6 minutes. Lastly, in the stopping step, 1packet of EDTA-Na2 · 2H 2 0 (3.65g) was added and the final volume was 250ml for 10 minutes, followed by staining.

Pooling 등심조직에 대한 염색된 gel을 ImageScanner flatbed Scanner를 이용하여 Scan한 후 각 protein spot을 ProteomWeaver(DEFINIENS, Germany)를 통하여 image 분석 후 3배 이상 차이가 나는 특이 spot을 각 개체에서 확인 후 각 개체별로 공동으로 발현되는 1개의 spot을 근육발달시기에서 얻었다(도 1).After scanning the stained gel for pooling fillet tissue using ImageScanner flatbed Scanner, each protein spot was identified by ProteomWeaver (DEFINIENS, Germany) and analyzed for each spot. One spot co-expressed was obtained at the time of muscle development (FIG. 1).

[표 3]. ProteomWeaver에 의한 spot 농도 분석TABLE 3 Spot concentration analysis by ProteomWeaver

Figure 112008011244295-pat00003
Figure 112008011244295-pat00003

상기 데이터는 ProteomWeaver(DEFINIENS, Germany)프로그램을 이용하여 spot분석을 한 수치이며, 상기 표 3에서 나타난 근육 발달 시기와 지방발달시기에서 발현 차이가 나는 spot의 농도 차이는 도 1c에서 확인할 수 있다.The data is a spot analysis value using the ProteomWeaver (DEFINIENS, Germany) program, the difference in the concentration of the spot expression difference in the muscle development time and fat development time shown in Table 3 can be seen in Figure 1c.

실시예 5. 질량분석기를 이용한 단백질 동정Example 5 Protein Identification Using Mass Spectrometry

실시예 4에서 분석된 spot들 중 단백질 발현 정도에 차이가 보이는 것을 선별한 다음, trypsin 처리를 하여 in-gel digestion시키고, MALDI-TOF를 이용하여 해당 단백질을 동정하였으며, 그 결과를 하기 표 4 및 도 2에 나타내었다. 표 4의 데이터는 ProteomWeaver(DEFINIENS, Germany)프로그램을 이용하여 spot분석을 한 수치이다.Among the spots analyzed in Example 4 were selected to show a difference in protein expression level, and then trypsin treatment to in-gel digestion, using the MALDI-TOF to identify the protein, the results are shown in Table 4 and 2 is shown. The data in Table 4 are spot analyzes using the ProteomWeaver (DEFINIENS, Germany) program.

[표 4]. MALDI-TOF에 의한 단백질 동정 결과TABLE 4 Protein Identification Results by MALDI-TOF

Figure 112008011244295-pat00004
Figure 112008011244295-pat00004

상기와 같이 동정된 단백질의 아미노산 서열은 NCBInr 데이터베이스(http;//www.ncbi.nlm.nih.gov/)를 써치하여 villin 2(서열번호 1)를 가짐을 확인하였다.The amino acid sequence of the identified proteins as described above is NCBInr database; was confirmed by having the villin 2 (SEQ ID NO: 1), to search is the (http // www.ncbi.nlm.nih.gov /).

실시예 6. 면역 블로팅을 이용한 한우 등심조직 중 villin 2 검출Example 6 Detection of villin 2 in Hanwoo Fillet Tissues Using Immunoblotting

실시예 2의 2DE분석에서 활용된 Pooling된 등심조직의 단백질을 25mM 트리스(Tris-HCl), 192mM 글리신(Glycine), 0.1% SDS, 20% 메탄올(Methanol)이 포함된 용액 내에서 니트로셀룰로즈 막으로 전이(transfer)시키고 전이된 막을 5% 탈지분유가 함유된 TBS-T(Tris Buffered Saline Tween 20)에서 1시간동안 실온에서 반응시켰다. 이어, 에비캠 제품인 생쥐 1차 항체 IgG(Mouse monoclonal [3C12] to Ezrin, abcam)(1:300)를 4℃에서 overnight하여 반응시키고 TBS-T로 3번 세척한 후 토끼에서 생성된 생쥐 2차 항체 IgG-HRP(Rabbit polyclonal to Mouse IgG-HRP, abcam)(1:2,000)를 1시간 동안 실온에서 반응시켰다. 마지막으로 TBS-T로 3번 세척한다. 그 뒤 상기 니트로셀룰로즈막을 ECL(Enhanced chemiluminescence)과 반응시 켜 X-ray 필름에 감광시켰다(도 3a).The pooled sirloin protein utilized in the 2DE assay of Example 2 was subjected to nitrocellulose membrane in a solution containing 25 mM Tris-HCl, 192 mM Glycine, 0.1% SDS, 20% Methanol. Transferred and transferred membrane was reacted for 1 hour at room temperature in Tri Buffered Saline Tween 20 (TBS-T) containing 5% skim milk powder. Subsequently, the mouse primary antibody IgG (Mouse monoclonal [3C12] to Ezrin, abcam) (1: 300), an Ebicam product, was reacted at 4 ° C. overnight, washed three times with TBS-T, and then produced in rabbits. Antibody IgG-HRP (Rabbit polyclonal to Mouse IgG-HRP, abcam) (1: 2,000) was reacted for 1 hour at room temperature. Finally wash three times with TBS-T. Thereafter, the nitrocellulose membrane was reacted with ECL (Enhanced chemiluminescence) to expose the X-ray film (Fig. 3a).

도 3b에서, 지방발달시기의 등심조직보다 근육발달시기의 등심조직에서 발현량이 3배 이상 증가됨이 확인되어 2DE를 통하여 얻은 결과와 유사한 결과를 보임을 알 수 있었다.In Figure 3b, it was confirmed that the expression level in the sirloin tissue at the time of muscle development is more than three times higher than the loin tissue at the time of fat development, showing a similar result to the results obtained through 2DE.

이상 설명한 바와 같이, 본 발명에 따르면, 단백질 수준에서 한우의 근육발달시기 및 지방발달시기와 관련된 바이오 마커 단백질을 프로테옴분석 기술을 이용하여 선발한 후 이를 활용하여 새로운 개념의 고급육 생산기술을 정착시킬 수 있다. 또한, 고비용의 표현형 위주의 능력검정작업을 최소화함과 동시에 성장 초기에 고급육 선별에 활용하여 형질이 우수한 한우를 확보할 수 있다.As described above, according to the present invention, biomarker proteins related to muscle development time and fat development time of Korean cattle are selected at the protein level by using proteome analysis technology, and then a new concept of high-quality meat production technology can be established. have. In addition, while minimizing the costly phenotypic capacity-testing operation at the same time, it can be used for the selection of high-quality meat in the early stage of growth can ensure a good Hanwoo.

도 1a은 본 발명의 근육발달시기와 지방발달시기에서 발현하는 단백질들의 2차원 전기영동(2DE) 분석결과이다.Figure 1a is a result of two-dimensional electrophoresis (2DE) analysis of the proteins expressed in the muscle development time and fat development time of the present invention.

도 1b는 도 1a의 근육발달시기와 지방발달시기에서 발현 차이가 나는 spot을 확대한 것이다.Figure 1b is an enlarged spot with the difference in expression in the muscle development time and fat development time of Figure 1a.

도 2는 본 발명의 근육발달시기와 지방발달시기에서 발현 차이가 나는 단백질의 MALDI-TOF 분석 결과이다.Figure 2 is a result of MALDI-TOF analysis of the protein expression difference in the muscle development time and fat development time of the present invention.

도 3a와 3b는 본 발명의 근육발달시기와 지방발달시기에서 발현 차이가 나는 단백질의 면역 블로팅 결과이다.Figure 3a and 3b is the result of immune blotting of the protein expression difference in the muscle development time and fat development time of the present invention.

<110> Seoul National University Industry Foundation <120> Protein marker related with the muscle development stage for improving economic traits of Hanwoo <160> 1 <170> KopatentIn 1.71 <210> 1 <211> 581 <212> PRT <213> Bos taurus <400> 1 Met Pro Lys Pro Ile Asn Val Arg Val Thr Thr Met Asp Ala Glu Leu 1 5 10 15 Glu Phe Ala Ile Gln Pro Asn Thr Thr Gly Lys Gln Leu Phe Asp Gln 20 25 30 Val Val Lys Thr Ile Gly Leu Arg Glu Val Trp Tyr Phe Gly Leu Gln 35 40 45 Tyr Val Asp Asn Lys Gly Phe Pro Thr Trp Leu Lys Leu Asp Lys Lys 50 55 60 Val Ser Ala Gln Glu Val Arg Lys Glu Ser Pro Leu Gln Phe Lys Phe 65 70 75 80 Arg Ala Lys Phe Tyr Pro Glu Asp Val Ala Glu Glu Leu Ile Gln Asp 85 90 95 Ile Thr Gln Lys Leu Phe Phe Leu Gln Val Lys Glu Gly Ile Leu Ser 100 105 110 Asp Glu Ile Tyr Cys Pro Pro Glu Thr Ala Val Leu Leu Gly Ser Tyr 115 120 125 Ala Val Gln Ala Lys Phe Gly Asp Tyr Asn Lys Glu Leu His Lys Ala 130 135 140 Gly Tyr Leu Gly Ser Glu Arg Leu Ile Pro Gln Arg Val Met Asp Gln 145 150 155 160 His Lys Leu Thr Arg Asp Gln Trp Glu Asp Arg Ile Gln Val Trp His 165 170 175 Ala Glu His Arg Gly Met Leu Lys Asp Ser Ala Met Leu Glu Tyr Leu 180 185 190 Lys Ile Ala Gln Asp Leu Glu Met Tyr Gly Ile Asn Tyr Phe Glu Ile 195 200 205 Lys Asn Lys Lys Gly Thr Asp Leu Trp Leu Gly Val Asp Ala Leu Gly 210 215 220 Leu Asn Ile Tyr Glu Lys Asp Asp Lys Leu Thr Pro Lys Ile Gly Phe 225 230 235 240 Pro Trp Ser Glu Ile Arg Asn Ile Ser Phe Asn Asp Lys Lys Phe Val 245 250 255 Ile Lys Pro Ile Asp Lys Lys Ala Pro Asp Phe Val Phe Tyr Ala Pro 260 265 270 Arg Leu Arg Ile Asn Lys Arg Ile Leu Gln Leu Cys Met Gly Asn His 275 280 285 Glu Leu Tyr Met Arg Arg Arg Lys Pro Asp Thr Ile Glu Val Gln Gln 290 295 300 Met Lys Ala Gln Ala Arg Glu Glu Lys His Gln Lys Gln Leu Glu Arg 305 310 315 320 Gln Gln Leu Glu Thr Glu Lys Lys Arg Arg Glu Thr Val Glu Arg Glu 325 330 335 Lys Glu Gln Met Met Arg Glu Lys Glu Glu Leu Met Leu Arg Leu Gln 340 345 350 Asp Tyr Glu Glu Lys Thr Arg Lys Ala Glu Lys Glu Leu Ser Asp Gln 355 360 365 Ile Gln Arg Ala Leu Lys Leu Glu Glu Glu Arg Lys Arg Ala Gln Glu 370 375 380 Glu Ala Gly Arg Leu Glu Ala Asp Arg Leu Ala Ala Leu Arg Ala Lys 385 390 395 400 Glu Glu Leu Glu Arg Gln Ala Ala Asp Gln Ile Lys Ser Gln Glu Gln 405 410 415 Leu Ala Thr Glu Leu Ala Glu Tyr Thr Ala Lys Ile Ala Leu Leu Glu 420 425 430 Glu Ala Arg Arg Arg Lys Glu Asn Glu Val Glu Glu Trp Gln Leu Arg 435 440 445 Ala Lys Glu Ala Gln Asp Asp Leu Val Lys Thr Arg Glu Glu Leu His 450 455 460 Leu Val Met Thr Ala Pro Pro Pro Pro Pro Val Tyr Glu Pro Val Asn 465 470 475 480 Tyr His Val His Glu Gly Pro Gln Glu Glu Gly Thr Glu Leu Ser Ala 485 490 495 Glu Leu Ser Ser Glu Gly Ile Leu Asp Asp Arg Asn Glu Glu Lys Arg 500 505 510 Ile Thr Glu Ala Glu Lys Asn Glu Arg Val Gln Arg Gln Leu Met Thr 515 520 525 Leu Thr Ser Glu Leu Ser Gln Ala Arg Asp Glu Asn Lys Arg Thr His 530 535 540 Asn Asp Ile Ile His Asn Glu Asn Met Arg Gln Gly Arg Asp Lys Tyr 545 550 555 560 Lys Thr Leu Arg Gln Ile Arg Gln Gly Asn Thr Lys Gln Arg Ile Asp 565 570 575 Glu Phe Glu Ala Met 580 <110> Seoul National University Industry Foundation <120> Protein marker related with the muscle development stage for          improving economic traits of Hanwoo <160> 1 <170> KopatentIn 1.71 <210> 1 <211> 581 <212> PRT <213> Bos taurus <400> 1 Met Pro Lys Pro Ile Asn Val Arg Val Thr Thr Met Asp Ala Glu Leu   1 5 10 15 Glu Phe Ala Ile Gln Pro Asn Thr Thr Gly Lys Gln Leu Phe Asp Gln              20 25 30 Val Val Lys Thr Ile Gly Leu Arg Glu Val Trp Tyr Phe Gly Leu Gln          35 40 45 Tyr Val Asp Asn Lys Gly Phe Pro Thr Trp Leu Lys Leu Asp Lys Lys      50 55 60 Val Ser Ala Gln Glu Val Arg Lys Glu Ser Pro Leu Gln Phe Lys Phe  65 70 75 80 Arg Ala Lys Phe Tyr Pro Glu Asp Val Ala Glu Glu Leu Ile Gln Asp                  85 90 95 Ile Thr Gln Lys Leu Phe Phe Leu Gln Val Lys Glu Gly Ile Leu Ser             100 105 110 Asp Glu Ile Tyr Cys Pro Pro Glu Thr Ala Val Leu Leu Gly Ser Tyr         115 120 125 Ala Val Gln Ala Lys Phe Gly Asp Tyr Asn Lys Glu Leu His Lys Ala     130 135 140 Gly Tyr Leu Gly Ser Glu Arg Leu Ile Pro Gln Arg Val Met Asp Gln 145 150 155 160 His Lys Leu Thr Arg Asp Gln Trp Glu Asp Arg Ile Gln Val Trp His                 165 170 175 Ala Glu His Arg Gly Met Leu Lys Asp Ser Ala Met Leu Glu Tyr Leu             180 185 190 Lys Ile Ala Gln Asp Leu Glu Met Tyr Gly Ile Asn Tyr Phe Glu Ile         195 200 205 Lys Asn Lys Lys Gly Thr Asp Leu Trp Leu Gly Val Asp Ala Leu Gly     210 215 220 Leu Asn Ile Tyr Glu Lys Asp Asp Lys Leu Thr Pro Lys Ile Gly Phe 225 230 235 240 Pro Trp Ser Glu Ile Arg Asn Ile Ser Phe Asn Asp Lys Lys Phe Val                 245 250 255 Ile Lys Pro Ile Asp Lys Lys Ala Pro Asp Phe Val Phe Tyr Ala Pro             260 265 270 Arg Leu Arg Ile Asn Lys Arg Ile Leu Gln Leu Cys Met Gly Asn His         275 280 285 Glu Leu Tyr Met Arg Arg Arg Lys Pro Asp Thr Ile Glu Val Gln Gln     290 295 300 Met Lys Ala Gln Ala Arg Glu Glu Lys His Gln Lys Gln Leu Glu Arg 305 310 315 320 Gln Gln Leu Glu Thr Glu Lys Lys Arg Arg Glu Thr Val Glu Arg Glu                 325 330 335 Lys Glu Gln Met Met Arg Glu Lys Glu Glu Leu Met Leu Arg Leu Gln             340 345 350 Asp Tyr Glu Glu Lys Thr Arg Lys Ala Glu Lys Glu Leu Ser Asp Gln         355 360 365 Ile Gln Arg Ala Leu Lys Leu Glu Glu Glu Arg Lys Arg Ala Gln Glu     370 375 380 Glu Ala Gly Arg Leu Glu Ala Asp Arg Leu Ala Ala Leu Arg Ala Lys 385 390 395 400 Glu Glu Leu Glu Arg Gln Ala Ala Asp Gln Ile Lys Ser Gln Glu Gln                 405 410 415 Leu Ala Thr Glu Leu Ala Glu Tyr Thr Ala Lys Ile Ala Leu Leu Glu             420 425 430 Glu Ala Arg Arg Arg Lys Glu Asn Glu Val Glu Glu Trp Gln Leu Arg         435 440 445 Ala Lys Glu Ala Gln Asp Asp Leu Val Lys Thr Arg Glu Glu Leu His     450 455 460 Leu Val Met Thr Ala Pro Pro Pro Pro Val Tyr Glu Pro Val Asn 465 470 475 480 Tyr His Val His Glu Gly Pro Gln Glu Glu Gly Thr Glu Leu Ser Ala                 485 490 495 Glu Leu Ser Ser Glu Gly Ile Leu Asp Asp Arg Asn Glu Glu Lys Arg             500 505 510 Ile Thr Glu Ala Glu Lys Asn Glu Arg Val Gln Arg Gln Leu Met Thr         515 520 525 Leu Thr Ser Glu Leu Ser Gln Ala Arg Asp Glu Asn Lys Arg Thr His     530 535 540 Asn Asp Ile Ile His Asn Glu Asn Met Arg Gln Gly Arg Asp Lys Tyr 545 550 555 560 Lys Thr Leu Arg Gln Ile Arg Gln Gly Asn Thr Lys Gln Arg Ile Asp                 565 570 575 Glu Phe Glu Ala Met             580  

Claims (5)

지방발달시기의 등심조직보다 근육발달시기의 등심조직에서 발현이 상대적으로 증가되는, 서열번호 1을 갖는 빌린 2(villin 2) 단백질을 포함하는 한우 고급육 선별용 바이오마커 조성물.Biomarker composition for selection of high-quality beef meat comprising a villin 2 protein having SEQ ID NO: 1, the expression is increased in the loin tissue of the muscle development time than the loin tissue of the fat development time. 제 1항의 바이오마커 단백질 또는 그 면역원성 단편에 특이적으로 결합하는 항체를 유효성분으로 포함하는 한우 고급육 선별용 진단제.A diagnostic agent for screening high quality Korean beef, comprising as an active ingredient an antibody that specifically binds to the biomarker protein of claim 1 or an immunogenic fragment thereof. 제 2항에 있어서, 상기 항체는 모노클로날 항체인 것을 특징으로 하는 한우 고급육 선별용 진단제.According to claim 2, wherein the antibody is a high-quality beef cattle diagnostic, characterized in that the monoclonal antibody. 한우의 등심조직에서 제 1항의 바이오마커 단백질의 존재를 검출하는 단계를 포함하는 한우의 고급육 선별방법.The high-quality meat selection method of Hanwoo comprising the step of detecting the presence of the biomarker protein of claim 1 in the loin tissue of Hanwoo. 제 1항의 바이오마커 단백질 또는 그 면역원성 단편에 특이적으로 결합하는 항체를 유효성분으로 포함하는 한우 고급육 선별용 진단키트.The diagnostic kit for selecting high-quality beef from Hanwoo, comprising an antibody that specifically binds to the biomarker protein of claim 1 or an immunogenic fragment thereof.
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