EP1861512A4 - Thermal reaction device and method for using the same - Google Patents
Thermal reaction device and method for using the sameInfo
- Publication number
- EP1861512A4 EP1861512A4 EP06739049A EP06739049A EP1861512A4 EP 1861512 A4 EP1861512 A4 EP 1861512A4 EP 06739049 A EP06739049 A EP 06739049A EP 06739049 A EP06739049 A EP 06739049A EP 1861512 A4 EP1861512 A4 EP 1861512A4
- Authority
- EP
- European Patent Office
- Prior art keywords
- same
- reaction device
- thermal reaction
- thermal
- reaction
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
- C12Q1/6818—Hybridisation assays characterised by the detection means involving interaction of two or more labels, e.g. resonant energy transfer
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L3/00—Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
- B01L3/50—Containers for the purpose of retaining a material to be analysed, e.g. test tubes
- B01L3/502—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
- B01L3/5025—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures for parallel transport of multiple samples
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L3/00—Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
- B01L3/50—Containers for the purpose of retaining a material to be analysed, e.g. test tubes
- B01L3/502—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
- B01L3/5027—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip
- B01L3/502715—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip characterised by interfacing components, e.g. fluidic, electrical, optical or mechanical interfaces
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L3/00—Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
- B01L3/50—Containers for the purpose of retaining a material to be analysed, e.g. test tubes
- B01L3/502—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
- B01L3/5027—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip
- B01L3/502738—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip characterised by integrated valves
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2200/00—Solutions for specific problems relating to chemical or physical laboratory apparatus
- B01L2200/06—Fluid handling related problems
- B01L2200/0684—Venting, avoiding backpressure, avoid gas bubbles
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2200/00—Solutions for specific problems relating to chemical or physical laboratory apparatus
- B01L2200/14—Process control and prevention of errors
- B01L2200/142—Preventing evaporation
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2200/00—Solutions for specific problems relating to chemical or physical laboratory apparatus
- B01L2200/14—Process control and prevention of errors
- B01L2200/143—Quality control, feedback systems
- B01L2200/147—Employing temperature sensors
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2300/00—Additional constructional details
- B01L2300/08—Geometry, shape and general structure
- B01L2300/0809—Geometry, shape and general structure rectangular shaped
- B01L2300/0819—Microarrays; Biochips
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2300/00—Additional constructional details
- B01L2300/12—Specific details about materials
- B01L2300/123—Flexible; Elastomeric
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2300/00—Additional constructional details
- B01L2300/18—Means for temperature control
- B01L2300/1805—Conductive heating, heat from thermostatted solids is conducted to receptacles, e.g. heating plates, blocks
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2400/00—Moving or stopping fluids
- B01L2400/06—Valves, specific forms thereof
- B01L2400/0633—Valves, specific forms thereof with moving parts
- B01L2400/0655—Valves, specific forms thereof with moving parts pinch valves
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L7/00—Heating or cooling apparatus; Heat insulating devices
- B01L7/52—Heating or cooling apparatus; Heat insulating devices with provision for submitting samples to a predetermined sequence of different temperatures, e.g. for treating nucleic acid samples
Landscapes
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Analytical Chemistry (AREA)
- General Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Hematology (AREA)
- Clinical Laboratory Science (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Dispersion Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Immunology (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Biophysics (AREA)
- Biotechnology (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
Priority Applications (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP20120160084 EP2518161A1 (en) | 2005-03-18 | 2006-03-20 | Method for detection of mutant alleles |
EP10197437A EP2371453A1 (en) | 2005-03-18 | 2006-03-20 | Microfluidic device |
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US11/084,357 US7604965B2 (en) | 2003-04-03 | 2005-03-18 | Thermal reaction device and method for using the same |
US74996305P | 2005-12-12 | 2005-12-12 | |
PCT/US2006/010103 WO2006102264A1 (en) | 2005-03-18 | 2006-03-20 | Thermal reaction device and method for using the same |
Publications (2)
Publication Number | Publication Date |
---|---|
EP1861512A1 EP1861512A1 (en) | 2007-12-05 |
EP1861512A4 true EP1861512A4 (en) | 2009-12-09 |
Family
ID=37024154
Family Applications (3)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
EP20120160084 Ceased EP2518161A1 (en) | 2005-03-18 | 2006-03-20 | Method for detection of mutant alleles |
EP06739049A Withdrawn EP1861512A4 (en) | 2005-03-18 | 2006-03-20 | Thermal reaction device and method for using the same |
EP10197437A Withdrawn EP2371453A1 (en) | 2005-03-18 | 2006-03-20 | Microfluidic device |
Family Applications Before (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
EP20120160084 Ceased EP2518161A1 (en) | 2005-03-18 | 2006-03-20 | Method for detection of mutant alleles |
Family Applications After (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
EP10197437A Withdrawn EP2371453A1 (en) | 2005-03-18 | 2006-03-20 | Microfluidic device |
Country Status (2)
Country | Link |
---|---|
EP (3) | EP2518161A1 (en) |
WO (1) | WO2006102264A1 (en) |
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EP1758981A4 (en) | 2004-05-28 | 2013-01-16 | Wafergen Inc | Apparatus and methods for multiplex analyses |
WO2007087312A2 (en) | 2006-01-23 | 2007-08-02 | Population Genetics Technologies Ltd. | Molecular counting |
US8252581B2 (en) * | 2007-01-22 | 2012-08-28 | Wafergen, Inc. | Apparatus for high throughput chemical reactions |
US20100093559A1 (en) * | 2007-03-28 | 2010-04-15 | Zhonghui Fan | Microfluidic Array Device and System for Simultaneous Detection of Multiple Analytes |
US9315857B2 (en) | 2009-12-15 | 2016-04-19 | Cellular Research, Inc. | Digital counting of individual molecules by stochastic attachment of diverse label-tags |
US8835358B2 (en) | 2009-12-15 | 2014-09-16 | Cellular Research, Inc. | Digital counting of individual molecules by stochastic attachment of diverse labels |
EP2623613B8 (en) | 2010-09-21 | 2016-09-07 | Population Genetics Technologies Ltd. | Increasing confidence of allele calls with molecular counting |
US10941396B2 (en) | 2012-02-27 | 2021-03-09 | Becton, Dickinson And Company | Compositions and kits for molecular counting |
EP2820174B1 (en) | 2012-02-27 | 2019-12-25 | The University of North Carolina at Chapel Hill | Methods and uses for molecular tags |
EP2820155B1 (en) | 2012-02-28 | 2017-07-26 | Population Genetics Technologies Ltd. | Method for attaching a counter sequence to a nucleic acid sample |
US20160040229A1 (en) | 2013-08-16 | 2016-02-11 | Guardant Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
US11913065B2 (en) | 2012-09-04 | 2024-02-27 | Guardent Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
KR102393608B1 (en) | 2012-09-04 | 2022-05-03 | 가던트 헬쓰, 인크. | Systems and methods to detect rare mutations and copy number variation |
US10876152B2 (en) | 2012-09-04 | 2020-12-29 | Guardant Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
ES2711168T3 (en) | 2013-08-28 | 2019-04-30 | Becton Dickinson Co | Massive parallel analysis of individual cells |
JP2017504307A (en) | 2013-10-07 | 2017-02-09 | セルラー リサーチ, インコーポレイテッド | Method and system for digitally counting features on an array |
ES2784450T3 (en) | 2013-12-28 | 2020-09-25 | Guardant Health Inc | Methods and systems to detect genetic variants |
ES2975332T3 (en) | 2015-02-19 | 2024-07-04 | Becton Dickinson Co | High-throughput single-cell analysis combining proteomic and genomic information |
WO2016134342A1 (en) | 2015-02-20 | 2016-08-25 | Wafergen, Inc. | Method for rapid accurate dispensing, visualization and analysis of single cells |
ES2836802T3 (en) | 2015-02-27 | 2021-06-28 | Becton Dickinson Co | Spatially addressable molecular barcodes |
EP3277843A2 (en) | 2015-03-30 | 2018-02-07 | Cellular Research, Inc. | Methods and compositions for combinatorial barcoding |
WO2016172373A1 (en) | 2015-04-23 | 2016-10-27 | Cellular Research, Inc. | Methods and compositions for whole transcriptome amplification |
US11124823B2 (en) | 2015-06-01 | 2021-09-21 | Becton, Dickinson And Company | Methods for RNA quantification |
WO2017044574A1 (en) | 2015-09-11 | 2017-03-16 | Cellular Research, Inc. | Methods and compositions for nucleic acid library normalization |
JP2019507585A (en) | 2015-12-17 | 2019-03-22 | ガーダント ヘルス, インコーポレイテッド | Method for determining oncogene copy number by analysis of cell free DNA |
CN105653102B (en) * | 2016-03-23 | 2018-12-21 | 南京铁道职业技术学院 | Infrared induction electronic whiteboard |
US10822643B2 (en) | 2016-05-02 | 2020-11-03 | Cellular Research, Inc. | Accurate molecular barcoding |
US10301677B2 (en) | 2016-05-25 | 2019-05-28 | Cellular Research, Inc. | Normalization of nucleic acid libraries |
EP4407625A2 (en) | 2016-05-26 | 2024-07-31 | Becton, Dickinson and Company | Molecular label counting adjustment methods |
US10202641B2 (en) | 2016-05-31 | 2019-02-12 | Cellular Research, Inc. | Error correction in amplification of samples |
US10640763B2 (en) | 2016-05-31 | 2020-05-05 | Cellular Research, Inc. | Molecular indexing of internal sequences |
EP3487616B1 (en) | 2016-07-21 | 2023-08-09 | Takara Bio USA, Inc. | Multi-z imaging of wells of multi-well devices and liquid dispensing into the wells |
KR102522023B1 (en) | 2016-09-26 | 2023-04-17 | 셀룰러 리서치, 인크. | Measurement of protein expression using reagents with barcoded oligonucleotide sequences |
CN109952612B (en) | 2016-11-08 | 2023-12-01 | 贝克顿迪金森公司 | Method for classifying expression profiles |
KR20190077061A (en) | 2016-11-08 | 2019-07-02 | 셀룰러 리서치, 인크. | Cell labeling method |
WO2018132610A1 (en) | 2017-01-13 | 2018-07-19 | Cellular Research, Inc. | Hydrophilic coating of fluidic channels |
CN110192089A (en) * | 2017-01-19 | 2019-08-30 | 安捷伦科技有限公司 | More temperature spectrometer modules, system and its application method |
CN110382708A (en) | 2017-02-01 | 2019-10-25 | 赛卢拉研究公司 | Selective amplification is carried out using blocking property oligonucleotides |
CN110719959B (en) | 2017-06-05 | 2021-08-06 | 贝克顿迪金森公司 | Sample indexing for single cells |
US11946095B2 (en) | 2017-12-19 | 2024-04-02 | Becton, Dickinson And Company | Particles associated with oligonucleotides |
JP7358388B2 (en) | 2018-05-03 | 2023-10-10 | ベクトン・ディキンソン・アンド・カンパニー | Molecular barcoding at opposite transcript ends |
US11773441B2 (en) | 2018-05-03 | 2023-10-03 | Becton, Dickinson And Company | High throughput multiomics sample analysis |
EP3861134A1 (en) | 2018-10-01 | 2021-08-11 | Becton, Dickinson and Company | Determining 5' transcript sequences |
CN112969789A (en) | 2018-11-08 | 2021-06-15 | 贝克顿迪金森公司 | Single cell whole transcriptome analysis using random priming |
EP3894552A1 (en) | 2018-12-13 | 2021-10-20 | Becton, Dickinson and Company | Selective extension in single cell whole transcriptome analysis |
WO2020150356A1 (en) | 2019-01-16 | 2020-07-23 | Becton, Dickinson And Company | Polymerase chain reaction normalization through primer titration |
CN113574178A (en) | 2019-01-23 | 2021-10-29 | 贝克顿迪金森公司 | Oligonucleotides associated with antibodies |
WO2020214642A1 (en) | 2019-04-19 | 2020-10-22 | Becton, Dickinson And Company | Methods of associating phenotypical data and single cell sequencing data |
WO2021016239A1 (en) | 2019-07-22 | 2021-01-28 | Becton, Dickinson And Company | Single cell chromatin immunoprecipitation sequencing assay |
US11773436B2 (en) | 2019-11-08 | 2023-10-03 | Becton, Dickinson And Company | Using random priming to obtain full-length V(D)J information for immune repertoire sequencing |
WO2021146207A1 (en) | 2020-01-13 | 2021-07-22 | Becton, Dickinson And Company | Methods and compositions for quantitation of proteins and rna |
EP4150118A1 (en) | 2020-05-14 | 2023-03-22 | Becton Dickinson and Company | Primers for immune repertoire profiling |
US11932901B2 (en) | 2020-07-13 | 2024-03-19 | Becton, Dickinson And Company | Target enrichment using nucleic acid probes for scRNAseq |
US11739443B2 (en) | 2020-11-20 | 2023-08-29 | Becton, Dickinson And Company | Profiling of highly expressed and lowly expressed proteins |
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WO2004089810A2 (en) * | 2003-04-03 | 2004-10-21 | Fluidigm Corp. | Microfluidic devices and methods of using same |
US20050252773A1 (en) * | 2003-04-03 | 2005-11-17 | Fluidigm Corporation | Thermal reaction device and method for using the same |
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2006
- 2006-03-20 WO PCT/US2006/010103 patent/WO2006102264A1/en active Application Filing
- 2006-03-20 EP EP20120160084 patent/EP2518161A1/en not_active Ceased
- 2006-03-20 EP EP06739049A patent/EP1861512A4/en not_active Withdrawn
- 2006-03-20 EP EP10197437A patent/EP2371453A1/en not_active Withdrawn
Patent Citations (2)
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WO2004089810A2 (en) * | 2003-04-03 | 2004-10-21 | Fluidigm Corp. | Microfluidic devices and methods of using same |
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Non-Patent Citations (5)
Title |
---|
OEHLER VIVIAN G ET AL: "Absolute quantitative detection of Abl tyrosine kinase domain mutations using a novel microfluidic platform and allele-specific PCR", BLOOD 16 NOV 2005, vol. 106, no. 11, 16 November 2005 (2005-11-16), pages ABSTRACT 2859, XP002550112, ISSN: 0006-4971, Retrieved from the Internet <URL:http://abstracts.hematologylibrary.org/cgi/content/abstract/106/11/2859?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=&fulltext=absolute+quantitative+tyrosine+kinase&searchid=1&FIRSTINDEX=0&volume=106&issue=11&resourcetype=HWCIT> [retrieved on 20091012] * |
POHL GUDRUN ET AL: "Principle and applications of digital PCR", EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, FUTURE DRUGS, LONDON, GB, vol. 4, no. 1, 1 January 2004 (2004-01-01), pages 41 - 47, XP009109051, ISSN: 1473-7159 * |
See also references of WO2006102264A1 * |
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Also Published As
Publication number | Publication date |
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EP2518161A1 (en) | 2012-10-31 |
EP2371453A1 (en) | 2011-10-05 |
WO2006102264A1 (en) | 2006-09-28 |
EP1861512A1 (en) | 2007-12-05 |
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