GB2383452B - A system,method and interface for building biological databases using templates - Google Patents

A system,method and interface for building biological databases using templates

Info

Publication number
GB2383452B
GB2383452B GB0306836A GB0306836A GB2383452B GB 2383452 B GB2383452 B GB 2383452B GB 0306836 A GB0306836 A GB 0306836A GB 0306836 A GB0306836 A GB 0306836A GB 2383452 B GB2383452 B GB 2383452B
Authority
GB
United Kingdom
Prior art keywords
templates
interface
biological databases
building biological
building
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
GB0306836A
Other versions
GB0306836D0 (en
GB2383452A (en
Inventor
Vladimir Brusic
Christian Schonbach
Lie Yong Judice Koh
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Kent Ridge Digital Labs
Original Assignee
Kent Ridge Digital Labs
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Kent Ridge Digital Labs filed Critical Kent Ridge Digital Labs
Publication of GB0306836D0 publication Critical patent/GB0306836D0/en
Publication of GB2383452A publication Critical patent/GB2383452A/en
Application granted granted Critical
Publication of GB2383452B publication Critical patent/GB2383452B/en
Anticipated expiration legal-status Critical
Expired - Fee Related legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/30—Data warehousing; Computing architectures
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00—ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks

Landscapes

  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Theoretical Computer Science (AREA)
  • Evolutionary Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • General Health & Medical Sciences (AREA)
  • Medical Informatics (AREA)
  • Databases & Information Systems (AREA)
  • Bioethics (AREA)
  • Chemical & Material Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
GB0306836A 2000-09-25 2000-09-25 A system,method and interface for building biological databases using templates Expired - Fee Related GB2383452B (en)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/SG2000/000155 WO2002025564A1 (en) 2000-09-25 2000-09-25 A system, method and interface for building biological databases using templates

Publications (3)

Publication Number Publication Date
GB0306836D0 GB0306836D0 (en) 2003-04-30
GB2383452A GB2383452A (en) 2003-06-25
GB2383452B true GB2383452B (en) 2005-03-30

Family

ID=20428867

Family Applications (1)

Application Number Title Priority Date Filing Date
GB0306836A Expired - Fee Related GB2383452B (en) 2000-09-25 2000-09-25 A system,method and interface for building biological databases using templates

Country Status (2)

Country Link
GB (1) GB2383452B (en)
WO (1) WO2002025564A1 (en)

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB2409916A (en) * 2003-07-04 2005-07-13 Intellidos Ltd Joining query templates to query collated data
WO2006136055A1 (en) * 2005-06-22 2006-12-28 Zte Corporation A text data mining method
WO2007001195A1 (en) * 2005-06-27 2007-01-04 Biomatters Limited Methods for the maintenance and analysis of biological data
US9070106B2 (en) * 2008-07-14 2015-06-30 International Business Machines Corporation System and method for dynamic structuring of process annotations

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5692107A (en) * 1994-03-15 1997-11-25 Lockheed Missiles & Space Company, Inc. Method for generating predictive models in a computer system
US5734883A (en) * 1995-04-27 1998-03-31 Michael Umen & Co., Inc. Drug document production system

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5692107A (en) * 1994-03-15 1997-11-25 Lockheed Missiles & Space Company, Inc. Method for generating predictive models in a computer system
US5734883A (en) * 1995-04-27 1998-03-31 Michael Umen & Co., Inc. Drug document production system
US5963967A (en) * 1995-04-27 1999-10-05 Michael Umen & Co., Inc. Drug document production system

Non-Patent Citations (7)

* Cited by examiner, † Cited by third party
Title
CHEN ET AL: "Constructing and maintaining scientific database views in the framework of the object-protocol model" SCIENTIFIC & DBase Manag, 1997 PROC, 9th Int Conf, Olympia WA, USA 11-13 Aug 1997 Los Alamito USA, IEEE COMPUT SOC US. pages 237-248, ISBN:0-8136-7952-2 *
CHEN:"Developing and accessing scientific databases with the OPM data management tool"DATA ENGINEERING,1997,Proceedings. 13th Int Conf. Birmingham UK. 7-11 Apr 1997, Los Alamitos CA, USA, IEEE COMPUT SOC US. Page 580 XP010218583 ISBN:0-8186-7807- *
CHUNG S Y ET AL: "Kleisli: a new tool for data integration in biology" TRENDS IN BIOTECHNOLOGY, ELSEVIER, AMSTERDAM, NL, vol. 17, no. 9, 1 September 1999 (1999-09-01), pages 351-355, XP004179984 ISSN: 0167-7799; *
DAVIDSON S:"BioKleisli:a digital library for biomedical researchers"International Journal On Digital Libraries, Heidleberg DE,Vol 1,no 1,April 1997, pages 36-53, XP002167355, ISSN:1432-5012 cited in the application. *
JASON WANG ET AL: "Pattern Discovery in Biomolecular Data" PATTERN DISCOVERY IN BIOMOLECULAR DATA: TOOLS, TECHNIQUES, AND APPLICATIONS, NEW YORK: OXFORD UNIVERSITY PRESS, US, 1999,page161,165,172,175 XP002168720ISBN:0-19-511940-0 *
PATON ET AL: "Query processing in the TAMBIS bioinformatics source integration system" SCIENTIFIC & Stat DBase Management 1999. 11th INT CONF ON CLEVELAND, OH, USA 28-30JULY 1999, LOS ALAMITOS IEEE COMPUT. SOC pages 138-147,ISBN: 0-7695-0046-3 *
RIECHE ET AL: "A federated DBMS-based integrated environment for molecular biology" Scientific & Stat DBase Management,1994, Proc. 7th Int Conf on, Charlottesville, USA, 28-30 Sept 1994, Los Alamitos USA, IEEE COMPUT SOC US. Pages 118-127, ISBN 0-8186-6610-2 *

Also Published As

Publication number Publication date
GB0306836D0 (en) 2003-04-30
WO2002025564A1 (en) 2002-03-28
GB2383452A (en) 2003-06-25

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Legal Events

Date Code Title Description
732E Amendments to the register in respect of changes of name or changes affecting rights (sect. 32/1977)
PCNP Patent ceased through non-payment of renewal fee

Effective date: 20090925