HUE050641T2 - Eljárások és rendszerek képadat elemzésére - Google Patents

Eljárások és rendszerek képadat elemzésére

Info

Publication number
HUE050641T2
HUE050641T2 HUE14867596A HUE14867596A HUE050641T2 HU E050641 T2 HUE050641 T2 HU E050641T2 HU E14867596 A HUE14867596 A HU E14867596A HU E14867596 A HUE14867596 A HU E14867596A HU E050641 T2 HUE050641 T2 HU E050641T2
Authority
HU
Hungary
Prior art keywords
systems
methods
image data
analyzing image
analyzing
Prior art date
Application number
HUE14867596A
Other languages
English (en)
Inventor
Paul Belitz
Stephen Tanner
John Vieceli
Xiaoyu Chen
Original Assignee
Illumina Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Illumina Inc filed Critical Illumina Inc
Publication of HUE050641T2 publication Critical patent/HUE050641T2/hu

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A90/00Technologies having an indirect contribution to adaptation to climate change
    • Y02A90/10Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Biochemistry (AREA)
  • Molecular Biology (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Image Processing (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Algebra (AREA)
  • General Physics & Mathematics (AREA)
  • Mathematical Analysis (AREA)
  • Mathematical Optimization (AREA)
  • Mathematical Physics (AREA)
  • Pure & Applied Mathematics (AREA)
HUE14867596A 2013-12-03 2014-12-03 Eljárások és rendszerek képadat elemzésére HUE050641T2 (hu)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201361911319P 2013-12-03 2013-12-03
US201361915426P 2013-12-12 2013-12-12
US201361915455P 2013-12-12 2013-12-12

Publications (1)

Publication Number Publication Date
HUE050641T2 true HUE050641T2 (hu) 2020-12-28

Family

ID=53274278

Family Applications (1)

Application Number Title Priority Date Filing Date
HUE14867596A HUE050641T2 (hu) 2013-12-03 2014-12-03 Eljárások és rendszerek képadat elemzésére

Country Status (15)

Country Link
US (3) US10689696B2 (hu)
EP (3) EP3077943B1 (hu)
AU (3) AU2014360530B2 (hu)
CA (2) CA2928209C (hu)
CY (1) CY1123264T1 (hu)
DK (1) DK3077943T3 (hu)
ES (1) ES2808824T3 (hu)
HR (1) HRP20201397T1 (hu)
HU (1) HUE050641T2 (hu)
LT (1) LT3077943T (hu)
PL (1) PL3077943T3 (hu)
PT (1) PT3077943T (hu)
RS (1) RS60736B1 (hu)
SI (1) SI3077943T1 (hu)
WO (1) WO2015084985A2 (hu)

Families Citing this family (26)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP3497233B1 (en) 2016-08-08 2021-11-10 F. Hoffmann-La Roche AG Basecalling for stochastic sequencing processes
CN116612818A (zh) * 2017-01-06 2023-08-18 伊鲁米那股份有限公司 移相校正
NZ759644A (en) 2018-01-05 2022-07-01 Illumina Inc Method and system of detecting that a sequencer has a failing flow cell temperature control system
US11288576B2 (en) 2018-01-05 2022-03-29 Illumina, Inc. Predicting quality of sequencing results using deep neural networks
US11378544B2 (en) * 2018-01-08 2022-07-05 Illumina, Inc. High-throughput sequencing with semiconductor-based detection
EP3913358B1 (en) 2018-01-08 2023-09-06 Illumina Inc High-throughput sequencing with semiconductor-based detection
CN108629765B (zh) * 2018-04-20 2020-09-08 山东第一医科大学(山东省医学科学院) 基于序列阈值差的精子显微视频序列滤波质量客观评价方法
NL2023316B1 (en) * 2019-03-21 2020-09-28 Illumina Inc Artificial intelligence-based sequencing
US11347965B2 (en) 2019-03-21 2022-05-31 Illumina, Inc. Training data generation for artificial intelligence-based sequencing
US11210554B2 (en) 2019-03-21 2021-12-28 Illumina, Inc. Artificial intelligence-based generation of sequencing metadata
NL2023312B1 (en) 2019-03-21 2020-09-28 Illumina Inc Artificial intelligence-based base calling
WO2020205296A1 (en) 2019-03-21 2020-10-08 Illumina, Inc. Artificial intelligence-based generation of sequencing metadata
NL2023314B1 (en) 2019-03-21 2020-09-28 Illumina Inc Artificial intelligence-based quality scoring
US11593649B2 (en) 2019-05-16 2023-02-28 Illumina, Inc. Base calling using convolutions
EP4107735A2 (en) 2020-02-20 2022-12-28 Illumina, Inc. Artificial intelligence-based many-to-many base calling
US11188778B1 (en) 2020-05-05 2021-11-30 Illumina, Inc. Equalization-based image processing and spatial crosstalk attenuator
US20220067489A1 (en) * 2020-08-28 2022-03-03 Illumina, Inc. Detecting and Filtering Clusters Based on Artificial Intelligence-Predicted Base Calls
US11200446B1 (en) 2020-08-31 2021-12-14 Element Biosciences, Inc. Single-pass primary analysis
US11361194B2 (en) * 2020-10-27 2022-06-14 Illumina, Inc. Systems and methods for per-cluster intensity correction and base calling
US20220336054A1 (en) 2021-04-15 2022-10-20 Illumina, Inc. Deep Convolutional Neural Networks to Predict Variant Pathogenicity using Three-Dimensional (3D) Protein Structures
KR20240022490A (ko) 2021-06-29 2024-02-20 일루미나, 인코포레이티드 뉴클레오티드 염기 호출 및 염기 호출 품질을 결정하기 위한 신호-대-잡음비 메트릭
US11455487B1 (en) 2021-10-26 2022-09-27 Illumina Software, Inc. Intensity extraction and crosstalk attenuation using interpolation and adaptation for base calling
WO2023004065A1 (en) * 2021-07-23 2023-01-26 Illumina, Inc. Characterizing analytes in a sample using normalized signals
WO2023049215A1 (en) * 2021-09-22 2023-03-30 Illumina, Inc. Compressed state-based base calling
US20230343415A1 (en) * 2021-12-02 2023-10-26 Illumina Software, Inc. Generating cluster-specific-signal corrections for determining nucleotide-base calls
WO2024059852A1 (en) 2022-09-16 2024-03-21 Illumina, Inc. Cluster segmentation and conditional base calling

Family Cites Families (32)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2044616A1 (en) 1989-10-26 1991-04-27 Roger Y. Tsien Dna sequencing
US5846719A (en) 1994-10-13 1998-12-08 Lynx Therapeutics, Inc. Oligonucleotide tags for sorting and identification
US5750341A (en) 1995-04-17 1998-05-12 Lynx Therapeutics, Inc. DNA sequencing by parallel oligonucleotide extensions
US5916747A (en) 1995-06-30 1999-06-29 Visible Genetics Inc. Method and apparatus for alignment of signals for use in DNA based-calling
GB9620209D0 (en) 1996-09-27 1996-11-13 Cemu Bioteknik Ab Method of sequencing DNA
GB9626815D0 (en) 1996-12-23 1997-02-12 Cemu Bioteknik Ab Method of sequencing DNA
ES2563643T3 (es) 1997-04-01 2016-03-15 Illumina Cambridge Limited Método de secuenciación de ácido nucleico
US6969488B2 (en) 1998-05-22 2005-11-29 Solexa, Inc. System and apparatus for sequential processing of analytes
US6274320B1 (en) 1999-09-16 2001-08-14 Curagen Corporation Method of sequencing a nucleic acid
US7001792B2 (en) 2000-04-24 2006-02-21 Eagle Research & Development, Llc Ultra-fast nucleic acid sequencing device and a method for making and using the same
EP1975251A3 (en) 2000-07-07 2009-03-25 Visigen Biotechnologies, Inc. Real-time sequence determination
EP1354064A2 (en) 2000-12-01 2003-10-22 Visigen Biotechnologies, Inc. Enzymatic nucleic acid synthesis: compositions and methods for altering monomer incorporation fidelity
US7057026B2 (en) 2001-12-04 2006-06-06 Solexa Limited Labelled nucleotides
ES2407681T3 (es) 2002-08-23 2013-06-13 Illumina Cambridge Limited Nucleótidos modificados para la secuenciación de polinucleótidos.
GB0321306D0 (en) 2003-09-11 2003-10-15 Solexa Ltd Modified polymerases for improved incorporation of nucleotide analogues
JP2007525571A (ja) 2004-01-07 2007-09-06 ソレクサ リミテッド 修飾分子アレイ
CA2579150C (en) 2004-09-17 2014-11-25 Pacific Biosciences Of California, Inc. Apparatus and method for analysis of molecules
WO2006064199A1 (en) 2004-12-13 2006-06-22 Solexa Limited Improved method of nucleotide detection
JP4990886B2 (ja) 2005-05-10 2012-08-01 ソレックサ リミテッド 改良ポリメラーゼ
GB0514936D0 (en) 2005-07-20 2005-08-24 Solexa Ltd Preparation of templates for nucleic acid sequencing
US7405281B2 (en) 2005-09-29 2008-07-29 Pacific Biosciences Of California, Inc. Fluorescent nucleotide analogs and uses therefor
EP3373174A1 (en) 2006-03-31 2018-09-12 Illumina, Inc. Systems and devices for sequence by synthesis analysis
WO2008051530A2 (en) 2006-10-23 2008-05-02 Pacific Biosciences Of California, Inc. Polymerase enzymes and reagents for enhanced nucleic acid sequencing
US20100034444A1 (en) * 2008-08-07 2010-02-11 Helicos Biosciences Corporation Image analysis
US8392126B2 (en) 2008-10-03 2013-03-05 Illumina, Inc. Method and system for determining the accuracy of DNA base identifications
US8965076B2 (en) * 2010-01-13 2015-02-24 Illumina, Inc. Data processing system and methods
US20130060482A1 (en) * 2010-12-30 2013-03-07 Life Technologies Corporation Methods, systems, and computer readable media for making base calls in nucleic acid sequencing
US8951781B2 (en) 2011-01-10 2015-02-10 Illumina, Inc. Systems, methods, and apparatuses to image a sample for biological or chemical analysis
SI3623481T1 (sl) 2011-09-23 2022-01-31 Illumina, Inc. Sestavki za sekvenciranje nukleinske kisline
EP2788499B1 (en) 2011-12-09 2016-01-13 Illumina, Inc. Expanded radix for polymeric tags
CA2867665C (en) 2012-04-03 2022-01-04 Illumina, Inc. Integrated optoelectronic read head and fluidic cartridge useful for nucleic acid sequencing
US20160085910A1 (en) 2014-09-18 2016-03-24 Illumina, Inc. Methods and systems for analyzing nucleic acid sequencing data

Also Published As

Publication number Publication date
LT3077943T (lt) 2020-10-12
EP3940082A1 (en) 2022-01-19
AU2023200758A1 (en) 2023-03-09
US20200377938A1 (en) 2020-12-03
EP3077943A4 (en) 2017-06-28
US10689696B2 (en) 2020-06-23
US20210310065A1 (en) 2021-10-07
DK3077943T3 (da) 2020-09-07
WO2015084985A3 (en) 2015-07-30
SI3077943T1 (sl) 2020-10-30
ES2808824T3 (es) 2021-03-02
CA3181696A1 (en) 2015-06-11
PT3077943T (pt) 2020-08-21
EP3077943A2 (en) 2016-10-12
EP3715467A1 (en) 2020-09-30
RS60736B1 (sr) 2020-09-30
AU2014360530B2 (en) 2020-09-03
CY1123264T1 (el) 2021-12-31
PL3077943T3 (pl) 2020-11-30
HRP20201397T1 (hr) 2020-11-27
CA2928209A1 (en) 2015-06-11
CA2928209C (en) 2023-09-26
AU2014360530A1 (en) 2016-04-28
EP3077943B1 (en) 2020-06-03
AU2020277261B2 (en) 2022-11-10
WO2015084985A2 (en) 2015-06-11
US20180274023A1 (en) 2018-09-27
AU2020277261A1 (en) 2021-01-07

Similar Documents

Publication Publication Date Title
LT3077943T (lt) Vaizdo duomenų analizės būdai ir sistemos
HK1220273A1 (zh) 用於數據傳送的系統和方法
HK1200956A1 (en) Data processing system and method
HK1205587A1 (en) Method for processing data and system thereof
HK1206884A1 (en) Method for processing data and system thereof
SG11201600605UA (en) Methods and systems for visualizing data quality
EP2889780A4 (en) DATA PROCESSING SYSTEM AND DATA PROCESSING METHOD
GB201405016D0 (en) Data analysis system and method
HK1205606A1 (en) Method for data interaction and system thereof
SG11201509412WA (en) System and methods for encrypting data
EP2948919A4 (en) SYSTEMS AND METHOD FOR CHANGING THE SIZE OF AN IMAGE
SG11201507814YA (en) Information processing method and system
HK1206458A1 (en) Method for processing data and device thereof
GB201301498D0 (en) System and method for replicating data
GB201502033D0 (en) Methods and systems for analyzing healthcare data
SG11201508780UA (en) Method and system for encrypting data
HK1204687A1 (en) Method for data processing and system thereof
EP3021509A4 (en) METHOD AND DEVICE FOR INFORMATION CONFIGURATION AND DATA RECEPTION
PL2992661T3 (pl) System rejestrowania i zarządzania danymi
EP2963575A4 (en) DEVICE AND METHOD FOR DATA ANALYSIS
EP3051408A4 (en) METHOD AND DEVICE FOR MANAGING DATA
HK1205835A1 (en) Method for data interaction and device thereof
GB201311682D0 (en) Data processing system and method
EP2805301A4 (en) SYSTEMS AND METHODS FOR MANAGING IMAGE DATA
HK1204812A1 (en) Method for data processing and device thereof