JP5126644B2 - Evaluation method of traditional Chinese medicine using gene expression profile - Google Patents

Evaluation method of traditional Chinese medicine using gene expression profile Download PDF

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JP5126644B2
JP5126644B2 JP2006151189A JP2006151189A JP5126644B2 JP 5126644 B2 JP5126644 B2 JP 5126644B2 JP 2006151189 A JP2006151189 A JP 2006151189A JP 2006151189 A JP2006151189 A JP 2006151189A JP 5126644 B2 JP5126644 B2 JP 5126644B2
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estrogen
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亮一 木山
四君 董
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National Institute of Advanced Industrial Science and Technology AIST
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本発明は、遺伝子発現プロファイルを用いて漢方薬やその有効成分を含む医薬品、食品等の活性を評価する技術に関する。   The present invention relates to a technique for evaluating the activity of a herbal medicine, a drug containing the active ingredient, a food, or the like using a gene expression profile.

漢方薬は、長年の経験をもとに薬草などを様々な方法で煎じたり抽出し、含まれる有効成分を効率良くかつ効果的に体内に摂取させることにより、医薬あるいは健康食品としての役割を果たしてきたが、有効成分の数、量、形状(化学修飾や代謝などによる化学構造の変化による物も含む)、あるいは、有効成分の効果を増減する成分の混入割合など、様々な要因によりその効果が影響されるために有効な活性探索及び活性評価並びに品質管理の方法が無かった。特に、HPLC、TLCあるいは質量分析法などによる成分分析は活性や効
果を評価する方法ではないため、有効成分の効果を増減する成分についてはその影響を評価できないという欠点がある。また、漢方薬の成分の特定の酵素の活性への影響を測定したり(特許文献1参照)、動物実験などによるアッセイにより効果を評価する方法もあった。しかしながら、これらの方法は手間や費用がかかるわりに精度が高くないために、より良い技術が求められてきた。特に甘草は、多くの漢方薬に使われる素材(あるいは生薬)であり健康食品にも多く用いられており、気候や産地、あるいは保存法や加工法によりその活性が影響されることが知られている。このような、様々な要因を含むためにその活性評価や品質管理は難しいとされてきた。
Traditional Chinese medicine has played a role as a medicine or health food by decocting and extracting medicinal herbs etc. by various methods based on many years of experience and ingesting the active ingredients contained in the body efficiently and effectively. However, the effect is affected by various factors such as the number, amount, and shape of active ingredients (including those due to chemical modifications and changes in chemical structure due to metabolism), or the mixing ratio of ingredients that increase or decrease the effectiveness of active ingredients. Therefore, there was no effective activity search and activity evaluation and quality control method. In particular, component analysis by HPLC, TLC, mass spectrometry, or the like is not a method for evaluating activity or effect, and therefore has a drawback in that the effect of components that increase or decrease the effect of active ingredients cannot be evaluated. There are also methods for measuring the effect of components of Chinese herbal medicine on the activity of a specific enzyme (see Patent Document 1) and evaluating the effect by an assay based on animal experiments. However, since these methods are time-consuming and expensive and are not highly accurate, better techniques have been demanded. In particular, licorice is a material (or herbal medicine) used in many herbal medicines and is also used in health foods, and its activity is known to be affected by the climate, production area, preservation method and processing method. . Such various factors have been included, making it difficult to evaluate activity and quality control.

漢方薬の有効な活性には、種々のものがあるが、例えば、エストロゲン様活性がある。女性ホルモンの一種であるエストロゲンは、従来よりエストロゲン補充療法として、体のほてり及び性器の萎縮の症状の軽減、及び閉経後の骨粗鬆症の予防等に用いられていた。また、エストロゲンはコレステロールを低下させ、コラーゲンを増加させ、脳神経の老化を防ぎアルツハイマー等の神経性疾患の治療効果もあることが報告されている。しかしながら、エストロゲンの投与は、子宮内膜症や悪性腫瘍等を誘発するというリスクもあった。植物にも植物エストロゲンと呼ばれるエストロゲン様作用を有する物質が微量に存在する。これらの物質は、哺乳動物においてエストロゲン受容体に結合し、エストロゲン様作用を奏する。特に天草等の漢方薬の多くにこのような物質が存在することが知られており、エストロゲンを投与するエストロゲン補充療法に比較し、マイルドな治療を可能にし、上記の副作用をもたらすリスクも少ない。また、植物エストロゲンの効果に着目し、植物エストロゲンが含まれていると謳われている健康食品等も種々市販されている。しかしながら、これらの食品等の中には実際には植物エストロゲンがほとんど含有されていないものも存在した。これらの食品等のエストロゲン様活性を正確に評価することは必ずしも容易ではなかった。   There are various effective activities of Kampo medicines, for example, estrogenic activity. Estrogen, a type of female hormone, has been conventionally used as an estrogen replacement therapy to reduce symptoms of hot flashes and genital atrophy, and to prevent postmenopausal osteoporosis. It has also been reported that estrogen lowers cholesterol, increases collagen, prevents cranial nerve aging, and has therapeutic effects on neurological diseases such as Alzheimer's. However, administration of estrogen also has a risk of inducing endometriosis, malignant tumors, and the like. Plants also contain trace amounts of substances that have an estrogenic effect called plant estrogens. These substances bind to estrogen receptors in mammals and exert estrogenic effects. In particular, it is known that such a substance is present in many traditional Chinese medicines such as Amakusa. Compared with estrogen replacement therapy in which estrogen is administered, mild treatment is possible and there is less risk of causing the above-mentioned side effects. In addition, various health foods that are said to contain phytoestrogens are also commercially available, focusing on the effects of phytoestrogens. However, some of these foods actually contain little phytoestrogens. It was not always easy to accurately evaluate the estrogenic activity of these foods.

一方、種々の活性化合物の活性を、遺伝子発現プロファイルへの影響をDNAマイクロア
レイを用いて測定することにより評価する方法について報告されている。この中には、エストロゲン又はエストロゲン類似活性を有する化学物質により発現が変動するエストロゲン応答遺伝子を用いてエストロゲンやエストロゲンと作用が類似した物質の活性を評価する方法も含まれていた(特許文献2及び3等を参照)。
On the other hand, a method for evaluating the activity of various active compounds by measuring the influence on gene expression profile using a DNA microarray has been reported. This included a method for evaluating the activity of estrogens and substances similar in action to estrogen using estrogen-responsive genes whose expression varies depending on estrogen or a chemical substance having estrogen-like activity (Patent Documents 2 and 2). (See 3 etc.).

特開2003-70496号公報JP 2003-70496 A 特許第3713461号公報Japanese Patent No.3713461 特開2005-323600号公報JP 2005-323600 A

本発明は特定の遺伝子について、漢方薬による前記遺伝子発現プロファイルの変化を調べることにより漢方薬の効果を評価する方法及び評価するためのDNAマイクロアレイ等の
試薬の提供を目的とする。
An object of the present invention is to provide a method for evaluating the effect of a Chinese medicine by examining changes in the gene expression profile caused by the Chinese medicine for a specific gene, and a reagent such as a DNA microarray for evaluation.

本発明は、その問題を解決するために開発した、DNAチップ(遺伝子名は図1にまとめ
た)を用いた漢方生薬である甘草(その成分並びにその成分を含む医薬品・食品・試薬及びそれらの加工品を含む)の活性探索及び評価並びにその品質管理のための方法(以下、「甘草の活性評価の方法」と略す)である。本方法の特徴は、甘草の生物・生理活性の評価を細胞の遺伝子の発現変動を指標に行うものであり、たとえば、後記の実施例で示されるように、エストロゲンの特有な遺伝子発現プロファイルとの相同性を指標に、その相同性の高さや遺伝子機能別の相同性の高さの類似性をもとに甘草の活性を評価する方法をいう。したがって、遺伝子発現プロファイルを得る方法としては、DNAチップでなくても良
く、また、用いる遺伝子に関しては、図1で示される遺伝子の全ての必要はなく、その中の複数の遺伝子を用いても良い。また、甘草の発現プロファイルが取得可能であり、例えばエストロゲンによる発現プロファイルと比較し相関解析を行うことができれば、そのような遺伝子群を用いることも可能である。
The present invention relates to licorice that is a herbal medicine using a DNA chip (gene names are summarized in FIG. 1) developed to solve the problem (its components and pharmaceuticals / food / reagents containing the components and their components). This is a method for activity search and evaluation (including processed products) and quality control thereof (hereinafter abbreviated as “method of licorice activity evaluation”). The feature of this method is that the biological and physiological activity of licorice is evaluated by using the expression variation of cellular genes as an index. For example, as shown in the examples described later, it has a characteristic gene expression profile of estrogen. A method for evaluating the activity of licorice based on the homology as an index and the similarity between the homology and the homology according to gene function. Therefore, the method for obtaining the gene expression profile may not be a DNA chip, and the genes to be used need not be all of the genes shown in FIG. 1, and a plurality of genes may be used. . In addition, an expression profile of licorice can be obtained. For example, if a correlation analysis can be performed in comparison with an expression profile by estrogen, such a gene group can be used.

すなわち、本発明は以下の通りである。
[1] 漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法であって、前記活性成分を生体に適用した場合に発現が変動する遺伝子を用い、評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を生体に適用した場合に得られる前記遺伝子の発現プロファイルと前記活性成分を生体に適用した場合に得られる前記遺伝子の発現プロファイルとを比較することを含む、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法。
[2] 漢方薬が甘草を含む漢方薬である、[1]の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法。
[3] 活性成分がエストロゲン活性又はエストロゲン様活性を有する成分であり、活性成分を生体に適用した場合に発現が変動する遺伝子がエストロゲン応答遺伝子である[1]または[2]の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法。
[4] 活性成分の生体への適用が、該活性成分を含む培地中での細胞の培養により行われる[1]〜[3]のいずれかの漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法。
That is, the present invention is as follows.
[1] A method for evaluating the activity of a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient, using a gene whose expression varies when the active ingredient is applied to a living body, Obtained when the expression profile of the gene obtained by applying the herbal medicine or its active ingredient to be evaluated, or a plant, extract or composition containing the active ingredient to the living body and the active ingredient applied to the living body A method for evaluating the activity of a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient, which comprises comparing the expression profile of the gene.
[2] The method for evaluating the activity of the Chinese medicine of [1] or an active ingredient thereof, or a plant, extract or composition containing the active ingredient, wherein the Chinese medicine is a Chinese medicine containing licorice.
[3] The active ingredient is an ingredient having estrogenic activity or estrogen-like activity, and the gene whose expression varies when the active ingredient is applied to a living body is an estrogen responsive gene [1] or [2] Chinese medicine or its activity A method for evaluating the activity of an ingredient, or a plant, extract or composition containing the active ingredient.
[4] The application of the active ingredient to the living body is performed by culturing cells in a medium containing the active ingredient, including any of the Chinese medicines or active ingredients thereof according to [1] to [3], or the active ingredients thereof A method for evaluating the activity of a plant, extract or composition.

[5] 細胞がMCF-7細胞である[4]の漢方薬若しくはその活性成分、又はその活性成分を
含む植物、抽出物若しくは組成物の活性を評価する方法。
[6] 遺伝子プロファイルを、活性成分を生体に適用した場合に発現が変動する遺伝子またはその断片を固相化したDNAマイクロアレイを用いて得る、[1]〜[5]のいずれかの漢
方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法。
[7] 遺伝子プロファイルを、活性成分を生体に適用した場合に発現が変動する遺伝子またはその断片をターゲットとする定量PCRにより得る、[1]〜[5]のいずれかの漢方薬若
しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法。
[8] 漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性の評価が、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物中の有効活性の探索若しくは評価、又は漢方薬若しくはその活性成分を含
む組成物の品質管理である[1]〜[7]のいずれかの漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法。
[5] The method for evaluating the activity of a Chinese medicine or an active ingredient thereof according to [4], wherein the cells are MCF-7 cells, or a plant, extract or composition containing the active ingredient.
[6] A gene profile is obtained by using a DNA microarray in which a gene whose expression changes when an active ingredient is applied to a living body or a fragment thereof is immobilized, or a herbal medicine of any one of [1] to [5] A method for evaluating the activity of an active ingredient or a plant, extract or composition containing the active ingredient.
[7] A Chinese medicine or active ingredient thereof according to any one of [1] to [5], wherein the gene profile is obtained by quantitative PCR targeting a gene whose expression varies when the active ingredient is applied to a living body or a fragment thereof, Or a method for evaluating the activity of a plant, extract or composition containing the active ingredient.
[8] The evaluation of the activity of a herbal medicine or its active ingredient, or a plant, extract or composition containing the active ingredient is effective in the herbal medicine or its active ingredient, or a plant, extract or composition containing the active ingredient Exploration or evaluation of activity, or quality control of Chinese medicine or a composition containing an active ingredient thereof [1] to [7] any Chinese medicine or its active ingredient, or a plant, extract or composition containing the active ingredient A method for evaluating the activity of objects.

[9] 漢方薬の活性成分を生体に適用した場合に発現が変動する遺伝子が図1に示す115
個のエストロゲン応答遺伝子の少なくとも1個である[1]〜[8]のいずれかの漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法。
[10] 漢方薬の活性成分を生体に適用した場合に発現が変動する遺伝子が図1に示す115個のエストロゲン応答遺伝子の少なくとも5個である[1]〜[8]のいずれかの漢方薬若
しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法。
[11] 図1に示す115個のエストロゲン応答遺伝子の少なくとも1個の遺伝子の塩基配
列の全部または一部を含む、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価するための試薬。
[12] 図1に示す115個のエストロゲン応答遺伝子の少なくとも5個の遺伝子の塩基配
列の全部または一部を含む、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価するための試薬。
[9] The gene whose expression fluctuates when the active ingredient of Chinese medicine is applied to the living body is shown in FIG.
A method for evaluating the activity of a herbal medicine or active ingredient thereof according to any one of [1] to [8], which is at least one of the estrogen-responsive genes, or a plant, extract or composition containing the active ingredient.
[10] The Kampo medicine according to any one of [1] to [8], wherein the gene whose expression varies when the active ingredient of Kampo medicine is applied to a living body is at least 5 of the 115 estrogen response genes shown in FIG. A method for evaluating the activity of an active ingredient or a plant, extract or composition containing the active ingredient.
[11] A herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient, comprising all or part of the base sequence of at least one gene of 115 estrogen responsive genes shown in FIG. Reagent for evaluating activity.
[12] Of a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient, comprising all or part of the base sequence of at least 5 genes of 115 estrogen responsive genes shown in FIG. Reagent for evaluating activity.

[13] 遺伝子の塩基配列の全部または一部が固定化されたDNAマイクロアレイである、[11]または[12]の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出
物若しくは組成物の活性を評価するための試薬。
[14] 遺伝子の塩基配列の全部または一部からなる定量PCR用プライマーセットである
、[11]または[12]の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価するための試薬。
[15] 以下の遺伝子の塩基配列の全部または一部からなる定量PCR用プライマーセット
である、[14]の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価するための試薬。
16. cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
25. ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586 ]
26. protein kinase C, delta (PRKCD) [NM_006254]
30. cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
38. Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
48. trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
67. tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
76. nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
[16] 配列番号1から16に記載のプライマーを含む[15]の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価するための試薬。
[13] A herbal medicine of [11] or [12] or an active ingredient thereof, or a plant, extract or composition containing the active ingredient, which is a DNA microarray in which all or part of the base sequence of the gene is immobilized Reagent for evaluating activity.
[14] A primer set for quantitative PCR consisting of all or part of the base sequence of a gene, [11] or [12] Chinese herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient Reagent for evaluating activity.
[15] The activity of a herbal medicine or its active ingredient according to [14], which is a primer set for quantitative PCR comprising all or part of the base sequence of the following gene, or a plant, extract or composition containing the active ingredient Reagent for evaluation.
16. cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
25. Ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586]
26. protein kinase C, delta (PRKCD) [NM_006254]
30. cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
38. Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
48. trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
67. tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
76. nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
[16] A reagent for evaluating the activity of a Chinese medicine or an active ingredient thereof according to [15] containing the primer set forth in SEQ ID NOs: 1 to 16, or a plant, extract or composition containing the active ingredient.

実施例に示すように、本方法の有効性を示すために、甘草抽出物(検定濃度は図2に示した)で見られる活性がDNAチップを用いた遺伝子発現プロファイル解析(図3)と遺伝
子機能を取り入れた統計解析(図4)で再現された。また、従来有効成分と考えられてきた甘草主要成分であるGlycyrrhizin(グリチルリチン)の示すプロファイルと異なることが示された。さらに、そのプロファイルの相違は、生物学的・生理的に意味のない相違ではなく、生物・生理機能の相違に基づくことをリアルタイム定量RT-PCR(Reverse Transcription-Polymerase Chain Reaction)法による遺伝子の応答解析(図5)、シグナル伝
達系タンパク質Erkのリン酸化反応の解析(図6)、及び、ラットPC12細胞による神経樹
状突起形成能の解析(図7)により示すことができた。
As shown in the Examples, in order to demonstrate the effectiveness of this method, the gene expression profile analysis using a DNA chip (FIG. 3) and the gene found in the licorice extract (the assay concentration is shown in FIG. 2) It was reproduced by statistical analysis incorporating functions (Fig. 4). Moreover, it was shown that it differs from the profile which Glycyrrhizin (glycyrrhizin) which is a licorice main ingredient considered to be an active ingredient conventionally. Furthermore, the differences in profiles are not biologically and physiologically meaningless differences, but are based on differences in biological and physiological functions. Real-time quantitative RT-PCR (Reverse Transcription-Polymerase Chain Reaction) method Analysis (FIG. 5), analysis of the phosphorylation reaction of signal transduction protein Erk (FIG. 6), and analysis of the ability of rat PC12 cells to form neural dendrites (FIG. 7).

これらの結果は、本発明の方法を用いることにより、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物のヒト等の動物に対する有用な生物・生理活性を評価することができることを示す。本発明の方法は、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物について、有用な生物・生理活性の探索、有用な生物・生理活性の大きさ、有用な生物・生理活性における品質管理を可能にする。   These results show that by using the method of the present invention, the useful biological / physiological activity of an herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient in animals such as humans can be evaluated. Show what you can do. The method of the present invention can be used to search for useful biological / physiological activity, useful biological / physiological activity magnitude, useful biological / biological activity for a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient. Allows quality control in physiological activity.

本発明の方法は、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を評価する方法である。漢方薬は生薬をも含む。漢方薬の活性成分とは、ヒト等の動物に対して、有益な生物・生理学的機能を有し、一定の有益な生理的効果をもたらす漢方薬に含まれる有効成分をいう。漢方薬の活性成分を含む組成物とは、漢方薬の活性成分を含み、該活性成分が発揮する生物・生理活性により動物に対して有益な効果をもたらす食品、医薬品、医薬部外品、試薬等をいい、漢方薬や該漢方薬の原料となり得る薬草等の植物の加工品をも含む。食品とは、健康食品、特定保健用食品、栄養機能食品等を含み、食品には飲料品も含まれる。ここで、特定保健用食品とは、食生活において特定の保健の目的で摂取をし、その摂取により当該保健の目的が期待できる旨の表示をする食品をいう。本発明において、評価とは上記の活性成分に基づく有効な生物・生理活性についての評価をいい、評価対象とする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物が前記活性を有しているか否かを検定する活性の探索、評価対象とする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物がどの程度の活性を有するかの評価、評価対象とする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の品質管理を含む。品質管理は、特に活性を有すると表示されている医薬品、医薬部外品、試薬、食品等の組成物が所定の活性を有しているか否かの検定に有用であり、また、それらの組成物の製造工程において、製品又は中間体である組成物が所定の活性を有しているか否かの検定に有用である。ここで、「有効活性」とは、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物が動物に対して何らかの有益な効果をもたらす場合、どの程度の有益な効果をもたらすかを指標にして決めることができる活性をいう。漢方薬によっては、その薬効をもたらす活性成分が特定されていない場合もあり、このような場合、その漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価をすることが困難である。本発明の方法は、たとえ活性成分が特定されていなくても、その活性成分による遺伝子発現の変動を指標にして活性を把握することができるので、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の的確な評価を行うことができる。また、有効な活性の大小は、通常漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物中での活性成分の量に相関する。しかしながら、組成物に含まれる他の成分により有効な活性の効果が減じる場合があり、このような場合は、活性成分の量と有効な活性の大小は相関しない。本発明においては、活性成分の物理化学的な量を測定するのではなく、評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物における動物に対する有効活性の大きさを測定することができるので、他の成分の影響等も加味した上での評価が可能になる。   The method of the present invention is a method for evaluating a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient. Herbal medicine includes herbal medicine. The active ingredient of Kampo medicine refers to an active ingredient contained in Kampo medicine that has a beneficial biological / physiological function and brings certain beneficial physiological effects to animals such as humans. A composition containing an active ingredient of traditional Chinese medicine includes foods, pharmaceuticals, quasi-drugs, reagents, etc. that contain an active ingredient of traditional Chinese medicine and have a beneficial effect on animals due to the biological and physiological activities exhibited by the active ingredient. Good, including herbal medicine and processed products of plants such as medicinal herbs that can be used as raw materials for the herbal medicine. The food includes health food, food for specified health use, nutritional functional food, and the like, and food includes beverages. Here, the food for specified health refers to food that is ingested for the purpose of specific health in the diet and displays that the purpose of the health can be expected by the intake. In the present invention, evaluation refers to evaluation of effective biological / physiological activity based on the above active ingredient, and the herbal medicine or its active ingredient to be evaluated, or the plant, extract or composition containing the active ingredient is Search for activity to test whether it has activity, evaluation, evaluation of Chinese medicine or its active ingredient to be evaluated, or how much activity a plant, extract or composition containing the active ingredient has This includes quality control of the target Chinese herbal medicine or its active ingredient, or a plant, extract or composition containing the active ingredient. Quality control is particularly useful for testing whether or not a composition such as a pharmaceutical, quasi-drug, reagent, food, etc. that is indicated as having an activity has a predetermined activity. In the manufacturing process of a product, it is useful for testing whether or not a composition as a product or an intermediate has a predetermined activity. As used herein, “effective activity” refers to how much beneficial effect is obtained when a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient has any beneficial effect on an animal. This refers to the activity that can be determined using this as an index. Depending on the Kampo medicine, the active ingredient that brings about its medicinal effect may not be specified. In such a case, the herbal medicine or its active ingredient, or the plant, extract or composition containing the active ingredient may be evaluated. Have difficulty. Since the method of the present invention can grasp the activity by using the variation of gene expression due to the active ingredient as an index even if the active ingredient is not specified, it contains the Chinese medicine or its active ingredient, or its active ingredient An accurate assessment of the plant, extract or composition can be made. The magnitude of the effective activity is usually correlated with the amount of the active ingredient in the traditional Chinese medicine or its active ingredient, or the plant, extract or composition containing the active ingredient. However, the effectiveness of the active activity may be reduced by other components contained in the composition, and in such a case, the amount of the active component does not correlate with the magnitude of the effective activity. In the present invention, rather than measuring the physicochemical amount of the active ingredient, the magnitude of the effective activity for animals in the herbal medicine or its active ingredient to be evaluated, or the plant, extract or composition containing the active ingredient. Since it is possible to measure the thickness, it is possible to make an evaluation in consideration of the influence of other components.

本発明において、漢方薬及び漢方薬の活性成分は限定されず、既知のあるいは未知の漢方薬の活性成分に基づく有効活性について本発明の方法を用いて評価することができる。例えば、エストロゲン様活性を有する漢方薬が挙げられる。エストロゲン様活性を有する漢方薬は限定されないが、ヒトのエストロゲン受容体に結合し、ヒトに対してエストロゲンと同等の作用をもたらす、いわゆる植物エストロゲンを含む漢方薬が対象となる。このような漢方薬には甘草、芍薬、牡丹等を原料とする漢方薬が含まれる。   In this invention, the active ingredient of a Chinese medicine and a Chinese medicine is not limited, The effective activity based on the active ingredient of a known or unknown Chinese medicine can be evaluated using the method of this invention. For example, a Chinese medicine having estrogenic activity can be mentioned. Chinese medicines having estrogenic activity are not limited, but Chinese medicines containing so-called phytoestrogens that bind to human estrogen receptors and have an action equivalent to estrogen on humans are targeted. Such herbal medicines include herbal medicines made from licorice, glaze, peony and the like.

ここでいう「エストロゲン様活性」とは、女性ホルモンであるエストロゲンと同等あるいは類似の効果を示す活性を意味するが、エストロゲンは様々なホルモンや成長因子類あるいは個体の成長や免疫反応等様々な生理作用に関わる化学物質に対しても直接的あるいは間接的な相互作用を行うため、その影響を明確に検出・評価することは難しいという問題を持つ。特に、漢方の場合は、様々な成分が複雑に影響しあうので、エストロゲンと同等あるいは類似の効果として検出・評価されない場合もある。また、エストロゲン様活性以外の活性が大きい場合は、エストロゲン様活性が明確に感知されない場合もある。しかし、エストロゲン様活性が細胞に与える影響は、エストロゲン様活性を有する化学物質に対して程度の大小はあるものの共通しているものと考えられ、その影響は遺伝子の発現によって測定することが可能である。したがって、本方法では、他の手法によっても明確なエストロゲン様活性を検出・評価することが可能な化学物質のみならず、他の手法では明確なエストロゲン様活性を検出・評価することが不可能であるが遺伝子発現に対してエストロゲンと同等あるいは類似の影響を示す化学物質に対してもその活性を評価することができる。すなわち、本発明の方法の一態様は、エストロゲンの特有な遺伝子発現プロファイルとの相同性を指標に、その相同性の高さや遺伝子機能別の相同性の高さの類似性をもとに甘草等の漢方薬の活性を評価する方法である。   “Estrogen-like activity” as used herein means an activity that exhibits an effect similar to or similar to that of the female hormone estrogen. Estrogen is a variety of hormones, growth factors, and various physiological factors such as growth and immune responses of individuals. Since direct or indirect interaction is also performed with chemical substances involved in the action, it is difficult to clearly detect and evaluate the influence. In particular, in the case of Kampo, various components affect each other in a complicated manner, so that they may not be detected or evaluated as an effect equivalent to or similar to that of estrogen. In addition, when the activity other than the estrogen-like activity is large, the estrogen-like activity may not be clearly detected. However, the effect of estrogen-like activity on cells is thought to be common to some chemical substances with estrogen-like activity, although it is considered to be common, and the effect can be measured by gene expression. is there. Therefore, in this method, not only chemical substances that can detect and evaluate a clear estrogen-like activity by other methods, but also other methods cannot detect and evaluate a clear estrogen-like activity. The activity can also be evaluated for chemical substances that have the same or similar effects on estrogen as gene expression. That is, one embodiment of the method of the present invention is based on the homology with the characteristic gene expression profile of estrogen as an index, and licorice etc. based on the high homology and similarity of homology by gene function. It is a method to evaluate the activity of traditional Chinese medicine.

本発明の方法においては、漢方薬の活性成分又はその活性成分様活性を有する成分を動物、動物の組織又は動物の細胞等の生体に適用した場合に発現が変動することが判明している遺伝子の発現変動を指標にして漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価を行う。漢方薬の活性成分様活性を有する成分とは、例えば、上記の植物のエストロゲン様活性を有する成分に対する動物のエストロゲンまたはエストロゲンと類似の活性を有する物質を指す。この場合、予め動物においてエストロゲンにより発現が変動する遺伝子群を特定しておく。次いで、評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を動物、動物の組織又は動物の細胞等の生体に適用した場合の該遺伝子群の変動を測定することにより、評価を行うことができる。ここで、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を動物、動物の組織又は動物の細胞等の生体に適用するとは、動物への投与、組織への投与、細胞との接触等をいう。好適には、in vitroにおいて、ヒト細胞等の動物細胞に接触させる。接触は、動物細胞を前記の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の存在下で一定時間培養することをいう。用いる細胞は、特に限定されないが、乳腺、子宮、肝臓、脳及び胃等のヒト等の動物の組織から採取した細胞またはヒト等の動物由来の細胞株を使用することができる。   In the method of the present invention, the expression of a gene whose expression is known to vary when an active ingredient of Chinese herbal medicine or a component having an active ingredient-like activity thereof is applied to a living body such as an animal, animal tissue or animal cell. A herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient is evaluated using the expression fluctuation as an index. The component having an active ingredient-like activity of Chinese herbal medicine refers to, for example, an animal estrogen or a substance having an activity similar to that of an estrogen with respect to the above-mentioned component having an estrogenic activity of a plant. In this case, a gene group whose expression varies with estrogen in an animal is specified in advance. Next, the variation of the gene group is measured when the Chinese medicine to be evaluated or its active ingredient, or a plant, extract or composition containing the active ingredient is applied to a living body such as an animal, animal tissue or animal cell. By doing so, evaluation can be performed. Here, applying Chinese medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient to a living body such as an animal, an animal tissue or an animal cell, administration to an animal, administration to a tissue, This refers to contact with cells. Preferably, it is contacted with an animal cell such as a human cell in vitro. Contacting means culturing animal cells for a certain period of time in the presence of the above-mentioned Chinese medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient. The cells to be used are not particularly limited, but cells collected from tissues of animals such as humans such as mammary gland, uterus, liver, brain and stomach, or cell lines derived from animals such as humans can be used.

漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を動物、動物の組織又は動物の細胞等の生体に適用した後、動物、動物の組織又は動物の細胞等の生体における遺伝子発現の変動を、遺伝子発現のプロファイルを得ることにより測定することができる。遺伝子発現のプロファイルは、上記の特定された遺伝子群の発現レベルを測定することにより得ることができる。発現レベルの測定は、遺伝子の転写産物、すなわちmRNAの測定により行ってもよいし、遺伝子の翻訳産物、すなわちタンパク質の測定により行ってもよい。好ましくは、遺伝子の転写産物の測定により行なう。遺伝子の転写産物には、mRNAから逆転写されて得られたcDNAも含まれる。   After applying a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient to a living body such as an animal, animal tissue or animal cell, the animal, animal tissue or animal cell Variations in gene expression can be measured by obtaining a gene expression profile. The gene expression profile can be obtained by measuring the expression level of the identified gene group. The expression level may be measured by measuring a gene transcription product, ie, mRNA, or by measuring a gene translation product, ie, protein. Preferably, it is carried out by measuring a gene transcription product. A gene transcription product also includes cDNA obtained by reverse transcription from mRNA.

本発明において、発現プロファイルは、例えばDNAチップを用いた方法、DNAマイクロアレイを用いた方法、cDNAサブトラクション法(cDNA subtraction)、ディファレンシャルディスプレイ法(differential display)、リアルタイム定量PCR法等により得ることがで
きる。リアルタイム定量PCRとしては、SAGE(serial analysis of gene expression)、ATAC-PCR法(Kato,K.et al.,Nucl.Acids Res.,25,4694-4696,1997)、Taqman PCR法(SYBR(
登録商標)グリーン法)(Schmittgen TD,Methods25,383-385,2001)、Body Map法(Gene,174,151-158(1996))、Serial analysis of gene expression(SAGE)法(米国特許第527,154号、第544,861号、欧州特許公開第0761822号)、MAGE(Micro-analysis of Gene Expression)(特開2000-232888号)等がある。
In the present invention, the expression profile can be obtained by, for example, a method using a DNA chip, a method using a DNA microarray, a cDNA subtraction method, a differential display method, a real-time quantitative PCR method, or the like. Real-time quantitative PCR includes SAGE (serial analysis of gene expression), ATAC-PCR method (Kato, K. et al., Nucl. Acids Res., 25, 4694-4696, 1997), Taqman PCR method (SYBR (
(Registered trademark) Green method) (Schmittgen TD, Methods 25, 383-385, 2001), Body Map method (Gene, 174, 151-158 (1996)), Serial analysis of gene expression (SAGE) method (US Patent No. 527,154, No. 544,861, European Patent Publication No. 0761822), and MAGE (Micro-analysis of Gene Expression) (Japanese Patent Laid-Open No. 2000-232888).

本発明においては、評価しようとする有効活性を有する活性成分を、動物、動物の組織又は動物の細胞等の生体に適用した場合に発現が変動する特定の遺伝子を選択する。   In the present invention, a specific gene whose expression varies when an active ingredient having an effective activity to be evaluated is applied to a living body such as an animal, an animal tissue, or an animal cell is selected.

このような遺伝子の選択方法としては、包括的な発現解析という点で、DNAチップ又はDNAマイクロアレイを用いて行うのが望ましい。DNAチップは、あらかじめ配列が分かって
いる遺伝子DNA又はESTを基板上にピンヘッドあるいはインクジェットなどを用いてスポッティングするか、あるいは光リソグラフィにより適当な基板上に合成して作製することができる。この際、DNA配列情報は、GenBank等のDNAデータベースから得ることができる。DNAマイクロアレイは、ヒト細胞からcDNAクローンを得て、PCRによりcDNAを増幅させて、
適当な基板上に貼り付けて作製することができる。
Such a gene selection method is preferably performed using a DNA chip or a DNA microarray in terms of comprehensive expression analysis. A DNA chip can be produced by spotting genetic DNA or EST of which the sequence is known in advance using a pin head or an ink jet on a substrate, or by synthesizing it on a suitable substrate by optical lithography. At this time, DNA sequence information can be obtained from a DNA database such as GenBank. DNA microarrays obtain cDNA clones from human cells, amplify the cDNA by PCR,
It can be produced by being attached on a suitable substrate.

これらの方法による解析は、例えば「DNAマイクロアレイと最新PCR法」、細胞工学別冊、 ゲノムサイエンスシリーズ1、村松正明、那波宏之監修、2000年3月16日発行、秀潤社等の記載に従って行うことができる。   Analysis by these methods should be performed according to the description of “DNA microarray and latest PCR method”, separate volume of cell engineering, Genome Science Series 1, supervised by Masaaki Muramatsu, Hiroyuki Nami, published on March 16, 2000, Shujunsha etc. Can do.

ここで、DNAマイクロアレイとは、基板上にDNAを整列(アレイ)固定化させたデバイスを総称していう。基盤の大きさや載せるDNAの密度によって、DNAマクロアレイやDNAマイ
クロアレイに分けられるが、本発明においては、DNAマクロアレイもDNAマイクロアレイも含めてDNAマイクロアレイと呼ぶ。また、整列させるDNAの数にも限定はなく、基板上に少なくとも1つのDNAがスポットされている限りDNAマイクロアレイに含まれる。さらに、DNAマイクロアレイにおいては、基板上にスポットしたDNAを標識したサンプルDNAとハイブ
リダイズさせるが、この標識方法も限られず、蛍光標識、放射性同位体による標識等を含む。
Here, the DNA microarray is a generic term for devices in which DNA is aligned (arrayed) and immobilized on a substrate. Depending on the size of the substrate and the density of the DNA to be loaded, it can be divided into DNA macroarrays and DNA microarrays. In the present invention, both DNA macroarrays and DNA microarrays are called DNA microarrays. Further, the number of DNAs to be aligned is not limited, and the DNAs are included in the DNA microarray as long as at least one DNA is spotted on the substrate. Furthermore, in a DNA microarray, DNA spotted on a substrate is hybridized with a labeled sample DNA, but this labeling method is not limited, and includes fluorescent labeling, labeling with a radioisotope, and the like.

本発明で用いる漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を評価するための特定の遺伝子は、例えば、以下のようにcDNAマイクロアレイを利用して特定の遺伝子を選択することができる。最初にヒトEST又は完全長cDNAを得
る。ヒト細胞からcDNAライブラリーを作製して得ることもできるし、また市販の遺伝子セットを利用してもよい。得られたcDNA及びESTをプローブDNAとして、市販のアレイ機を用いてスライドガラス上にスポットする。用いるスライドガラスは、例えばポリLリシン処
理したものを用いる。固定化に用いるDNAは例えば3×SSCに溶解させスポットする。その
濃度には限定はないが、濃度0.5μg/μl〜1μg/μl以上が望ましい。例えば4cm2のスライドガラスならば、直径約100〜400μmでスポットすることにより、1枚当たり10000種類以
上のDNAを固定化することができる。固定化を行った後には、リハイドレーション(rehydration)、コハク酸によるブロッキング等により後処理を行う。なお、本発明において遺伝子という場合、ESTも含む。
The specific gene for evaluating a herbal medicine or its active ingredient used in the present invention, or a plant, extract or composition containing the active ingredient is selected using a cDNA microarray as follows, for example. can do. First, human EST or full-length cDNA is obtained. A cDNA library can be prepared from human cells, or a commercially available gene set may be used. The obtained cDNA and EST are used as probe DNA and spotted on a slide glass using a commercially available array machine. As the slide glass to be used, for example, a glass treated with poly-L-lysine is used. For example, DNA used for immobilization is dissolved in 3 × SSC and spotted. The concentration is not limited, but a concentration of 0.5 μg / μl to 1 μg / μl or more is desirable. For example, if a glass slide of 4 cm 2 is used, spotting at a diameter of about 100 to 400 μm can immobilize 10000 or more kinds of DNA per sheet. After immobilization, post-treatment is performed by rehydration, blocking with succinic acid, and the like. In the present invention, the term “gene” includes EST.

漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価しようとする有効活性を有している物質を動物、動物の組織又は動物の細胞等の生体に適用し、刺激する。ここで、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価しようとする有効活性を有している物質とは、漢方薬の特定の成分、漢方薬の該特定成分を含む抽出物、漢方薬の該特定成分を含む組成物、漢方薬の該特定成分と同等の活性を有する物質等をいう。漢方薬の該特定成分と同等の活性を有する物質としては、該特定成分の類似体、誘導体等がある。これらの物質で刺激した動物の細胞及び刺激しない細胞からトータルmRNAを抽出する。mRNAの調製は、グアニジンチ
オシアネート/塩化セシウム法などにより全RNAを抽出した後、オリゴdT−セルロースや
ポリU−セファロース等を用いたアフィニティーカラム法により、あるいはバッチ法によ
りポリ(A)+RNA(mRNA)を得ることにより行える。このようにして得られたmRNAを鋳型
として、オリゴdTプライマー及び逆転写酵素を用いて一本鎖cDNAを合成する際にcDNAを標識すればよい。標識は、蛍光色素で行い、前記物質で刺激した細胞から得られたcDNA及び刺激しない細胞から得られたcDNAをそれぞれ異なる蛍光色素で標識すればよい。蛍光色素としては、例えば、Amersham Pharmacia Biotech社のCy3(赤色)及びCy5(緑色)が挙げられる。
Apply Chinese herbal medicine or its active ingredient, or a substance having an effective activity to evaluate a plant, extract or composition containing the active ingredient to a living body such as an animal, animal tissue or animal cell, and stimulate To do. Here, a herbal medicine or an active ingredient thereof, or a substance having an effective activity to be evaluated for a plant, extract or composition containing the active ingredient is a specific ingredient of a traditional Chinese medicine or a specific ingredient of a traditional Chinese medicine. An extract containing the same, a composition containing the specific component of Chinese medicine, a substance having an activity equivalent to that of the specific component of Chinese medicine, and the like. Examples of substances having an activity equivalent to that of the specific component of Chinese medicine include analogs and derivatives of the specific component. Total mRNA is extracted from cells of animals stimulated with these substances and unstimulated cells. mRNA is prepared by extracting total RNA by the guanidine thiocyanate / cesium chloride method, etc., and then using an affinity column method such as oligo dT-cellulose or poly U-sepharose, or a batch method to obtain poly (A) + RNA (mRNA ). The cDNA may be labeled when a single-stranded cDNA is synthesized using the thus obtained mRNA as a template using an oligo dT primer and reverse transcriptase. The labeling is performed with a fluorescent dye, and the cDNA obtained from cells stimulated with the substance and the cDNA obtained from unstimulated cells may be labeled with different fluorescent dyes. Examples of fluorescent dyes include Cy3 (red) and Cy5 (green) from Amersham Pharmacia Biotech.

適当なハイブリダイゼーション溶液中のそれぞれの蛍光色素で標識したcDNAをマイクロアレイ上にスポットしたDNAとハイブリダイゼーションさせる。この際のハイブリダイゼ
ーション条件は、所望の感度に応じてハイブリダイゼーション溶液の塩濃度を変化させたり、反応温度を変化させることにより適宜選択することができる。
CDNA labeled with each fluorescent dye in a suitable hybridization solution is hybridized with the DNA spotted on the microarray. The hybridization conditions at this time can be appropriately selected by changing the salt concentration of the hybridization solution or changing the reaction temperature according to the desired sensitivity.

ハイブリダイゼーション後、スライドグラス上の蛍光パターンを蛍光顕微鏡、蛍光検出器(例えば、CHIP READER(商標)(VERTEK社製))等により観察又は測定することにより
、前記物質で刺激した細胞及び刺激しない細胞の発現プロファイルを解析することができる。例えば、前記物質で刺激した細胞から得られたcDNAを赤色のCy3で標識し、刺激しな
い細胞から得られたcDNAを緑色のCy5で標識した場合、刺激した細胞のみで発現する遺伝
子を固定化したマイクロアレイ上のスポットは赤色蛍光を発し、刺激しない細胞のみで発現する遺伝子を固定化したマイクロアレイ上のスポットは緑色蛍光を発し、両細胞で発現する遺伝子を固定化したマイクロアレイ上のスポットは赤と緑の合成色蛍光を発する。上記物質で刺激した場合のCy3の蛍光(赤色蛍光)強度が刺激しない場合のCy5の蛍光(緑色蛍光)強度よりも大きい結果を示すスポットに固定化したDNAは漢方薬若しくはその活性
成分、又はその活性成分を含む植物、抽出物若しくは組成物により発現が高まる遺伝子であり、刺激した場合のCy3の蛍光強度が刺激しない場合のCy5の蛍光強度よりも小さい結果を示すスポットに固定化したDNAは漢方薬若しくはその活性成分、又はその活性成分を含
む植物、抽出物若しくは組成物により発現が抑制される遺伝子である。DNAマイクロアレ
イ上の各スポットのCy3の蛍光強度とCy5の蛍光強度を測定し、例えばCy3/Cy5比を計算し
、該比を指標にこれらの遺伝子について漢方薬又はその成分の効果を評価することができる。この際、DNAマイクロアレイには内部標準遺伝子をスポットしておく。内部標準遺伝
子とハイブリダイズし得るDNAであって、Cy3又はCy5で標識したものをサンプルに添加し
てハイブリダイゼーションを行う。各スポット上のCy3/Cy5比を計算するときに、内部標
準遺伝子のCy3/Cy5比で標準化することにより、各スポットのCy3/Cy5比を補正することができる。また、この際階層クラスター解析等により、発現が変動する遺伝子を解析することもできる。階層クラスター解析は、市販のソフトウェアを用いて行うことができる。
After hybridization, by observing or measuring the fluorescence pattern on the slide glass with a fluorescence microscope, fluorescence detector (for example, CHIP READER (trademark) (manufactured by VERTEK)), etc. The expression profile of can be analyzed. For example, when cDNA obtained from cells stimulated with the above substances is labeled with red Cy3 and cDNA obtained from non-stimulated cells is labeled with green Cy5, a gene that is expressed only in the stimulated cells is immobilized. The spot on the microarray emits red fluorescence, the spot on the microarray in which genes that are expressed only in unstimulated cells are immobilized emits green fluorescence, and the spot on the microarray in which the genes that are expressed in both cells are immobilized is red and green The synthetic color fluorescence is emitted. DNA immobilized on a spot showing a result that the intensity of Cy3 fluorescence (red fluorescence) when stimulated with the above substances is greater than the intensity of Cy5 fluorescence (green fluorescence) when not stimulated is Chinese medicine or its active ingredient, or its activity It is a gene whose expression is increased by a plant, extract or composition containing components, and the DNA immobilized on a spot showing a result that is less than the fluorescence intensity of Cy5 when stimulated when the fluorescence intensity of Cy3 is not stimulated is a Chinese medicine or It is a gene whose expression is suppressed by the active ingredient, or a plant, extract or composition containing the active ingredient. Measure Cy3 fluorescence intensity and Cy5 fluorescence intensity of each spot on the DNA microarray, calculate the Cy3 / Cy5 ratio, for example, and use these ratios as indicators to evaluate the effects of Kampo medicines or their components . At this time, an internal standard gene is spotted on the DNA microarray. Hybridization is performed by adding DNA that can hybridize with the internal standard gene and labeled with Cy3 or Cy5 to the sample. When calculating the Cy3 / Cy5 ratio on each spot, the Cy3 / Cy5 ratio of each spot can be corrected by normalizing with the Cy3 / Cy5 ratio of the internal standard gene. At this time, genes whose expression varies can be analyzed by hierarchical cluster analysis or the like. Hierarchical cluster analysis can be performed using commercially available software.

例えば、漢方薬の活性成分がエストロゲン様活性を有する成分である場合、エストロゲン又はエストロゲン類似活性を有する化学物質により発現が変動するエストロゲン応答遺伝子が選択される。エストロゲン応答遺伝子としては、特許第3713461号公報、特開2002-360249号公報、特開2003-169682号公報、特開2005-312456号公報に記載の遺伝子を用いることができる。また、図1に示す115個のエストロゲン又はエストロゲン類似活性を有す
る化学物質により発現が変動するエストロゲン応答遺伝子が選択され、これらの遺伝子の少なくとも1個、好ましくは5個以上、さらに好ましくは10個以上、さらに好ましくは20個以上、さらに好ましくは30個以上、さらに好ましくは40個以上、さらに好ましくは50個以上、さらに好ましくは60個以上、さらに好ましくは70個以上、さらに好ましくは80個以上、さらに好ましくは90個以上、さらに好ましくは100個以上、さらに好ましくは110個以上、さらに好ましくは115個を用いて漢方薬若しくはその活性成分、又はその活性成分を
含む植物、抽出物若しくは組成物の効果を評価することができる。エストロゲン応答遺伝子には、エストロゲン又はエストロゲン類似活性を有する化学物質により発現が亢進する
遺伝子も発現が減弱する遺伝子も含まれる。
For example, when the active ingredient of Chinese medicine is an ingredient having an estrogenic activity, an estrogen responsive gene whose expression varies depending on an estrogen or a chemical substance having an estrogen-like activity is selected. As the estrogen responsive gene, genes described in Japanese Patent No. 3371461, Japanese Patent Application Laid-Open No. 2002-360249, Japanese Patent Application Laid-Open No. 2003-169682, and Japanese Patent Application Laid-Open No. 2005-312456 can be used. In addition, 115 estrogen or estrogen responsive genes whose expression varies with chemical substances having estrogen-like activity shown in FIG. 1 are selected, and at least one of these genes, preferably 5 or more, more preferably 10 or more. More preferably, 20 or more, more preferably 30 or more, more preferably 40 or more, more preferably 50 or more, more preferably 60 or more, more preferably 70 or more, more preferably 80 or more, More preferably 90 or more, more preferably 100 or more, more preferably 110 or more, more preferably 115 using herbal medicine or an active ingredient thereof, or the effect of a plant, extract or composition containing the active ingredient Can be evaluated. The estrogen responsive gene includes a gene whose expression is enhanced by a chemical substance having estrogen or an estrogen-like activity and a gene whose expression is attenuated.

図1には、用いた遺伝子のGenBankデータベース掲載のUniGene名とAccession No.を示
した。また、クラスター解析の分類に用いた遺伝子機能のグループ名を示した。
FIG. 1 shows the UniGene name and Accession No. of the gene used in the GenBank database. Moreover, the group name of the gene function used for classification of cluster analysis was shown.

図1に示すエストロゲン応答遺伝子は、遺伝子の機能別に分類することができる。すなわち、酵素をコードする遺伝子(グループ名:enzyme、遺伝子番号1〜24)、キナーゼをコードする遺伝子(グループ名:kinase、遺伝子番号25〜31)、受容体をコードする遺伝子(グループ名:receptor、遺伝子番号32および33)、シグナル伝達に関与する遺伝子(グループ名:signaling、遺伝子番号34〜50)、アポトーシスに関与する
遺伝子(グループ名:apoptosis、遺伝子番号51および52)、細胞周期に関与する遺
伝子(グループ名:cell cycle、遺伝子番号53および54)、分化に関与する遺伝子(グループ名:differentiation、遺伝子番号55および56)、細胞増殖に関与する遺伝
子(グループ名:proliferation、遺伝子番号57〜68)、転写に関与する遺伝子(グ
ループ名:transcription、遺伝子番号69〜79)、カルシウム結合に関する遺伝子(
グループ名:calcium、遺伝子番号80〜83)、プロセシングに関与する遺伝子(グル
ープ名:processing、遺伝子番号84〜86)、翻訳に関与する遺伝子(グループ名:translation、遺伝子番号87及び88)、輸送に関与する遺伝子(グループ名:transport、遺伝子番号89〜97)、膜に関与する遺伝子(グループ名:membrane、遺伝子番号98および99)、タンパク質のフォールディングに関与する遺伝子(グループ名:protein folding、遺伝子番号100〜102)、構造に関与する遺伝子(グループ名:structure、遺伝子番号103および104)及び機能未知の遺伝子(グループ名:unknown、遺
伝子番号105〜115)の17のグループに分けられる。
The estrogen responsive genes shown in FIG. 1 can be classified according to gene function. That is, a gene encoding an enzyme (group name: enzyme, gene numbers 1 to 24), a gene encoding a kinase (group name: kinase, gene numbers 25 to 31), a gene encoding a receptor (group name: receptor, Gene numbers 32 and 33), genes involved in signal transduction (group name: signaling, gene numbers 34-50), genes involved in apoptosis (group name: apoptosis, gene numbers 51 and 52), genes involved in the cell cycle (Group name: cell cycle, gene numbers 53 and 54), genes involved in differentiation (group name: differentiation, gene numbers 55 and 56), genes involved in cell proliferation (group name: proliferation, gene numbers 57-68) , Genes involved in transcription (group name: transcription, gene numbers 69-79), calci Gene on no bond (
Group name: calcium, gene number 80-83), genes involved in processing (group name: processing, gene numbers 84-86), genes involved in translation (group name: translation, gene numbers 87 and 88), transport Genes involved (group name: transport, gene numbers 89-97), genes involved in membranes (group name: membrane, gene numbers 98 and 99), genes involved in protein folding (group name: protein folding, gene number) 100 to 102), 17 groups of genes involved in the structure (group name: structure, gene numbers 103 and 104) and genes of unknown function (group name: unknown, gene numbers 105 to 115).

図1中、遺伝子の名称はUniGeneのSymbolで示してあるが、各遺伝子のdescriptionは以下の通りである。以下には上記17のグループごとに遺伝子番号とともに遺伝子を示してある。[]内は、GenBank登録番号を示す。これらの遺伝子は、図1に記載のGenBank登録番号に基づいてデータベースより、配列情報を得ることができる。さらに、これらの遺伝子はバリアントを有する場合もあり、本発明で用いる遺伝子には上記遺伝子のバリアントも含まれる。なお、遺伝子は遺伝子断片を用いることができ、同じ遺伝子の複数の部位の断片を用いてもよい。一般的に、同じ遺伝子でも複数の部位をプローブとして用いることにより、DNAチップの信頼性が高まることが知られている。どの部分がプローブとして適当
かは遺伝子によって異なる。従って、各遺伝子について1つの部位をプローブとして用いても十分信頼性のある結果を得ることができるが、遺伝子によっては、複数の部位をプローブとして用いることにより、さらに、結果の信頼性が高まることが期待できる。断片の塩基長は、10〜200bp、好ましくは10〜100bp、さらに好ましくは10〜50bp、さらに好ましくは15〜25bpである。例えば、図1の115個の遺伝子中、遺伝子番号34の遺伝子(insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599])は同じ遺伝子の別部分の3つの断片を用いてもよい。また、遺伝子番号57の遺伝子(amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657])は同じ遺伝子の別部分の2つの断片を用いてもよい。同様に、遺伝子番号77の遺伝子(transcription elongation factor A (SII), 1 (TCEA1) [NM_006756])も同じ遺伝子の別部分の2つの断片を用いてもよい。さらに、遺伝子番号109の遺伝子(SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341])も同じ遺伝子の別部分の2つの断片を用いてもよい。この場合、本発明においては、120種類の遺伝子またはその断片(プローブ)を用いることができる。
In FIG. 1, the name of the gene is indicated by UniGene Symbol, and the description of each gene is as follows. In the following, genes are shown together with gene numbers for each of the 17 groups. [] Indicates the GenBank registration number. For these genes, sequence information can be obtained from a database based on the GenBank registration number shown in FIG. Furthermore, these genes may have variants, and the genes used in the present invention include variants of the above genes. In addition, a gene fragment can be used for the gene, and fragments of a plurality of sites of the same gene may be used. In general, it is known that the reliability of a DNA chip is increased by using a plurality of sites as probes even in the same gene. Which part is suitable as a probe depends on the gene. Therefore, a sufficiently reliable result can be obtained even if one site is used as a probe for each gene. However, depending on the gene, the reliability of the results can be further increased by using a plurality of sites as probes. Can be expected. The base length of the fragment is 10 to 200 bp, preferably 10 to 100 bp, more preferably 10 to 50 bp, more preferably 15 to 25 bp. For example, among the 115 genes in FIG. 1, the gene number 34 gene (insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]) may use three fragments of different parts of the same gene. In addition, the gene number 57 gene (amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]) may use two fragments of different parts of the same gene. Similarly, the gene number 77 gene (transcription elongation factor A (SII), 1 (TCEA1) [NM — 006756]) may also use two fragments of different parts of the same gene. Furthermore, the gene No. 109 gene (SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM — 007341]) may also use two fragments of different parts of the same gene. In this case, 120 kinds of genes or fragments thereof (probes) can be used in the present invention.

グループ名:enzyme
1. phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2)[NM_004563]
2. phosphoserine aminotransferase 1 (PSAT1)[NM_058179]
3. asparagine synthetase (ASNS)[NM_133436]
4. phosphoglycerate dehydrogenase (PHGDH)[NM_006623]
5. serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2)[NM_005412]
6. 24-dehydrocholesterol reductase (DHCR24)[NM_014762]
7. tryptophanyl-tRNA synthetase (WARS) [NM_004184]
8. fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (FUT8) [NM_178155]
9. argininosuccinate synthetase (ASS) [NM_054012]
10. enolase 2 (gamma, neuronal) (ENO2) [NM_001975]
11. enolase 3 (beta, muscle) (ENO3) [NM_001976]
12. fructose-1,6-bisphosphatase 1 (FBP1) [NM_000507]
13. methylenetetrahydrofolate dehydrogenase (NADP+dependent) 2, methenyltetrahydrofolate cyclohydrolase (MTHFD2) [NM_006636]
14. carnitine palmitoyltransferase 1A (liver) (CPT1A) [NM_001876]
15. peptidase (mitochondrial processing) alpha (PMPCA) [NM_015160]
16. cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
17. glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (GOT1) [NM_002079]
18. sorbitol dehydrogenase (SORD) [NM_003104]
19. stearoyl-CoA desaturase (delta-9-desaturase) (SCD) [NM_005063]
20. surfactant, pulmonary-associated protein B (SFTPB) [NM_000542]
21. serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 (SERPINA3) [NM_001085]
22. aconitase 2, mitochondrial (ACO2) [NM_001098]
23. glutamine-fructose-6-phosphate transaminase 1 (GFPT1) [NM_002056]
24. CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol
synthase) (CDIPT) [NM_006319]
Group name: enzyme
1. phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2) [NM_004563]
2. phosphoserine aminotransferase 1 (PSAT1) [NM_058179]
3. asparagine synthetase (ASNS) [NM_133436]
4. phosphoglycerate dehydrogenase (PHGDH) [NM_006623]
5. serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2) [NM_005412]
6. 24-dehydrocholesterol reductase (DHCR24) [NM_014762]
7. tryptophanyl-tRNA synthetase (WARS) [NM_004184]
8. fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (FUT8) [NM_178155]
9. argininosuccinate synthetase (ASS) [NM_054012]
10. enolase 2 (gamma, neuronal) (ENO2) [NM_001975]
11. enolase 3 (beta, muscle) (ENO3) [NM_001976]
12. fructose-1,6-bisphosphatase 1 (FBP1) [NM_000507]
13. methylenetetrahydrofolate dehydrogenase (NADP + dependent) 2, methenyltetrahydrofolate cyclohydrolase (MTHFD2) [NM_006636]
14. carnitine palmitoyltransferase 1A (liver) (CPT1A) [NM_001876]
15. peptidase (mitochondrial processing) alpha (PMPCA) [NM_015160]
16. cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
17. glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (GOT1) [NM_002079]
18. sorbitol dehydrogenase (SORD) [NM_003104]
19. stearoyl-CoA desaturase (delta-9-desaturase) (SCD) [NM_005063]
20. surfactant, pulmonary-associated protein B (SFTPB) [NM_000542]
21. serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 (SERPINA3) [NM_001085]
22. aconitase 2, mitochondrial (ACO2) [NM_001098]
23. glutamine-fructose-6-phosphate transaminase 1 (GFPT1) [NM_002056]
24. CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol
synthase) (CDIPT) [NM_006319]

グループ名:kinase
25. ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586 ]
26. protein kinase C, delta (PRKCD) [NM_006254]
27. unc-51-like kinase 1 (C. elegans) (ULK1) [NM_003565]
28. integrin-linked kinase (ILK) [NM_004517]
29. protein kinase C substrate 80K-H (PRKCSH) [NM_002743]
30. cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
31. phosphoinositide-3-kinase, class 3 (PIK3C3) [NM_002647]
Group name: kinase
25. Ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586]
26. protein kinase C, delta (PRKCD) [NM_006254]
27. unc-51-like kinase 1 (C. elegans) (ULK1) [NM_003565]
28. integrin-linked kinase (ILK) [NM_004517]
29. protein kinase C substrate 80K-H (PRKCSH) [NM_002743]
30. cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
31. phosphoinositide-3-kinase, class 3 (PIK3C3) [NM_002647]

グループ名:receptor
32. poliovirus receptor (PVR) [NM_006505]
33. progesterone receptor (PGR) [NM_000926]
Group name: receptor
32. poliovirus receptor (PVR) [NM_006505]
33. progesterone receptor (PGR) [NM_000926]

グループ名:signaling
34. insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]
35. catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) (CTNND2) [NM_001332]
36. neuropeptide Y receptor Y1 (NPY1R) [NM_000909]
37. protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18) [NM_014369]
38. Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
39. endothelin 2 (EDN2) [NM_001956]
40. stanniocalcin 2 (STC2) [NM_003714]
41. lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP) [NM_00556
7]
42. angiotensin II receptor, type 1 (AGTR1) [NM_000685]
43. proprotein convertase subtilisin/kexin type 6 (PCSK6) [NM_002570]
44. SH3-domain binding protein 5 (BTK-associated) (SH3BP5) [NM_004844]
45. growth differentiation factor 15 (GDF15) [NM_004864]
46. ras homolog gene family, member C (RHOC) [NM_175744]
47. estrogen receptor 1 (ESR1) [NM_000125]
48. trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
49. aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2) [NM_014862]
50. v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) (ERBB2) [NM_004448]
Group name: signaling
34. Insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]
35. catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) (CTNND2) [NM_001332]
36. neuropeptide Y receptor Y1 (NPY1R) [NM_000909]
37. protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18) [NM_014369]
38. Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
39. endothelin 2 (EDN2) [NM_001956]
40. stanniocalcin 2 (STC2) [NM_003714]
41.lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP) [NM_00556
7]
42. angiotensin II receptor, type 1 (AGTR1) [NM_000685]
43. proprotein convertase subtilisin / kexin type 6 (PCSK6) [NM_002570]
44. SH3-domain binding protein 5 (BTK-associated) (SH3BP5) [NM_004844]
45. growth differentiation factor 15 (GDF15) [NM_004864]
46. ras homolog gene family, member C (RHOC) [NM_175744]
47. estrogen receptor 1 (ESR1) [NM_000125]
48. trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
49. aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2) [NM_014862]
50. v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro / glioblastoma derived oncogene homolog (avian) (ERBB2) [NM_004448]

グループ名:apoptosis
51. tribbles homolog 3 (Drosophila) (TRIB3) [NM_021158]
52. tyrosyl-tRNA synthetase (YARS) [NM_003680]
グループ名:cell cycle
53. quiescin Q6 (QSCN6) [NM_002826]
54. cyclin A1 (CCNA1) [NM_003914]
Group name: apoptosis
51. tribbles homolog 3 (Drosophila) (TRIB3) [NM_021158]
52. tyrosyl-tRNA synthetase (YARS) [NM_003680]
Group name: cell cycle
53. quiescin Q6 (QSCN6) [NM_002826]
54. cyclin A1 (CCNA1) [NM_003914]

グループ名:differentiation
55. interferon-related developmental regulator 1 (IFRD1) [NM_001550]
56. matrix Gla protein (MGP) [NM_000900]
Group name: differentiation
55. interferon-related developmental regulator 1 (IFRD1) [NM_001550]
56. matrix Gla protein (MGP) [NM_000900]

グループ名:proliferation
57. amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]
58. insulin-like growth factor binding protein 4 (IGFBP4) [NM_001552]
59. Kruppel-like factor 10 (KLF10) [NM_005655]
60. calpain, small subunit 1 (CAPNS1) [NM_001749]
61. interferon stimulated exonuclease gene 20kDa (ISG20) [NM_002201]
62. tumor-associated calcium signal transducer 2 (TACSTD2) [NM_002353]
63. PDZ domain containing 1 (PDZK1) [NM_002614]
64. ferritin, heavy polypeptide 1 (FTH1) [NM_002032]
65. peripheral myelin protein 22 (PMP22) [NM_000304]
66. lysosomal-associated membrane protein 3 (LAMP3) [NM_014398]
67. tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
68. tetraspanin 1 (TSPAN1) [NM_005727]
Group name: proliferation
57. amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]
58. insulin-like growth factor binding protein 4 (IGFBP4) [NM_001552]
59. Kruppel-like factor 10 (KLF10) [NM_005655]
60. calpain, small subunit 1 (CAPNS1) [NM_001749]
61. interferon stimulated exonuclease gene 20kDa (ISG20) [NM_002201]
62. tumor-associated calcium signal transducer 2 (TACSTD2) [NM_002353]
63. PDZ domain containing 1 (PDZK1) [NM_002614]
64. ferritin, heavy polypeptide 1 (FTH1) [NM_002032]
65. peripheral myelin protein 22 (PMP22) [NM_000304]
66. lysosomal-associated membrane protein 3 (LAMP3) [NM_014398]
67. tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
68. tetraspanin 1 (TSPAN1) [NM_005727]

グループ名:transcription
69. CCAAT/enhancer binding protein (C/EBP), beta (CEBPB) [NM_005194]
70. activating transcription factor 3 (ATF3) [NM_001674]
71. enolase 1, (alpha) (ENO1) [NM_001428]
72. activating transcription factor 3 (ATF3) [NM_004024]
73. early growth response 3 (EGR3) [NM_004430]
74. runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) (RUNX1) [NM_001001890]
75. v-fos FBJ murine osteosarcoma viral oncogene homolog (FOS) [NM_005252]
76. nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
77. transcription elongation factor A (SII), 1 (TCEA1) [NM_006756]
78. general transcription factor II, i (GTF2I) [NM_032999]
79. TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa (TAF9) [NM_003187]
Group name: transcription
69. CCAAT / enhancer binding protein (C / EBP), beta (CEBPB) [NM_005194]
70. activating transcription factor 3 (ATF3) [NM_001674]
71.enolase 1, (alpha) (ENO1) [NM_001428]
72. activating transcription factor 3 (ATF3) [NM_004024]
73. early growth response 3 (EGR3) [NM_004430]
74.runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) (RUNX1) [NM_001001890]
75. v-fos FBJ murine osteosarcoma viral oncogene homolog (FOS) [NM_005252]
76. nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
77. transcription elongation factor A (SII), 1 (TCEA1) [NM_006756]
78. general transcription factor II, i (GTF2I) [NM_032999]
79. TAF9 RNA polymerase II, TATA box binding protein (TBP) -associated factor, 32kDa (TAF9) [NM_003187]

グループ名:calcium
80. EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) [NM_004105]
81. reticulocalbin 1, EF-hand calcium binding domain (RCN1) [NM_002901]
82. cadherin 18, type 2 (CDH18) [NM_004934]
83. S100 calcium binding protein P (S100P) [NM_005980]
Group name: calcium
80. EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) [NM_004105]
81. reticulocalbin 1, EF-hand calcium binding domain (RCN1) [NM_002901]
82.cadherin 18, type 2 (CDH18) [NM_004934]
83. S100 calcium binding protein P (S100P) [NM_005980]

グループ名:processing
84. chromosome 1 open reading frame 19 (C1orf19) [NM_052965]
85. IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (IMP4) [NM_033416]
86. elongation factor Tu GTP binding domain containing 2 (EFTUD2)(U5-116KD) [NM_004247]
Group name: processing
84. chromosome 1 open reading frame 19 (C1orf19) [NM_052965]
85. IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (IMP4) [NM_033416]
86.elongation factor Tu GTP binding domain containing 2 (EFTUD2) (U5-116KD) [NM_004247]

グループ名:translation
87. glycyl-tRNA synthetase (GARS) [NM_002047]
88. eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa (EIF3S9) [NM_003751]
Group name: translation
87. glycyl-tRNA synthetase (GARS) [NM_002047]
88. eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa (EIF3S9) [NM_003751]

グループ名:transport
89. solute carrier family 12 (sodium/potassium/chloride transporters), member 2 (SLC12A2) [NM_001046]
90. solute carrier family 7 (cationic amino acid transporter, y+ system), member
5 (SLC7A5) [NM_003486]
91. solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
(SLC1A4) [NM_003038]
92. solute carrier family 7, (cationic amino acid transporter, y+ system) member
11 (SLC7A11) [NM_014331]
93. lipocalin 2 (oncogene 24p3) (LCN2) [NM_005564]
94. exportin, tRNA (nuclear export receptor for tRNAs) (XPOT) [NM_007235]
95. solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5) [NM_005628]
96. chloride intracellular channel 4 (CLIC4) [NM_013943]
97. transcobalamin I (vitamin B12 binding protein, R binder family) (TCN1) [NM_001062]
Group name: transport
89.solute carrier family 12 (sodium / potassium / chloride transporters), member 2 (SLC12A2) [NM_001046]
90.solute carrier family 7 (cationic amino acid transporter, y + system), member
5 (SLC7A5) [NM_003486]
91.solute carrier family 1 (glutamate / neutral amino acid transporter), member 4
(SLC1A4) [NM_003038]
92.solute carrier family 7, (cationic amino acid transporter, y + system) member
11 (SLC7A11) [NM_014331]
93. lipocalin 2 (oncogene 24p3) (LCN2) [NM_005564]
94. exportin, tRNA (nuclear export receptor for tRNAs) (XPOT) [NM_007235]
95.solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5) [NM_005628]
96. chloride intracellular channel 4 (CLIC4) [NM_013943]
97. transcobalamin I (vitamin B12 binding protein, R binder family) (TCN1) [NM_001062]

グループ名:membrane
98. synaptogyrin 2 (SYNGR2) [NM_004710]
99. transmembrane 4 L six family member 1 (TM4SF1) [NM_014220]
Group name: membrane
98. synaptogyrin 2 (SYNGR2) [NM_004710]
99.transmembrane 4 L six family member 1 (TM4SF1) [NM_014220]

グループ名:protein folding
100. heat shock 70kDa protein 1A (HSPA1A) [NM_005345]
101. heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5) [NM_005347]
102. heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1) (TRA1)[ NM_003299]
Group name: protein folding
100. heat shock 70kDa protein 1A (HSPA1A) [NM_005345]
101. heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5) [NM_005347]
102. heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1) (TRA1) [NM_003299]

グループ名:structure
103. chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1) [NM_006807]
104. H3 histone, family 3B (H3.3B) (H3F3B) [NM_005324]
Group name: structure
103.chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1) [NM_006807]
104. H3 histone, family 3B (H3.3B) (H3F3B) [NM_005324]

グループ名:unknown
105. retinoblastoma binding protein 8 (RBBP8) [NM_002894]
106. tumor protein D52-like 1 (TPD52L1) [NM_003287]
107. absent in melanoma 1 (AIM1) [NM_001624]
108. chromosome 19 open reading frame 21 (C19orf21) [NM_173481]
109. SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341]
110. selenium binding protein 1 (SELENBP1) [NM_003944]
111. KIAA0196 (KIAA0196) [NM_014846]
112. LOC401397 [BC065765]
113. phorbol-12-myristate-13-acetate-induced protein 1 (PMAIP1) [NM_021127]
114. PREDICTED: paternally expressed 10 (PEG10) [XM_496907]
115. DAZ associated protein 2 (DAZAP2) [NM_014764]
Group name: unknown
105. retinoblastoma binding protein 8 (RBBP8) [NM_002894]
106. tumor protein D52-like 1 (TPD52L1) [NM_003287]
107. absent in melanoma 1 (AIM1) [NM_001624]
108. chromosome 19 open reading frame 21 (C19orf21) [NM_173481]
109. SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341]
110. selenium binding protein 1 (SELENBP1) [NM_003944]
111. KIAA0196 (KIAA0196) [NM_014846]
112. LOC401397 [BC065765]
113. phorbol-12-myristate-13-acetate-induced protein 1 (PMAIP1) [NM_021127]
114. PREDICTED: paternally expressed 10 (PEG10) [XM_496907]
115. DAZ associated protein 2 (DAZAP2) [NM_014764]

本発明の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価には、各グループの少なくとも1つの遺伝子を選択し、グループ別に選択さ
れた遺伝子を組合せて用いてもよい。この場合、17のすべてのグループから少なくとも1つの遺伝子を選択してもよい。また、17のグループから少なくとも1つのグループを選択し、選択されたグループからそれぞれ少なくとも1つの遺伝子を選択し組合せて用いてもよい。例えば、上記のenzyme、kinase、receptor、signaling、apoptosis、cell cycle、differentiation、proliferation、transcription、calcium、processing、translation、transport、membrane、protein folding、structure及びunknownの17のグループ
の中から少なくとも1つのグループ、好ましくは2個、3個、4個、5個、6個、7個、8個、9個、10個、11個、12個、13個、14個、15個、16個又は17個のグループを選択し、選択したグループに属する複数の遺伝子群の中から少なくとも1つの遺
伝子を選択し、組合せればよい。17グループの中から、n個のグループを選択し、さら
に各グループからm個の遺伝子を選択した場合、用いる遺伝子の総数はn×m個となる。各
グループから選択する遺伝子の数は同一である必要はない。
For the evaluation of the Chinese medicine of the present invention or an active ingredient thereof, or a plant, extract or composition containing the active ingredient, at least one gene of each group may be selected, and the genes selected for each group may be used in combination. Good. In this case, at least one gene may be selected from all 17 groups. Alternatively, at least one group may be selected from the 17 groups, and at least one gene may be selected from the selected groups and used in combination. For example, at least one of the above 17 groups of enzyme, kinase, receptor, signaling, apoptosis, cell cycle, differentiation, proliferation, transcription, calcium, processing, translation, transport, membrane, protein folding, structure and unknown , Preferably 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, or 17 These groups may be selected, and at least one gene may be selected from a plurality of gene groups belonging to the selected group and combined. When n groups are selected from 17 groups and m genes are selected from each group, the total number of genes used is n × m. The number of genes selected from each group need not be the same.

また、上記機能別グループを関連するグループごとにまとめてもよく、例えば、enzyme、kinase、receptor及びsignalingのグループを1つのグループにまとめ、apoptosis、cell cycle、differentiation及びproliferationのグループを1つのグループにまとめ、calcium、processing、translation及びtransportのグループを1つのグループにまとめ、membrane、protein folding、structure及びunknownを1つのグループにまとめ、6グループについて上記のようにして遺伝子を選択してもよい。   In addition, the above functional groups may be grouped into related groups, for example, the enzyme, kinase, receptor and signaling groups are combined into one group, and the apoptosis, cell cycle, differentiation and proliferation groups are combined into one group. In summary, calcium, processing, translation, and transport groups may be combined into one group, membrane, protein folding, structure, and unknown may be combined into one group, and genes may be selected as described above for six groups.

このようにして得られた遺伝子をスライドガラス上にスポットして、DNAマイクロアレ
イを作製する。
The genes thus obtained are spotted on a slide glass to prepare a DNA microarray.

本発明において、上述の遺伝子には、上述の遺伝子だけでなく上述の遺伝子の塩基配列に相補的な塩基配列を有するDNAとストリンジェントな条件でハイブリダイズするDNAも含まれる。ここで、ストリンジェントな条件とは、いわゆる特異的なハイブリッドが形成され、非特異的なハイブリッドが形成されない条件をいう。例えば、相同性が高いDNA同士
、すなわち60%以上、好ましくは80%以上の相同性を有するDNA同士がハイブリダイズし
、それにより相同性が低い核酸同士がハイブリダイズしない条件が挙げられる。より具体的には、ナトリウム濃度が150〜900mM、好ましくは600〜900mMであり、温度が60〜68℃、好ましくは65℃での条件をいう。
In the present invention, the above gene includes not only the above gene but also a DNA that hybridizes under stringent conditions with a DNA having a base sequence complementary to the base sequence of the above gene. Here, stringent conditions refer to conditions under which so-called specific hybrids are formed and non-specific hybrids are not formed. For example, DNAs having high homology, that is, DNAs having a homology of 60% or more, preferably 80% or more hybridize, whereby nucleic acids having low homology do not hybridize. More specifically, the sodium concentration is 150 to 900 mM, preferably 600 to 900 mM, and the temperature is 60 to 68 ° C, preferably 65 ° C.

さらに、上述の遺伝子の全長を用いてもよいし、一部断片を用いてもよい。一部断片を用いる場合その部分配列の位置は限られず、各遺伝子の連続した部分配列を用いればよい。また断片の長さも限られないが、10〜200bp、好ましくは10〜100bp、さらに好ましくは10〜50bp、さらに好ましくは15〜25bpである。   Furthermore, the full length of the above-mentioned gene may be used, and a partial fragment may be used. When using a partial fragment, the position of the partial sequence is not limited, and a continuous partial sequence of each gene may be used. The length of the fragment is not limited, but is 10 to 200 bp, preferably 10 to 100 bp, more preferably 10 to 50 bp, and still more preferably 15 to 25 bp.

上述の遺伝子の全長配列又は一部配列を適当な基板上に固定化することにより、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価に用いるためのDNAマイクロアレイを作製することができる。   By immobilizing the full-length sequence or a partial sequence of the above-mentioned gene on an appropriate substrate, a DNA microarray for use in evaluating a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient Can be produced.

固定基板としては、ガラス板、石英板、シリコンウェハーなどが挙げられる。基板の大きさとしては、例えば3.5mm×5.5mm、18mm×18mm、22mm×75mmなどが挙げられるが、これは基板上のDNAプローブのスポット数やそのスポットの大きさなどに応じて様々に設定す
ることができる。DNAの固定化方法としては、DNAの種類及び担体の種類に応じて適当な方法が選択される。例えば、固定化するDNAがcDNAやPCR産物の場合、DNAの荷電を利用して
、ポリリジン、ポリエチレンイミン、ポリアルキルアミンなどのポリ陽イオンで表面処理した固相担体に静電結合させたり、アミノ基、アルデヒド基、エポキシ基などの官能基を導入した固相表面に、アミノ基、アルデヒド基、SH基、ビオチンなどの官能基を導入したDNAを共有結合により結合させることもできる。固定化は、上述のようにアレイ機を用い
て行えばよい。このさい固定化する遺伝子として全長を用いてもよいし、一部断片を用いてもよい。一部断片を用いる場合その部分配列の位置は限られず、各遺伝子の連続した部分配列を用いればよい。また断片の長さも限られないが、10〜200bp、好ましくは10〜100bp、さらに好ましくは10〜50bp、さらに好ましくは15〜25bpである。
Examples of the fixed substrate include a glass plate, a quartz plate, and a silicon wafer. Examples of the substrate size include 3.5 mm x 5.5 mm, 18 mm x 18 mm, and 22 mm x 75 mm, but this can be set according to the number of DNA probe spots on the substrate and the size of the spots. can do. As a DNA immobilization method, an appropriate method is selected according to the type of DNA and the type of carrier. For example, when the DNA to be immobilized is a cDNA or PCR product, it can be electrostatically bound to a solid support surface treated with a polycation such as polylysine, polyethyleneimine, or polyalkylamine using the charge of the DNA. A DNA into which a functional group such as an amino group, an aldehyde group, an SH group, or biotin is introduced can be covalently bound to a solid phase surface into which a functional group such as a group, an aldehyde group, or an epoxy group is introduced. Immobilization may be performed using an array machine as described above. In this case, the full length may be used as the gene to be immobilized, or a partial fragment may be used. When using a partial fragment, the position of the partial sequence is not limited, and a continuous partial sequence of each gene may be used. The length of the fragment is not limited, but is 10 to 200 bp, preferably 10 to 100 bp, more preferably 10 to 50 bp, and still more preferably 15 to 25 bp.

漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価は以下に記載の方法で行う。   Evaluation of a Chinese medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient is carried out by the method described below.

例えば、DNAマイクロアレイを用いて行う場合、上述の遺伝子又はその一部断片を固定
化したDNAマイクロアレイを用いて以下のように行う。用いるDNAマイクロアレイには必要に応じて内部標準遺伝子を固定化する。上述の細胞を漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物で刺激する。刺激は、細胞を適当な培地で培養し、該培地に漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を添加しさらに培養することにより行うことができる。添加する濃度に限定はないが、数nMから数十μM添加すればよい。次いで、該培養細胞からmRNAを抽出し、
蛍光色素で標識したmRNA又は蛍光色素で標識したcDNAを作製する。該標識mRNA又はcDNAをマイクロアレイとハイブリダイズさせ、各スポット上の蛍光強度を測定することにより、各スポット上の遺伝子の発現量がわかりどの遺伝子がどの程度発現が抑制され又は誘導されたかを決定することができ発現プロファイルを得ることができる。評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物で得られた発現プロファイルと漢方薬の特定の成分、漢方薬の該特定成分を含む抽出物、漢方薬の該特定成分を含む組成物、漢方薬の該特定成分と同等の活性を有する物質で得られた発現プロファイルとを比較することにより漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価をすることができる。
For example, when using a DNA microarray, it is performed as follows using a DNA microarray in which the above-mentioned gene or a partial fragment thereof is immobilized. An internal standard gene is immobilized on the DNA microarray to be used, if necessary. The above-described cells are stimulated with Chinese medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient. Stimulation can be performed by culturing cells in an appropriate medium, adding Chinese herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient to the medium, and further culturing. The concentration to be added is not limited. Next, mRNA is extracted from the cultured cells,
MRNA labeled with a fluorescent dye or cDNA labeled with a fluorescent dye is prepared. By hybridizing the labeled mRNA or cDNA with a microarray and measuring the fluorescence intensity on each spot, the expression level of the gene on each spot is known and which gene is suppressed or induced. Expression profiles can be obtained. Chinese herbal medicine to be evaluated or its active ingredient, or a plant containing the active ingredient, an expression profile obtained from the extract or composition, a specific ingredient of Chinese medicine, an extract containing the specific ingredient of Chinese medicine, the identification of Chinese medicine A composition containing an ingredient, a herbal medicine or an active ingredient thereof, or a plant, an extract or a composition containing the active ingredient by comparing the expression profile obtained with a substance having an activity equivalent to that of the specific ingredient of the Kampo medicine Can be evaluated.

例えば、漢方薬の活性成分がエストロゲン様活性を有する成分である場合、図1に示す遺伝子を用いて、評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物で得られた発現プロファイルとエストロゲン又はエストロゲン類似活性を有する物質で得られた発現プロファイルを比較すればよい。   For example, in the case where the active ingredient of Chinese medicine is an ingredient having estrogenic activity, the gene shown in FIG. 1 is used to determine the Chinese medicine to be evaluated or its active ingredient, or a plant, extract or composition containing the active ingredient. What is necessary is just to compare the obtained expression profile with the expression profile obtained by the substance which has estrogen or an estrogen-like activity.

発現プロファイルは、上記遺伝子又はその断片をターゲットとするリアルタイムPCR等
の定量PCRによっても得ることができる。例えば、リアルタイムPCRによる解析は、サーマルサイクラーと分光蛍光光度計を一体化した機器、例えばロッシュ社製のLightCycler(商標)により行うことができる。リアルタイムPCRにより、PCR増幅産物の生成過程をリアル
タイムで検出解析することが可能になる。PCR産物を蛍光色素で標識するため、正確な定
量が行えるので、本発明の方法に適する。
The expression profile can also be obtained by quantitative PCR such as real-time PCR targeting the gene or a fragment thereof. For example, the analysis by real-time PCR can be performed with an apparatus in which a thermal cycler and a spectrofluorometer are integrated, for example, LightCycler (trademark) manufactured by Roche. Real-time PCR makes it possible to detect and analyze the production process of PCR amplification products in real time. Since the PCR product is labeled with a fluorescent dye, accurate quantification can be performed, which is suitable for the method of the present invention.

以下にLightCycler(ロシュ・ダイアグノスティックス社)とそれ用のホットスタート
反応溶液キットLightCycler-FastStart DNA Master SYBR Green I(ロシュ・ダイアグノ
スティックス社)を用いた手順を説明する。まず初めにプライマー混合液と鋳型となるcDNA溶液を82℃で5分間熱処理し、氷中で急冷する。次に、H2O 12.6 mL、MgCl2 2.4 mL、10×Light Cycler Mix 2.0mL、鋳型cDNA 1.0mLを混合し、混合溶液を作成する。作成した混合溶液19mLをキャピラリーに分注し、そこにプライマー混合液(10 pmol/mL)を1mL加え
、キャピラリーにふたをする。キャピラリーを遠心用アダプターにのせたまま遠心を1900rpmで10〜15秒間行う。これをLightCyclerのカローセルにセットし、リアルタイムPCRを
行う。以上の操作はできるだけ氷上若しくは4℃で保管しておいた遠心用アダプター上で
行う。解析は、LightCycler Software Ver.3.3(ロシュ・ダイアグノスティックス社)を用いて行うことができる。
The procedure using LightCycler (Roche Diagnostics) and a hot start reaction solution kit LightCycler-FastStart DNA Master SYBR Green I (Roche Diagnostics) will be described below. First, the primer mixture and the template cDNA solution are heat-treated at 82 ° C. for 5 minutes and then rapidly cooled in ice. Next, 12.6 mL of H 2 O, 2.4 mL of MgCl 2 , 2.0 mL of 10 × Light Cycler Mix, and 1.0 mL of template cDNA are mixed to prepare a mixed solution. Dispense 19 mL of the prepared mixed solution into the capillary, add 1 mL of the primer mixture (10 pmol / mL) to it, and cap the capillary. Centrifuge at 1900 rpm for 10-15 seconds with the capillary on the centrifuge adapter. Set this in the LightCycler carousel and perform real-time PCR. Perform these operations on ice or on a centrifuge adapter stored at 4 ° C as much as possible. The analysis can be performed using LightCycler Software Ver.3.3 (Roche Diagnostics).

評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を用いて得られた遺伝子発現プロファイルがあらかじめ漢方薬の特定の成分、漢方薬の該特定成分を含む抽出物、漢方薬の該特定成分を含む組成物、漢方薬の該特定成分と同等の活性を有する物質を用いて得られた遺伝子発現プロファイルと相同性がある場合、すなわち類似している場合に、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物は、有効活性成分を含んでいるか、有効活性成分を有用量含んでいるか、又は品質が優良であると評価することができる。また、用いた遺伝子が機能別にグループ分けできる場合は、遺伝子機能別グループごとに発現プロファイルを比較し、グループごとに相同性を判定し、グループごとの相同性の類似性により、評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を評価することもできる。この際、例えば、遺伝子の各遺伝子の発現程度について判定基準を設定してもよい。   A herbal medicine to be evaluated or an active ingredient thereof, or a plant containing the active ingredient, an extract or a composition obtained by using a gene expression profile in advance is a specific ingredient of a traditional Chinese medicine, an extract containing the specific ingredient of a traditional Chinese medicine, If there is a homology with a gene expression profile obtained using a composition containing the specific component of the Chinese herbal medicine, a substance having an activity equivalent to that of the specific component of the Chinese herbal medicine, that is, if it is similar, An ingredient, or a plant, extract or composition containing the active ingredient can be evaluated as containing an active active ingredient, containing a useful amount of the active active ingredient, or excellent in quality. In addition, if the genes used can be grouped by function, compare the expression profiles for each group by gene function, determine the homology for each group, and evaluate the Chinese medicine to be evaluated based on the similarity of the homology for each group Alternatively, the active ingredient, or a plant, extract or composition containing the active ingredient can be evaluated. At this time, for example, a determination criterion may be set for the expression level of each gene of the gene.

例えば、有効活性成分がエストロゲン様活性成分である場合、図1に示す115個のエス
トロゲン応答遺伝子の少なくとも1個の遺伝子について、評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を用いて発現プロファイルを得て、あらかじめエストロゲンを用いて得られた遺伝子発現プロファイルと比較する。両発現プロファイルが類似していれば、評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物はエストロゲン様活性成分を有しているか、エストロゲン様活性成分を有用量含んでいるか、又は品質が優良であると評価することができる。
For example, when the active active ingredient is an estrogen-like active ingredient, for at least one gene of the 115 estrogen responsive genes shown in FIG. 1, a Chinese medicine to be evaluated or an active ingredient thereof, or a plant containing the active ingredient, An expression profile is obtained using the extract or composition and compared to a gene expression profile previously obtained using estrogen. If both expression profiles are similar, the herbal medicine to be evaluated or its active ingredient, or the plant, extract or composition containing the active ingredient has an estrogenic active ingredient or has an estrogenic active ingredient. It can be assessed that it contains a dose or is of good quality.

発現プロファイルの相同性(類似性)は、例えば、選択した遺伝子について、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価しようとする有効活性を有している物質を用いた場合の各遺伝子の発現レベルと、評価しようとする漢方薬又はその活性成分を含む植物、抽出物若しくは組成物を用いた場合の各遺伝子の発現レベルを測定し、各遺伝子又は各遺伝子グループごとに遺伝子レベルの相関をとり、比較することにより行うことができる。例えば、後述の実施例に記載のようにして比較する。   The homology (similarity) of the expression profile is, for example, a substance having an effective activity to evaluate a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient for a selected gene. Measure the expression level of each gene when using, and the expression level of each gene when using the herbal medicine or plant, extract or composition containing the active ingredient to be evaluated. It can be done by taking a correlation at the gene level for each and comparing. For example, the comparison is made as described in the examples described later.

また、遺伝子発現プロファイルは、蛍光強度等の発現シグナルのパターンが、デジタル数値で又は色を有する画像で記録される。遺伝子発現プロファイルの比較は、例えばパタ
ーン比較ソフトウェアを用いて行うことができ、コックスハザード分析、判別分析等を利用することができる。あらかじめ漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を評価するための判別分析モデルを構築し、該判別分析モデルに評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物から得られた遺伝子発現プロファイルに関するデータを入力し、評価を行うこともできる。例えば、判別分析により判別式を得て、蛍光強度と活性成分の濃度、活性等の有効性を関連付け、判別式に漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の発現シグナル数値を代入することにより、評価することができる。
In addition, the gene expression profile is recorded as an image in which the pattern of an expression signal such as fluorescence intensity is a digital value or a color. Comparison of gene expression profiles can be performed using, for example, pattern comparison software, and Cox hazard analysis, discriminant analysis, or the like can be used. Establishing a discriminant analysis model for evaluating in advance the Kampo medicine or its active ingredient, or a plant, extract or composition containing the active ingredient, and the Kampo medicine or its active ingredient to be evaluated in the discriminant analysis model, or its activity Data relating to gene expression profiles obtained from plants, extracts or compositions containing components can also be input for evaluation. For example, a discriminant is obtained by discriminant analysis, the fluorescence intensity is associated with the effectiveness of the active ingredient concentration, activity, etc., and the herbal medicine or its active ingredient, or the plant, extract or composition containing the active ingredient in the discriminant It can be evaluated by substituting the expression signal value.

本発明は本発明の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を評価する方法により、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を評価するシステムを包含する。   The present invention relates to a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient, according to a method of evaluating a plant, extract or composition containing the active ingredient. Includes a system to evaluate

本発明の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を評価するシステムは、
(a) 評価しようとする漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽
出物若しくは組成物を用いた場合の遺伝子発現プロファイルに関するデータを入力する手段、ここで入力される遺伝子発現プロファイルに関するデータとは、例えば、各遺伝子におけるシグナル数値等の各遺伝子の発現レベルを示すデータである;
(b) 構築した判別モデルを記憶している記憶手段、
(c) (a)の入力手段を用いて入力したデータを(b)の記憶手段に記憶されている判別モデ
ルに適用して、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を評価するためのデータ処理手段、及び
(d) 得られた漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若し
くは組成物の評価を出力する出力手段、
とを含むシステムである。
A system for evaluating the herbal medicine of the present invention or an active ingredient thereof, or a plant, extract or composition containing the active ingredient,
(a) Means for inputting data relating to gene expression profile when using Chinese herbal medicine to be evaluated or its active ingredient, or plant, extract or composition containing the active ingredient, relating to gene expression profile inputted here The data is, for example, data indicating the expression level of each gene such as a signal value in each gene;
(b) storage means for storing the constructed discrimination model;
(c) Applying the data input using the input means of (a) to the discrimination model stored in the storage means of (b), the herbal medicine or its active ingredient, or a plant or extract containing the active ingredient Or data processing means for evaluating the composition, and
(d) an output means for outputting an evaluation of the obtained Chinese herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient;
It is a system including.

(a)のデータを入力する手段は、キーボード又はデータを記憶した外部記憶装置等を含
む。(b)の記憶手段はハードディスク等を含む。データ処理手段は、記憶手段から判別モ
デルを受け取るとともに、入力されたデータを処理して、処理結果を出力手段に送り、出力手段で処理結果が表示される。データ処理手段は、データを演算処理する中央演算処理装置(CPU)等を含む。また、出力手段は、結果を表示するモニタやプリンタを含む。
The means for inputting data in (a) includes a keyboard or an external storage device storing data. The storage means (b) includes a hard disk or the like. The data processing means receives the discrimination model from the storage means, processes the input data, sends the processing result to the output means, and the processing result is displayed by the output means. The data processing means includes a central processing unit (CPU) that performs arithmetic processing on data. The output means includes a monitor and a printer for displaying the result.

本発明のシステムは、市販のパーソナルコンピュータ等を用いて構築することが可能である。   The system of the present invention can be constructed using a commercially available personal computer or the like.

本発明は、さらに、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の評価のために選択された遺伝子の塩基配列からなるヌクレオチド又はその一部配列を含むヌクレオチドを含む、漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物を評価するための試薬又はキットを包含する。該試薬は、前記遺伝子の塩基配列からなるヌクレオチド又はその一部配列を含むヌクレオチドをプローブ又はプライマーとして含む試薬であり、また前記遺伝子の塩基配列からなるヌクレオチド又はその一部配列を含むヌクレオチドを固相化したマイクロアレイ等の基板を含む試薬である。   The present invention further includes a nucleotide comprising a base sequence of a gene selected for evaluation of a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient, or a partial sequence thereof. Or a reagent or kit for evaluating a herbal medicine or an active ingredient thereof, or a plant, extract or composition containing the active ingredient. The reagent is a reagent comprising a nucleotide comprising the nucleotide sequence of the gene or a nucleotide comprising a partial sequence thereof as a probe or primer, and a nucleotide comprising the nucleotide sequence of the gene or a nucleotide comprising a partial sequence thereof is solid-phased. It is a reagent containing a substrate such as a microarray.

例えば、活性成分がエストロゲン様活性成分の場合、この試薬又はキットは、図1に示す115個のエストロゲン応答遺伝子の少なくとも1個、好ましくは5個以上、さらに好ま
しくは10個以上、さらに好ましくは20個以上、さらに好ましくは30個以上、さらに好ましくは40個以上、さらに好ましくは50個以上、さらに好ましくは60個以上、さらに好ましく
は70個以上、さらに好ましくは80個以上、さらに好ましくは90個以上、さらに好ましくは100個以上、さらに好ましくは110個以上、さらに好ましくは115個を含む。
For example, when the active ingredient is an estrogen-like active ingredient, the reagent or kit is at least one, preferably 5 or more, more preferably 10 or more, more preferably 20 of the 115 estrogen responsive genes shown in FIG. More than 30, more preferably 30 or more, more preferably 40 or more, more preferably 50 or more, more preferably 60 or more, more preferably 70 or more, more preferably 80 or more, more preferably 90 More preferably, it contains 100 or more, more preferably 110 or more, and even more preferably 115.

このようなDNAマイクロアレイとして、例えば、EstrArray(Infogenes社製、Inoue A.,
et al., Journal of molecular endocrinology. 2002 Oct; 29(2): 175-192)を用いる
ことができる。EstrArrayには、上記115個の遺伝子を含む約200個のエストロゲン応答性
遺伝子またはその遺伝子の塩基配列の一部配列からなる断片が配列させてある。
As such a DNA microarray, for example, EstrArray (Infogenes, Inoue A.,
et al., Journal of molecular endocrinology. 2002 Oct; 29 (2): 175-192). In EstrArray, about 200 estrogen-responsive genes including the above 115 genes or a fragment consisting of a partial sequence of the base sequence of the gene is arranged.

本発明はさらに、本発明の漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物の活性を評価する方法により漢方薬の活性成分を含み有効な生物・生理活性を有する医薬品、食品又は研究用試薬等の組成物を製造する方法、並びに該方法により製造された医薬品、食品又は研究用試薬等の組成物をも包含する。   The present invention further includes a medicinal herb medicine of the present invention or an active ingredient thereof, or a medicinal product containing an active ingredient of a Chinese herb medicine by a method for evaluating the activity of a plant, extract or composition containing the active ingredient, and having an effective biological / physiological activity, It also includes a method for producing a composition such as a food or research reagent, and a composition such as a pharmaceutical, food or research reagent produced by the method.

本発明を以下の実施例によって具体的に説明するが、本発明はこれらの実施例によって限定されるものではない。   The present invention will be specifically described by the following examples, but the present invention is not limited to these examples.

(1)エストロゲン様活性を評価するための遺伝子
エストロゲン応答遺伝子として図1に記載の115種類の遺伝子を用いた。
なお、遺伝子番号34の遺伝子(insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599])は同じ遺伝子の別部分の3つの断片を用いた。また、遺伝子番号5
7の遺伝子(amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657])は同じ遺伝子の別部分の2つの断片を用い、同様に、遺伝子番号77の遺伝子(transcription elongation factor A (SII), 1 (TCEA1) [NM_006756])も同じ遺伝子の別部分の2つの断片を用いた。さらに、遺伝子番号109の遺伝子(SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341])も同じ遺伝子の別部分の2つの断片を用いた。従って、遺伝子または断片の数としては120個を用いた。
(1) Genes for evaluating estrogenic activity 115 types of genes shown in FIG. 1 were used as estrogen-responsive genes.
In addition, the gene number 34 gene (insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]) used three fragments of different parts of the same gene. Gene number 5
The 7 gene (amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]) uses two fragments of another part of the same gene. Similarly, the gene number 77 (transcription elongation factor A (SII), 1 (TCEA1) [NM_006756]) also used two fragments of different parts of the same gene. Furthermore, the gene No. 109 gene (SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341]) also used two fragments of different parts of the same gene. Therefore, 120 genes or fragments were used.

(2)DNAチップ条件検討のための細胞増殖試験(図2)
甘草抽出物とGlycyrrhizinの各濃度における細胞増殖能をSRB(Sulforhodamine B)試
験(図2A)及びエストロゲン応答因子を用いたレポーター遺伝子試験(図2B)により検定した。対照として、vehicleのみの添加(Control)、及び、エストロゲン(E2:10 nM 17β-estradiol)添加の場合の結果を示した。どちらの試験結果も、甘草抽出物(約10%のGlycyrrhizinを含む)では明確なエストロゲンと同様の細胞増殖活性があるが、Glycyrrhizinではほとんど活性は見られないことを示す。甘草抽出物は、市販の甘草抽出物(アルプス薬品工業株式会社より購入)を1:10で純水に稀釈し、オートクレーブし、滅菌した後使用した。濃度(μg/ml)は抽出物の重量を用いて計算した。
(2) Cell proliferation test for DNA chip condition study (Figure 2)
Cell proliferation ability at each concentration of licorice extract and Glycyrrhizin was assayed by SRB (Sulforhodamine B) test (FIG. 2A) and reporter gene test using estrogen response factor (FIG. 2B). As a control, the result in the case of adding only vehicle (Control) and adding estrogen (E 2 : 10 nM 17β-estradiol) is shown. Both test results show that licorice extract (containing about 10% Glycyrrhizin) has a clear cell proliferative activity similar to estrogen, but Glycyrrhizin shows little activity. As the licorice extract, a commercially available licorice extract (purchased from Alps Pharmaceutical Co., Ltd.) was diluted 1:10 in pure water, autoclaved and used after sterilization. Concentration (μg / ml) was calculated using the weight of the extract.

エストロゲン応答因子を用いたレポーター遺伝子試験は以下のように行った。
ERα遺伝子プロモーター領域(キャップ部位を基点として-838塩基から+214塩基の部位)をベクター(Promega社のpGL3Basicベクター)のKpnI/HindIII部位に挿入して構築したレポーターベクターを用いた。アッセイは、Lipofectamine 2000 (Invitrogen社)を用い
てレポーターベクターをMCF-7細胞に対しトランスフォームした。エストロゲン及び甘草抽出物をMCF-7細胞培地に添加し、24時間培養した後、ルシフェラーゼ活性を測った。本レポーターアッセイは、論文(Inoue A., Journal of Pharmacological and Toxicological Methods, 2002, May-Jun; 47(3): 129-135)に記載の方法により行った。
A reporter gene test using an estrogen response factor was performed as follows.
A reporter vector constructed by inserting an ERα gene promoter region (site from −838 bases to +214 bases from the cap site) into the KpnI / HindIII site of the vector (ProGL pGL3Basic vector) was used. The assay used Lipofectamine 2000 (Invitrogen) to transform the reporter vector into MCF-7 cells. Estrogen and licorice extract were added to MCF-7 cell medium and cultured for 24 hours, and then luciferase activity was measured. This reporter assay was performed by the method described in a paper (Inoue A., Journal of Pharmacological and Toxicological Methods, 2002, May-Jun; 47 (3): 129-135).

(3)甘草抽出物、及び、GlycyrrhizinのDNAチップ解析(図3)
DNAチップ(EstrArray、Infogenes社製)を用いてヒトMCF-7細胞に対する甘草抽出物、Glycyrrhizin、及び、エストロゲン(E2:10 nM 17β-estradiol)の影響評価を行い、図
1で示した115個の遺伝子について遺伝子発現プロファイルを取得した。更に、その結果
をクラスター解析により検討した。遺伝子は機能(グループ名として図1に示した)により分類して、遺伝子発現上昇を濃色、発現減少を淡色で示した(左下に増減の相対値を濃淡スケールで示した)。
(3) Licorice extract and Glycyrrhizin DNA chip analysis (Figure 3)
Using a DNA chip (EstrArray, Infogenes), the influence of licorice extract, Glycyrrhizin, and estrogen (E 2 : 10 nM 17β-estradiol) on human MCF-7 cells was evaluated and 115 cells shown in FIG. Gene expression profiles were obtained for these genes. Furthermore, the results were examined by cluster analysis. Genes were classified by function (shown in FIG. 1 as a group name), and the increase in gene expression was shown in dark color, and the decrease in expression was shown in light color (the relative value of increase / decrease was shown in the lower left on a gray scale).

影響評価は以下の方法で行った。
クラスター解析により、Glycyrrhizin、甘草抽出物、及び、エストロゲンの間のプロファイルの近さを解析した。クラスター解析は、論文(Terasaka S., et al., Toxicology Letters 2006 May 25; 163(2): 130-141)に記載の方法により行った。
The impact evaluation was performed by the following method.
The closeness of the profile between Glycyrrhizin, licorice extract, and estrogen was analyzed by cluster analysis. Cluster analysis was performed by the method described in a paper (Terasaka S., et al., Toxicology Letters 2006 May 25; 163 (2): 130-141).

(4)遺伝子機能を利用したDNAチップ解析結果の評価(図4)
それぞれ、エストロゲンと甘草抽出物(図4A)、エストロゲンとGlycyrrhizin(図4B)、甘草抽出物とGlycyrrhizin(図4C)について、DNAチップ(EstrArray、Infogenes社製)を用いて得た遺伝子発現プロファイルを全ての遺伝子または遺伝子断片(プローブ)(図中「120 genes」と表示)あるいは遺伝子の機能別に比較し、直線近似に基づく相関
係数の値をそれぞれグラフで表示した。
(4) Evaluation of DNA chip analysis results using gene function (Figure 4)
Gene expression profiles obtained using DNA chips (EstrArray, Infogenes) for estrogen and licorice extract (Fig. 4A), estrogen and Glycyrrhizin (Fig. 4B), licorice extract and Glycyrrhizin (Fig. 4C), respectively Each gene or gene fragment (probe) (indicated as “120 genes” in the figure) or gene function was compared, and the correlation coefficient values based on linear approximation were displayed in graphs.

ここで、115遺伝子(120プローブ)、あるいは、図1に示した機能別グループに属す遺伝子に関して、DNAチップを用いて得られた発現プロファイルをそれぞれの試料の組み合
わせの間で相関解析を行い、得られた相関係数をグラフに表示した。相関係数は、統計解析ソフトウエアSPSS 12.0J for Windows(SPSS Japan Inc.)を用いて計算した。
Here, regarding 115 genes (120 probes) or genes belonging to the functional group shown in FIG. 1, the expression profile obtained using the DNA chip was subjected to correlation analysis between the combinations of the respective samples. The correlation coefficient obtained was displayed on a graph. The correlation coefficient was calculated using statistical analysis software SPSS 12.0J for Windows (SPSS Japan Inc.).

遺伝子の機能別分類としては、115遺伝子を「enzyme」、「signaling」(図1の「kinase」、「signaling」、「receptor」に属する遺伝子グループをまとめたもの)、「proliferation」(図1の「apoptosis」、「cell cycle」、「differentiation」、「proliferation」に属する遺伝子グループをまとめたもの)、「transcription」、「transport」
(図1の「calcium」、「transport」、「processing」、「translation」に属する遺伝
子グループをまとめたもの)、「others」(図1の「membrane」、「structure」、「protein folding」、「unknown」に属する遺伝子グループをまとめたもの)の6グループに
再分類した。エストロゲンとGlycyrrhizinの間(図4B)には全遺伝子の間だけでなく特
に統計的に有意な相関を示す機能グループは存在しないが、エストロゲンと甘草抽出物の間(図4A)では、「signaling」、「proliferation」、「transport」に分類される遺伝子の間で統計的に有意でかつ全遺伝子の比較より高い相関を示した。また、甘草抽出物とGlycyrrhizin(図4C)では、「signaling」に分類された遺伝子についてのみ統計的に有意でかつ全遺伝子の比較より高い相関を示した。これは、甘草抽出物はMCF-7細胞におい
てエストロゲンによる応答に特徴的な遺伝子全般の応答を誘起しており、中でもシグナル伝達や細胞増殖、細胞内物質移送に関与する遺伝子には共通性が高いが、一方で、甘草抽出物とGlycyrrhizinの間では、MCF-7細胞で共通のシグナル伝達に関与する遺伝子に影響
を与えるが、それはエストロゲンに対する応答反応とは異なることを示すと考えられる。
As for the classification of genes by function, 115 genes are classified into “enzyme”, “signaling” (a group of gene groups belonging to “kinase”, “signaling”, “receptor” in FIG. 1), “proliferation” (in FIG. 1). "A group of gene groups belonging to" apoptosis "," cell cycle "," differentiation "," proliferation ")," transcription "," transport "
(A group of gene groups belonging to “calcium”, “transport”, “processing”, “translation” in FIG. 1), “others” (“membrane”, “structure”, “protein folding”, “ The gene groups belonging to “unknown” were reclassified into 6 groups). There is no functional group between estrogen and Glycyrrhizin (Fig. 4B) that shows not only a statistically significant correlation, but also between estrogen and licorice extract (Fig. 4A). , “Proliferation” and “transport” were statistically significant and higher than the comparison of all genes. In addition, licorice extract and Glycyrrhizin (FIG. 4C) were statistically significant only for genes classified as “signaling” and showed a higher correlation than the comparison of all genes. This is because licorice extract induces general gene responses that are characteristic of estrogen responses in MCF-7 cells, and is particularly common to genes involved in signal transduction, cell proliferation, and intracellular substance transfer. However, between licorice extract and Glycyrrhizin, it affects genes that are involved in signal transduction common to MCF-7 cells, which may be different from the response to estrogen.

(5)エストロゲン応答遺伝子による甘草抽出物のエストロゲン様応答評価(図5)
各試料(エストロゲン、甘草抽出物、及び、Glycyrrhizin)に対するエストロゲン応答遺伝子(上記、EstrArrayに搭載してあるもののうちの8個、TFF1、CDKN1A、RPS6KA3、NRIP1、CTSD、TP53I11、PRKCD、ARHGDIA)の転写反応の変動をリアルタイム定量RT-PCR法を用いて解析し、vehicleのみを添加した場合(Control)に対する相対的な発現変動値(Relative expression index)として示した。
(5) Estrogen-like response evaluation of licorice extract by estrogen response gene (Fig. 5)
Transcription of estrogen-responsive genes (eight of those mounted on EstrArray, TFF1, CDKN1A, RPS6KA3, NRIP1, CTSD, TP53I11, PRKCD, ARHGDIA) for each sample (estrogen, licorice extract and Glycyrrhizin) The fluctuation of the reaction was analyzed using a real-time quantitative RT-PCR method, and was expressed as a relative expression fluctuation value (Relative expression index) with respect to the case where only vehicle was added (Control).

リアルタイム定量RT-PCRは以下の方法で行った。
TFF1、CDKN1A、RPS6KA3、NRIP1、CTSD、TP53I11、PRKCD、ARHGDIA遺伝子はエストロゲ
ン及び植物性エストロゲンに応答することがこれまでの研究により分かっている(文献例
:Ise R., et al., FEBS Letters, 2005, Mar 14; 579(7): 1732-1740)。リアタイム定
量RT-PCRは、各処理したMCF-7細胞から抽出したRNAを用いて、Invitrogen社製Two-Step qRT-PCR kitを用いて行った。使ったプライマーを次に示す:TFF1, 5’-CACCATGGAGAACAAGGTGA-3’(配列番号1)、及び、5’-CTAGAACAGCACCTGGCACA-3’(配列番号2); CDKN1A, 5’-CCTTTCCCTTCAGTACCCTCTCA-3’(配列番号3)、及び、5’-ACTAGGGTGCCCTTCTTCTTGTG-3’(配列番号4); RPS6KA3, 5’-CAAAGGACCTGGTGTCAAAGATG-3’(配列番号5)、及び、5’-AGATGTGGTGCATCCTGTCTGTT-3’(配列番号6); NRIP1, 5’-TGCATTAGAACCATCTGGAGCA-3’(配列番号7)、及び、5’-CAGATGGAAGATTCCAGGTCCA-3’(配列番号8); CTSD, 5'-AGGCCATTGTGGACAAGGCA-3’(配列番号9)、及び、5'-CACGGTCAAACACAGTGTAGTAG-3
’(配列番号10); TP53I11, 5’-CACGGACAAAGGGACACACA-3’(配列番号11)、及び
、5’-GTACATGCCAAGGGGCAAGA-3’(配列番号12); PRKCD, 5’-GACCTCAAACTGGACAATGTGCT-3’(配列番号13)、及び、5’-ATCTCAGGGGCGATATAGTCAGG-3’(配列番号14); ARHGDIA, 5’-CCTCACTAGCCTCTACTCCCTGT-3’(配列番号15)、及び、5’-ACTGAGGTGACTTGAGTGTTGG-3’(配列番号16); β-Actin, 5’-CAAGAGATGGCCACGGCTGCT-3’(配列番号17)、及び、5’-TCCTTCTGCATCCTGTCGGCA-3’(配列番号18)。リアタイム定量RT-PCR反応はLightCycler (Roch社)を用いて行った。データの補正用にβ-Actinを用いた。Relative expression indexの計算は次のように行った。
Real-time quantitative RT-PCR was performed by the following method.
Previous studies have shown that TFF1, CDKN1A, RPS6KA3, NRIP1, CTSD, TP53I11, PRKCD, and ARHGDIA genes respond to estrogen and phytoestrogens (examples: Ise R., et al., FEBS Letters, 2005, Mar 14; 579 (7): 1732-1740). Real-time quantitative RT-PCR was performed using Invitrogen's Two-Step qRT-PCR kit using RNA extracted from each treated MCF-7 cell. The following primers were used: TFF1, 5'-CACCATGGAGAACAAGGTGA-3 '(SEQ ID NO: 1) and 5'-CTAGAACAGCACCTGGCACA-3' (SEQ ID NO: 2); CDKN1A, 5'-CCTTTCCCTTCAGTACCCTCTCA-3 '(SEQ ID NO: 1) 3) and 5′-ACTAGGGTGCCCTTCTTCTTGTG-3 ′ (SEQ ID NO: 4); RPS6KA3, 5′-CAAAGGACCTGGTGTCAAAGATG-3 ′ (SEQ ID NO: 5) and 5′-AGATGTGGTGCATCCTGTCTGTT-3 ′ (SEQ ID NO: 6); NRIP1, 5'-TGCATTAGAACCATCTGGAGCA-3 '(SEQ ID NO: 7) and 5'-CAGATGGAAGATTCCAGGTCCA-3' (SEQ ID NO: 8); CTSD, 5'-AGGCCATTGTGGACAAGGCA-3 '(SEQ ID NO: 9) and 5'-CACGGTCAAACACAGTGTAGTAG- Three
'(SEQ ID NO: 10); TP53I11, 5'-CACGGACAAAGGGACACACA-3' (SEQ ID NO: 11) and 5'-GTACATGCCAAGGGGCAAGA-3 '(SEQ ID NO: 12); PRKCD, 5'-GACCTCAAACTGGACAATGTGCT-3' (SEQ ID NO: 13) ) And 5′-ATCTCAGGGGCGATATAGTCAGG-3 ′ (SEQ ID NO: 14); ARHGDIA, 5′-CCTCACTAGCCTCTACTCCCTGT-3 ′ (SEQ ID NO: 15) and 5′-ACTGAGGTGACTTGAGTGTTGG-3 ′ (SEQ ID NO: 16); β-Actin 5′-CAAGAGATGGCCACGGCTGCT-3 ′ (SEQ ID NO: 17) and 5′-TCCTTCTGCATCCTGTCGGCA-3 ′ (SEQ ID NO: 18). Real-time quantitative RT-PCR reaction was performed using LightCycler (Roch). Β-Actin was used for data correction. Calculation of Relative expression index was performed as follows.

Relative expression index = 2-(DCt- DCt’)
ただし、各試料について、
ΔCt = CtGene-CtActin
Control として、
ΔCt’ = Ct’Gene-Ct’Actin
である(Ctは threshold cycleを示す)。
Relative expression index = 2- (DCt- DCt ') .
However, for each sample,
ΔCt = Ct Gene -Ct Actin ,
As Control
ΔCt '= Ct' Gene -Ct ' Actin
(Ct indicates threshold cycle).

それぞれ、Log2変換値を示した。エラーバーは3回の試験の偏差(SD)を示す。それぞれの値の信頼性(変動が無いと仮定した場合の危険率)を、「*」(p < 0.05)、あるい
は、「**」(p < 0.01)で示した。遺伝子名は、米国NIHのNCBI(National Center for Biotechnology Information)が運営するGenBankデータベースに登録されているUniGene名で示した。得られた結果は、いずれの遺伝子の場合も、甘草抽出物はエストロゲンと同様の変動(遺伝子発現の増加あるいは減少)を示したが、Glycyrrhizinは明確な変動は示さなかった。この結果により、DNAチップで得られた結果はリアルタイム定量RT-PCR法によ
っても再現されることが示された。
Each shows Log 2 conversion value. Error bars indicate the deviation (SD) of three tests. The reliability of each value (risk rate assuming no change) is indicated by "*" (p <0.05) or "**" (p <0.01). The gene name is indicated by the UniGene name registered in the GenBank database operated by NCBI (National Center for Biotechnology Information) of NIH, USA. The obtained results showed that the licorice extract showed the same fluctuation (increase or decrease in gene expression) as that of estrogen, but Glycyrrhizin did not show any clear fluctuation in any gene. From this result, it was shown that the results obtained with the DNA chip were also reproduced by the real-time quantitative RT-PCR method.

(6)シグナル伝達系タンパク質による甘草抽出物のエストロゲン様応答評価(図6)
シグナル伝達系のタンパク質であるErk1/2のリン酸化反応を指標にして、各試料(エストロゲン、甘草抽出物、及び、Glycyrrhizin)に対するMCF-7細胞の応答をリン酸化Erk1/2タンパク質(P-Erk1/2)、及び、全Erk1/2タンパク質(T-Erk1/2)に対する抗体を用い
たウェスタンブロッティングにより調べた。処理後の継時変化を調べたところ(図6A)、いずれも、処理後5〜30分後にリン酸化Erk1/2タンパク質(P-Erk1/2)の量が増加して
いた。ウエスタンブロッティングは以下の方法で行った。
(6) Evaluation of estrogen-like response of licorice extract by signal transduction protein (Fig. 6)
Using the phosphorylation of Erk1 / 2, a signal transduction protein, as an index, the response of MCF-7 cells to each sample (estrogens, licorice extract, and Glycyrrhizin) was phosphorylated Erk1 / 2 protein (P-Erk1 / 2) and Western blotting using antibodies against the total Erk1 / 2 protein (T-Erk1 / 2). When the change in the passage after treatment was examined (FIG. 6A), the amount of phosphorylated Erk1 / 2 protein (P-Erk1 / 2) was increased 5 to 30 minutes after treatment. Western blotting was performed by the following method.

MCF-7細胞をPhenol red free PRMI1640培地(10% DCC-FBS含む)に48時間培養した後、FBSを含まないPRMI1640培地を用いて更に36時間培養した。その後、各試料を添加した後、Erk1/2タンパク質リン酸化の継時変化を解析した。SDSサンプルバッファーを用いて抽出したタンパク質試料各30μgを、12.5%ゲルを用いてSDS-PAGEを行い、ウエスタンブロット
解析を行った。ウエスタンブロット解析は一次抗体にウサギ抗リン酸化Erk1/2と抗Total-Erk1/2抗体を用い、二次抗体には抗ウサギIg抗体ホースディッラシュペルオシダーゼ複合体を用い、検出はECL plus Western Blotting Detection System(アムシャム社)を用いて化学発光検出器Cool Saver AE-6955(アトー社)にて行った。
MCF-7 cells were cultured in Phenol red free PRMI1640 medium (containing 10% DCC-FBS) for 48 hours, and then further cultured in PRMI1640 medium not containing FBS for 36 hours. Then, after adding each sample, the change over time of Erk1 / 2 protein phosphorylation was analyzed. 30 μg of each protein sample extracted using SDS sample buffer was subjected to SDS-PAGE using 12.5% gel and subjected to Western blot analysis. Western blot analysis uses rabbit anti-phosphorylated Erk1 / 2 and anti-Total-Erk1 / 2 antibodies as the primary antibody, anti-rabbit Ig antibody horse dysperperosidase complex as the secondary antibody, and ECL plus Western detection A chemiluminescence detector Cool Saver AE-6955 (Ato) was used with a Blotting Detection System (Amsham).

エストロゲンに対するアンタゴニストの影響を調べたところ(図6B)、タモキシフェン(OHT)に対してはいずれもリン酸化が抑制されたが、ICI 182,780(ICI)に対しては
、甘草抽出物は抑制を示したが、Glycyrrhizin処理の場合は抑制の度合いは低かった。このことから、シグナル伝達のメカニズムについても甘草抽出物とGlycyrrhizinの間で相違があると考えられる。Glycyrrhizinも甘草抽出物と同様にErk1/2タンパク質のリン酸化反応を促進することから、両者に共通するシグナル伝達系が考えられる。このことは、DNA
チップの解析結果で得られた甘草抽出物とGlycyrrhizinの間の遺伝子発現プロファイルの相同性を良く説明するものである。また、Erk1/2タンパク質は様々な受容体応答や転写因子の活性化・不活性化に関与しており、Erk1/2タンパク質のリン酸化反応が高まったことはDNAチップ解析で得られたシグナル応答遺伝子の変動を示す結果についても良く説明す
る。
When the influence of antagonists on estrogen was examined (FIG. 6B), phosphorylation was suppressed for tamoxifen (OHT), but licorice extract showed inhibition for ICI 182,780 (ICI). However, in the case of Glycyrrhizin treatment, the degree of suppression was low. This suggests that there is a difference between the licorice extract and Glycyrrhizin in terms of the signal transduction mechanism. Since Glycyrrhizin promotes the phosphorylation of Erk1 / 2 protein like licorice extract, a signal transduction system common to both can be considered. This is DNA
It explains well the homology of gene expression profile between licorice extract and Glycyrrhizin obtained by analysis result of chip. In addition, Erk1 / 2 protein is involved in various receptor responses and activation / inactivation of transcription factors. The increase in phosphorylation of Erk1 / 2 protein is a signal response obtained by DNA chip analysis. The results showing gene variation are also well explained.

(7)PC12神経樹状突起形成能による甘草抽出物のエストロゲン様応答評価(図7)
ラット副腎髄質由来のPC12細胞は、神経成長因子NGFの刺激により樹状突起形成を示す
が、低濃度のNGFの存在化で、エストロゲン受容体が存在する場合にエストロゲン刺激に
対しても樹状突起の形成を示す。これは、エストロゲン受容体の発現が見られなく、エストロゲン応答シグナル伝達系が機能していないと考えられるPC12細胞でも、他のシグナル伝達系カスケードを通してエストロゲン受容体(ER)依存のシグナル伝達が行われることを示す。この細胞に対して、NGF存在下、各試料(エストロゲン(E2:17β-エストラジオ
ール)、甘草抽出物、及び、Glycyrrhizin)添加後の樹状突起形成能を調べたところ、エストロゲン、及び、甘草抽出物の存在下では、エストロゲン受容体依存の樹状突起形成が見られたが、Glycyrrhizinの場合は、樹状突起形成は見られなかった。結果を図7に示す。図7Aは未処理細胞、図7BはNGF及びE2添加、図7CはER及びNGF添加、図7DはER、NGF
及びE2添加、図7EはER、NGF及び甘草抽出物添加、図7FはER、NGF及びGlycyrrhizin添加の結果を示す。この結果、甘草抽出物はエストロゲンと同様の樹状突起形成能を持つが(図7Dおよび図7E)、Glycyrrhizinにはその活性はない(図7F)ことがわかる。
(7) Evaluation of estrogen-like response of licorice extract by PC12 neural dendrite formation ability (Fig. 7)
PC12 cells derived from rat adrenal medulla show dendritic formation upon stimulation with nerve growth factor NGF, but in the presence of low levels of NGF, dendrites can also be induced against estrogen stimulation in the presence of estrogen receptor. Shows the formation of. This is because estrogen receptor (ER) -dependent signal transduction occurs through other signal transduction cascades even in PC12 cells where estrogen receptor expression is not observed and estrogen-responsive signal transduction is thought to be nonfunctional It shows that. The cells were examined for their ability to form dendrites after the addition of each sample (estrogen (E 2 : 17β-estradiol), licorice extract, and Glycyrrhizin) in the presence of NGF, and estrogen and licorice extraction were performed. In the presence of the substance, estrogen receptor-dependent dendrite formation was observed, but in the case of Glycyrrhizin, dendrite formation was not observed. The results are shown in FIG. 7A is untreated cells, FIG. 7B is added 2 NGF and E, Fig. 7C ER and NGF added, Figure 7D ER, NGF
And E 2 addition, Figure 7E shows ER, NGF and licorice extract added, FIG. 7F ER, the results of NGF and Glycyrrhizin added. As a result, licorice extract has dendritic ability similar to estrogen (FIGS. 7D and 7E), but Glycyrrhizin has no activity (FIG. 7F).

エストロゲン様活性を評価するために用いられる遺伝子一覧を示す図である。It is a figure which shows the gene list used in order to evaluate an estrogen-like activity. DNAチップ条件検討のための細胞増殖試験の結果を示す図である。It is a figure which shows the result of the cell proliferation test for DNA chip condition examination. 甘草抽出物、及び、GlycyrrhizinのDNAチップ解析の結果を示す図である。It is a figure which shows the result of a DNA chip analysis of a licorice extract and Glycyrrhizin. 遺伝子機能を利用したDNAチップ解析結果の評価を示す図である。It is a figure which shows the evaluation of the DNA chip analysis result using a gene function. エストロゲン応答遺伝子による甘草抽出物のエストロゲン様応答評価の結果を示す図である。It is a figure which shows the result of the estrogen-like response evaluation of a licorice extract by an estrogen response gene. シグナル伝達系タンパク質による甘草抽出物のエストロゲン様応答評価の結果を示す図である。It is a figure which shows the result of the estrogen-like response evaluation of a licorice extract by a signal transduction system protein. PC12神経樹状突起形成能による甘草抽出物のエストロゲン様応答評価の結果を示す図である。It is a figure which shows the result of the estrogen-like response evaluation of a licorice extract by PC12 neural dendrite formation ability.

Claims (14)

エストロゲン様活性を有する漢方薬(漢方生薬を含む)の活性成分の有効活性を評価する方法であって、
当該方法が、評価の際に用いるエストロゲン応答遺伝子を、以下1.〜115.に示す115個のエストロゲン応答遺伝子から選択して複数の機能別グループにグループ分けし、被検対象それぞれに機能別グループごとに少なくとも10個以上のエストロゲン応答遺伝子の発現プロファイルを作成し、被検対象間での機能別グループごとの相同性の統計的有意性を判定することで、エストロゲン活性を評価する方法であり、
前記漢方薬を生体に適用した場合に得られる機能別グループごとのエストロゲン応答遺伝子の発現プロファイルと、エストロゲンを生体に適用した場合に得られる機能別グループごとのエストロゲン応答遺伝子の発現プロファイルとを、機能別グループごとに比較して両者間の相同性の統計的有意性を判定する工程、及び
前記評価しようとする漢方薬の活性成分を生体に適用した場合に得られる機能別グループごとのエストロゲン応答遺伝子の発現プロファイルと前記漢方薬における前記機能別グループごとのエストロゲン応答遺伝子の発現プロファイルとを、機能別グループごとに比較して両者間の相同性の統計的有意性を判定する工程を含むことを特徴とする、前記方法
1.phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2)[NM_004563]
2.phosphoserine aminotransferase 1 (PSAT1)[NM_058179]
3.asparagine synthetase (ASNS)[NM_133436]
4.phosphoglycerate dehydrogenase (PHGDH)[NM_006623]
5.serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2)[NM_005412]
6.24-dehydrocholesterol reductase (DHCR24)[NM_014762]
7.tryptophanyl-tRNA synthetase (WARS) [NM_004184]
8.fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (FUT8) [NM_178155]
9.argininosuccinate synthetase (ASS) [NM_054012]
10.enolase 2 (gamma, neuronal) (ENO2) [NM_001975]
11.enolase 3 (beta, muscle) (ENO3) [NM_001976]
12.fructose-1,6-bisphosphatase 1 (FBP1) [NM_000507]
13.methylenetetrahydrofolate dehydrogenase (NADP+dependent) 2, methenyl tetrahydrofolate cyclohydrolase (MTHFD2) [NM_006636]
14.carnitine palmitoyltransferase 1A (liver) (CPT1A) [NM_001876]
15.peptidase (mitochondrial processing) alpha (PMPCA) [NM_015160]
16.cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
17.glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (GOT1) [NM_002079]
18.sorbitol dehydrogenase (SORD) [NM_003104]
19.stearoyl-CoA desaturase (delta-9-desaturase) (SCD) [NM_005063]
20.surfactant, pulmonary-associated protein B (SFTPB) [NM_000542]
21.serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 (SERPINA3) [NM_001085]
22.aconitase 2, mitochondrial (ACO2) [NM_001098]
23.glutamine-fructose-6-phosphate transaminase 1 (GFPT1) [NM_002056]
24.CDP-diacylglycerol-inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (CDIPT) [NM_006319]
25.ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586 ]
26.protein kinase C, delta (PRKCD) [NM_006254] 27.unc-51-like kinase 1 (C.elegans) (ULK1) [NM_003565]
28.integrin-linked kinase (ILK) [NM_004517]29.protein kinase C substrate 80K-H (PRKCSH) [NM_002743]
30.cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
31.phosphoinositide-3-kinase, class 3 (PIK3C3) [NM_002647]
32.poliovirus receptor (PVR) [NM_006505]
33.progesterone receptor (PGR) [NM_000926]
34.insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]
35.catenin (cadherin-associated protein), delta 2 (neural
plakophilin-related arm-repeat protein) (CTNND2) [NM_001332]
36.neuropeptide Y receptor Y1 (NPY1R) [NM_000909]
37.protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18) [NM_014369]
38.Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
39.endothelin 2 (EDN2) [NM_001956]
40.stanniocalcin 2 (STC2) [NM_003714]
41.lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP) [NM_005567]
42.angiotensin II receptor, type 1 (AGTR1) [NM_000685]
43.proprotein convertase subtilisin/kexin type 6 (PCSK6) [NM_002570]
44.SH3-domain binding protein 5 (BTK-associated) (SH3BP5) [NM_004844]
45.growth differentiation factor 15 (GDF15) [NM_004864]
46.ras homolog gene family, member C (RHOC) [NM_175744]
47.estrogen receptor 1 (ESR1) [NM_000125]
48.trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
49.aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2) [NM_014862]
50.v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) (ERBB2) [NM_004448]
51.tribbles homolog 3 (Drosophila) (TRIB3) [NM_021158]
52.tyrosyl-tRNA synthetase (YARS) [NM_003680]
53.quiescin Q6 (QSCN6) [NM_002826]
54.cyclin A1 (CCNA1) [NM_003914]
55.interferon-related developmental regulator 1 (IFRD1) [NM_001550]
56.matrix Gla protein (MGP) [NM_000900]
57.amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]
58.insulin-like growth factor binding protein 4 (IGFBP4) [NM_001552]
59.Kruppel-like factor 10 (KLF10) [NM_005655]
60.calpain, small subunit 1 (CAPNS1) [NM_001749]
61.interferon stimulated exonuclease gene 20kDa (ISG20) [NM_002201]
62.tumor-associated calcium signal transducer 2 (TACSTD2) [NM_002353]
63.PDZ domain containing 1 (PDZK1) [NM_002614]
64.ferritin, heavy polypeptide 1 (FTH1) [NM_002032]
65.peripheral myelin protein 22 (PMP22) [NM_000304]
66.lysosomal-associated membrane protein 3 (LAMP3) [NM_014398]
67.tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
68.tetraspanin 1 (TSPAN1) [NM_005727]
69.CCAAT/enhancer binding protein (C/EBP), beta (CEBPB) [NM_005194]
70.activating transcription factor 3 (ATF3) [NM_001674]
71.enolase 1, (alpha) (ENO1) [NM_001428]
72.activating transcription factor 3 (ATF3) [NM_004024]
73.early growth response 3 (EGR3) [NM_004430]
74.runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) (RUNX1) [NM_001001890]
75.v-fos FBJ murine osteosarcoma viral oncogene homolog (FOS) [NM_005252]
76.nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
77.transcription elongation factor A (SII), 1 (TCEA1) [NM_006756]
78.general transcription factor II, i (GTF2I) [NM_032999]
79.TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa (TAF9) [NM_003187]
80.EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) [NM_004105]
81.reticulocalbin 1, EF-hand calcium binding domain (RCN1) [NM_002901]
82.cadherin 18, type 2 (CDH18) [NM_004934]
83.S100 calcium binding protein P (S100P) [NM_005980]
84.chromosome 1 open reading frame 19 (C1orf19) [NM_052965]
85.IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (IMP4) [NM_033416]
86.elongation factor Tu GTP binding domain containing 2 (EFTUD2)(U5-116KD) [NM_004247]
87.glycyl-tRNA synthetase (GARS) [NM_002047]
88.eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa (EIF3S9) [NM_003751]
89.solute carrier family 12 (sodium/potassium/chloride transporters), member 2 (SLC12A2) [NM_001046]
90.solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 (SLC7A5) [NM_003486]
91.solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (SLC1A4) [NM_003038]
92.solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 (SLC7A11) [NM_014331]
93.lipocalin 2 (oncogene 24p3) (LCN2) [NM_005564]
94.exportin, tRNA (nuclear export receptor for tRNAs) (XPOT) [NM_007235]
95.solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5) [NM_005628]
96.chloride intracellular channel 4 (CLIC4) [NM_013943]
97.transcobalamin I (vitamin B12 binding protein, R binder family) (TCN1) [NM_0
01062]
98.synaptogyrin 2 (SYNGR2) [NM_004710]
99.transmembrane 4 L six family member 1 (TM4SF1) [NM_014220]
100.heat shock 70kDa protein 1A (HSPA1A) [NM_005345]
101.heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5) [NM_005347]
102.heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1) (TRA1)[ NM_003299]
103.chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1) [NM_006807]
104.H3 histone, family 3B (H3.3B) (H3F3B) [NM_005324]
105.retinoblastoma binding protein 8 (RBBP8) [NM_002894]
106.tumor protein D52-like 1 (TPD52L1) [NM_003287]
107.absent in melanoma 1 (AIM1) [NM_001624]
108.chromosome 19 open reading frame 21 (C19orf21) [NM_173481]
109.SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341]
110.selenium binding protein 1 (SELENBP1) [NM_003944]
111.KIAA0196 (KIAA0196) [NM_014846]
112.LOC401397 [BC065765]
113.phorbol-12-myristate-13-acetate-induced protein 1 (PMAIP1) [NM_021127]
114.PREDICTED: paternally expressed 10 (PEG10) [XM_496907]
115.DAZ associated protein 2 (DAZAP2) [NM_014764]。
A method for evaluating the effective activity of an active ingredient of Chinese herbal medicine (including herbal medicine) having estrogenic activity,
In this method, the estrogen responsive genes used in the evaluation are selected from 115 estrogen responsive genes shown in 1. to 115 below and grouped into a plurality of functional groups. It is a method for evaluating estrogen activity by creating an expression profile of at least 10 estrogen responsive genes for each and determining the statistical significance of homology for each functional group between test subjects,
Expression profiles of estrogen-responsive genes for each functional group obtained when the above-mentioned Kampo medicine is applied to the living body and estrogen-responsive gene expression profiles for each functional group obtained when the estrogen is applied to the living body. The step of judging the statistical significance of homology between the two compared to each group, and the expression of the estrogen response gene for each functional group obtained when the active ingredient of the Chinese medicine to be evaluated is applied to the living body Comparing the profile and the expression profile of the estrogen response gene for each functional group in the herbal medicine for each functional group to determine the statistical significance of homology between the two, Said method ;
1. phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2) [NM_004563]
2. phosphoserine aminotransferase 1 (PSAT1) [NM_058179]
3. asparagine synthetase (ASNS) [NM_133436]
Four. phosphoglycerate dehydrogenase (PHGDH) [NM_006623]
Five. serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2) [NM_005412]
6. 24-dehydrocholesterol reductase (DHCR24) [NM_014762]
7. tryptophanyl-tRNA synthetase (WARS) [NM_004184]
8. fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (FUT8) [NM_178155]
9. argininosuccinate synthetase (ASS) [NM_054012]
Ten. enolase 2 (gamma, neuronal) (ENO2) [NM_001975]
11. enolase 3 (beta, muscle) (ENO3) [NM_001976]
12. fructose-1,6-bisphosphatase 1 (FBP1) [NM_000507]
13. methylenetetrahydrofolate dehydrogenase (NADP + dependent) 2, methenyl tetrahydrofolate cyclohydrolase (MTHFD2) [NM_006636]
14. carnitine palmitoyltransferase 1A (liver) (CPT1A) [NM_001876]
15. peptidase (mitochondrial processing) alpha (PMPCA) [NM_015160]
16. cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
17. glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (GOT1) [NM_002079]
18. sorbitol dehydrogenase (SORD) [NM_003104]
19. stearoyl-CoA desaturase (delta-9-desaturase) (SCD) [NM_005063]
20. surfactant, pulmonary-associated protein B (SFTPB) [NM_000542]
twenty one. serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 (SERPINA3) [NM_001085]
twenty two. aconitase 2, mitochondrial (ACO2) [NM_001098]
twenty three. glutamine-fructose-6-phosphate transaminase 1 (GFPT1) [NM_002056]
twenty four. CDP-diacylglycerol-inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (CDIPT) [NM_006319]
twenty five. ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586]
26. protein kinase C, delta (PRKCD) [NM_006254] 27. unc-51-like kinase 1 (C. elegans) (ULK1) [NM_003565]
28. integrin-linked kinase (ILK) [NM_004517] 29. protein kinase C substrate 80K-H (PRKCSH) [NM_002743]
30. cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
31. phosphoinositide-3-kinase, class 3 (PIK3C3) [NM_002647]
32. poliovirus receptor (PVR) [NM_006505]
33. progesterone receptor (PGR) [NM_000926]
34. insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]
35. catenin (cadherin-associated protein), delta 2 (neural
plakophilin-related arm-repeat protein) (CTNND2) [NM_001332]
36. neuropeptide Y receptor Y1 (NPY1R) [NM_000909]
37. protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18) [NM_014369]
38. Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
39. endothelin 2 (EDN2) [NM_001956]
40. stanniocalcin 2 (STC2) [NM_003714]
41. lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP) [NM_005567]
42. angiotensin II receptor, type 1 (AGTR1) [NM_000685]
43. proprotein convertase subtilisin / kexin type 6 (PCSK6) [NM_002570]
44. SH3-domain binding protein 5 (BTK-associated) (SH3BP5) [NM_004844]
45. growth differentiation factor 15 (GDF15) [NM_004864]
46. ras homolog gene family, member C (RHOC) [NM_175744]
47. estrogen receptor 1 (ESR1) [NM_000125]
48. trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
49. aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2) [NM_014862]
50. v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro / glioblastoma derived oncogene homolog (avian) (ERBB2) [NM_004448]
51. tribbles homolog 3 (Drosophila) (TRIB3) [NM_021158]
52. tyrosyl-tRNA synthetase (YARS) [NM_003680]
53. quiescin Q6 (QSCN6) [NM_002826]
54. cyclin A1 (CCNA1) [NM_003914]
55. interferon-related developmental regulator 1 (IFRD1) [NM_001550]
56. matrix Gla protein (MGP) [NM_000900]
57. amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]
58. insulin-like growth factor binding protein 4 (IGFBP4) [NM_001552]
59. Kruppel-like factor 10 (KLF10) [NM_005655]
60. calpain, small subunit 1 (CAPNS1) [NM_001749]
61. interferon stimulated exonuclease gene 20kDa (ISG20) [NM_002201]
62. tumor-associated calcium signal transducer 2 (TACSTD2) [NM_002353]
63. PDZ domain containing 1 (PDZK1) [NM_002614]
64. ferritin, heavy polypeptide 1 (FTH1) [NM_002032]
65. peripheral myelin protein 22 (PMP22) [NM_000304]
66. lysosomal-associated membrane protein 3 (LAMP3) [NM_014398]
67. tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
68. tetraspanin 1 (TSPAN1) [NM_005727]
69. CCAAT / enhancer binding protein (C / EBP), beta (CEBPB) [NM_005194]
70. activating transcription factor 3 (ATF3) [NM_001674]
71. enolase 1, (alpha) (ENO1) [NM_001428]
72. activating transcription factor 3 (ATF3) [NM_004024]
73. early growth response 3 (EGR3) [NM_004430]
74. runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) (RUNX1) [NM_001001890]
75. v-fos FBJ murine osteosarcoma viral oncogene homolog (FOS) [NM_005252]
76. nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
77. transcription elongation factor A (SII), 1 (TCEA1) [NM_006756]
78. general transcription factor II, i (GTF2I) [NM_032999]
79. TAF9 RNA polymerase II, TATA box binding protein (TBP) -associated factor, 32kDa (TAF9) [NM_003187]
80. EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) [NM_004105]
81. reticulocalbin 1, EF-hand calcium binding domain (RCN1) [NM_002901]
82. cadherin 18, type 2 (CDH18) [NM_004934]
83. S100 calcium binding protein P (S100P) [NM_005980]
84. chromosome 1 open reading frame 19 (C1orf19) [NM_052965]
85. IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (IMP4) [NM_033416]
86. elongation factor Tu GTP binding domain containing 2 (EFTUD2) (U5-116KD) [NM_004247]
87. glycyl-tRNA synthetase (GARS) [NM_002047]
88. eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa (EIF3S9) [NM_003751]
89. solute carrier family 12 (sodium / potassium / chloride transporters), member 2 (SLC12A2) [NM_001046]
90. solute carrier family 7 (cationic amino acid transporter, y + system), member 5 (SLC7A5) [NM_003486]
91. solute carrier family 1 (glutamate / neutral amino acid transporter), member 4 (SLC1A4) [NM_003038]
92. solute carrier family 7, (cationic amino acid transporter, y + system) member 11 (SLC7A11) [NM_014331]
93. lipocalin 2 (oncogene 24p3) (LCN2) [NM_005564]
94. exportin, tRNA (nuclear export receptor for tRNAs) (XPOT) [NM_007235]
95. solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5) [NM_005628]
96. chloride intracellular channel 4 (CLIC4) [NM_013943]
97. transcobalamin I (vitamin B12 binding protein, R binder family) (TCN1) (NM_0
01062]
98. synaptogyrin 2 (SYNGR2) [NM_004710]
99. transmembrane 4 L six family member 1 (TM4SF1) [NM_014220]
100. heat shock 70kDa protein 1A (HSPA1A) [NM_005345]
101. heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5) [NM_005347]
102. heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1) (TRA1) [NM_003299]
103. chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1) [NM_006807]
104. H3 histone, family 3B (H3.3B) (H3F3B) [NM_005324]
105. retinoblastoma binding protein 8 (RBBP8) [NM_002894]
106. tumor protein D52-like 1 (TPD52L1) [NM_003287]
107. absent in melanoma 1 (AIM1) [NM_001624]
108. chromosome 19 open reading frame 21 (C19orf21) [NM_173481]
109. SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341]
110. selenium binding protein 1 (SELENBP1) [NM_003944]
111. KIAA0196 (KIAA0196) [NM_014846]
112. LOC401397 [BC065765]
113. phorbol-12-myristate-13-acetate-induced protein 1 (PMAIP1) [NM_021127]
114. PREDICTED: paternally expressed 10 (PEG10) [XM_496907]
115. DAZ associated protein 2 (DAZAP2) [NM_014764].
さらに、前記漢方薬の活性成分における前記エストロゲン応答遺伝子の機能別グループごとの発現プロファイルと前記エストロゲンによる前記エストロゲン応答遺伝子の機能別グループごとの発現プロファイルとを、機能別グループごとに比較して両者間の相同性の統計的有意性を判定する工程を設けることを特徴とする、請求項1に記載の方法。   Furthermore, the expression profile for each functional group of the estrogen response gene in the active ingredient of the Chinese herbal medicine and the expression profile for each functional group of the estrogen response gene by the estrogen are compared for each functional group. The method of claim 1, comprising the step of determining the statistical significance of homology. 前記機能別グループが、「enzyme」グループ、「signaling」グループ、「proliferation」グループ、「transcription」グループ、「transport」グループ及び「others」グループから選択されることを特徴とする、請求項1又は2に記載の方法。   The function-specific group is selected from an "enzyme" group, a "signaling" group, a "proliferation" group, a "transcription" group, a "transport" group, and an "others" group. The method described in 1. 前記エストロゲン応答遺伝子が、以下1.〜115.に示す115個のエストロゲン応答遺伝子のうち、前記機能別グループの「enzyme」グループ(1.〜24.)、「signaling」グループ(25.〜50.)「proliferation」グループ(51.〜68.)「transcription」グループ(69.〜79.)「transport」グループ(80.〜97.)「others」グループ(98.〜115.)のいずれかのグループから、少なくとも10個の遺伝子が選択されていることを特徴とする、請求項3に記載の方法;
1.phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2)[NM_004563]
2.phosphoserine aminotransferase 1 (PSAT1)[NM_058179]
3.asparagine synthetase (ASNS)[NM_133436]
4.phosphoglycerate dehydrogenase (PHGDH)[NM_006623]
5.serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2)[NM_005412]
6.24-dehydrocholesterol reductase (DHCR24)[NM_014762]
7.tryptophanyl-tRNA synthetase (WARS) [NM_004184]
8.fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (FUT8) [NM_178155]
9.argininosuccinate synthetase (ASS) [NM_054012]
10.enolase 2 (gamma, neuronal) (ENO2) [NM_001975]
11.enolase 3 (beta, muscle) (ENO3) [NM_001976]
12.fructose-1,6-bisphosphatase 1 (FBP1) [NM_000507]
13.methylenetetrahydrofolate dehydrogenase (NADP+dependent) 2, methenyl tetrahydrofolate cyclohydrolase (MTHFD2) [NM_006636]
14.carnitine palmitoyltransferase 1A (liver) (CPT1A) [NM_001876]
15.peptidase (mitochondrial processing) alpha (PMPCA) [NM_015160]
16.cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
17.glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (GOT1) [NM_002079]
18.sorbitol dehydrogenase (SORD) [NM_003104]
19.stearoyl-CoA desaturase (delta-9-desaturase) (SCD) [NM_005063]
20.surfactant, pulmonary-associated protein B (SFTPB) [NM_000542]
21.serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 (SERPINA3) [NM_001085]
22.aconitase 2, mitochondrial (ACO2) [NM_001098]
23.glutamine-fructose-6-phosphate transaminase 1 (GFPT1) [NM_002056]
24.CDP-diacylglycerol-inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (CDIPT) [NM_006319]
25.ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586 ]
26.protein kinase C, delta (PRKCD) [NM_006254]
27.unc-51-like kinase 1 (C.elegans) (ULK1) [NM_003565]
28.integrin-linked kinase (ILK) [NM_004517]
29.protein kinase C substrate 80K-H (PRKCSH) [NM_002743]
30.cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
31.phosphoinositide-3-kinase, class 3 (PIK3C3) [NM_002647]
32.poliovirus receptor (PVR) [NM_006505]
33.progesterone receptor (PGR) [NM_000926]
34.insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]
35.catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) (CTNND2) [NM_001332]
36.neuropeptide Y receptor Y1 (NPY1R) [NM_000909]
37.protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18) [NM_014369]
38.Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
39.endothelin 2 (EDN2) [NM_001956]
40.stanniocalcin 2 (STC2) [NM_003714]
41.lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP) [NM_005567]
42.angiotensin II receptor, type 1 (AGTR1) [NM_000685]
43.proprotein convertase subtilisin/kexin type 6 (PCSK6) [NM_002570]
44.SH3-domain binding protein 5 (BTK-associated) (SH3BP5) [NM_004844]
45.growth differentiation factor 15 (GDF15) [NM_004864]
46.ras homolog gene family, member C (RHOC) [NM_175744]
47.estrogen receptor 1 (ESR1) [NM_000125]
48.trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
49.aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2) [NM_014862]
50.v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) (ERBB2) [NM_004448]
51.tribbles homolog 3 (Drosophila) (TRIB3) [NM_021158]
52.tyrosyl-tRNA synthetase (YARS) [NM_003680]
53.quiescin Q6 (QSCN6) [NM_002826]
54.cyclin A1 (CCNA1) [NM_003914]
55.interferon-related developmental regulator 1 (IFRD1) [NM_001550]
56.matrix Gla protein (MGP) [NM_000900]
57.amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]
58.insulin-like growth factor binding protein 4 (IGFBP4) [NM_001552]
59.Kruppel-like factor 10 (KLF10) [NM_005655]
60.calpain, small subunit 1 (CAPNS1) [NM_001749]
61.interferon stimulated exonuclease gene 20kDa (ISG20) [NM_002201]
62.tumor-associated calcium signal transducer 2 (TACSTD2) [NM_002353]
63.PDZ domain containing 1 (PDZK1) [NM_002614]
64.ferritin, heavy polypeptide 1 (FTH1) [NM_002032]
65.peripheral myelin protein 22 (PMP22) [NM_000304]
66.lysosomal-associated membrane protein 3 (LAMP3) [NM_014398]
67.tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
68.tetraspanin 1 (TSPAN1) [NM_005727]
69.CCAAT/enhancer binding protein (C/EBP), beta (CEBPB) [NM_005194]
70.activating transcription factor 3 (ATF3) [NM_001674]
71.enolase 1, (alpha) (ENO1) [NM_001428]
72.activating transcription factor 3 (ATF3) [NM_004024]
73.early growth response 3 (EGR3) [NM_004430]
74.runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) (RUNX1) [NM_001001890]
75.v-fos FBJ murine osteosarcoma viral oncogene homolog (FOS) [NM_005252]
76.nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
77.transcription elongation factor A (SII), 1 (TCEA1) [NM_006756]
78.general transcription factor II, i (GTF2I) [NM_032999]
79.TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa (TAF9) [NM_003187]
80.EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) [NM_004105]
81.reticulocalbin 1, EF-hand calcium binding domain (RCN1) [NM_002901]
82.cadherin 18, type 2 (CDH18) [NM_004934]
83.S100 calcium binding protein P (S100P) [NM_005980]
84.chromosome 1 open reading frame 19 (C1orf19) [NM_052965]
85.IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (IMP4) [NM_033416]
86.elongation factor Tu GTP binding domain containing 2 (EFTUD2)(U5-116KD) [NM_004247]
87.glycyl-tRNA synthetase (GARS) [NM_002047]
88.eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa (EIF3S9) [NM_003751]
89.solute carrier family 12 (sodium/potassium/chloride transporters), member 2 (SLC12A2) [NM_001046]
90.solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 (SLC7A5) [NM_003486]
91.solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (SLC1A4) [NM_003038]
92.solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 (SLC7A11) [NM_014331]
93.lipocalin 2 (oncogene 24p3) (LCN2) [NM_005564]
94.exportin, tRNA (nuclear export receptor for tRNAs) (XPOT) [NM_007235]
95.solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5) [NM_005628]
96.chloride intracellular channel 4 (CLIC4) [NM_013943]
97.transcobalamin I (vitamin B12 binding protein, R binder family) (TCN1) [NM_0
01062]
98.synaptogyrin 2 (SYNGR2) [NM_004710]
99.transmembrane 4 L six family member 1 (TM4SF1) [NM_014220]
100.heat shock 70kDa protein 1A (HSPA1A) [NM_005345]
101.heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5) [NM_005347]
102.heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1) (TRA1)[ NM_003299]
103.chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1) [NM_006807]
104.H3 histone, family 3B (H3.3B) (H3F3B) [NM_005324]
105.retinoblastoma binding protein 8 (RBBP8) [NM_002894]
106.tumor protein D52-like 1 (TPD52L1) [NM_003287]
107.absent in melanoma 1 (AIM1) [NM_001624]
108.chromosome 19 open reading frame 21 (C19orf21) [NM_173481]
109.SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341]
110.selenium binding protein 1 (SELENBP1) [NM_003944]
111.KIAA0196 (KIAA0196) [NM_014846]
112.LOC401397 [BC065765]
113.phorbol-12-myristate-13-acetate-induced protein 1 (PMAIP1) [NM_021127]
114.PREDICTED: paternally expressed 10 (PEG10) [XM_496907]
115.DAZ associated protein 2 (DAZAP2) [NM_014764]。
Among the 115 estrogen responsive genes shown in 1. to 115. below, the functional group “enzyme” group (1 to 24.), “signaling” group (25. to 50. ) "Proliferation" group (51.-68.) "Transcription" group (69.-79.) "Transport" group (80.-97.) "Others" group (98.-115.) 4. The method of claim 3, wherein at least 10 genes are selected from
1. phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2) [NM_004563]
2. phosphoserine aminotransferase 1 (PSAT1) [NM_058179]
3. asparagine synthetase (ASNS) [NM_133436]
Four. phosphoglycerate dehydrogenase (PHGDH) [NM_006623]
Five. serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2) [NM_005412]
6. 24-dehydrocholesterol reductase (DHCR24) [NM_014762]
7. tryptophanyl-tRNA synthetase (WARS) [NM_004184]
8. fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (FUT8) [NM_178155]
9. argininosuccinate synthetase (ASS) [NM_054012]
Ten. enolase 2 (gamma, neuronal) (ENO2) [NM_001975]
11. enolase 3 (beta, muscle) (ENO3) [NM_001976]
12. fructose-1,6-bisphosphatase 1 (FBP1) [NM_000507]
13. methylenetetrahydrofolate dehydrogenase (NADP + dependent) 2, methenyl tetrahydrofolate cyclohydrolase (MTHFD2) [NM_006636]
14. carnitine palmitoyltransferase 1A (liver) (CPT1A) [NM_001876]
15. peptidase (mitochondrial processing) alpha (PMPCA) [NM_015160]
16. cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
17. glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (GOT1) [NM_002079]
18. sorbitol dehydrogenase (SORD) [NM_003104]
19. stearoyl-CoA desaturase (delta-9-desaturase) (SCD) [NM_005063]
20. surfactant, pulmonary-associated protein B (SFTPB) [NM_000542]
twenty one. serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 (SERPINA3) [NM_001085]
twenty two. aconitase 2, mitochondrial (ACO2) [NM_001098]
twenty three. glutamine-fructose-6-phosphate transaminase 1 (GFPT1) [NM_002056]
twenty four. CDP-diacylglycerol-inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (CDIPT) [NM_006319]
twenty five. ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586]
26. protein kinase C, delta (PRKCD) [NM_006254]
27. unc-51-like kinase 1 (C. elegans) (ULK1) [NM_003565]
28. integrin-linked kinase (ILK) [NM_004517]
29. protein kinase C substrate 80K-H (PRKCSH) [NM_002743]
30. cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
31. phosphoinositide-3-kinase, class 3 (PIK3C3) [NM_002647]
32. poliovirus receptor (PVR) [NM_006505]
33. progesterone receptor (PGR) [NM_000926]
34. insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]
35. catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) (CTNND2) [NM_001332]
36. neuropeptide Y receptor Y1 (NPY1R) [NM_000909]
37. protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18) [NM_014369]
38. Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
39. endothelin 2 (EDN2) [NM_001956]
40. stanniocalcin 2 (STC2) [NM_003714]
41. lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP) [NM_005567]
42. angiotensin II receptor, type 1 (AGTR1) [NM_000685]
43. proprotein convertase subtilisin / kexin type 6 (PCSK6) [NM_002570]
44. SH3-domain binding protein 5 (BTK-associated) (SH3BP5) [NM_004844]
45. growth differentiation factor 15 (GDF15) [NM_004864]
46. ras homolog gene family, member C (RHOC) [NM_175744]
47. estrogen receptor 1 (ESR1) [NM_000125]
48. trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
49. aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2) [NM_014862]
50. v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro / glioblastoma derived oncogene homolog (avian) (ERBB2) [NM_004448]
51. tribbles homolog 3 (Drosophila) (TRIB3) [NM_021158]
52. tyrosyl-tRNA synthetase (YARS) [NM_003680]
53. quiescin Q6 (QSCN6) [NM_002826]
54. cyclin A1 (CCNA1) [NM_003914]
55. interferon-related developmental regulator 1 (IFRD1) [NM_001550]
56. matrix Gla protein (MGP) [NM_000900]
57. amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]
58. insulin-like growth factor binding protein 4 (IGFBP4) [NM_001552]
59. Kruppel-like factor 10 (KLF10) [NM_005655]
60. calpain, small subunit 1 (CAPNS1) [NM_001749]
61. interferon stimulated exonuclease gene 20kDa (ISG20) [NM_002201]
62. tumor-associated calcium signal transducer 2 (TACSTD2) [NM_002353]
63. PDZ domain containing 1 (PDZK1) [NM_002614]
64. ferritin, heavy polypeptide 1 (FTH1) [NM_002032]
65. peripheral myelin protein 22 (PMP22) [NM_000304]
66. lysosomal-associated membrane protein 3 (LAMP3) [NM_014398]
67. tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
68. tetraspanin 1 (TSPAN1) [NM_005727]
69. CCAAT / enhancer binding protein (C / EBP), beta (CEBPB) [NM_005194]
70. activating transcription factor 3 (ATF3) [NM_001674]
71. enolase 1, (alpha) (ENO1) [NM_001428]
72. activating transcription factor 3 (ATF3) [NM_004024]
73. early growth response 3 (EGR3) [NM_004430]
74. runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) (RUNX1) [NM_001001890]
75. v-fos FBJ murine osteosarcoma viral oncogene homolog (FOS) [NM_005252]
76. nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
77. transcription elongation factor A (SII), 1 (TCEA1) [NM_006756]
78. general transcription factor II, i (GTF2I) [NM_032999]
79. TAF9 RNA polymerase II, TATA box binding protein (TBP) -associated factor, 32kDa (TAF9) [NM_003187]
80. EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) [NM_004105]
81. reticulocalbin 1, EF-hand calcium binding domain (RCN1) [NM_002901]
82. cadherin 18, type 2 (CDH18) [NM_004934]
83. S100 calcium binding protein P (S100P) [NM_005980]
84. chromosome 1 open reading frame 19 (C1orf19) [NM_052965]
85. IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (IMP4) [NM_033416]
86. elongation factor Tu GTP binding domain containing 2 (EFTUD2) (U5-116KD) [NM_004247]
87. glycyl-tRNA synthetase (GARS) [NM_002047]
88. eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa (EIF3S9) [NM_003751]
89. solute carrier family 12 (sodium / potassium / chloride transporters), member 2 (SLC12A2) [NM_001046]
90. solute carrier family 7 (cationic amino acid transporter, y + system), member 5 (SLC7A5) [NM_003486]
91. solute carrier family 1 (glutamate / neutral amino acid transporter), member 4 (SLC1A4) [NM_003038]
92. solute carrier family 7, (cationic amino acid transporter, y + system) member 11 (SLC7A11) [NM_014331]
93. lipocalin 2 (oncogene 24p3) (LCN2) [NM_005564]
94. exportin, tRNA (nuclear export receptor for tRNAs) (XPOT) [NM_007235]
95. solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5) [NM_005628]
96. chloride intracellular channel 4 (CLIC4) [NM_013943]
97. transcobalamin I (vitamin B12 binding protein, R binder family) (TCN1) (NM_0
01062]
98. synaptogyrin 2 (SYNGR2) [NM_004710]
99. transmembrane 4 L six family member 1 (TM4SF1) [NM_014220]
100. heat shock 70kDa protein 1A (HSPA1A) [NM_005345]
101. heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5) [NM_005347]
102. heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1) (TRA1) [NM_003299]
103. chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1) [NM_006807]
104. H3 histone, family 3B (H3.3B) (H3F3B) [NM_005324]
105. retinoblastoma binding protein 8 (RBBP8) [NM_002894]
106. tumor protein D52-like 1 (TPD52L1) [NM_003287]
107. absent in melanoma 1 (AIM1) [NM_001624]
108. chromosome 19 open reading frame 21 (C19orf21) [NM_173481]
109. SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341]
110. selenium binding protein 1 (SELENBP1) [NM_003944]
111. KIAA0196 (KIAA0196) [NM_014846]
112. LOC401397 [BC065765]
113. phorbol-12-myristate-13-acetate-induced protein 1 (PMAIP1) [NM_021127]
114. PREDICTED: paternally expressed 10 (PEG10) [XM_496907]
115. DAZ associated protein 2 (DAZAP2) [NM_014764].
前記エストロゲン応答遺伝子が、請求項4に記載の115個のエストロゲン応答遺伝子の全部を含むことを特徴とする請求項4に記載の方法。   5. The method of claim 4, wherein the estrogen responsive gene comprises all of the 115 estrogen responsive genes of claim 4. 前記漢方薬もしくはその活性成分又はエストロゲンの生体への適用が、前記漢方薬もしくはその活性成分又はエストロゲンを含む培地中での細胞の培養により行われる請求項1〜5のいずれか1項に記載の方法。   The method according to any one of claims 1 to 5, wherein the application of the traditional Chinese medicine or an active ingredient thereof or estrogen to a living body is performed by culturing cells in a medium containing the traditional Chinese medicine or an active ingredient thereof or estrogen. 細胞がMCF-7細胞である請求項6記載の方法。   The method according to claim 6, wherein the cells are MCF-7 cells. 遺伝子プロファイルを、前記エストロゲン応答遺伝子またはその断片を固相化したDNAマイクロアレイを用いて得る、請求項1〜7のいずれか1項に記載の方法。   The method according to any one of claims 1 to 7, wherein a gene profile is obtained using a DNA microarray on which the estrogen-responsive gene or a fragment thereof is immobilized. 遺伝子プロファイルを、前記エストロゲン応答遺伝子またはその断片をターゲットとする定量PCRにより得る、請求項1〜7のいずれか1項に記載の方法。   The method according to any one of claims 1 to 7, wherein a gene profile is obtained by quantitative PCR targeting the estrogen-responsive gene or a fragment thereof. 前記エストロゲン様活性を有する漢方薬の活性成分の有効活性の評価が、前記漢方薬若しくはその活性成分、又はその活性成分を含む植物、抽出物若しくは組成物中の有効活性の探索若しくは評価、又は漢方薬若しくはその活性成分を含む組成物の品質管理のための評価である請求項1〜9のいずれか1項に記載の方法。   The evaluation of the effective activity of the active ingredient of the Kampo medicine having estrogenic activity is the search or evaluation of the effective activity in the Kampo medicine or its active ingredient, or the plant, extract or composition containing the active ingredient, or the Kampo medicine or its The method according to claim 1, which is an evaluation for quality control of a composition containing an active ingredient. 請求項1〜10のいずれかに記載のエストロゲン様活性を有する漢方薬(漢方生薬を含む)の活性成分の有効活性を評価する方法に用いる試薬であって、
当該試薬が、以下1.〜115.に示す115個のエストロゲン応答遺伝子から選択された遺伝子の塩基配列の全部またはその連続した10〜200bpからなる部分配列を含むDNAからなり
当該エストロゲン応答遺伝子が、「enzyme」グループ(1.〜24.)、「signaling」グループ(25.〜50.)「proliferation」グループ(51.〜68.)「transcription」グループ(69.〜79.)「transport」グループ(80.〜97.)「others」グループ(98.〜115.)の機能別グループにグループ分けされたいずれかのグループから、少なくとも10個の遺伝子が選択されていることを特徴とする、試薬;
1.phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2)[NM_004563]
2.phosphoserine aminotransferase 1 (PSAT1)[NM_058179]
3.asparagine synthetase (ASNS)[NM_133436]
4.phosphoglycerate dehydrogenase (PHGDH)[NM_006623]
5.serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2)[NM_005412]
6.24-dehydrocholesterol reductase (DHCR24)[NM_014762]
7.tryptophanyl-tRNA synthetase (WARS) [NM_004184]
8.fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (FUT8) [NM_178155]
9.argininosuccinate synthetase (ASS) [NM_054012]
10.enolase 2 (gamma, neuronal) (ENO2) [NM_001975]
11.enolase 3 (beta, muscle) (ENO3) [NM_001976]
12.fructose-1,6-bisphosphatase 1 (FBP1) [NM_000507]
13.methylenetetrahydrofolate dehydrogenase (NADP+dependent) 2, methenyl
tetrahydrofolate cyclohydrolase (MTHFD2) [NM_006636]
14.carnitine palmitoyltransferase 1A (liver) (CPT1A) [NM_001876]
15.peptidase (mitochondrial processing) alpha (PMPCA) [NM_015160]
16.cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
17.glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (GOT1) [NM_002079]
18.sorbitol dehydrogenase (SORD) [NM_003104]
19.stearoyl-CoA desaturase (delta-9-desaturase) (SCD) [NM_005063]
20.surfactant, pulmonary-associated protein B (SFTPB) [NM_000542]
21.serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 (SERPINA3) [NM_001085]
22.aconitase 2, mitochondrial (ACO2) [NM_001098]
23.glutamine-fructose-6-phosphate transaminase 1 (GFPT1) [NM_002056]
24.CDP-diacylglycerol-inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (CDIPT) [NM_006319]
25.ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586 ]
26.protein kinase C, delta (PRKCD) [NM_006254]
27.unc-51-like kinase 1 (C.elegans) (ULK1) [NM_003565]
28.integrin-linked kinase (ILK) [NM_004517]
29.protein kinase C substrate 80K-H (PRKCSH) [NM_002743]
30.cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
31.phosphoinositide-3-kinase, class 3 (PIK3C3) [NM_002647]
32.poliovirus receptor (PVR) [NM_006505]
33.progesterone receptor (PGR) [NM_000926]
34.insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]
35.catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) (CTNND2) [NM_001332]
36.neuropeptide Y receptor Y1 (NPY1R) [NM_000909]
37.protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18) [NM_014369]
38.Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
39.endothelin 2 (EDN2) [NM_001956]
40.stanniocalcin 2 (STC2) [NM_003714]
41.lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP) [NM_005567]
42.angiotensin II receptor, type 1 (AGTR1) [NM_000685]
43.proprotein convertase subtilisin/kexin type 6 (PCSK6) [NM_002570]
44.SH3-domain binding protein 5 (BTK-associated) (SH3BP5) [NM_004844]
45.growth differentiation factor 15 (GDF15) [NM_004864]
46.ras homolog gene family, member C (RHOC) [NM_175744]
47.estrogen receptor 1 (ESR1) [NM_000125]
48.trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
49.aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2) [NM_014862]
50.v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) (ERBB2) [NM_004448]
51.tribbles homolog 3 (Drosophila) (TRIB3) [NM_021158]
52.tyrosyl-tRNA synthetase (YARS) [NM_003680]
53.quiescin Q6 (QSCN6) [NM_002826]
54.cyclin A1 (CCNA1) [NM_003914]
55.interferon-related developmental regulator 1 (IFRD1) [NM_001550]
56.matrix Gla protein (MGP) [NM_000900]
57.amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]
58.insulin-like growth factor binding protein 4 (IGFBP4) [NM_001552]
59.Kruppel-like factor 10 (KLF10) [NM_005655]
60.calpain, small subunit 1 (CAPNS1) [NM_001749]
61.interferon stimulated exonuclease gene 20kDa (ISG20) [NM_002201]
62.tumor-associated calcium signal transducer 2 (TACSTD2) [NM_002353]
63.PDZ domain containing 1 (PDZK1) [NM_002614]
64.ferritin, heavy polypeptide 1 (FTH1) [NM_002032]
65.peripheral myelin protein 22 (PMP22) [NM_000304]
66.lysosomal-associated membrane protein 3 (LAMP3) [NM_014398]
67.tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
68.tetraspanin 1 (TSPAN1) [NM_005727]
69.CCAAT/enhancer binding protein (C/EBP), beta (CEBPB) [NM_005194]
70.activating transcription factor 3 (ATF3) [NM_001674]
71.enolase 1, (alpha) (ENO1) [NM_001428]
72.activating transcription factor 3 (ATF3) [NM_004024]
73.early growth response 3 (EGR3) [NM_004430]
74.runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) (RUNX1) [NM_001001890]
75.v-fos FBJ murine osteosarcoma viral oncogene homolog (FOS) [NM_005252]
76.nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
77.transcription elongation factor A (SII), 1 (TCEA1) [NM_006756]
78.general transcription factor II, i (GTF2I) [NM_032999]
79.TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa (TAF9) [NM_003187]
80.EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) [NM_004105]
81.reticulocalbin 1, EF-hand calcium binding domain (RCN1) [NM_002901]
82.cadherin 18, type 2 (CDH18) [NM_004934]
83.S100 calcium binding protein P (S100P) [NM_005980]
84.chromosome 1 open reading frame 19 (C1orf19) [NM_052965]
85.IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (IMP4) [NM_033416]
86.elongation factor Tu GTP binding domain containing 2 (EFTUD2)(U5-116KD) [NM_004247]
87.glycyl-tRNA synthetase (GARS) [NM_002047]
88.eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa (EIF3S9) [NM_003751]
89.solute carrier family 12 (sodium/potassium/chloride transporters), member 2 (SLC12A2) [NM_001046]
90.solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 (SLC7A5) [NM_003486]
91.solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (SLC1A4) [NM_003038]
92.solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 (SLC7A11) [NM_014331]
93.lipocalin 2 (oncogene 24p3) (LCN2) [NM_005564]
94.exportin, tRNA (nuclear export receptor for tRNAs) (XPOT) [NM_007235]
95.solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5) [NM_005628]
96.chloride intracellular channel 4 (CLIC4) [NM_013943]
97.transcobalamin I (vitamin B12 binding protein, R binder family) (TCN1) [NM_0
01062]
98.synaptogyrin 2 (SYNGR2) [NM_004710]
99.transmembrane 4 L six family member 1 (TM4SF1) [NM_014220]
100.heat shock 70kDa protein 1A (HSPA1A) [NM_005345]
101.heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5) [NM_005347]
102.heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1) (TRA1)[ NM_003299]
103.chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1) [NM_006807]
104.H3 histone, family 3B (H3.3B) (H3F3B) [NM_005324]
105.retinoblastoma binding protein 8 (RBBP8) [NM_002894]
106.tumor protein D52-like 1 (TPD52L1) [NM_003287]
107.absent in melanoma 1 (AIM1) [NM_001624]
108.chromosome 19 open reading frame 21 (C19orf21) [NM_173481]
109.SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341]
110.selenium binding protein 1 (SELENBP1) [NM_003944]
111.KIAA0196 (KIAA0196) [NM_014846]
112.LOC401397 [BC065765]
113.phorbol-12-myristate-13-acetate-induced protein 1 (PMAIP1) [NM_021127]
114.PREDICTED: paternally expressed 10 (PEG10) [XM_496907]
115.DAZ associated protein 2 (DAZAP2) [NM_014764]。
A reagent for use in a method for evaluating the effective activity of an active ingredient of a traditional Chinese medicine (including traditional Chinese medicine) having an estrogenic activity according to any one of claims 1 to 10,
The reagent, following 1.~115 become. 115 pieces of all or partial sequence thereof consisting of contiguous 10~200bp nucleotide sequence of genes selected from the estrogen-responsive genes shown in the including DNA,
The estrogen responsive gene is expressed in the “enzyme” group (1.-24.), The “signaling” group (25.-50.), The “proliferation” group (51.-68.), The “transcription” group (69.-79. ) Check that at least 10 genes have been selected from one of the groups grouped by function in the “transport” group (80.-97.) And “others” group (98.-115.). Features, reagents;
1. phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2) [NM_004563]
2. phosphoserine aminotransferase 1 (PSAT1) [NM_058179]
3. asparagine synthetase (ASNS) [NM_133436]
Four. phosphoglycerate dehydrogenase (PHGDH) [NM_006623]
Five. serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2) [NM_005412]
6. 24-dehydrocholesterol reductase (DHCR24) [NM_014762]
7. tryptophanyl-tRNA synthetase (WARS) [NM_004184]
8. fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (FUT8) [NM_178155]
9. argininosuccinate synthetase (ASS) [NM_054012]
Ten. enolase 2 (gamma, neuronal) (ENO2) [NM_001975]
11. enolase 3 (beta, muscle) (ENO3) [NM_001976]
12. fructose-1,6-bisphosphatase 1 (FBP1) [NM_000507]
13. methylenetetrahydrofolate dehydrogenase (NADP + dependent) 2, methenyl
tetrahydrofolate cyclohydrolase (MTHFD2) [NM_006636]
14. carnitine palmitoyltransferase 1A (liver) (CPT1A) [NM_001876]
15. peptidase (mitochondrial processing) alpha (PMPCA) [NM_015160]
16. cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
17. glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (GOT1) [NM_002079]
18. sorbitol dehydrogenase (SORD) [NM_003104]
19. stearoyl-CoA desaturase (delta-9-desaturase) (SCD) [NM_005063]
20. surfactant, pulmonary-associated protein B (SFTPB) [NM_000542]
twenty one. serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 (SERPINA3) [NM_001085]
twenty two. aconitase 2, mitochondrial (ACO2) [NM_001098]
twenty three. glutamine-fructose-6-phosphate transaminase 1 (GFPT1) [NM_002056]
twenty four. CDP-diacylglycerol-inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (CDIPT) [NM_006319]
twenty five. ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586]
26. protein kinase C, delta (PRKCD) [NM_006254]
27. unc-51-like kinase 1 (C. elegans) (ULK1) [NM_003565]
28. integrin-linked kinase (ILK) [NM_004517]
29. protein kinase C substrate 80K-H (PRKCSH) [NM_002743]
30. cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
31. phosphoinositide-3-kinase, class 3 (PIK3C3) [NM_002647]
32. poliovirus receptor (PVR) [NM_006505]
33. progesterone receptor (PGR) [NM_000926]
34. insulin-like growth factor binding protein 5 (IGFBP5) [NM_000599]
35. catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) (CTNND2) [NM_001332]
36. neuropeptide Y receptor Y1 (NPY1R) [NM_000909]
37. protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18) [NM_014369]
38. Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
39. endothelin 2 (EDN2) [NM_001956]
40. stanniocalcin 2 (STC2) [NM_003714]
41. lectin, galactoside-binding, soluble, 3 binding protein (LGALS3BP) [NM_005567]
42. angiotensin II receptor, type 1 (AGTR1) [NM_000685]
43. proprotein convertase subtilisin / kexin type 6 (PCSK6) [NM_002570]
44. SH3-domain binding protein 5 (BTK-associated) (SH3BP5) [NM_004844]
45. growth differentiation factor 15 (GDF15) [NM_004864]
46. ras homolog gene family, member C (RHOC) [NM_175744]
47. estrogen receptor 1 (ESR1) [NM_000125]
48. trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
49. aryl-hydrocarbon receptor nuclear translocator 2 (ARNT2) [NM_014862]
50. v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro / glioblastoma derived oncogene homolog (avian) (ERBB2) [NM_004448]
51. tribbles homolog 3 (Drosophila) (TRIB3) [NM_021158]
52. tyrosyl-tRNA synthetase (YARS) [NM_003680]
53. quiescin Q6 (QSCN6) [NM_002826]
54. cyclin A1 (CCNA1) [NM_003914]
55. interferon-related developmental regulator 1 (IFRD1) [NM_001550]
56. matrix Gla protein (MGP) [NM_000900]
57. amphiregulin (schwannoma-derived growth factor) (AREG) [NM_001657]
58. insulin-like growth factor binding protein 4 (IGFBP4) [NM_001552]
59. Kruppel-like factor 10 (KLF10) [NM_005655]
60. calpain, small subunit 1 (CAPNS1) [NM_001749]
61. interferon stimulated exonuclease gene 20kDa (ISG20) [NM_002201]
62. tumor-associated calcium signal transducer 2 (TACSTD2) [NM_002353]
63. PDZ domain containing 1 (PDZK1) [NM_002614]
64. ferritin, heavy polypeptide 1 (FTH1) [NM_002032]
65. peripheral myelin protein 22 (PMP22) [NM_000304]
66. lysosomal-associated membrane protein 3 (LAMP3) [NM_014398]
67. tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
68. tetraspanin 1 (TSPAN1) [NM_005727]
69. CCAAT / enhancer binding protein (C / EBP), beta (CEBPB) [NM_005194]
70. activating transcription factor 3 (ATF3) [NM_001674]
71. enolase 1, (alpha) (ENO1) [NM_001428]
72. activating transcription factor 3 (ATF3) [NM_004024]
73. early growth response 3 (EGR3) [NM_004430]
74. runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) (RUNX1) [NM_001001890]
75. v-fos FBJ murine osteosarcoma viral oncogene homolog (FOS) [NM_005252]
76. nuclear receptor interacting protein 1 (NRIP1) [NM_003489]
77. transcription elongation factor A (SII), 1 (TCEA1) [NM_006756]
78. general transcription factor II, i (GTF2I) [NM_032999]
79. TAF9 RNA polymerase II, TATA box binding protein (TBP) -associated factor, 32kDa (TAF9) [NM_003187]
80. EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1) [NM_004105]
81. reticulocalbin 1, EF-hand calcium binding domain (RCN1) [NM_002901]
82. cadherin 18, type 2 (CDH18) [NM_004934]
83. S100 calcium binding protein P (S100P) [NM_005980]
84. chromosome 1 open reading frame 19 (C1orf19) [NM_052965]
85. IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (IMP4) [NM_033416]
86. elongation factor Tu GTP binding domain containing 2 (EFTUD2) (U5-116KD) [NM_004247]
87. glycyl-tRNA synthetase (GARS) [NM_002047]
88. eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa (EIF3S9) [NM_003751]
89. solute carrier family 12 (sodium / potassium / chloride transporters), member 2 (SLC12A2) [NM_001046]
90. solute carrier family 7 (cationic amino acid transporter, y + system), member 5 (SLC7A5) [NM_003486]
91. solute carrier family 1 (glutamate / neutral amino acid transporter), member 4 (SLC1A4) [NM_003038]
92. solute carrier family 7, (cationic amino acid transporter, y + system) member 11 (SLC7A11) [NM_014331]
93. lipocalin 2 (oncogene 24p3) (LCN2) [NM_005564]
94. exportin, tRNA (nuclear export receptor for tRNAs) (XPOT) [NM_007235]
95. solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5) [NM_005628]
96. chloride intracellular channel 4 (CLIC4) [NM_013943]
97. transcobalamin I (vitamin B12 binding protein, R binder family) (TCN1) (NM_0
01062]
98. synaptogyrin 2 (SYNGR2) [NM_004710]
99. transmembrane 4 L six family member 1 (TM4SF1) [NM_014220]
100. heat shock 70kDa protein 1A (HSPA1A) [NM_005345]
101. heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5) [NM_005347]
102. heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1) (TRA1) [NM_003299]
103. chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1) [NM_006807]
104. H3 histone, family 3B (H3.3B) (H3F3B) [NM_005324]
105. retinoblastoma binding protein 8 (RBBP8) [NM_002894]
106. tumor protein D52-like 1 (TPD52L1) [NM_003287]
107. absent in melanoma 1 (AIM1) [NM_001624]
108. chromosome 19 open reading frame 21 (C19orf21) [NM_173481]
109. SH3 domain binding glutamic acid-rich protein (SH3BGR) [NM_007341]
110. selenium binding protein 1 (SELENBP1) [NM_003944]
111. KIAA0196 (KIAA0196) [NM_014846]
112. LOC401397 [BC065765]
113. phorbol-12-myristate-13-acetate-induced protein 1 (PMAIP1) [NM_021127]
114. PREDICTED: paternally expressed 10 (PEG10) [XM_496907]
115. DAZ associated protein 2 (DAZAP2) [NM_014764].
前記遺伝子の塩基配列の全部またはその連続した10〜200bpからなる部分配列を含むDNAが固定化されたDNAマイクロアレイである、請求項11に記載の試薬。 A partial sequence consisting of all or a continuous 10~200bp the base sequence of the gene including DNA is immobilized DNA microarray, reagent according to claim 11. 前記遺伝子の塩基配列の全部またはその連続した10〜200bpからなる部分配列を含むDNAからなる定量PCR用プライマーセットである、請求項11に記載の試薬。 In whole or quantitative PCR primer set consisting of a partial sequence consisting of the consecutive 10~200bp from including DNA base sequence of the gene, reagent according to claim 11. 以下の遺伝子の塩基配列の全部またはその連続した10〜200bpからなる部分配列を含むDNAからなる定量PCR用プライマーセットである、請求項13記載の試薬;
16.cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
25.ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586 ]
26.protein kinase C, delta (PRKCD) [NM_006254]
30.cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
38.Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
48.trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
67.tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
76.nuclear receptor interacting protein 1 (NRIP1) [NM_003489]。
A partial sequence consisting of all or 10~200bp its continuous nucleotide sequence of the following genes is quantitative PCR primer set consisting of including DNA, reagent according to claim 13;
16. cathepsin D (lysosomal aspartyl peptidase) (CTSD) [NM_001909]
twenty five. ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3) [NM_004586]
26. protein kinase C, delta (PRKCD) [NM_006254]
30. cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A) [NM_000389]
38. Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA) [NM_004309]
48. trefoil factor 1 (breast cancer, estrogen-inducible sequence expressed in) (TFF1) [NM_003225]
67. tumor protein p53 inducible protein 11 (TP53I11) [NM_006034]
76. nuclear receptor interacting protein 1 (NRIP1) [NM_003489].
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