GB2457200A - Method and apparatus for modifying output DNA analysis results using an expert system - Google Patents

Method and apparatus for modifying output DNA analysis results using an expert system Download PDF

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Publication number
GB2457200A
GB2457200A GB0910042A GB0910042A GB2457200A GB 2457200 A GB2457200 A GB 2457200A GB 0910042 A GB0910042 A GB 0910042A GB 0910042 A GB0910042 A GB 0910042A GB 2457200 A GB2457200 A GB 2457200A
Authority
GB
United Kingdom
Prior art keywords
analysis results
rule
modified
profile analysis
dna profile
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
GB0910042A
Other versions
GB0910042D0 (en
Inventor
John Douglas Birdwell
Tse-Wei Wang
Dale V Stansberry
Jared Pendleton
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
University of Tennessee Research Foundation
Original Assignee
University of Tennessee Research Foundation
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US11/560,566 external-priority patent/US7640223B2/en
Priority claimed from US11/560,580 external-priority patent/US7624087B2/en
Priority claimed from US11/560,601 external-priority patent/US7664719B2/en
Application filed by University of Tennessee Research Foundation filed Critical University of Tennessee Research Foundation
Publication of GB0910042D0 publication Critical patent/GB0910042D0/en
Publication of GB2457200A publication Critical patent/GB2457200A/en
Withdrawn legal-status Critical Current

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Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/30Data warehousing; Computing architectures
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00ICT programming tools or database systems specially adapted for bioinformatics

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  • Engineering & Computer Science (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Theoretical Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Genetics & Genomics (AREA)
  • Chemical & Material Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Data Mining & Analysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

Displays of a plurality of data comprising DNA profile analysis results wherein a given DNA profile analysis result is based on a decision made by an expert system according to a modifiable rule base comprising peak expert rules. At least one peak expert rule comprises a parameter having a modifiable value and the same or another peak expert rule being selectably enabled. Allele data requiring inspection are highlighted. Input is accepted from a source, wherein the input may cause the DNA profile analysis results to be modified, expanded, accepted, viewed in alternative displays or rejected. The DNA profile analysis results may be modified by re-applying the rule base or applying a modified rule base including a rule having a modified parameter value or a rule being deselected. In response to the input, an updated table is created for output or display, wherein the updated table comprises the modified DNA profile analysis results.
GB0910042A 2006-11-16 2007-11-14 Method and apparatus for modifying output DNA analysis results using an expert system Withdrawn GB2457200A (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US56057606A 2006-11-16 2006-11-16
US11/560,566 US7640223B2 (en) 2006-11-16 2006-11-16 Method of organizing and presenting data in a table using stutter peak rule
US11/560,580 US7624087B2 (en) 2006-11-16 2006-11-16 Method of expert system analysis of DNA electrophoresis data
US11/560,601 US7664719B2 (en) 2006-11-16 2006-11-16 Interaction method with an expert system that utilizes stutter peak rule
PCT/US2007/084656 WO2008067169A2 (en) 2006-11-16 2007-11-14 Method and apparatus for modifying output dna analysis results using an expert system

Publications (2)

Publication Number Publication Date
GB0910042D0 GB0910042D0 (en) 2009-07-22
GB2457200A true GB2457200A (en) 2009-08-12

Family

ID=39471751

Family Applications (1)

Application Number Title Priority Date Filing Date
GB0910042A Withdrawn GB2457200A (en) 2006-11-16 2007-11-14 Method and apparatus for modifying output DNA analysis results using an expert system

Country Status (2)

Country Link
GB (1) GB2457200A (en)
WO (1) WO2008067169A2 (en)

Families Citing this family (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN108351346B (en) * 2015-09-30 2022-04-15 尹特根埃克斯有限公司 Command center
CN106021433B (en) * 2016-05-16 2019-05-10 北京百分点信息科技有限公司 A kind of the public praise analysis method and device of comment on commodity data
WO2019014455A2 (en) * 2017-07-12 2019-01-17 Ande Corporation Pattern recognition system

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6807490B1 (en) * 2000-02-15 2004-10-19 Mark W. Perlin Method for DNA mixture analysis
US20020116135A1 (en) * 2000-07-21 2002-08-22 Pasika Hugh J. Methods, systems, and articles of manufacture for evaluating biological data

Also Published As

Publication number Publication date
WO2008067169A3 (en) 2008-11-13
WO2008067169A9 (en) 2009-05-14
WO2008067169A2 (en) 2008-06-05
GB0910042D0 (en) 2009-07-22

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Legal Events

Date Code Title Description
WAP Application withdrawn, taken to be withdrawn or refused ** after publication under section 16(1)