EP3994283A4 - Method of testing for specific organisms in an individual - Google Patents

Method of testing for specific organisms in an individual Download PDF

Info

Publication number
EP3994283A4
EP3994283A4 EP20849772.7A EP20849772A EP3994283A4 EP 3994283 A4 EP3994283 A4 EP 3994283A4 EP 20849772 A EP20849772 A EP 20849772A EP 3994283 A4 EP3994283 A4 EP 3994283A4
Authority
EP
European Patent Office
Prior art keywords
testing
individual
specific organisms
organisms
specific
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
EP20849772.7A
Other languages
German (de)
French (fr)
Other versions
EP3994283A2 (en
Inventor
Sabine HAZAN
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Individual
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of EP3994283A2 publication Critical patent/EP3994283A2/en
Publication of EP3994283A4 publication Critical patent/EP3994283A4/en
Pending legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Pathology (AREA)
  • Virology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
EP20849772.7A 2019-08-02 2020-07-31 Method of testing for specific organisms in an individual Pending EP3994283A4 (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201962882367P 2019-08-02 2019-08-02
US201962892409P 2019-08-27 2019-08-27
US202062991190P 2020-03-18 2020-03-18
US202063002486P 2020-03-31 2020-03-31
PCT/US2020/044605 WO2021026025A2 (en) 2019-08-02 2020-07-31 Method of testing for specific organisms in an individual

Publications (2)

Publication Number Publication Date
EP3994283A2 EP3994283A2 (en) 2022-05-11
EP3994283A4 true EP3994283A4 (en) 2022-10-12

Family

ID=74503987

Family Applications (1)

Application Number Title Priority Date Filing Date
EP20849772.7A Pending EP3994283A4 (en) 2019-08-02 2020-07-31 Method of testing for specific organisms in an individual

Country Status (4)

Country Link
EP (1) EP3994283A4 (en)
AU (1) AU2020326600A1 (en)
CA (1) CA3149221A1 (en)
WO (1) WO2021026025A2 (en)

Families Citing this family (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN114369671A (en) * 2021-11-25 2022-04-19 上海锐翌生物科技有限公司 Marker microorganism for rheumatic arthritis and application thereof
CN114410809A (en) * 2021-12-08 2022-04-29 上海金翌生物科技有限公司 Slow-transmission constipation marker microorganism and application thereof

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2014138999A1 (en) * 2013-03-14 2014-09-18 University Of Ottawa Methods for the diagnosis and treatment of inflammatory bowel disease
WO2016164402A1 (en) * 2015-04-06 2016-10-13 Oklahoma Medical Research Foundation Methods of diagnosing and treating autoimmune disease
WO2018085817A1 (en) * 2016-11-07 2018-05-11 Zymo Research Corporation Automated method for release of nucleic acids from microbial samples

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2009520957A (en) * 2005-12-21 2009-05-28 エフ．ホフマン−ラ ロシュ アーゲー Method for evaluating colorectal cancer by measuring hemoglobin and M2-PK in stool samples
FR2945545B1 (en) * 2009-05-14 2011-08-05 Univ Aix Marseille Ii METHOD FOR DETECTION OF PROCARYOTE DNA EXTRACTED FROM A SAMPLE SAMPLE

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2014138999A1 (en) * 2013-03-14 2014-09-18 University Of Ottawa Methods for the diagnosis and treatment of inflammatory bowel disease
WO2016164402A1 (en) * 2015-04-06 2016-10-13 Oklahoma Medical Research Foundation Methods of diagnosing and treating autoimmune disease
WO2018085817A1 (en) * 2016-11-07 2018-05-11 Zymo Research Corporation Automated method for release of nucleic acids from microbial samples

Non-Patent Citations (6)

* Cited by examiner, † Cited by third party
Title
DUYTSCHAEVER GWEN ET AL: "Cross-Sectional and Longitudinal Comparisons of the Predominant Fecal Microbiota Compositions of a Group of Pediatric Patients with Cystic Fibrosis and Their Healthy Siblings", APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 77, no. 22, 15 November 2011 (2011-11-15), US, pages 8015 - 8024, XP055803783, ISSN: 0099-2240, Retrieved from the Internet <URL:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3208981/pdf/zam8015.pdf> DOI: 10.1128/AEM.05933-11 *
HOGUE STEPHANIE R ET AL: "A Customized At-Home Stool Collection Protocol for Use in Microbiome Studies Conducted in Cancer Patient Populations", MICROBIAL ECOLOGY, SPRINGER US, NEW YORK, vol. 78, no. 4, 30 March 2019 (2019-03-30), pages 1030 - 1034, XP036935475, ISSN: 0095-3628, [retrieved on 20190330], DOI: 10.1007/S00248-019-01346-2 *
KNOLL REBECCA L. ET AL: "Gut microbiota differs between children with Inflammatory Bowel Disease and healthy siblings in taxonomic and functional composition: a metagenomic analysis", AMERICAN JOURNAL OF PHYSIOLOGY - GASTROINTESTINAL AND LIVER PHYSIOLOGY, vol. 312, no. 4, 1 April 2017 (2017-04-01), US, pages G327 - G339, XP055957978, ISSN: 0193-1857, DOI: 10.1152/ajpgi.00293.2016 *
LI NING ET AL: "Correlation of Gut Microbiome Between ASD Children and Mothers and Potential Biomarkers for Risk Assessment", GENOMICS PROTEOMICS AND BIOINFORMATICS, vol. 17, no. 1, 23 April 2019 (2019-04-23), CN, pages 26 - 38, XP055803780, ISSN: 1672-0229, Retrieved from the Internet <URL:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6520911/pdf/main.pdf> DOI: 10.1016/j.gpb.2019.01.002 *
PASCAL VICTORIA ET AL: "A microbial signature for Crohn's disease", GUT MICROBIOTA, vol. 66, no. 5, 1 May 2017 (2017-05-01), UK, pages 813 - 822, XP055958121, ISSN: 0017-5749, Retrieved from the Internet <URL:https://gut.bmj.com/content/gutjnl/66/5/813.full.pdf> DOI: 10.1136/gutjnl-2016-313235 *
SOURAV SEN GUPTA ET AL: "Metagenome of the gut of a malnourished child", GUT PATHOGENS, BIOMED CENTRAL LTD, LONDON, UK, vol. 3, no. 1, 20 May 2011 (2011-05-20), pages 7, XP021102178, ISSN: 1757-4749, DOI: 10.1186/1757-4749-3-7 *

Also Published As

Publication number Publication date
WO2021026025A3 (en) 2021-03-18
CA3149221A1 (en) 2021-02-11
WO2021026025A2 (en) 2021-02-11
EP3994283A2 (en) 2022-05-11
AU2020326600A1 (en) 2022-02-24

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Effective date: 20220914

RIC1 Information provided on ipc code assigned before grant

Ipc: C12Q 1/70 20060101ALI20220908BHEP

Ipc: C12Q 1/6883 20180101ALI20220908BHEP

Ipc: G16B 30/00 20190101ALI20220908BHEP

Ipc: G01N 33/574 20060101ALI20220908BHEP

Ipc: C12Q 1/689 20180101AFI20220908BHEP

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