IL277682A - Universal method for extracting nucleic acid molecules from a diverse population of one or more types of microbes in a sample - Google Patents

Universal method for extracting nucleic acid molecules from a diverse population of one or more types of microbes in a sample

Info

Publication number
IL277682A
IL277682A IL277682A IL27768220A IL277682A IL 277682 A IL277682 A IL 277682A IL 277682 A IL277682 A IL 277682A IL 27768220 A IL27768220 A IL 27768220A IL 277682 A IL277682 A IL 277682A
Authority
IL
Israel
Prior art keywords
microbes
sample
types
nucleic acid
acid molecules
Prior art date
Application number
IL277682A
Other languages
Hebrew (he)
Original Assignee
Sun Genomics Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Sun Genomics Inc filed Critical Sun Genomics Inc
Publication of IL277682A publication Critical patent/IL277682A/en

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1003—Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00—Reactions demanding special reaction conditions
    • C12Q2527/125—Specific component of sample, medium or buffer
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00—Reactions demanding special reaction conditions
    • C12Q2527/137—Concentration of a component of medium

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Biomedical Technology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • General Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Plant Pathology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Immunology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
IL277682A 2018-04-02 2020-09-30 Universal method for extracting nucleic acid molecules from a diverse population of one or more types of microbes in a sample IL277682A (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201862651620P 2018-04-02 2018-04-02
PCT/US2019/025457 WO2019195342A1 (en) 2018-04-02 2019-04-02 Universal method for extracting nucleic acid molecules from a diverse population of one or more types of microbes in a sample

Publications (1)

Publication Number Publication Date
IL277682A true IL277682A (en) 2020-11-30

Family

ID=68101118

Family Applications (1)

Application Number Title Priority Date Filing Date
IL277682A IL277682A (en) 2018-04-02 2020-09-30 Universal method for extracting nucleic acid molecules from a diverse population of one or more types of microbes in a sample

Country Status (9)

Country Link
JP (2) JP2021520191A (en)
KR (1) KR20200140303A (en)
CN (1) CN112204139A (en)
AU (1) AU2019247693A1 (en)
CA (1) CA3095745A1 (en)
GB (1) GB2587545B (en)
IL (1) IL277682A (en)
SG (1) SG11202009744WA (en)
WO (1) WO2019195342A1 (en)

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113186185B (en) * 2020-01-14 2023-05-26 东北林业大学 Method for efficiently enriching host DNA from mammal feces

Family Cites Families (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ES2269129T3 (en) * 1999-04-09 2007-04-01 Exact Sciences Corporation PROCEDURES FOR DETECTING NUCLEIC ACIDS CANCER DEVELOPERS.
KR20050103085A (en) * 2004-04-24 2005-10-27 한국생명공학연구원 Genomic microarray for detecting lactic acid bacteria and method for diagnosing lactic acid bacteria using it
WO2012043183A1 (en) * 2010-09-28 2012-04-05 オリンパス株式会社 Method for synthesizing target nucleic acid in feces
LU91864B1 (en) * 2011-09-02 2013-03-04 Univ Luxembourg Method and kit for the isolation of genomic DNA, RNA, proteins and metabolites from a single biological sample
US9145553B2 (en) * 2012-06-15 2015-09-29 Ut-Battelle, Llc Method for isolating nucleic acids
WO2014029791A1 (en) * 2012-08-21 2014-02-27 Qiagen Gmbh Method for isolating nucleic acids from a formaldehyde releaser stabilized sample
ITMI20131473A1 (en) * 2013-09-06 2015-03-07 Sofar Spa METHOD OF ASSESSING THE EFFECTS OF A COMPOSITION INCLUDING MICRO-ORGANISMS ON THE INTESTINAL MICROBIOTE
CN106460048B (en) * 2014-04-28 2021-01-05 耶达研究及发展有限公司 Microbiome response to agents
CN107075588B (en) * 2014-10-21 2023-03-21 普梭梅根公司 Methods and systems for microbiome-derived diagnosis and treatment
US11773455B2 (en) * 2015-09-09 2023-10-03 Psomagen, Inc. Method and system for microbiome-derived diagnostics and therapeutics infectious disease and other health conditions associated with antibiotic usage
CN108368542B (en) * 2015-10-19 2022-04-08 多弗泰尔基因组学有限责任公司 Methods for genome assembly, haplotype phasing, and target-independent nucleic acid detection
CA3036702A1 (en) * 2016-09-15 2018-03-22 Sun Genomics Inc. Universal method for extracting nucleic acid molecules from a diverse population of one or more types of microbes in a sample
US10428370B2 (en) * 2016-09-15 2019-10-01 Sun Genomics, Inc. Universal method for extracting nucleic acid molecules from a diverse population of one or more types of microbes in a sample

Also Published As

Publication number Publication date
JP2024063020A (en) 2024-05-10
CA3095745A1 (en) 2019-10-10
GB2587545B (en) 2023-06-14
AU2019247693A1 (en) 2020-11-19
KR20200140303A (en) 2020-12-15
EP3775197A1 (en) 2021-02-17
GB202017361D0 (en) 2020-12-16
WO2019195342A1 (en) 2019-10-10
CN112204139A (en) 2021-01-08
SG11202009744WA (en) 2020-10-29
GB2587545A (en) 2021-03-31
JP2021520191A (en) 2021-08-19

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