EP4249500A2 - Peptide entities with antimicrobial activity against multi-drug resistant pathogens - Google Patents
Peptide entities with antimicrobial activity against multi-drug resistant pathogens Download PDFInfo
- Publication number
- EP4249500A2 EP4249500A2 EP21865361.6A EP21865361A EP4249500A2 EP 4249500 A2 EP4249500 A2 EP 4249500A2 EP 21865361 A EP21865361 A EP 21865361A EP 4249500 A2 EP4249500 A2 EP 4249500A2
- Authority
- EP
- European Patent Office
- Prior art keywords
- seq
- group
- peptide
- gram
- pharmaceutical composition
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
- 108090000765 processed proteins & peptides Proteins 0.000 title claims abstract description 87
- 239000003814 drug Substances 0.000 title claims description 10
- 230000000845 anti-microbial effect Effects 0.000 title claims description 8
- 229940079593 drug Drugs 0.000 title description 9
- 244000052769 pathogen Species 0.000 title description 5
- 239000003242 anti bacterial agent Substances 0.000 claims abstract description 27
- 229940088710 antibiotic agent Drugs 0.000 claims abstract description 27
- 238000000034 method Methods 0.000 claims abstract description 23
- 239000008194 pharmaceutical composition Substances 0.000 claims abstract description 13
- 238000002648 combination therapy Methods 0.000 claims abstract description 10
- 208000015181 infectious disease Diseases 0.000 claims description 23
- 241000894006 Bacteria Species 0.000 claims description 19
- 241000191967 Staphylococcus aureus Species 0.000 claims description 13
- 230000000813 microbial effect Effects 0.000 claims description 11
- 241000588626 Acinetobacter baumannii Species 0.000 claims description 9
- 241000194031 Enterococcus faecium Species 0.000 claims description 9
- 229960002260 meropenem Drugs 0.000 claims description 9
- DMJNNHOOLUXYBV-PQTSNVLCSA-N meropenem Chemical compound C=1([C@H](C)[C@@H]2[C@H](C(N2C=1C(O)=O)=O)[C@H](O)C)S[C@@H]1CN[C@H](C(=O)N(C)C)C1 DMJNNHOOLUXYBV-PQTSNVLCSA-N 0.000 claims description 9
- 150000001413 amino acids Chemical group 0.000 claims description 8
- 241000588748 Klebsiella Species 0.000 claims description 7
- 239000003782 beta lactam antibiotic agent Substances 0.000 claims description 7
- 239000002132 β-lactam antibiotic Substances 0.000 claims description 7
- 229940124586 β-lactam antibiotics Drugs 0.000 claims description 7
- 241000192125 Firmicutes Species 0.000 claims description 6
- 239000004480 active ingredient Substances 0.000 claims description 6
- 208000035143 Bacterial infection Diseases 0.000 claims description 5
- 241000588724 Escherichia coli Species 0.000 claims description 5
- 241000589516 Pseudomonas Species 0.000 claims description 5
- 208000022362 bacterial infectious disease Diseases 0.000 claims description 5
- 230000001717 pathogenic effect Effects 0.000 claims description 5
- 230000002265 prevention Effects 0.000 claims description 5
- 239000004475 Arginine Substances 0.000 claims description 4
- KDXKERNSBIXSRK-UHFFFAOYSA-N Lysine Natural products NCCCCC(N)C(O)=O KDXKERNSBIXSRK-UHFFFAOYSA-N 0.000 claims description 4
- ODKSFYDXXFIFQN-UHFFFAOYSA-N arginine Natural products OC(=O)C(N)CCCNC(N)=N ODKSFYDXXFIFQN-UHFFFAOYSA-N 0.000 claims description 4
- 238000011161 development Methods 0.000 claims description 4
- 238000004519 manufacturing process Methods 0.000 claims description 3
- 239000000546 pharmaceutical excipient Substances 0.000 claims description 3
- 239000004472 Lysine Substances 0.000 claims description 2
- YZBQHRLRFGPBSL-RXMQYKEDSA-N carbapenem Chemical compound C1C=CN2C(=O)C[C@H]21 YZBQHRLRFGPBSL-RXMQYKEDSA-N 0.000 claims description 2
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 claims 1
- 235000018417 cysteine Nutrition 0.000 claims 1
- 150000001945 cysteines Chemical class 0.000 claims 1
- 102000004196 processed proteins & peptides Human genes 0.000 abstract description 38
- 230000001580 bacterial effect Effects 0.000 abstract description 21
- 150000001875 compounds Chemical class 0.000 abstract description 8
- 244000005700 microbiome Species 0.000 abstract description 7
- 244000000010 microbial pathogen Species 0.000 abstract description 4
- 239000002158 endotoxin Substances 0.000 description 29
- 229920006008 lipopolysaccharide Polymers 0.000 description 27
- 230000003115 biocidal effect Effects 0.000 description 13
- 230000012010 growth Effects 0.000 description 11
- 238000012360 testing method Methods 0.000 description 11
- 210000004027 cell Anatomy 0.000 description 9
- 238000011156 evaluation Methods 0.000 description 9
- 102000004127 Cytokines Human genes 0.000 description 8
- 108090000695 Cytokines Proteins 0.000 description 8
- 239000012480 LAL reagent Substances 0.000 description 8
- 230000000844 anti-bacterial effect Effects 0.000 description 8
- 239000012528 membrane Substances 0.000 description 7
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 6
- 108700042778 Antimicrobial Peptides Proteins 0.000 description 6
- 102000044503 Antimicrobial Peptides Human genes 0.000 description 6
- 241000588747 Klebsiella pneumoniae Species 0.000 description 6
- MYSWGUAQZAJSOK-UHFFFAOYSA-N ciprofloxacin Chemical compound C12=CC(N3CCNCC3)=C(F)C=C2C(=O)C(C(=O)O)=CN1C1CC1 MYSWGUAQZAJSOK-UHFFFAOYSA-N 0.000 description 6
- 210000003743 erythrocyte Anatomy 0.000 description 6
- 238000000338 in vitro Methods 0.000 description 6
- 230000002401 inhibitory effect Effects 0.000 description 6
- 230000007246 mechanism Effects 0.000 description 6
- 230000003472 neutralizing effect Effects 0.000 description 6
- 241000589517 Pseudomonas aeruginosa Species 0.000 description 5
- 238000009640 blood culture Methods 0.000 description 5
- 230000003833 cell viability Effects 0.000 description 5
- 238000002474 experimental method Methods 0.000 description 5
- 239000000243 solution Substances 0.000 description 5
- 241000238048 Panulirus argus Species 0.000 description 4
- 238000002835 absorbance Methods 0.000 description 4
- 229940041011 carbapenems Drugs 0.000 description 4
- 230000034994 death Effects 0.000 description 4
- 239000003112 inhibitor Substances 0.000 description 4
- 230000002101 lytic effect Effects 0.000 description 4
- 239000000203 mixture Substances 0.000 description 4
- -1 peptidoglycans Polymers 0.000 description 4
- 230000004044 response Effects 0.000 description 4
- 230000001225 therapeutic effect Effects 0.000 description 4
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 3
- 206010018910 Haemolysis Diseases 0.000 description 3
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 3
- 125000003277 amino group Chemical group 0.000 description 3
- 238000003556 assay Methods 0.000 description 3
- 244000052616 bacterial pathogen Species 0.000 description 3
- 230000015572 biosynthetic process Effects 0.000 description 3
- 210000004369 blood Anatomy 0.000 description 3
- 239000008280 blood Substances 0.000 description 3
- 229960003405 ciprofloxacin Drugs 0.000 description 3
- 231100000135 cytotoxicity Toxicity 0.000 description 3
- 230000003013 cytotoxicity Effects 0.000 description 3
- 238000010790 dilution Methods 0.000 description 3
- 239000012895 dilution Substances 0.000 description 3
- 230000000694 effects Effects 0.000 description 3
- 239000001963 growth medium Substances 0.000 description 3
- 210000003677 hemocyte Anatomy 0.000 description 3
- 230000008588 hemolysis Effects 0.000 description 3
- 231100000636 lethal dose Toxicity 0.000 description 3
- 239000002609 medium Substances 0.000 description 3
- 239000012071 phase Substances 0.000 description 3
- 238000012545 processing Methods 0.000 description 3
- 230000000770 proinflammatory effect Effects 0.000 description 3
- 238000000746 purification Methods 0.000 description 3
- 230000009467 reduction Effects 0.000 description 3
- 239000011780 sodium chloride Substances 0.000 description 3
- 230000004083 survival effect Effects 0.000 description 3
- 230000002195 synergetic effect Effects 0.000 description 3
- 231100000331 toxic Toxicity 0.000 description 3
- 230000002588 toxic effect Effects 0.000 description 3
- 208000017667 Chronic Disease Diseases 0.000 description 2
- 229940126062 Compound A Drugs 0.000 description 2
- 241000238424 Crustacea Species 0.000 description 2
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 2
- 108090000790 Enzymes Proteins 0.000 description 2
- 102000004190 Enzymes Human genes 0.000 description 2
- NLDMNSXOCDLTTB-UHFFFAOYSA-N Heterophylliin A Natural products O1C2COC(=O)C3=CC(O)=C(O)C(O)=C3C3=C(O)C(O)=C(O)C=C3C(=O)OC2C(OC(=O)C=2C=C(O)C(O)=C(O)C=2)C(O)C1OC(=O)C1=CC(O)=C(O)C(O)=C1 NLDMNSXOCDLTTB-UHFFFAOYSA-N 0.000 description 2
- 241000238037 Palinurus vulgaris Species 0.000 description 2
- 101800005149 Peptide B Proteins 0.000 description 2
- NQRYJNQNLNOLGT-UHFFFAOYSA-N Piperidine Chemical compound C1CCNCC1 NQRYJNQNLNOLGT-UHFFFAOYSA-N 0.000 description 2
- 108010093965 Polymyxin B Proteins 0.000 description 2
- 239000004743 Polypropylene Substances 0.000 description 2
- 241000700157 Rattus norvegicus Species 0.000 description 2
- 230000009471 action Effects 0.000 description 2
- 230000004913 activation Effects 0.000 description 2
- 239000000654 additive Substances 0.000 description 2
- 230000000996 additive effect Effects 0.000 description 2
- 239000002671 adjuvant Substances 0.000 description 2
- 230000008485 antagonism Effects 0.000 description 2
- 239000004599 antimicrobial Substances 0.000 description 2
- 239000012298 atmosphere Substances 0.000 description 2
- 239000013553 cell monolayer Substances 0.000 description 2
- 238000006243 chemical reaction Methods 0.000 description 2
- 239000003153 chemical reaction reagent Substances 0.000 description 2
- 239000003795 chemical substances by application Substances 0.000 description 2
- 238000007398 colorimetric assay Methods 0.000 description 2
- 238000005859 coupling reaction Methods 0.000 description 2
- 238000002784 cytotoxicity assay Methods 0.000 description 2
- 231100000263 cytotoxicity test Toxicity 0.000 description 2
- 238000010511 deprotection reaction Methods 0.000 description 2
- 238000001514 detection method Methods 0.000 description 2
- 238000009472 formulation Methods 0.000 description 2
- 230000036541 health Effects 0.000 description 2
- 238000011534 incubation Methods 0.000 description 2
- 230000005764 inhibitory process Effects 0.000 description 2
- 230000003993 interaction Effects 0.000 description 2
- 241000238565 lobster Species 0.000 description 2
- 108010091748 peptide A Proteins 0.000 description 2
- 238000010647 peptide synthesis reaction Methods 0.000 description 2
- 229920000024 polymyxin B Polymers 0.000 description 2
- 229960005266 polymyxin b Drugs 0.000 description 2
- 229920001155 polypropylene Polymers 0.000 description 2
- 230000007112 pro inflammatory response Effects 0.000 description 2
- 238000011084 recovery Methods 0.000 description 2
- 239000011347 resin Substances 0.000 description 2
- 229920005989 resin Polymers 0.000 description 2
- 238000004007 reversed phase HPLC Methods 0.000 description 2
- 238000012552 review Methods 0.000 description 2
- 238000000926 separation method Methods 0.000 description 2
- 238000013207 serial dilution Methods 0.000 description 2
- 239000002904 solvent Substances 0.000 description 2
- 125000006850 spacer group Chemical group 0.000 description 2
- 241000894007 species Species 0.000 description 2
- 239000006228 supernatant Substances 0.000 description 2
- 239000000725 suspension Substances 0.000 description 2
- 238000003786 synthesis reaction Methods 0.000 description 2
- 125000003088 (fluoren-9-ylmethoxy)carbonyl group Chemical group 0.000 description 1
- TYMLOMAKGOJONV-UHFFFAOYSA-N 4-nitroaniline Chemical compound NC1=CC=C([N+]([O-])=O)C=C1 TYMLOMAKGOJONV-UHFFFAOYSA-N 0.000 description 1
- QTBSBXVTEAMEQO-UHFFFAOYSA-M Acetate Chemical compound CC([O-])=O QTBSBXVTEAMEQO-UHFFFAOYSA-M 0.000 description 1
- 229920001817 Agar Polymers 0.000 description 1
- 108010050820 Antimicrobial Cationic Peptides Proteins 0.000 description 1
- 102000014133 Antimicrobial Cationic Peptides Human genes 0.000 description 1
- 229920002498 Beta-glucan Polymers 0.000 description 1
- 208000035473 Communicable disease Diseases 0.000 description 1
- 101710129420 Defensin-like peptide Proteins 0.000 description 1
- 108010002069 Defensins Proteins 0.000 description 1
- 102000000541 Defensins Human genes 0.000 description 1
- 206010059866 Drug resistance Diseases 0.000 description 1
- 238000002965 ELISA Methods 0.000 description 1
- 241000588921 Enterobacteriaceae Species 0.000 description 1
- 241000233866 Fungi Species 0.000 description 1
- 102000001554 Hemoglobins Human genes 0.000 description 1
- 108010054147 Hemoglobins Proteins 0.000 description 1
- HTTJABKRGRZYRN-UHFFFAOYSA-N Heparin Chemical compound OC1C(NC(=O)C)C(O)OC(COS(O)(=O)=O)C1OC1C(OS(O)(=O)=O)C(O)C(OC2C(C(OS(O)(=O)=O)C(OC3C(C(O)C(O)C(O3)C(O)=O)OS(O)(=O)=O)C(CO)O2)NS(O)(=O)=O)C(C(O)=O)O1 HTTJABKRGRZYRN-UHFFFAOYSA-N 0.000 description 1
- 241000282412 Homo Species 0.000 description 1
- DGAQECJNVWCQMB-PUAWFVPOSA-M Ilexoside XXIX Chemical compound C[C@@H]1CC[C@@]2(CC[C@@]3(C(=CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H](C5(C)C)OS(=O)(=O)[O-])C)C)[C@@H]2[C@]1(C)O)C)C(=O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O.[Na+] DGAQECJNVWCQMB-PUAWFVPOSA-M 0.000 description 1
- 238000011050 LAL assay Methods 0.000 description 1
- 239000006142 Luria-Bertani Agar Substances 0.000 description 1
- 241001465754 Metazoa Species 0.000 description 1
- RJQXTJLFIWVMTO-TYNCELHUSA-N Methicillin Chemical compound COC1=CC=CC(OC)=C1C(=O)N[C@@H]1C(=O)N2[C@@H](C(O)=O)C(C)(C)S[C@@H]21 RJQXTJLFIWVMTO-TYNCELHUSA-N 0.000 description 1
- 241000699670 Mus sp. Species 0.000 description 1
- 206010028980 Neoplasm Diseases 0.000 description 1
- 208000031662 Noncommunicable disease Diseases 0.000 description 1
- 101710123367 Panulirin Proteins 0.000 description 1
- 241000238040 Panulirus Species 0.000 description 1
- 101710189302 Panusin Proteins 0.000 description 1
- 206010034133 Pathogen resistance Diseases 0.000 description 1
- 239000004793 Polystyrene Substances 0.000 description 1
- 229940123361 Quorum sensing inhibitor Drugs 0.000 description 1
- 239000012980 RPMI-1640 medium Substances 0.000 description 1
- 239000006146 Roswell Park Memorial Institute medium Substances 0.000 description 1
- DTQVDTLACAAQTR-UHFFFAOYSA-N Trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 1
- 229920004890 Triton X-100 Polymers 0.000 description 1
- 239000013504 Triton X-100 Substances 0.000 description 1
- 229940122618 Trypsin inhibitor Drugs 0.000 description 1
- 101710162629 Trypsin inhibitor Proteins 0.000 description 1
- 108010059993 Vancomycin Proteins 0.000 description 1
- 241000251539 Vertebrata <Metazoa> Species 0.000 description 1
- KPFBUSLHFFWMAI-HYRPPVSQSA-N [(8r,9s,10r,13s,14s,17r)-17-acetyl-6-formyl-3-methoxy-10,13-dimethyl-1,2,7,8,9,11,12,14,15,16-decahydrocyclopenta[a]phenanthren-17-yl] acetate Chemical compound C1C[C@@H]2[C@](CCC(OC)=C3)(C)C3=C(C=O)C[C@H]2[C@@H]2CC[C@](OC(C)=O)(C(C)=O)[C@]21C KPFBUSLHFFWMAI-HYRPPVSQSA-N 0.000 description 1
- 230000003213 activating effect Effects 0.000 description 1
- 239000008272 agar Substances 0.000 description 1
- 238000013019 agitation Methods 0.000 description 1
- 238000000540 analysis of variance Methods 0.000 description 1
- 238000004458 analytical method Methods 0.000 description 1
- 238000011861 anti-inflammatory therapy Methods 0.000 description 1
- 229960005475 antiinfective agent Drugs 0.000 description 1
- 208000006673 asthma Diseases 0.000 description 1
- 108050002883 beta-defensin Proteins 0.000 description 1
- 102000012265 beta-defensin Human genes 0.000 description 1
- 210000004899 c-terminal region Anatomy 0.000 description 1
- XQPRBTXUXXVTKB-UHFFFAOYSA-M caesium iodide Chemical compound [I-].[Cs+] XQPRBTXUXXVTKB-UHFFFAOYSA-M 0.000 description 1
- 201000011510 cancer Diseases 0.000 description 1
- 238000004113 cell culture Methods 0.000 description 1
- 230000010261 cell growth Effects 0.000 description 1
- 230000006037 cell lysis Effects 0.000 description 1
- 210000000170 cell membrane Anatomy 0.000 description 1
- 238000001516 cell proliferation assay Methods 0.000 description 1
- 230000001413 cellular effect Effects 0.000 description 1
- 230000006364 cellular survival Effects 0.000 description 1
- 239000003593 chromogenic compound Substances 0.000 description 1
- 238000001360 collision-induced dissociation Methods 0.000 description 1
- 230000008878 coupling Effects 0.000 description 1
- 238000010168 coupling process Methods 0.000 description 1
- 210000000172 cytosol Anatomy 0.000 description 1
- 231100000433 cytotoxic Toxicity 0.000 description 1
- 230000001472 cytotoxic effect Effects 0.000 description 1
- 238000013461 design Methods 0.000 description 1
- 230000001687 destabilization Effects 0.000 description 1
- 206010012601 diabetes mellitus Diseases 0.000 description 1
- 229940042399 direct acting antivirals protease inhibitors Drugs 0.000 description 1
- 201000010099 disease Diseases 0.000 description 1
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 description 1
- 231100000673 dose–response relationship Toxicity 0.000 description 1
- 239000003596 drug target Substances 0.000 description 1
- 238000000119 electrospray ionisation mass spectrum Methods 0.000 description 1
- 238000002101 electrospray ionisation tandem mass spectrometry Methods 0.000 description 1
- 230000002255 enzymatic effect Effects 0.000 description 1
- 230000009036 growth inhibition Effects 0.000 description 1
- 239000003966 growth inhibitor Substances 0.000 description 1
- 230000005802 health problem Effects 0.000 description 1
- 229940000351 hemocyte Drugs 0.000 description 1
- 210000000087 hemolymph Anatomy 0.000 description 1
- 230000002949 hemolytic effect Effects 0.000 description 1
- 229960002897 heparin Drugs 0.000 description 1
- 229920000669 heparin Polymers 0.000 description 1
- 230000007062 hydrolysis Effects 0.000 description 1
- 238000006460 hydrolysis reaction Methods 0.000 description 1
- 239000000411 inducer Substances 0.000 description 1
- 238000011081 inoculation Methods 0.000 description 1
- 239000002054 inoculum Substances 0.000 description 1
- 230000003834 intracellular effect Effects 0.000 description 1
- 230000001665 lethal effect Effects 0.000 description 1
- 239000007788 liquid Substances 0.000 description 1
- 238000001819 mass spectrum Methods 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 230000010534 mechanism of action Effects 0.000 description 1
- 230000001404 mediated effect Effects 0.000 description 1
- 230000028161 membrane depolarization Effects 0.000 description 1
- 230000037353 metabolic pathway Effects 0.000 description 1
- 229960003085 meticillin Drugs 0.000 description 1
- 239000006994 mh medium Substances 0.000 description 1
- 239000010445 mica Substances 0.000 description 1
- 229910052618 mica group Inorganic materials 0.000 description 1
- 230000002438 mitochondrial effect Effects 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 210000001616 monocyte Anatomy 0.000 description 1
- 230000004660 morphological change Effects 0.000 description 1
- 230000007935 neutral effect Effects 0.000 description 1
- FEMOMIGRRWSMCU-UHFFFAOYSA-N ninhydrin Chemical compound C1=CC=C2C(=O)C(O)(O)C(=O)C2=C1 FEMOMIGRRWSMCU-UHFFFAOYSA-N 0.000 description 1
- 231100000252 nontoxic Toxicity 0.000 description 1
- 230000003000 nontoxic effect Effects 0.000 description 1
- 108020004707 nucleic acids Proteins 0.000 description 1
- 102000039446 nucleic acids Human genes 0.000 description 1
- 150000007523 nucleic acids Chemical class 0.000 description 1
- 229920002113 octoxynol Polymers 0.000 description 1
- 230000003287 optical effect Effects 0.000 description 1
- 210000000056 organ Anatomy 0.000 description 1
- 230000008520 organization Effects 0.000 description 1
- 239000008188 pellet Substances 0.000 description 1
- 239000000137 peptide hydrolase inhibitor Substances 0.000 description 1
- 239000008363 phosphate buffer Substances 0.000 description 1
- 229920002223 polystyrene Polymers 0.000 description 1
- 239000011148 porous material Substances 0.000 description 1
- 239000002244 precipitate Substances 0.000 description 1
- 238000003825 pressing Methods 0.000 description 1
- 108010069727 pro-phenoloxidase Proteins 0.000 description 1
- 239000000047 product Substances 0.000 description 1
- 230000035755 proliferation Effects 0.000 description 1
- 125000006239 protecting group Chemical group 0.000 description 1
- 230000005180 public health Effects 0.000 description 1
- 230000001698 pyrogenic effect Effects 0.000 description 1
- 230000008707 rearrangement Effects 0.000 description 1
- 230000010076 replication Effects 0.000 description 1
- 238000011160 research Methods 0.000 description 1
- 230000008261 resistance mechanism Effects 0.000 description 1
- 206010039073 rheumatoid arthritis Diseases 0.000 description 1
- 235000015170 shellfish Nutrition 0.000 description 1
- 229910052708 sodium Inorganic materials 0.000 description 1
- 239000011734 sodium Substances 0.000 description 1
- 239000007790 solid phase Substances 0.000 description 1
- 238000010532 solid phase synthesis reaction Methods 0.000 description 1
- 239000011550 stock solution Substances 0.000 description 1
- 238000006467 substitution reaction Methods 0.000 description 1
- 239000000758 substrate Substances 0.000 description 1
- 230000008685 targeting Effects 0.000 description 1
- 229940124598 therapeutic candidate Drugs 0.000 description 1
- 230000036962 time dependent Effects 0.000 description 1
- 231100000419 toxicity Toxicity 0.000 description 1
- 230000001988 toxicity Effects 0.000 description 1
- 239000003053 toxin Substances 0.000 description 1
- 231100000765 toxin Toxicity 0.000 description 1
- 108700012359 toxins Proteins 0.000 description 1
- 230000005945 translocation Effects 0.000 description 1
- 125000002221 trityl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1C([*])(C1=C(C(=C(C(=C1[H])[H])[H])[H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 1
- 239000002753 trypsin inhibitor Substances 0.000 description 1
- 238000003828 vacuum filtration Methods 0.000 description 1
- 229960003165 vancomycin Drugs 0.000 description 1
- MYPYJXKWCTUITO-LYRMYLQWSA-N vancomycin Chemical compound O([C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1OC1=C2C=C3C=C1OC1=CC=C(C=C1Cl)[C@@H](O)[C@H](C(N[C@@H](CC(N)=O)C(=O)N[C@H]3C(=O)N[C@H]1C(=O)N[C@H](C(N[C@@H](C3=CC(O)=CC(O)=C3C=3C(O)=CC=C1C=3)C(O)=O)=O)[C@H](O)C1=CC=C(C(=C1)Cl)O2)=O)NC(=O)[C@@H](CC(C)C)NC)[C@H]1C[C@](C)(N)[C@H](O)[C@H](C)O1 MYPYJXKWCTUITO-LYRMYLQWSA-N 0.000 description 1
- MYPYJXKWCTUITO-UHFFFAOYSA-N vancomycin Natural products O1C(C(=C2)Cl)=CC=C2C(O)C(C(NC(C2=CC(O)=CC(O)=C2C=2C(O)=CC=C3C=2)C(O)=O)=O)NC(=O)C3NC(=O)C2NC(=O)C(CC(N)=O)NC(=O)C(NC(=O)C(CC(C)C)NC)C(O)C(C=C3Cl)=CC=C3OC3=CC2=CC1=C3OC1OC(CO)C(O)C(O)C1OC1CC(C)(N)C(O)C(C)O1 MYPYJXKWCTUITO-UHFFFAOYSA-N 0.000 description 1
- 238000005406 washing Methods 0.000 description 1
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 1
Images
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/43504—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from invertebrates
- C07K14/43509—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from invertebrates from crustaceans
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/40—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with one nitrogen as the only ring hetero atom, e.g. sulpiride, succinimide, tolmetin, buflomedil
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/40—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with one nitrogen as the only ring hetero atom, e.g. sulpiride, succinimide, tolmetin, buflomedil
- A61K31/407—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with one nitrogen as the only ring hetero atom, e.g. sulpiride, succinimide, tolmetin, buflomedil condensed with other heterocyclic ring systems, e.g. ketorolac, physostigmine
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
- A61K38/16—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- A61K38/17—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- A61K38/1767—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from invertebrates
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K45/00—Medicinal preparations containing active ingredients not provided for in groups A61K31/00 - A61K41/00
- A61K45/06—Mixtures of active ingredients without chemical characterisation, e.g. antiphlogistics and cardiaca
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/04—Antibacterial agents
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
Definitions
- the present invention relates to new peptide entities, combinations, and pharmaceutical compositions comprising them; as well as their use in the manufacture of medicines and in methods of treating bacterial infections.
- Antibiotic resistance occurs when germs like bacteria and fungi develop the ability to defeat or circumvent drugs designed to kill them. That means that the germs do not die and continue to grow. Infections caused by germs resistant to antibiotics are difficult and sometimes impossible, to treat. If we add to this that in most cases antibiotic-resistant infections require long hospital stays, additional medical follow-up visits, and expensive and toxic treatment alternatives, the complexity of the problem is even greater. Antibiotic resistance does not mean that the body is becoming resistant to antibiotics as occurs in resistance phenomena in other diseases; rather, the bacteria have become resistant to antibiotics designed to kill them. This problem is not solved by increasing the dose of antibiotics to be administered, which also represents an added risk of toxicity.
- Antibiotic resistance is capable of affecting people at any stage of life, as well as the health, veterinary and agricultural industries, making it one of the most serious and urgent health problems in the world. Although the risk of resistant infections cannot be completely avoided, some people are at higher risk than others, for example, those with chronic diseases. If antibiotics lose their effectiveness, we lose the ability to treat infections and control threats to public health (https://www.cdc.gov/drugresistance/intl-activities/amr-challenge.html).
- clinicians also rely on the ability to prevent infections through the use of antibiotics, for example in joint replacements, organ transplants, antiinflammatory therapy, cancer and in the treatment of chronic diseases such as diabetes, asthma, and rheumatoid arthritis.
- microorganisms that are reported with the highest incidence of antibiotic resistance are Acinetobacter baumannii sp, resistant to carbapenems, Pseudomonas aeruginosa sp, resistant to carbapenems and Enterobacteriaceae spp, resistant to carbapenems and producing ESBL.
- other microorganisms with an intermediate incidence are mentioned, such as Enterococcus faecium sp, resistant to vancomycin, and Staphylococcus aureus sp, resistant to methicillin.
- AMPs antimicrobial peptides
- the membrane lytic mechanism of natural AMPs is a potentially promising therapeutic alternative because resistance mechanisms rapidly emerge to specific drug targets [ Mourtado, R., et al., Design of stapled antimicrobial peptides that are stable, non-toxic and kill antibiotic-resistant bacteria in mice. Nature Biotechnology, 2019. 37 (10): p. 1186-1197 ].
- the need for new external anti-infective agents is more urgent to combat infectious diseases, and specifically, those unresolved and/or caused by multi-drug-resistant microorganisms.
- AMPs are selective towards negatively charged bacterial membranes such as bacteria, and their cytotoxicity is moderate towards eukaryotic organisms which present a neutral charge in their surface.
- a distinctive element in the antibacterial mechanism of AMPs is their interaction with the cytoplasmic membrane, therefore charge and hydrophobicity are key properties for the development of the antimicrobial activity.
- the mechanism of action generally involves the formation of lytic pores or destabilization of the membrane by the formation of peptide aggregates.
- Other non-lytic mechanisms include cell depolarization, and translocation to the cytosol, and binding to intracellular targets (nucleic acids, enzymes, etc.) [ Hale, J.D. and R.E. Hancock, Alternative mechanisms of action of cationic antimicrobial peptides on bacteria. Expert Rev Anti Infect Ther, 2007. 5 (6): p. 951-9 .].
- the present invention provides synthetic peptide sequences from the group comprising the sequences SEQ ID NO. 1, SEQ ID NO. 2, and SEQ ID NO. 3 with potential therapeutic applications in the prevention and treatment of microbial infections caused by multi-drug resistant bacteria.
- the invention further provides a combination therapy to a patient with a bacterial infection to control the development of the multi-resistance phenomenon, which comprises the administration to the patient of at least 2 sequences selected from the group comprising SEQ ID NO. 1-3. And it also provides a combination therapy comprising the administration to the patient of a sequence selected from the group comprising SEQ ID NO. 1-3 with a beta-lactam antibiotic. And more specifically it provides this combination therapy where the beta-lactam antibiotic class are carbapenems.
- Another object of the present invention is a pharmaceutical composition
- a pharmaceutical composition comprising a peptide selected from the group consisting of SEQ ID NO. 1-3 as an active ingredient and one or more pharmaceutically acceptable excipients.
- Another object of the invention is a pharmaceutical composition that further comprises a second peptide selected from the group consisting of SEQ ID NO. 1-3 as an active ingredient.
- Another object of the invention is a pharmaceutical composition comprising a peptide selected from the group consisting of SEQ ID NO. 1-3 and also a beta-lactam antibiotic. A particular embodiment of this object is where the antibiotic is meropenem.
- the peptides described in the present invention can be used for the manufacture of drugs for the treatment of bacterial infections.
- a distinctive aspect of the present invention is its use in the treatment of infections caused particularly by Gram-negative bacteria.
- Particular forms of carrying out the invention are its therapeutic use in the treatment of infections caused by pathogenic strains belonging to the ESKAPE group, for example, Klebsiella pneumoneae sp, Acinetobacter baumannii sp, Pseudomona aeruginosa sp. and Escherichia coli sp, and more specifically, in clinical isolates of said species multi-resistant to conventional antibiotics.
- Another particular aspect of the present invention is its use in the treatment of infections caused by Gram-positive bacteria.
- Particular forms of carrying out the invention would be its use in the treatment of infections caused by pathogenic strains selected from the group of Enterococcus faecium sp or Staphylococcus aureus sp, and more specifically, in clinical isolates of said species multi-resistant to conventional antibiotics.
- Another object of the present invention is a method of treatment or preventing of a microbial infection that comprises the administration of a peptide selected from the group consisting of SEQ ID No. 1-3, of any of the combinations or the pharmaceutical compositions.
- a particular embodiment is where the infection is caused by a pathogenic strain belonging to the ESKAPE group.
- the present invention provides an alternative based on new synthetic peptide compounds that combat pathogenic microorganisms of a bacterial nature, and that appears as multiresistant microorganisms to conventional antibiotics.
- the chimeric hybrid structures designed from different families of natural peptides identified in the hemocytes of the lobster P. argus show antimicrobial activity against multiresistant antibiotic strains that include Enterococcus faecium sp., Staphylococcus aureus sp., Klebsiella pneumoneae sp., Acinetobacter baumannii sp., Pseudomonas aeruginosa sp. and Eccherichia coli sp.
- the list of amino acid sequences that are selected from the group consisting of the sequences SEQ ID NO is shown. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3, or a peptide structure with at least 80% identity with SEQ ID NO. 1-3 is shown.
- the selected sequences comprised in the group SEQ ID NO. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3 are obtained by chemical synthesis using the solid phase peptide synthesis (SPPS) methodology. That said, in the primary structure of these sequences there are at least 6 basic amino acids corresponding to arginine or lysine that can occur in their L or D forms, and in a preferred embodiment the sequences obtained must contain at least four residues of arginine.
- SPPS solid phase peptide synthesis
- the present invention describes a combination therapy that includes at least one of the selected sequences comprised in the group SEQ ID NO. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3.
- the peptides can be found in the same formulation or in different formulations that can be administered concomitantly or sequentially.
- the present invention provides a pharmaceutical composition
- a pharmaceutical composition comprising at least one synthetic peptide selected from the group consisting of SEQ ID NO. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3 as an active ingredient and one or more pharmaceutically acceptable excipients.
- the present invention provides the use of the sequences SEQ ID NO. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3 in the prevention and/or treatment of microbial infections in a subject.
- the peptide sequences of the present invention are broad-spectrum antibacterial because they have a lytic effect on Gram-negative and Gram-positive bacterial strains, which cause infections in humans and/or animals.
- the present invention provides the use of said peptide sequences SEQ ID NO. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3 are inhibitors of bacterial growth and with bactericidal activity against selected pathogenic microorganisms from the group Enterococcus faecium sp, Staphylococcus aureus sp, Klebsiella pneumoneae sp, Acinetobacter baumannii sp, Pseudomonas aeruginosa sp and Eccherichia coli sp.
- the present invention provides the use of peptide sequences SEQ ID NO. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3 as growth inhibitors of multi-resistant pathogenic microorganisms such as Enterococcus faecium sp, Staphylococcus aureus sp, Klebsiella pneumoneae sp, Acinetobacter baumannii sp, Pseudomonas aeruginosa sp, and Eccherichia coli sp. Consequently, all antibiotic multi-resistant microorganisms were sensitive to peptide compounds, presenting CL 90 values between 1.0 -8.0 ⁇ M in the kinetic microdilution method.
- multi-resistant pathogenic microorganisms such as Enterococcus faecium sp, Staphylococcus aureus sp, Klebsiella pneumoneae sp, Acinetobacter baumannii sp, Pseudom
- the present invention provides the use of peptide sequences SEQ ID NO. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3 to obtain a 3-log decrease in the initial bacterial load in times less than 30 minutes. It is a fact that these provide rapidity to achieve the reduction of the bacterial load compared to the antibiotics meropenem and ciprofloxacin against the selected bacteria Klebsiella pneumoniae (ATCC 1003) and Pseudomona aeruginosa (ATCC 9027).
- the peptide sequences SEQ ID NO. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3 show neutralizing activity of lipopolysaccharide or LPS, the main and toxic component of the outer membrane of Gram-negative bacteria.
- the peptide sequences inhibit LPS-induced pro-inflammatory cytokine release in whole blood culture and inhibit the LPS response to the LAL (Limulus amebocyte lysate) reagent.
- the invention further provides an embodiment that exemplifies the synergistic antibacterial effect obtained from the combinations of SEQ ID NO. 1- SEQ ID NO. 2; SEQ ID NO. 1- SEQ ID NO. 3 and SEQ ID NO. 2- SEQ ID NO. 3 in an in vitro culture of multi-antibiotic resistant strains of Klebsiella pneumoniae sp and Staphylococcus aureus sp from clinical isolates.
- the present invention further provides a method of treatment of a subject diagnosed with a microbial infection, which comprises the administration of a therapeutically effective amount of one of the peptides selected from the group formed by SEQ ID NO. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3.
- said infection is an infection caused by Gram-negative and Gram-positive bacteria multi-resistant to conventional antibiotics.
- the present invention further provides that said treatment method guarantees a faster antibacterial response when the selected peptides of the sequences SEQ ID NO are combined. 1; SEQ ID NO. 2; and/or SEQ ID NO. 3, with the carbapenem antibiotic in an in vitro culture of Klebsiella pneumoniae sp and Staphylococcus aureus sp strains from the clinic.
- a hoe was seeded in Mueller-Hinton liquid medium (MH) and allowed to grow at 37 °C. with orbital shaking at 180 rpm overnight. Subsequently, a working culture was prepared by inoculating 100 ⁇ L of growth in 5 mL of MH and incubated at 37oC for 2 or 3 hours. Growth stopped when the culture reached an optical density (OD) at 650nm between 0.45 and 0.55.
- MH Mueller-Hinton liquid medium
- the culture is considered to be at a concentration of 108 CFU/mL
- the bacterial suspension was diluted to 10 6 CFU/mL in Phosphate Buffer Saline (PBS), which was used as a working culture.
- PBS Phosphate Buffer Saline
- the peptides were dissolved in sterile PB to the desired concentration, and 50 ⁇ L was applied to a sterile 96-well polypropylene plate (Eppendorf, Germany).
- Table 1 Values expressed in lethal concentration of 90% of the bacterial culture (LC 90 ) of SEQ ID NO. 1, SEQ ID NO. 2 and SEQ ID NO. 3 on multi-resistant strains (from the ESKAPE group) from clinical isolates. The values represent the range of concentrations obtained from independent experiments.
- MDR clinical isolated LC 90 ⁇ M Gram-negative Gram-positive Peptides K. pneumoniae E. coli P. aeruginosa A. baumannii S . aureus E. faecium SEQ ID NO. 1 2-8 1-4 2-8 2-8 1-4 4-8 SEQ. ID. NO. 2 1-4 1-4 1-4 2-8 1-4 2-8 SEQ. ID. NO. 3 2-8 1-4 1-4 4-8 2-8 4-8 4-8;
- the hemolytic activity of the peptides was evaluated on Wistar rat erythrocytes.
- the drawn blood was supplemented with heparin in a collecting device (Monovette, Sarstedt, Germany).
- the blood was centrifuged at 1000 ⁇ g for 10 minutes at 25 °C (Hettich, Germany), and the erythrocyte pellet was washed three successively with sterile saline.
- Plasma-free erythrocytes were diluted in saline to a final concentration of 4% (v / v).
- % H The percentage of hemolysis (% H) was calculated according to Equation 1, from two independent replications, where H 0% and H 100% correspond to the Abs540nm for the controls with PBS and Triton X-100, respectively, and H peptide at the value of Abs540nm obtained for each peptide concentration.
- % H H peptide ⁇ H 0 % H 100 % ⁇ H 0 %
- the cytotoxic effect of the peptides represented by SEQ ID NO.1-3 in Hep2 cells was determined.
- 96-well plates seeded after 48 hours with a completely confluent cell monolayer (1 ⁇ 10 5 cells/well) were used.
- the growth medium was removed from the plates and 100 ⁇ L of peptides dissolved in culture medium without SFBI were added per well at different concentrations from 6.25 ⁇ M to 100 ⁇ M.
- Six wells were used per concentration of the peptide to be evaluated, and in the remaining wells (6) 100 ⁇ L of culture medium without SFBI were added, the latter constituted the cellular control.
- the plates were incubated at 37 °C, in a 5% CO 2 atmosphere for 72 hours, and were observed daily to determine possible morphological changes in the cell monolayer indicative of cytotoxicity. After this time, cell viability was determined in all wells using the colorimetric assay based on the reduction of the MTT compound by active mitochondrial enzymes in living cells [ Mosmann, T., Rapid colorimetric assay for cellular growth and survival: application to proliferation and cytotoxicity assays. J Immunol Methods, 1983. 65 (1-2): p. 55-63 ] 10 ⁇ L of the MTT solution at a concentration of 5 mg/mL in PBS was added to each well.
- AbsCT mean absorbance value of the cell cultures treated with the peptides. AbsCC: mean absorbance value of the cell controls considered as 100% cell viability. The assay was performed in duplicate for each peptide concentration. The figure shows the two variants of in vitro cytotoxicity assays of the peptides represented by SEQ ID NO. 1, SEQ ID NO. 2 and SEQ. ID. NO. 3.
- This method is based on the determination of the time needed by the peptides represented by SEQ ID NO. 1, SEQ ID NO. 2 and SEQ. ID. NO. 3, and the antibiotics meropenem and ciprofloxacin, to achieve at least a 3-log (1000-fold) decrease in initial bacterial concentration CFUs.
- Time-dependent death was evaluated against P. aeruginosa (ATCC 9027) and K. pneumoniae (ATCC 1003) bacterial strains as described in the literature [12], with minor modifications.
- Working cultures of bacteria (1 ⁇ 105 CFU/mL) were exposed to all antimicrobials at the concentration of 2 ⁇ the MIC shown for the strain to be tested, in a final volume of 1 ml (v/v).
- the inoculum in PBS (pH 7.4) without any antimicrobial was considered as a control.
- all suspensions were incubated at 37 °C.
- 100 ⁇ l aliquots of the culture were removed at different predetermined times (5, 10, 15, 20, 30, 60, 90, and 120 min), which were diluted 100 ⁇ in sterile PBS and spread on Mueller-Hinton agar plates. Plates were incubated for 24 hours at 37 ° C, and cell survival was determined by counting total colonies.
- CFU versus time curves was constructed for each peptide compound and compared with the reference antibiotics. Bacteria death time is shorter for designed sequences than for conventional antibiotics used as susceptibility control for Gram-negative strains.
- This method is based on the determination of pro-inflammatory cytokines released in a whole blood culture induced by agents that generate a pro-inflammatory response.
- LPS was used as the main inducer of the pro-inflammatory response.
- SEQ ID NO. 1 SEQ ID NO. 2 and SEQ. ID. NO. 3
- the release of IL-6 cytokine was determined by an ELISA.
- a whole blood culture was incubated in RPMI-1640 medium (Sigma, USA) with a series of dilutions of the peptides covering 0.05-50 nM in the presence and absence of fixed concentrations of LPS at 0.25 EU.
- the designed sequences show an inhibitory activity of the expression of pro-inflammatory cytokines (IL-6) mediated by LPS in a whole blood culture.
- IL-6 pro-inflammatory cytokines
- the neutralizing activity of the peptides is represented by SEQ ID NO. 1, SEQ ID NO. 2 and SEQ. ID. NO. 3 on bacterial endotoxins (LPS) using the LAL kinetic chromogenic assay (PYROCHROME ® ; ACC, USA). All pyrogen-free materials supplied by ACC, USA were used to carry out the test. The test conditions followed the manufacturer's instructions.
- the peptides to be evaluated were tested in a series of 1:10 dilutions (v / v) from an initial concentration of 20 ⁇ M with a constant endotoxin challenge (LPS) of 0.5 EU / ml.
- the different peptide concentrations plus the LPS challenge were incubated in a non-pyrogenic microplate (ACC, USA) at 37 °C for 5 minutes. Subsequently, the LAL reagent was added and the reaction kinetics were measured at 450 nm for 1 hour with 15-second intervals at 37 oC in a microplate spectrophotometer. The appearance of a yellow coloration was due to the release of p-nitroaniline from the chromogenic substrate included in the LAL, which is only hydrolyzed with the presence of free LPS in the sample, which activates the enzymatic cascade that leads to hydrolysis of the substrate. Using the KC4 software, the percentages of LPS recovery were obtained, which translates into the amount of free or active LPS that is not neutralized or sequestered by the evaluated peptides.
- FICI fractional inhibitory concentration index
- MIC A minimum inhibitory concentration of compound A
- MIC B minimum inhibitory concentration of compound B
- MIC AB minimum concentration of A that combined with B inhibits growth
- MIC BA minimum concentration of B that combined with A inhibits growth.
- Peptide A was arranged in the columns (2-11) and peptide B in the rows of the plate (B-F). In this way, 60 internal wells of the plate were used for combinations of peptide concentrations between peptide A (0.25-16 ⁇ M) and peptide B (0.075-16 ⁇ M). The first column and the last row corresponded to the concentrations of the uncombined A and B peptides, respectively.
- 50 ⁇ L of PBS was added to all the wells of the columns and external rows of the plate. Subsequently, 50 ⁇ L of the working bacterial culture were added to all wells and the plate was incubated at 37°C for 2 h.
- MHB double-concentrated MH broth
- microbial growth was followed kinetically by measuring OD at 650 nm for 15 hours at 37 ° C, recording OD values at 5 min intervals on a plate spectrophotometer (BioTek Instruments, USA).
- Bacterial growth inhibition (MIC) values were taken as values similar to the blanks (controls) of MHB medium incubated in the outermost wells of the plate. The following table shows the mean of the results obtained in three independent experiments.
- the checkerboard method was used to evaluate the synergy between Meropenem and the peptides represented by SEQ. ID: NO. 1, SEQ. ID: NO. 2 and SEQ. ID: NO. 3 against multi-resistant bacteria Klebsiella pneumoneae and Staphylococcus aureus from clinical isolates.
- the checkerboard method procedure used is similar to that described in Example 7. In this case, meropenem was tested as compound A and the peptides as compound B. The results shown in Table 3 are based on the determination of the Index.
- FICI fractional inhibitory concentration
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Medicinal Chemistry (AREA)
- General Health & Medical Sciences (AREA)
- Organic Chemistry (AREA)
- Animal Behavior & Ethology (AREA)
- Public Health (AREA)
- Veterinary Medicine (AREA)
- Pharmacology & Pharmacy (AREA)
- Epidemiology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Gastroenterology & Hepatology (AREA)
- Zoology (AREA)
- Insects & Arthropods (AREA)
- Biochemistry (AREA)
- Molecular Biology (AREA)
- Tropical Medicine & Parasitology (AREA)
- Toxicology (AREA)
- Genetics & Genomics (AREA)
- Biophysics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Oncology (AREA)
- Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
- General Chemical & Material Sciences (AREA)
- Communicable Diseases (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Immunology (AREA)
- Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
- Peptides Or Proteins (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CU2020000086A CU20200086A7 (es) | 2020-11-19 | 2020-11-19 | Entidades peptídicas con actividad antimicrobiana frente a patógenos multi-drogoresistentes |
PCT/CU2021/050011 WO2022105948A2 (es) | 2020-11-19 | 2021-11-18 | Entidades peptídicas con actividad antimicrobiana frente a patógenos multi-drogoresistentes |
Publications (1)
Publication Number | Publication Date |
---|---|
EP4249500A2 true EP4249500A2 (en) | 2023-09-27 |
Family
ID=80684162
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
EP21865361.6A Pending EP4249500A2 (en) | 2020-11-19 | 2021-11-18 | Peptide entities with antimicrobial activity against multi-drug resistant pathogens |
Country Status (9)
Country | Link |
---|---|
US (1) | US20240239849A1 (es) |
EP (1) | EP4249500A2 (es) |
JP (1) | JP2024508205A (es) |
CN (1) | CN116406282A (es) |
CA (1) | CA3199519A1 (es) |
CO (1) | CO2023007878A2 (es) |
CU (1) | CU20200086A7 (es) |
MX (1) | MX2023005925A (es) |
WO (1) | WO2022105948A2 (es) |
Families Citing this family (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN117756904B (zh) * | 2023-12-22 | 2024-05-24 | 潍坊医学院 | 一种订书肽及其应用 |
Family Cites Families (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
JP3860838B2 (ja) * | 1995-08-23 | 2006-12-20 | ユニバーシティー オブ ブリティッシュ コロンビア | 抗微生物性陽イオン性ペプチドおよびそのスクリーニング方法 |
CU24073B1 (es) | 2011-12-27 | 2015-01-29 | Ct De Investigación Y Desarrollo De Medicamentos Cidem | COMPOSICIÓN A PARTIR DE EXTRACTO DE HEMOCITOS DE LANGOSTA PARA LA DETECCIÓN DE LIPOPOLISACÁRIDOS, PEPTIDOGLICANOS Y 1,3-ß-D-GLUCANOS |
CA3062852A1 (en) * | 2017-05-11 | 2018-11-15 | Los Angeles Biomedical Research Institute At Harbor-Ucla Medical Center | Antimicrobial peptides with alpha-core helices |
-
2020
- 2020-11-19 CU CU2020000086A patent/CU20200086A7/es unknown
-
2021
- 2021-11-18 MX MX2023005925A patent/MX2023005925A/es unknown
- 2021-11-18 JP JP2023523524A patent/JP2024508205A/ja active Pending
- 2021-11-18 US US18/037,534 patent/US20240239849A1/en active Pending
- 2021-11-18 CA CA3199519A patent/CA3199519A1/en active Pending
- 2021-11-18 WO PCT/CU2021/050011 patent/WO2022105948A2/es active Application Filing
- 2021-11-18 EP EP21865361.6A patent/EP4249500A2/en active Pending
- 2021-11-18 CN CN202180071094.XA patent/CN116406282A/zh active Pending
-
2023
- 2023-06-15 CO CONC2023/0007878A patent/CO2023007878A2/es unknown
Also Published As
Publication number | Publication date |
---|---|
CN116406282A (zh) | 2023-07-07 |
MX2023005925A (es) | 2023-05-29 |
JP2024508205A (ja) | 2024-02-26 |
CA3199519A1 (en) | 2022-05-27 |
US20240239849A1 (en) | 2024-07-18 |
WO2022105948A2 (es) | 2022-05-27 |
CU20200086A7 (es) | 2022-06-06 |
WO2022105948A3 (es) | 2022-10-20 |
CO2023007878A2 (es) | 2023-07-21 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
KR102624665B1 (ko) | 항균 요법 | |
Martinez de Tejada et al. | Bacterial cell wall compounds as promising targets of antimicrobial agents I. Antimicrobial peptides and lipopolyamines | |
DK2938352T3 (en) | CYLIC CATIONIC PEPTIDES WITH ANTIBMICROBIAL ACTIVITY | |
KR102499670B1 (ko) | 라이신 치환을 포함하는 Romo1 유래 항균 펩타이드 및 그 변이체 | |
Conlon et al. | Potent and rapid bactericidal action of alyteserin-1c and its [E4K] analog against multidrug-resistant strains of Acinetobacter baumannii | |
CN113480627B (zh) | 一种抗菌肽及其应用 | |
Park et al. | Bactericidal activities and action mechanism of the novel antimicrobial peptide Hylin a1 and its analog peptides against Acinetobacter baumannii infection | |
US20080234188A1 (en) | Antimicrobial Peptides | |
Kumar et al. | Antimicrobial and anti-inflammatory activities of short dodecapeptides derived from duck cathelicidin: Plausible mechanism of bactericidal action and endotoxin neutralization | |
RU2660351C2 (ru) | Антимикробные пептиды | |
Rajasekaran et al. | The design of a cell-selective fowlicidin-1-derived peptide with both antimicrobial and anti-inflammatory activities | |
EP4249500A2 (en) | Peptide entities with antimicrobial activity against multi-drug resistant pathogens | |
EP2905288B1 (de) | Synthetische artifizielle Peptide mit antimikrobieller Wirkung | |
US7271239B2 (en) | D-isomers of antimicrobial peptide | |
US10723764B2 (en) | Anti-microbial peptides and methods of use thereof | |
JP3361830B2 (ja) | 抗菌性組成物及びそれを有効成分とする薬剤 | |
Giacometti et al. | In vitro activity of amphibian peptides alone and in combination with antimicrobial agents against multidrug-resistant pathogens isolated from surgical wound infection | |
US9220264B2 (en) | Multimeric forms of antimicrobial peptides | |
WO2002040512A2 (de) | Humanes beta-defensin-3 | |
US12116387B2 (en) | Antimicrobial peptides | |
KR100911375B1 (ko) | 개불 유래의 새로운 유사체 항균 펩타이드 및 그의 용도 | |
US20240067685A1 (en) | Hidden antibiotics in the human proteome | |
US20240197823A1 (en) | Cationic antimicrobial peptides and uses thereof | |
CN111378023B (zh) | 一种抗变异链球菌多肽及其应用 | |
WO2024015914A2 (en) | Antimicrobial peptide compounds and methods of use |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
STAA | Information on the status of an ep patent application or granted ep patent |
Free format text: STATUS: UNKNOWN |
|
STAA | Information on the status of an ep patent application or granted ep patent |
Free format text: STATUS: THE INTERNATIONAL PUBLICATION HAS BEEN MADE |
|
PUAI | Public reference made under article 153(3) epc to a published international application that has entered the european phase |
Free format text: ORIGINAL CODE: 0009012 |
|
STAA | Information on the status of an ep patent application or granted ep patent |
Free format text: STATUS: REQUEST FOR EXAMINATION WAS MADE |
|
17P | Request for examination filed |
Effective date: 20230612 |
|
AK | Designated contracting states |
Kind code of ref document: A2 Designated state(s): AL AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL PT RO RS SE SI SK SM TR |
|
P01 | Opt-out of the competence of the unified patent court (upc) registered |
Effective date: 20230928 |
|
DAV | Request for validation of the european patent (deleted) | ||
DAX | Request for extension of the european patent (deleted) |