JP2023538074A - 連続エンコーディング方法及び関連キット - Google Patents

連続エンコーディング方法及び関連キット Download PDF

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Publication number
JP2023538074A
JP2023538074A JP2023511925A JP2023511925A JP2023538074A JP 2023538074 A JP2023538074 A JP 2023538074A JP 2023511925 A JP2023511925 A JP 2023511925A JP 2023511925 A JP2023511925 A JP 2023511925A JP 2023538074 A JP2023538074 A JP 2023538074A
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tag
nucleic acid
binding
binding agent
polypeptide
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JP2023511925A
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Japanese (ja)
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JP2023538074A5 (https=
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マーク エス． チー，
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エンコディア， インコーポレイテッド
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Publication of JP2023538074A publication Critical patent/JP2023538074A/ja
Publication of JP2023538074A5 publication Critical patent/JP2023538074A5/ja
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1065—Preparation or screening of tagged libraries, e.g. tagged microorganisms by STM-mutagenesis, tagged polynucleotides, gene tags
    • C—CHEMISTRY; METALLURGY
    • C40—COMBINATORIAL TECHNOLOGY
    • C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B70/00—Tags or labels specially adapted for combinatorial chemistry or libraries, e.g. fluorescent tags or bar codes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • Biomedical Technology (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Plant Pathology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Immunology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Peptides Or Proteins (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
JP2023511925A 2020-08-19 2021-08-16 連続エンコーディング方法及び関連キット Pending JP2023538074A (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US202063067744P 2020-08-19 2020-08-19
US63/067,744 2020-08-19
PCT/US2021/046164 WO2022040098A1 (en) 2020-08-19 2021-08-16 Sequential encoding methods and related kits

Publications (2)

Publication Number Publication Date
JP2023538074A true JP2023538074A (ja) 2023-09-06
JP2023538074A5 JP2023538074A5 (https=) 2024-08-27

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ID=80350651

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JP2023511925A Pending JP2023538074A (ja) 2020-08-19 2021-08-16 連続エンコーディング方法及び関連キット

Country Status (6)

Country Link
US (1) US20230136966A1 (https=)
EP (1) EP4196581B1 (https=)
JP (1) JP2023538074A (https=)
CN (1) CN116685725A (https=)
CA (1) CA3176922A1 (https=)
WO (1) WO2022040098A1 (https=)

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* Cited by examiner, † Cited by third party
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WO2023201365A1 (en) * 2022-04-15 2023-10-19 Encodia, Inc. High throughput peptide identification using conjugated binders and kinetic encoding
US20250154584A1 (en) * 2023-11-09 2025-05-15 Encodia, Inc. Methods for identifying polypeptides

Citations (2)

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WO2018204854A1 (en) * 2017-05-05 2018-11-08 The United States Of America, As Represented By The Secretary, Department Of Health And Human Services Methods of preparing a re-usable single cell and methods for analyzing the epigenome, transcriptome, and genome of a single cell
WO2019089836A1 (en) * 2017-10-31 2019-05-09 Encodia, Inc. Kits for analysis using nucleic acid encoding and/or label

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US5834252A (en) 1995-04-18 1998-11-10 Glaxo Group Limited End-complementary polymerase reaction
JP3124507B2 (ja) 1996-05-24 2001-01-15 セイコーインスツルメンツ株式会社 タンパク質あるいはペプチドのカルボキシ末端からのアミノ酸配列を決定する方法
US20060183863A1 (en) 2005-02-14 2006-08-17 Ciphergen Biosystems, Inc. Zwitterionic polymers
CN100510069C (zh) 2006-07-13 2009-07-08 上海交通大学 等温单向生长的基因合成方法
CN101560538A (zh) 2008-04-17 2009-10-21 上海青兰生物科技有限公司 一种等温双向生长的基因合成方法
CA2745197A1 (en) 2008-12-01 2010-06-10 Research Triangle Institute Concurrent identification of multitudes of polypeptides
US9566335B1 (en) 2009-09-25 2017-02-14 The Governing Council Of The University Of Toronto Protein sequencing method and reagents
WO2012049285A1 (en) 2010-10-14 2012-04-19 Octapharma Ag A method for the quantitative glycosylation analysis of proteins
ES2645953T3 (es) 2011-01-17 2017-12-11 Life Technologies Corporation Ligamiento enzimático de ácidos nucleicos
AU2012275390A1 (en) 2011-06-28 2014-01-16 Whitehead Institute For Biomedical Research Using sortases to install click chemistry handles for protein ligation
US9435810B2 (en) 2013-03-15 2016-09-06 Washington University Molecules and methods for iterative polypeptide analysis and processing
CN104212791B (zh) 2013-06-03 2019-03-08 无锡青兰生物科技有限公司 一种基于双向等温延伸的核酸合成方法
CN107406890B (zh) 2015-02-10 2023-07-18 亿明达股份有限公司 用于分析细胞组分的方法和组合物
EP3452591B1 (en) * 2016-05-02 2023-08-16 Encodia, Inc. Macromolecule analysis employing nucleic acid encoding
CN109791157B (zh) * 2016-09-26 2022-06-07 贝克顿迪金森公司 使用具有条形码化的寡核苷酸序列的试剂测量蛋白质表达
JP7228510B2 (ja) * 2016-11-08 2023-02-24 ベクトン・ディキンソン・アンド・カンパニー 細胞標識分類の方法
SG11202003923PA (en) * 2017-10-31 2020-05-28 Encodia Inc Methods and kits using nucleic acid encoding and/or label
CA3081446A1 (en) * 2017-10-31 2019-05-09 Encodia, Inc. Methods and compositions for polypeptide analysis
CA3110800A1 (en) * 2018-07-12 2020-01-16 Board Of Regents, The University Of Texas System Molecular neighborhood detection by oligonucleotides
EP3947667A4 (en) 2019-03-26 2022-12-28 Encodia, Inc. MODIFIED CLEAVASE, USES THEREOF AND RELATED KITS
WO2020223133A1 (en) 2019-04-30 2020-11-05 Encodia, Inc. Methods and reagents for cleavage of the n-terminal amino acid from a polypeptide
CN114072499B (zh) 2019-04-30 2024-08-06 Encodia公司 用于制备分析物的方法和相关试剂盒
US11926820B2 (en) * 2019-09-13 2024-03-12 Google Llc Methods and compositions for protein and peptide sequencing
EP4073263A4 (en) 2020-01-07 2023-11-08 Encodia, Inc. METHOD FOR STABLE COMPLEX FORMATION AND CORRESPONDING KITS

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2018204854A1 (en) * 2017-05-05 2018-11-08 The United States Of America, As Represented By The Secretary, Department Of Health And Human Services Methods of preparing a re-usable single cell and methods for analyzing the epigenome, transcriptome, and genome of a single cell
WO2019089836A1 (en) * 2017-10-31 2019-05-09 Encodia, Inc. Kits for analysis using nucleic acid encoding and/or label

Also Published As

Publication number Publication date
EP4196581A1 (en) 2023-06-21
CA3176922A1 (en) 2022-02-24
US20230136966A1 (en) 2023-05-04
EP4196581A4 (en) 2024-05-29
WO2022040098A1 (en) 2022-02-24
AU2021329812A1 (en) 2023-03-09
EP4196581B1 (en) 2026-02-25
CN116685725A (zh) 2023-09-01

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