JP6265891B2 - ヌクレオチド配列データの提供 - Google Patents

ヌクレオチド配列データの提供 Download PDF

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Publication number
JP6265891B2
JP6265891B2 JP2014514165A JP2014514165A JP6265891B2 JP 6265891 B2 JP6265891 B2 JP 6265891B2 JP 2014514165 A JP2014514165 A JP 2014514165A JP 2014514165 A JP2014514165 A JP 2014514165A JP 6265891 B2 JP6265891 B2 JP 6265891B2
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Japan
Prior art keywords
sequence
nucleic acid
data
probe
target
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Expired - Fee Related
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JP2014514165A
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English (en)
Japanese (ja)
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JP2014518638A5 (OSRAM
JP2014518638A (ja
Inventor
デル ザーグ ピーター ジャン バン
デル ザーグ ピーター ジャン バン
ロニー アンベルグ
ロニー アンベルグ
ウィルヘルムス フランシスカス ヨハネス ファルハーフ
ウィルヘルムス フランシスカス ヨハネス ファルハーフ
ペーター ベイヤーレイン
ペーター ベイヤーレイン
ルネ ベッチャー
ルネ ベッチャー
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Koninklijke Philips NV
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Koninklijke Philips NV
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Publication of JP2014518638A publication Critical patent/JP2014518638A/ja
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    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/20—Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search

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  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Medical Informatics (AREA)
  • Theoretical Computer Science (AREA)
  • Evolutionary Biology (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
JP2014514165A 2011-06-07 2012-04-17 ヌクレオチド配列データの提供 Expired - Fee Related JP6265891B2 (ja)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
EP11168968.3 2011-06-07
EP11168968 2011-06-07
EP11195103.4 2011-12-22
EP11195103 2011-12-22
PCT/IB2012/051920 WO2012168803A2 (en) 2011-06-07 2012-04-17 Providing nucleotide sequence data

Publications (3)

Publication Number Publication Date
JP2014518638A JP2014518638A (ja) 2014-08-07
JP2014518638A5 JP2014518638A5 (OSRAM) 2015-06-11
JP6265891B2 true JP6265891B2 (ja) 2018-01-24

Family

ID=46085668

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2014514165A Expired - Fee Related JP6265891B2 (ja) 2011-06-07 2012-04-17 ヌクレオチド配列データの提供

Country Status (5)

Country Link
US (1) US10373705B2 (OSRAM)
EP (1) EP2718866B1 (OSRAM)
JP (1) JP6265891B2 (OSRAM)
CN (1) CN103582887B (OSRAM)
WO (1) WO2012168803A2 (OSRAM)

Families Citing this family (15)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN106687965B (zh) * 2013-11-13 2019-10-01 凡弗3基因组有限公司 用于传送并且预处理测序数据的系统和方法
GB2520763A (en) * 2013-12-02 2015-06-03 Vanadis Diagnostics Ab Nucleic acid probe and method of detecting genomic fragments
AU2014361730B2 (en) * 2013-12-10 2021-02-25 Illumina, Inc. Methods and probes for identifying gene alleles
CN113046413A (zh) * 2014-06-06 2021-06-29 康奈尔大学 从血液特异性靶向捕获人类基因组和转录组区域的方法
US10020300B2 (en) 2014-12-18 2018-07-10 Agilome, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
US10006910B2 (en) 2014-12-18 2018-06-26 Agilome, Inc. Chemically-sensitive field effect transistors, systems, and methods for manufacturing and using the same
US9618474B2 (en) 2014-12-18 2017-04-11 Edico Genome, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
WO2016100049A1 (en) 2014-12-18 2016-06-23 Edico Genome Corporation Chemically-sensitive field effect transistor
US9857328B2 (en) 2014-12-18 2018-01-02 Agilome, Inc. Chemically-sensitive field effect transistors, systems and methods for manufacturing and using the same
US9859394B2 (en) 2014-12-18 2018-01-02 Agilome, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
US10811539B2 (en) 2016-05-16 2020-10-20 Nanomedical Diagnostics, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
EP3458606B1 (en) * 2016-05-17 2025-04-02 DName-iT NV Methods for identification of samples
US20220359038A1 (en) * 2019-10-01 2022-11-10 Koninklijke Philips N.V. Systems and Methods for the Efficient Identification and Extraction of Sequence Paths in Genome Graphs
CN111926065B (zh) * 2020-09-18 2021-01-29 中国科学院上海高等研究院 一种高效的核酸检测和基因测序方法及其装置
WO2023283420A2 (en) * 2021-07-09 2023-01-12 The Board Of Trustees Of The University Of Illinois Therapeutic gene silencing with crispr-cas13

Family Cites Families (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7244559B2 (en) 1999-09-16 2007-07-17 454 Life Sciences Corporation Method of sequencing a nucleic acid
WO2001038580A2 (en) 1999-11-26 2001-05-31 Curagen Corporation Nucleic acid probe arrays
US20010051714A1 (en) 2000-01-10 2001-12-13 Shiping Chen Linear probe carrier
KR20040082273A (ko) 2001-05-21 2004-09-24 아클라라 바이오사이언시스 인코퍼레이티드 단백질 분석을 위한 방법 및 조성물
GB0113358D0 (en) 2001-06-01 2001-07-25 Scient Generics Ltd Enhanced target capture
US20030231986A1 (en) 2002-06-18 2003-12-18 Eastman Kodak Company Micro-array identification means
US20050147976A1 (en) 2003-12-29 2005-07-07 Xing Su Methods for determining nucleotide sequence information
WO2006076650A2 (en) 2005-01-12 2006-07-20 Applera Corporation Compositions, methods, and kits for selective amplification of nucleic acids
CN101333564B (zh) 2007-06-27 2011-02-23 上海仁度生物科技有限公司 提取、纯化靶核酸的方法及其应用
KR20100072185A (ko) 2007-09-24 2010-06-30 녹손 파르마 아게 씨파이브에이 결합형 핵산
EP2620511B1 (en) * 2008-01-17 2018-02-28 Sequenom, Inc. Single molecule nucleic acid sequence analysis processes
WO2010097775A1 (en) 2009-02-27 2010-09-02 Koninklijke Philips Electronics N.V. Genomic selection and sequencing using encoded microcarriers
EP2426214A1 (en) 2010-09-01 2012-03-07 Koninklijke Philips Electronics N.V. Method for amplifying nucleic acids

Also Published As

Publication number Publication date
WO2012168803A2 (en) 2012-12-13
EP2718866A2 (en) 2014-04-16
US20140329690A1 (en) 2014-11-06
US10373705B2 (en) 2019-08-06
WO2012168803A3 (en) 2013-07-04
CN103582887A (zh) 2014-02-12
JP2014518638A (ja) 2014-08-07
CN103582887B (zh) 2017-07-04
EP2718866B1 (en) 2020-09-09

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