EP1789545A1 - Stress tolerant organisms expressing a map kinase homologue - Google Patents
Stress tolerant organisms expressing a map kinase homologueInfo
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- EP1789545A1 EP1789545A1 EP05777745A EP05777745A EP1789545A1 EP 1789545 A1 EP1789545 A1 EP 1789545A1 EP 05777745 A EP05777745 A EP 05777745A EP 05777745 A EP05777745 A EP 05777745A EP 1789545 A1 EP1789545 A1 EP 1789545A1
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- ehhog
- dna
- seq
- plant
- protein
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/10—Transferases (2.)
- C12N9/12—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
- C12N9/1205—Phosphotransferases with an alcohol group as acceptor (2.7.1), e.g. protein kinases
Definitions
- the present invention relates to a MAP kinase homologue gene, designated EhHOG, isolated from Eurotium herbariorum, a common fungal species from the extreme hypersaline environment of the Dead Sea, to vectors comprising it, and to transgenic plants and other organisms containing said gene.
- EhHOG MAP kinase homologue gene
- it relates to methods for conferring salt tolerance and other generalized stresses tolerance such as heat tolerance, oxidative tolerance osmotic tolerance and freezing-thawing tolerance on plants and other organisms.
- MAPK MAP kinase cascades to regulate various aspects of cellular function
- MAPKs that specifically transmit environmental stress signals are also known as stress activated protein kinases. This pathway is called the high osmolarity glycerol (HOG) response pathway in Saccharomyces cerevisiae (Brewster et al., 1993).
- HOG high osmolarity glycerol
- Spcl also called Styl
- S. cerevisiae hogl mutants are sensitive to high osmolarity
- spcl mutations in S. pombe result in sensitivity to high osmolarity, heat shock, and oxidative stress.
- Activation of the HOG pathway increases the transcription of some proteins, including enzymes involved in glycerol synthesis (Albertyn et al., 1994; Norbeck et al., 1996).
- HOGl gene holds a key position in osmoadaptation of the yeast S. cerevisiae.
- HOGl homologous genes have been reported in fungal species (Degols et al., 1996), plants (Hirt, 1997), and animals (Marshall, 1994) indicating that this pathway is conserved among eukaryotes. However, no information is available in osmosensing signal transduction pathway in E. herbariorum.
- calcineurin or phosphoprotein phosphatase type 2B (PP2B)
- PP2B phosphoprotein phosphatase type 2B
- yeast strains which do not contain active calcineurin proteins are more sensitive to growth inhibition by salt than are wild-type strains.
- Bacterial genes associated with salt tolerance have also been identified (Tarczynski et al., 1993).
- transgenes related mainly to the synthesis of osmolytes, have been introduced in tobacco (Traczynski et al., 1993) and Arabidopsis (Hayashi et al., 1997). In general, the expression of those transgenes seems to confer a low tolerance level to osmotic (water deficit) and/or salt (NaCl) stress.
- US Patent 5,859,337 describes isolation of two genes from Arabidopsis coding for STZ and STO polypeptides, capable of conferring salt tolerance to plants and other organisms.
- PCT Publication WO 03/097827 discloses salt-tolerant tomato plants comprising betaine aldehyde dehydrogenase (BADH) gene.
- BADH betaine aldehyde dehydrogenase
- the present invention relates to a MAP kinase homologue gene isolated from Eurotium herbariorum, herein designated EhHOG, the coding region of said EhHOG gene being represented by SEQ ID NO: 1 herein, and to an isolated DNA having a nucleotide sequence differing from SEQ. ID NO: 1 in codon sequence due to the degeneracy of the genetic code.
- EhHOG codes for the EhHOG protein of SEQ ID NO: 2.
- the present invention further relates to plants and other organisms transformed with said EhHOG gene and expressing the EhHOG protein of SEQ ID NO: 2, which confers tolerance to abiotic stresses such as osmotic, high salinity, heat, freeze, dehydration, or oxidative stress.
- Figs. 1A-1B show that the EhHOG gene encodes a member of the stress MAPK family.
- IA Multiple alignment (CLUSTAL W software) of homologous protein from E. herbariorum, EhHOG; A. nidulans, SakA (AnSaka) (AF282891); A. nidulans, Mpkc (AnMpkC) (AF195773); S. pombe, STYl (SpSTYl) (X89262) and S. cerevisiae, Hogl (ScHogl) (U53878), is shown. Conserved TGY phosphorylation lip found in stress MAP kinases is shaded.
- IB Rooted phylogenetic tree of MAPK family constructed by the neighbor-joining method (45) based on amino acid sequences by the program MEGA 2.1. The numbers at nodes are bootstrap confidence values based on 1,000 replicaes. The tree was corrected with Poisson correction. Accession numbers of used genes were listed in the supplementary table.
- Fig. 2 shows Southern blot analysis of E. herbariorum EhHOG gene.
- the genomic DNA was digested with EcoRI (lane 1); BamHI (lane 2); HindIII (lane 3); AIuI (lane 4).
- a 800bp PCR fragment was used as a probe.
- Fig. 3 A shows the growth of the S. cerevisiae strains: mutant hog IA (E), wild type (A), hoglA containing EhHOG (E+EhHOG), and hoglA containing empty plasmid pADNS (E+pA), in the presence of LiCl, NaCl, KCl, MgCl 2 , CaCl 2 , Dead Sea water, and sorbitol.
- Fig. 3B are graphs showing the growth curves of yeast strains in YPD medium (upper graph), 250 mM LiCl (middle graph), 30OmM LiCl (bottom graph).
- A wild type; E, mutant (hoglA); E- EhHOG, hoglA containing EhHOG; E-PA, empty vector. Growth of cells was estimated by measuring turbidity at 600 nm.
- Fig. 4 shows the morphology of S. cerevisiae wild type strain (YSH6.142- 3A), hoglA (YSH444), YSH444 containing EhHOG strain (YSH444/ EhHOG) and ⁇ SH444/empty plasmid.
- Cells were grown in the presence of 250 mM LiCl.
- Fig. 5 is a graph showing the change of intracellular glycerol content in S. cerevisiae strains wild type (W), hoglA mutant (M) and mutant containing EhHOG gene (M/pEhHOG).
- W wild type
- M hoglA mutant
- M/pEhHOG mutant containing EhHOG gene
- Fig. 6 shows heat stress tolerance of various yeast strains.
- Yeast cells M (mutant hogl ⁇ ) (1), transformant M/EhHOG (2), and wild type (3) were grown for 24 h in SD (minimal medium) and cell density was adjusted to OD600 at 1.8. Serial dilutions of ten times were made. Ten microliters of each dilution was spotted on solid YPD plates (control). Cells on YPD plates were treated in 42 0 C for 1 day and allowed to recover at 28 0 C for 36 h (A) and 69 h (B); for 2-day heat stress, cells recovered at 28 0 C for 48 h (C).
- Figs. 7A-7B show freeze stress and oxidative stress tolerance in various yeast strains.
- 7A Freeze stress tolerance of cells was determined by measuring viability after a number of freeze-thaw cycles (-30 0 C and room temperature).
- 7B Freeze stress tolerance of cells was determined by measuring viability after a number of freeze-thaw cycles (-30 0 C and room temperature).
- the present invention relates to an isolated gene comprising a DNA having a nucleotide sequence selected from the group consisting of SEQ ID NO: 1 and isolated DNA having a nucleotide sequence differing from SEQ ID NO: 1 in codon sequence due to the degeneracy of the genetic code.
- the DNA of SEQ ID NO: 1 corresponds to the coding region of the EhHOG gene, isolated from Eurotium herbariorum, found in the Dead Sea, Israel. This gene codes for the EhHOG protein of the amino acid sequence shown in SEQ ID NO: 2.
- the present invention further relates to a chimeric gene construct capable of expression in plant cells and in other microorganisms, like yeasts, comprising: (a) a DNA sequence of SEQ ID NO: 1 coding for the EhHOG protein of SEQ ID NO: 2, and (b) DNA sequences enabling expression of the EhHOG protein in the host cells.
- one of the DNA sequences that enable the expression of the EhHOG protein in the host cell is a promoter.
- Such promoter may be a constitutive promoter, a stress-induced promoter, a tissue-specific promoter and any other promoter known in the art that enables the expression of the EhHOG protein in the host cell.
- the invention further relates to a recombinant vector carrying the gene comprising a DNA having a nucleotide sequence consisting of SEQ ID NO: 1, in particular a recombinant expression vector comprising a chimeric gene construct in which the DNA of SEQ ID NO: 1 is operably linked to DNA sequences enabling expression of the EhHOG protein in host cells such as plant cells, yeasts or other microorganisms.
- the vector used to introduce the nucleic acid into the host cell may be a plasmid, in which the DNA encoding the EhHOG protein is inserted into a unique restriction endonuclease cleavage site.
- the DNA is inserted into the vector using standard cloning procedures readily known in the art.
- the resulting plasmid which includes nucleic acid encoding the EhHOG protein, can then be used to transform a plant cell (see generally, Gelvin and Schilperoort, 1994), or to transform another host cell.
- the plasmid preferably also includes a selectable marker.
- selectable markers include the kanamycin-resistance, kanamycin phosphotransferase II (nptll) gene, the hygromycin-resistance, hygromycin phosphotransferase (hpt) gene, the phosphinothricin acetyl transferase gene (bar), the 5-enolpyruvylshikimate-3 -phosphate synthase (EPSPS), neomycin 3'-O-phosphotransferase (npt II), or acetolactate synthase (ALS).
- the selectable marker is the hpt or nptll gene that allows selection of the transformants with hygromycin or kanamycin, respectively.
- the plasmid may also include a reporter gene that, upon expression, provides a clear indication that genetic transformation did take place.
- reporter genes are beta-glucuronidase (GUS), luciferase and green fluorescent protein (GFP). Reporter genes are often placed downstream of the promoter region and in the proximity of the gene of interest to ensure that they are expressed together and not separated by crossover events.
- the plasmid preferably also includes suitable promoters for expression of the nucleic acid encoding the EhHOG protein and for expression of the selectable marker gene.
- the promoter is a constitutive promoter, for example, the cauliflower mosaic virus 35S (35 S CaMV) promoter, commonly used for plant transformation, as well as the rice actin 1 (Actl), the Ubiquitin 1 (Ubil), the alpha-amylase gene promoter, and promoters of genes induced by stress.
- the promoter may be a tissue- specific promoter or the endogenous promoter of the EhHOG gene.
- the promoter used in the present invention is the 35S CaMV promoter.
- the nucleic acid encoding the EhHOG protein may be under the control of one promoter and the marker gene may be under control of the same or of a different promoter.
- the present invention provides host cells, e.g., plant cells carrying the nucleic acid of SEQ ID NO: 1 encoding the EhHOG protein.
- the present invention provides transgenic plants carrying the nucleic acid of SEQ ID NO: 1 encoding the EhHOG protein.
- the plasmid also preferably includes a nucleic acid molecule encoding a 3' terminator such as that from the 3' non-coding region of genes encoding a proteinase inhibitor, actin, or nopaline synthase (NOS).
- a 3' terminator such as that from the 3' non-coding region of genes encoding a proteinase inhibitor, actin, or nopaline synthase (NOS).
- NOS nopaline synthase
- the plasmid includes an enhancer element or elements that enhance the transcription of the EhHOG gene.
- the plasmid is preferably a binary vector in which the genes of interest are inserted within the T-DNA borders.
- vectors that can be used in the present invention are vectors obtainable from commercial sources such as the pCambia 1301, the pBI121, which contains a low-copy RK2 origin of replication, the neomycin phosphotransferase (nptll) marker gene with a nopaline synthase (NOS) promoter and a NOS 3' polyadenylation signal, the pBHOl and functionally similar vectors described by Becker et al. (1992), and the pPZPYl 12 vector.
- any suitable method can be used such as Agrobacterium-mediated transformation or particle bombardment (also known as biolistic transformation).
- plant cells are contacted with an inoculum of the bacteria transformed with the plasmid comprising the gene that encodes for the EhHOG protein of the invention, for example by inoculating the plant cells with a suspension of the transformed bacteria.
- suitable bacteria from the genus Agrobacterium that can be utilized to transform plant cells include the species Agrobacterium rhizogenes and Agrobacterium tumefaciens, preferably A. tumefaciens strains LBA4404 or EHA105.
- Agrobacterium spp. are transformed with the plasmid by conventional methods well-known in the art.
- the A. tumefaciens strain carrying the EhHOG gene in the binary vector is grown in a growth medium in the presence of antibiotic, e.g. kanamycin, to select for the binary plasmid.
- the bacteria are spun down and resuspended in a 5% sucrose solution, followed by the addition of a surfactant, e.g. Silwet L-77.
- a surfactant e.g. Silwet L-77.
- the plants (after flowering) are dipped into the bacteria solution and kept under a dome or cover for 16-24 hours.
- the seeds are recovered and putative transformants are selected by plating the sterilized seeds on an antibiotic, e.g. hygromycin, and transplanting the putative transformants to soil.
- plants may be dipped two or three times at seven day intervals.
- direct insertion of the DNA of interest may be carried out using the particle bombardment (biolistics) technique.
- particle bombardment biolistics
- rapidly propelled tungsten or gold microprojectiles which are smaller than the plant cells coated with the DNA of interest are blasted into cells.
- the target tissue is bombarded with the DNA-coated particles under vacuum, the DNA of interest disperses from the particles within the cells and then integrates into their genome (Harwood et al., 2000).
- the particle bombardment technique can be combined with the Agrohacterium technique to facilitate transformation (Tingay et al., 1997; Cheng et al., 1997)
- the invention further relates to a transgenic plant transformed with the DNA of SEQ ID NO: 1, that encodes the protein EhHOG consisting of the amino acid sequence as shown in SEQ ID NO: 2, said DNA being operably linked to DNA sequences enabling expression of the EhHOG protein in plant cells and subsequent improvement of tolerance of the plant to abiotic stresses such as osmotic, heat, freeze, dehydration, oxidative or high salinity stresses.
- the invention includes a transgenic plant which contains in its cells a chimeric gene construct capable of expression in plant cells, comprising: (a) a DNA sequence of SEQ ID NO: 1 coding for the EhHOG protein of SEQ ID NO: 2, and (b) DNA sequences enabling expression of the EhHOG protein in plant cells.
- the transgenic plant of the invention may also contain an enhancer element or elements that enhances the transcription of the SEQ ID NO: I 5 independent of orientation of the enhancer or its distance from the gene promoter.
- the transgenic plants according to the invention include, without being limited to, edible crop species such as tomatoes, beans, including soybeans, and peas, and cereals such as wheat, barley, corn, rice, oats, and forage and turf grasses.
- the invention relates to a host cell, e.g., a microorganism, preferably yeast, cell comprising the DNA sequence of SEQ ID NO:1 coding for the EhHOG protein.
- a host cell e.g., a microorganism, preferably yeast
- the invention relates to a biologically pure culture of a microorganism, preferably yeast, comprising the DNA of SEQ ID NO: 1 that encodes the protein EhHOG consisting of the amino acid sequence as shown in SEQ ID NO: 2, said DNA being operably linked to DNA sequences enabling expression of the EhHOG protein in the microorganism cells and subsequent improvement of tolerance of the microorganism to abiotic stresses, such as osmotic, heat, freeze, dehydration, oxidative or particularly, high salinity, stresses.
- abiotic stresses such as osmotic, heat, freeze, dehydration, oxidative or particularly, high salinity, stresses.
- plasmids capable of autonomous replication in the yeast cell by the presence of a replication origin recognized by the replication machinery of the host cell.
- These plasmids generally comprise the replication origin of the 2-micron plasmid present in most of this species, or even as ARS segment of autonomous replication of chromosomal origin.
- a marker gene there is generally used a gene which codes for an enzyme involved in the biosynthesis of an essential metabolite, e.g., an amino acid.
- the host cell to be used is a yeast strain, which, through mutation, has become auxotrophic for this metabolite.
- plasmids By inoculating with this strain a medium free from said metabolite, only those cells transformed by a plasmid bearing the missing gene will be able to grow. These plasmids often further comprise bacterial sequences capable of ensuring their replication and their selection in an intermediate bacterial host, e.g., Escherichia coli. Finally, to ensure an expression level as high as possible of the coding part of interest, it is necessary to associate it with an efficient promoter.
- Various strong promoters are known in yeast, e.g., the promoters of alcohol dehydrogenase (ADH) , 3 -phosphogly cerate kinase (PGK) and galactose (GAL).
- the carbohydrates which can be utilized by the yeast strains of the present invention include any of the starch or sugar containing materials normally fermented to form ethanol or carbon dioxide, including for example, grapes.
- the fermentations are normally run under the usual fermentation conditions.
- the fermentation product may then be further treated to produce a beverage such as bear or wine.
- the yeast strains may be also used as a leaving agent in baked goods.
- the invention further encompasses the transformation of other microorganisms, e.g. genetically modified microorganisms for industrial purposes in food, agriculture, medicine and mining.
- microorganisms for use in biodetergentes or for production of enzymes for use in detergents, bacteria that synthesize useful products such as indigo, the compound used to dye jeans blue, etc.
- These microorganisms are subject to stress during the industrial process and their transformation according to the invention will increase their tolerance to salinity, heat, freeze and other stresses.
- the salt tolerant transgenic plants or other organisms of the invention are capable of growing under saline conditions, which inhibit the growth of at least 95% of the parent, non-salt tolerant plant or other organisms from which the salt tolerant organisms are derived.
- the growth rate of salt tolerant organisms of the invention will be inhibited by less than 50%, preferably less than 30%, and most preferably will have a growth rate which is not significantly inhibited by a growth medium containing water soluble inorganic salts which inhibits growth of at least 95% of the parental, non-salt tolerant plant.
- Salt concentration under which organisms of the invention are capable of growing are typically between about 20 mM and about 500 niM, often between 40 mM and about 300 mM.
- exemplary water-soluble inorganic salts commonly encountered in saline soils are alkali metal salts, alkaline earth metal salts, and mixtures of alkali metal salts and alkaline earth metal salts.
- the transformed cells with the salt tolerance phenotype can be selected in vitro by culturing the cells on media containing increased inorganic salt concentrations. For instance, callus tissue can be transferred to standard tissue culture media supplemented with inorganic salts described above, typically sodium chloride.
- the salt concentration will typically be greater than about 80 mM, preferably about 140 mM, to about 30 mM. The concentration will vary depending upon the sensitivity of the plant being transformed.
- Transformed plant cells which are derived by any of the above transformation techniques can be cultured to regenerate a whole plant, which possesses the transformed genotype and thus display the salt tolerant phenotype.
- Such regeneration techniques rely on manipulation of certain phytohormones in a tissue culture growth medium, typically relying on a biocide and/or herbicide marker, which has been introduced together with the desired nucleotide sequences.
- the expression vector is stably incorporated in transgenic plants and confirmed to be operable, it can be introduced into other plants by sexual crossing. Any of a number of standard breeding techniques can be used, depending upon the species to be crossed.
- YSH6.142-3A MATa leu2-S/112 uraS-1 trpl-1 his3-ll/15 ade2-l canl-100 GAL SUC2 malO
- YSH444 MATa hogl ⁇ ::TRPl mutant
- Yeast cells were grown in a rich medium (YPD) containing 1% yeast extract, 2% peptone, and 2% glucose or in a minimal medium (SD) containing 0.67% yeast nitrogen base and 2% (w/v) glucose supplemented with required amino acids on a rotatory shaker at 30 0 C (Sherman, 1991).
- RNA isolation Mycelia of E. herbariorum cultured in GY medium for 2 weeks and harvested by filtration were then soaked in fresh GY medium with 2 M NaCl for various periods of time. Total RNA was prepared from E. herbariorum by Total RNA Isolation Kit (Beit Haemek, Israel). DNA from E. herbariorum was isolated and purified by a modification of the method of Raeder and Broda (Mcalpin, CE. 1995). Genomic DNA of yeast was isolated according to a basic protocol (Philippsen et al, 1991).
- an EhHOG-containing DNA fragment (approximately 800bp) was obtained by PCR amplification with the oligonucleotides: 5'-AAGAAGATTATGAAGCCTTTCAGC-S' (SEQ ID NO:3) and 5'- CATAATTTTCCATGTGTCGACCGG -3' (SEQ ID NO :4) as the primers, and was labeled with [ 32 T] dCTP by random primer labeling kit (Beit Haemek, Israel).
- the method of hybridization (68 0 C) is the same with Southern blots.
- Hybridization was done in 5 x saline-sodium phosphate-EDTA (SSPE), 5' Denhardt's solution, and 0.5% sodium dodecyl sulphate (SDS) for 16 h at 68°C; filter was washed in 2 x saline-sodium citrate (SSC) containing 0.1% SDS at 50 0 C (2 ⁇ 30 min), 60 0 C (30 min).
- SSPE 5 x saline-sodium phosphate-EDTA
- SDS sodium dodecyl sulphate
- EhHOG gene from E. herbariorum Isolation of EhHOG gene from E. herbariorum.
- PCR was performed using genomic DNA as the template and oligonucleotides 5'-ATGGCGGAATTCGTGCGTGCCACGATT-S' (SEQ ID NO:5) and 5'-GGCCGCGAATGCCTGCTGGCCATCCCC-S ' (SEQ ID NO:6) as the primers.
- PCR amplification was performed using a Peltier thermal cycler (PTC 100, MJ Research, USA) for 35 cycles. Each cycle consisted of 30s at 94°C, 30s at 55°C and 1 min at 72 0 C.
- RT-PCR reverse transcription PCR
- two HOG specific primers 5'-CAAAGCTTATGGCGGAATTCGTGCGTGCCACGATT-S ' (SEQ ID NO:7) and 5'-GGCCGCGAATGCCTGCTGGCCATCCCC-S ' (SEQ ID NO:8) were synthesized.
- First-strand cDNA synthesis was performed in a 20 ⁇ l reaction mixture according to cDNA Synthesis system (Promega). The 1 ⁇ l sample of first strand cDNA products was then employed as template DNA in PCR for E.
- PCR amplification was performed with 50 ⁇ l reaction that contained 5 ⁇ l lOxbuffer, 0.2 mM dNTPs (2ul 5mM dNTPs), 1 ⁇ l 10 ⁇ M HOG specific primer, and 2 units Taq Polymerase (Biotools), using a Peltier thermal cycler for 30 cycles. Each cycle consisted of 30s at 94 0 C, 30s at 55 0 C, and 1 min at 72 0 C. The amplified fragments were subcloned into pGEM-T easy (Promega) and sequenced. (v)Phylogenetic analysis.
- Phylogenetic trees based on the amino acid sequences alignment of 36 MAPKs were constructed using the neighbor-joining method (Saitou & Nei, 1987) implemented in MAGA2.1 (Kumar et al., 2001). Reliability of the tree topology was evaluated by bootstrap analysis of 1,000 replicates. The resulting estimated amino acid distances were corrected for multiple amino acid substitutions per single site by Poisson correction.
- Transformation of yeast cells with pADNS-EhHOG was performed by the lithium acetate/single-stranded carrier DNA/polyethylene glycol methods (Gietz & Woods, 2002).
- the EhHOG gene was expressed in S. cerevisiae wild strain YSH6.142-3A and mutant YSH444 (MATa hogl AiTRPl), which lacks HOGl .
- Cultures of strains transformed with pADNS or pADNS-EhGPD were grown in SD-LEU medium and YPD medium in the presence or absence of various concentrations of NaCl, LiCl, and sorbitol.
- cells were grown at 3O 0 C for 36 hours; density was adjusted to OD600 at 2. Serial dilution, 1/10, was made at each step.
- the survival percent was expressed relative to the initial viability prior to freezing.
- cells were grown to OD 6 oo 1.0-1.5 in SD medium at 30 0 C and then incubated for 1.5 h with increasing concentrations of H 2 O 2 in SD.
- the survival percent was expressed relative to the initial viability prior to oxidative stress.
- RNA was prepared from wild type strain YSH6.142-3A, mutant strain YSH444, and transformant pADNS-EhHOG according to total RNA Isolation Kit (Beit Haemek, Israel).
- the DNA fragment that encodes the GPDl of S. cerevisiae was prepared by PCR amplification with oligonucleotides 5'- ATGTCTGCTGCTGCTGATAG-3' (SEQ ID NO: 11) and 5'- AGAGCCTCGAAAAAAGTGGG-3' (SEQ ID NO: 12) as primers and genomic DNA as a template.
- the DNA fragment was labeled with [ 32" P]dCTP by random primer labeling kit (Beit Haemek, Israel) and used as a GPDl probe.
- Northern blot analysis was carried out as described above.
- the cell pellet was then suspended in 5 ml distilled water and disrupted by vortexing for 10 min with 5g glass beads at 4 0 C.
- the homogenate was centrifuged for 20 min at 10,000g at 4°C.
- the supernatant was immediately heated for 10 min in boiling water to inactivate enzymes connected to the metabolism of glycerol. After centrifugation for 20 min at 10,000g to remove denatured protein, the supernatant was used to measure the intracellular glycerol concentration.
- the glycerol content was determined according to the application manual of the glycerol-F kit (Boehringer Mannheim).
- EXAMPLE 1 Isolation and characterization of the EhHOG from E. herbariorum
- E. herbariorum Successful amplification of Hogl homologue in E. herbariorum was achieved with primers (SEQ ID NOs:. 3 and 4) derived from conserved regions of Hogl from various fungal species available, with flanking regions obtained by chromosome walking (Arnold & Hodgson, 1991). DNA sequence analysis revealed a long open reading frame (ORF) interrupted by eight introns, whose positions were confirmed by sequencing cDNA and genomic DNA clones. This ORF predicted 366-amino acid residues, protein weights of 41.62 KDa, which were highly similar to a kinase from the stress-activated MAPK family. Therefore, the corresponding gene was named EhHOG (Eurotium herbariorum HOG).
- EhHOG Eurotium herbariorum HOG
- CD conserveed common docking domain (CD) motif of the MAPK family is present in EhHogp (Fig. IA).
- the CD domain contains two acidic amino acids (Asp304, Asp307) (Fig. IA), which is crucial for docking to a cluster of basic amino acids commonly present in MAPK-docking sites (Tanoue et al., 2000).
- Asp- 304, Asp-307 of EhHogp could serve to establish critical electrostatic interactions with the positively charged amino acids of docking domains of upstream and downstream effectors together with the hydrophobic amino acids Tyr-302 and His- 303.
- This docking motif in MAPKs is commonly used for recognition of their activators, regulators, and substrates.
- EXAMPLE 2 Complementation and overexpression of a S. cerevisiae hogl ⁇ mutant by EhHOG in high salt stress
- complementation of S. cerevisiae hogl ⁇ null mutant was carried out with EhHOG.
- the salt tolerance of hogl ⁇ (YSH444 strain) is lower than that of the wild-type strain, because GPDH activity in response to osmotic stress is low when HOGl (MAP kinase gene) is deleted (Albertyn et al., 1994). If EhHOG could complement the deletion of HOGl in the S.
- EhHOG The coding region of EhHOG was subcloned into a yeast 2 ⁇ vector PADNS and recombinant plasmid (pADNS/EhHOG). DNA was transformed into the hogl ⁇ (YSH444 strain). The transformants were spotted on plates containing IM NaCl, IM KCl, 2M Sorbitol, 0.4M CaCl 2 , 20% Dead Sea water and 30OmM LiCl (Fig. 3A).
- the mutant hogl ⁇ could not grow on these plates, but the transformant strain (YSH444 strain containing EhHOG) indicated growth that was comparable to the wild type strain under all these stress conditions and even more tolerant and faster than wild type strain in 300 mM LiCl (Fig. 3A, Fig. 3B).
- YSH444 strain containing EhHOG indicated growth that was comparable to the wild type strain under all these stress conditions and even more tolerant and faster than wild type strain in 300 mM LiCl (Fig. 3A, Fig. 3B).
- S. cerevisiae hogl ⁇ null mutant has an aberrant cell morphology under osmotic stress due to large multinucleated cells with multiple elongated buds (Brewster et al., 1993).
- hogl ⁇ mutant containing EhHOG showed normal cell shape (Fig. 4). This indicated that the abnormal cell shape of hogl ⁇ mutants could be rescued by the expression of EhHOG.
- EhHOG cDNA complemented the hogl ⁇ null mutation and restored cell growth (Fig. 3A) and morphology (Fig. 4) under salt and osmotic stress conditions.
- HOG pathway MAP kinase pathway
- Li + is highly toxic to microorganisms and plants at much lower concentrations compared with that Of Na + .
- Li + has been widely used as an analogue for Na + in research on stress with yeasts and plant because of its high sensitivity to all cells and, moreover, low concentrations can be utilized, avoiding screening for osmotolerance (Bohnert et al., 1995).
- the Li + concentration in the Dead Sea water is about 100 times higher than that of the normal seas, while the differentials with Na + and K + are only about 3 and 20 times, respectively (Mason, 1974; Beyth, 1980).
- Li + should have exerted much higher selection pressure on any organism living in the Dead Sea in contrast to other ions such as Na + , K + , Ca +"1" , Mg +4" .
- EhHog is highly likely the outcome of E. herbariorum's adaptation to the Dead Sea water with exceptionally high Li + content.
- EhHOG transformant also increased intracellular glycerol content during salt stress (Fig. 5). However, EhHOG did not improve salt tolerance in wild type S. cerevisiae (data not shown). These results suggest that EhHOG has similar function to Hogl in S. cerevisiae to regulate GPDl gene, a second gene involved in glycerol biosynthesis in S. cerevisiae (Erikksson et al., 1995).
- EhHOG was found to be involved in responses to generalized stresses, such as heat stress and oxidative stress, in S. cerevisiae (Winkler et al., 2002), in Schizosacharomyces pombe
- Yeast cells may cope with freeze-thaw stress by synthesis of stress protein (Komatsu et al., 1990) or metabolites such as trehalose and glycerol (Iwahashi et al., 1995; Lewis et al., 1995, 68).
- Trehalose stabilizes the intracellular water structure and cell membranes under stress conditions (Iwahashi et al., 1995). Freeze-thaw-tolerant yeast strains had higher levels of trehalose (Hino et al., 1990), indicating that trehalose is a possible protectant in freeze-thaw stress. Hence, EhHOG in the transformant possibly promoted the expression of genes involved in glycerol and trehalose synthesis, which produced higher levels of metabolites trehalose and glycerol synthesis in stress survival.
- EXAMPLE 4 Genetic transformation and molecular characterization of the EhHOG in transgenic tomatoes
- Cotyledon explants of the tomato cv P-73 are infected with Agrobacte ⁇ um tumefaciens carrying the EhHOG gene in the plasmid.
- Organogenic calli are selected on kanamycin-containing medium.
- PCR analysis of plants from independent calli are tested for the presence of the EhHOG gene.
- PCR positive plants are regenerated from independent calli and PCR negative plant is used as a control.
- the integration of different numbers of copies is tested by Southern analysis.
- Northern analysis for the EhHOG gene is done in order to test the presence of mRNA in the transgenic plants . After molecular characterization, progeny (TG2 and TG3) from a sample of primary transformants (TGl) are obtained and their seeds are used in further experiments. The expression of the EhHOG transgene is detected in these plants.
- GPDl 5 encodes glycerol-3 -phosphate dehydrogenase, is essential for growth under osmotic stress in Saccharomyces cerevisiae, and its expression is regulated by the high- osmolarity glycerol response pathway. MoI. Cell Biol. 14, 4135-4144.
- Banuett, F. (1998) Signalling in the yeasts: an informational cascade with links to the filamentous fungi. Microbiol. MoI. Biol. Rev. 62, 249-274. Bansal, P.K. & Mondal, A.K. (2000) Isolation and sequence of the HOGl homologue from Debaryomyces hansenii by complementation of the hogl delta strain of Saccharomyces cerevisiae. Yeast 16, 81-88.
- Barcelo P and Lazzeri PA 'Transformation of cereals by microprojectile bombardment of immature inflorescence and scutellum tissues', in Methods in Molecular Biology, H. Jones, ed. 1995, Humana Press Inc.: Totowa, New Jersey, USA. pp. 113-22.
- Floral dip a simplified method for Agrobacterium- mediated transformation of Arabidopsis thaliana. Plant J 16: 735-743(1998).
- Transformation of Arabidopsis thaliana with the codA gene for choline oxidase accumulation of glycine-betaine and enhanced tolerance to salt and cold stress. Plant J 12: 133-142.
- Wan Y and Lemaux PG Generation of large numbers of independently transformed fertile barley plants. Plant Physiology 104: 37-48 (1994).
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US60757304P | 2004-09-08 | 2004-09-08 | |
PCT/IL2005/000953 WO2006027779A1 (en) | 2004-09-08 | 2005-09-08 | Stress tolerant organisms expressing a map kinase homologue |
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EP (1) | EP1789545B1 (en) |
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US5859337A (en) * | 1995-06-06 | 1999-01-12 | The Regents Of The University Of California | Genes conferring salt tolerance and their uses |
CN1233833C (en) | 2002-04-05 | 2005-12-28 | 中国科学院植物研究所 | Method for breeding salt-resistant tomato utilizing atriplex hortensis BADH gene transfer |
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