IL281417A - Methods and systems for evaluating instability in microsatellites - Google Patents
Methods and systems for evaluating instability in microsatellitesInfo
- Publication number
- IL281417A IL281417A IL281417A IL28141721A IL281417A IL 281417 A IL281417 A IL 281417A IL 281417 A IL281417 A IL 281417A IL 28141721 A IL28141721 A IL 28141721A IL 281417 A IL281417 A IL 281417A
- Authority
- IL
- Israel
- Prior art keywords
- systems
- methods
- microsatellite instability
- assessing microsatellite
- assessing
- Prior art date
Links
Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
- G16H20/00—ICT specially adapted for therapies or health-improving plans, e.g. for handling prescriptions, for steering therapy or for monitoring patient compliance
- G16H20/40—ICT specially adapted for therapies or health-improving plans, e.g. for handling prescriptions, for steering therapy or for monitoring patient compliance relating to mechanical, radiation or invasive therapies, e.g. surgery, laser therapy, dialysis or acupuncture
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/156—Polymorphic or mutational markers
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Physics & Mathematics (AREA)
- Chemical & Material Sciences (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Medical Informatics (AREA)
- General Health & Medical Sciences (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Bioinformatics & Computational Biology (AREA)
- Evolutionary Biology (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Theoretical Computer Science (AREA)
- Genetics & Genomics (AREA)
- Organic Chemistry (AREA)
- Molecular Biology (AREA)
- Immunology (AREA)
- Zoology (AREA)
- Pathology (AREA)
- Wood Science & Technology (AREA)
- Epidemiology (AREA)
- Public Health (AREA)
- Evolutionary Computation (AREA)
- Databases & Information Systems (AREA)
- Software Systems (AREA)
- Artificial Intelligence (AREA)
- Bioethics (AREA)
- Computer Vision & Pattern Recognition (AREA)
- Data Mining & Analysis (AREA)
- Oncology (AREA)
- Biochemistry (AREA)
- Hospice & Palliative Care (AREA)
- Microbiology (AREA)
- General Engineering & Computer Science (AREA)
- Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
- Surgery (AREA)
- Urology & Nephrology (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201862731718P | 2018-09-14 | 2018-09-14 | |
| PCT/US2019/051138 WO2020056347A1 (en) | 2018-09-14 | 2019-09-13 | Methods and systems for assessing microsatellite instability |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| IL281417A true IL281417A (en) | 2021-04-29 |
Family
ID=69777893
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| IL281417A IL281417A (en) | 2018-09-14 | 2021-03-11 | Methods and systems for evaluating instability in microsatellites |
Country Status (11)
| Country | Link |
|---|---|
| US (1) | US20210358569A1 (OSRAM) |
| EP (1) | EP3850111A4 (OSRAM) |
| JP (1) | JP7514224B2 (OSRAM) |
| KR (1) | KR20210092196A (OSRAM) |
| CN (1) | CN112955570B (OSRAM) |
| AU (1) | AU2019339511A1 (OSRAM) |
| BR (1) | BR112021004763A2 (OSRAM) |
| CA (1) | CA3112562A1 (OSRAM) |
| IL (1) | IL281417A (OSRAM) |
| SG (1) | SG11202102528UA (OSRAM) |
| WO (1) | WO2020056347A1 (OSRAM) |
Families Citing this family (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| SG11202101400UA (en) | 2018-08-31 | 2021-03-30 | Guardant Health Inc | Microsatellite instability detection in cell-free dna |
| KR102688594B1 (ko) * | 2021-08-10 | 2024-07-24 | (주)디엑솜 | 현미부수체 지역의 서열 길이의 변화율을 이용한 현미부수체 불안정성 진단방법 |
| KR102781271B1 (ko) * | 2021-08-10 | 2025-03-17 | (주)디엑솜 | 현미부수체 지역의 서열 길이의 최대값과 최소값의 차이를 이용한 현미부수체 불안정성 진단방법 |
| CN114464257B (zh) * | 2022-03-15 | 2025-02-25 | 郑州安图生物工程股份有限公司 | 一种基于二代测序的微卫星不稳定性检测方法及装置 |
| CN118942537B (zh) * | 2023-09-21 | 2026-01-23 | 杭州链康医学检验实验室有限公司 | 一种构建标记微卫星位点稳定性预测模型的方法 |
Family Cites Families (7)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP3998347A1 (en) * | 2012-04-10 | 2022-05-18 | Vib Vzw | Novel markers for detecting microsatellite instability in cancer and determining synthetic lethality with inhibition of the dna base excision repair pathway |
| US20150337388A1 (en) * | 2012-12-17 | 2015-11-26 | Virginia Tech Intellectual Properties, Inc. | Methods and compositions for identifying global microsatellite instability and for characterizing informative microsatellite loci |
| WO2017008165A1 (en) * | 2015-07-14 | 2017-01-19 | British Columbia Cancer Agency Branch | Classification method and treatment for endometrial cancers |
| WO2017127742A1 (en) * | 2016-01-22 | 2017-07-27 | Grail, Inc. | Variant based disease diagnostics and tracking |
| GB201614474D0 (en) * | 2016-08-24 | 2016-10-05 | Univ Of Newcastle Upon Tyne The | Methods of identifying microsatellite instability |
| CN106755501B (zh) * | 2017-01-25 | 2020-11-17 | 广州燃石医学检验所有限公司 | 一种基于二代测序的同时检测微卫星位点稳定性和基因组变化的方法 |
| EP3717520B1 (en) * | 2017-12-01 | 2025-04-16 | Personal Genome Diagnostics Inc. | Process for microsatellite instability detection |
-
2019
- 2019-09-13 EP EP19860919.0A patent/EP3850111A4/en active Pending
- 2019-09-13 CA CA3112562A patent/CA3112562A1/en active Pending
- 2019-09-13 AU AU2019339511A patent/AU2019339511A1/en not_active Abandoned
- 2019-09-13 SG SG11202102528UA patent/SG11202102528UA/en unknown
- 2019-09-13 US US17/275,160 patent/US20210358569A1/en active Pending
- 2019-09-13 JP JP2021514069A patent/JP7514224B2/ja active Active
- 2019-09-13 KR KR1020217010575A patent/KR20210092196A/ko not_active Withdrawn
- 2019-09-13 CN CN201980069237.6A patent/CN112955570B/zh active Active
- 2019-09-13 BR BR112021004763-8A patent/BR112021004763A2/pt not_active Application Discontinuation
- 2019-09-13 WO PCT/US2019/051138 patent/WO2020056347A1/en not_active Ceased
-
2021
- 2021-03-11 IL IL281417A patent/IL281417A/en unknown
Also Published As
| Publication number | Publication date |
|---|---|
| AU2019339511A1 (en) | 2021-05-13 |
| SG11202102528UA (en) | 2021-04-29 |
| KR20210092196A (ko) | 2021-07-23 |
| US20210358569A1 (en) | 2021-11-18 |
| JP7514224B2 (ja) | 2024-07-10 |
| EP3850111A1 (en) | 2021-07-21 |
| CA3112562A1 (en) | 2020-03-19 |
| CN112955570B (zh) | 2025-01-21 |
| JP2022500764A (ja) | 2022-01-04 |
| WO2020056347A1 (en) | 2020-03-19 |
| EP3850111A4 (en) | 2022-06-29 |
| CN112955570A (zh) | 2021-06-11 |
| BR112021004763A2 (pt) | 2021-08-03 |
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