EP1007106A1 - Combinatorial library - Google Patents

Combinatorial library

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Publication number
EP1007106A1
EP1007106A1 EP98940025A EP98940025A EP1007106A1 EP 1007106 A1 EP1007106 A1 EP 1007106A1 EP 98940025 A EP98940025 A EP 98940025A EP 98940025 A EP98940025 A EP 98940025A EP 1007106 A1 EP1007106 A1 EP 1007106A1
Authority
EP
European Patent Office
Prior art keywords
metal
group
mixture
polyamino
chelator
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP98940025A
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German (de)
French (fr)
Inventor
Alfred Pollak
John Thornback
David Roe
Ernest Wong
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Resolution Pharmaceuticals Inc
Original Assignee
Resolution Pharmaceuticals Inc
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Filing date
Publication date
Application filed by Resolution Pharmaceuticals Inc filed Critical Resolution Pharmaceuticals Inc
Publication of EP1007106A1 publication Critical patent/EP1007106A1/en
Withdrawn legal-status Critical Current

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Classifications

    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K51/00Preparations containing radioactive substances for use in therapy or testing in vivo
    • A61K51/02Preparations containing radioactive substances for use in therapy or testing in vivo characterised by the carrier, i.e. characterised by the agent or material covalently linked or complexing the radioactive nucleus
    • A61K51/04Organic compounds
    • A61K51/0491Sugars, nucleosides, nucleotides, oligonucleotides, nucleic acids, e.g. DNA, RNA, nucleic acid aptamers
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K49/00Preparations for testing in vivo
    • A61K49/06Nuclear magnetic resonance [NMR] contrast preparations; Magnetic resonance imaging [MRI] contrast preparations
    • A61K49/08Nuclear magnetic resonance [NMR] contrast preparations; Magnetic resonance imaging [MRI] contrast preparations characterised by the carrier
    • A61K49/085Nuclear magnetic resonance [NMR] contrast preparations; Magnetic resonance imaging [MRI] contrast preparations characterised by the carrier conjugated systems
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K49/00Preparations for testing in vivo
    • A61K49/06Nuclear magnetic resonance [NMR] contrast preparations; Magnetic resonance imaging [MRI] contrast preparations
    • A61K49/08Nuclear magnetic resonance [NMR] contrast preparations; Magnetic resonance imaging [MRI] contrast preparations characterised by the carrier
    • A61K49/10Organic compounds
    • A61K49/101Organic compounds the carrier being a complex-forming compound able to form MRI-active complexes with paramagnetic metals
    • A61K49/103Organic compounds the carrier being a complex-forming compound able to form MRI-active complexes with paramagnetic metals the complex-forming compound being acyclic, e.g. DTPA
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K49/00Preparations for testing in vivo
    • A61K49/06Nuclear magnetic resonance [NMR] contrast preparations; Magnetic resonance imaging [MRI] contrast preparations
    • A61K49/08Nuclear magnetic resonance [NMR] contrast preparations; Magnetic resonance imaging [MRI] contrast preparations characterised by the carrier
    • A61K49/10Organic compounds
    • A61K49/14Peptides, e.g. proteins
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K51/00Preparations containing radioactive substances for use in therapy or testing in vivo
    • A61K51/02Preparations containing radioactive substances for use in therapy or testing in vivo characterised by the carrier, i.e. characterised by the agent or material covalently linked or complexing the radioactive nucleus
    • A61K51/04Organic compounds
    • A61K51/0474Organic compounds complexes or complex-forming compounds, i.e. wherein a radioactive metal (e.g. 111In3+) is complexed or chelated by, e.g. a N2S2, N3S, NS3, N4 chelating group
    • A61K51/0478Organic compounds complexes or complex-forming compounds, i.e. wherein a radioactive metal (e.g. 111In3+) is complexed or chelated by, e.g. a N2S2, N3S, NS3, N4 chelating group complexes from non-cyclic ligands, e.g. EDTA, MAG3
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K51/00Preparations containing radioactive substances for use in therapy or testing in vivo
    • A61K51/02Preparations containing radioactive substances for use in therapy or testing in vivo characterised by the carrier, i.e. characterised by the agent or material covalently linked or complexing the radioactive nucleus
    • A61K51/04Organic compounds
    • A61K51/0497Organic compounds conjugates with a carrier being an organic compounds
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K51/00Preparations containing radioactive substances for use in therapy or testing in vivo
    • A61K51/02Preparations containing radioactive substances for use in therapy or testing in vivo characterised by the carrier, i.e. characterised by the agent or material covalently linked or complexing the radioactive nucleus
    • A61K51/04Organic compounds
    • A61K51/08Peptides, e.g. proteins, carriers being peptides, polyamino acids, proteins
    • A61K51/088Peptides, e.g. proteins, carriers being peptides, polyamino acids, proteins conjugates with carriers being peptides, polyamino acids or proteins
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K1/00General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
    • C07K1/04General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length on carriers
    • C07K1/047Simultaneous synthesis of different peptide species; Peptide libraries

Definitions

  • the present invention relates to a combinatorial library. More particularly, the present invention relates to a combinatorial library useful for identifying targeting molecules which bind to selected ligands.
  • contrasting agents that in binding or localizing a site selectively within the body, help to resolve the image of diagnostic interest.
  • 67 Gallium salts for example, have an affinity for tumours and infected tissue and, with the aid of scanning tomography, can reveal afflicted body regions to the physician.
  • Other contrasting agents include the metal radionuclides such as 99m technetium and 186188 rhenium, and these have been used to label targeting molecules, such as proteins, peptides and antibodies that localize at desired regions of the human body.
  • Metal ions such as Gd are useful in diagnostic imaging as contrasting agents in magnetic resonance imaging (MRI).
  • MRI magnetic resonance imaging
  • MRI is a currently used technique for the in vivo imaging of biological processes and offers non-ionizing radiation, modest magnetic fields, and is noninvasive. In addition, it offers superb spatial resolution (of the order of 1-3mm).
  • agents are used to improve the signal to noise ratio for the purpose of imaging designated areas or processes of the body. These are known as MRI contrast agents and have the potential to allow aquisition of data over shorter time periods and the ability to image regions that currently have poor image contrast.
  • Metal complexes have applications in the treatment, management or diagnosis of diseases. 1" 9 Examples include the use of Pt complexes in cancer therapy, 4"7 the use of Au complexes in rheumatoid arthritis therapy and the applications of Ga, In, Tc, Re, and Sm complexes in nuclear medicine. 3, 15"17
  • chelating agent Candidates for use as chelators are those compounds that bind tightly to the chosen metal radionuclide and also have a reactive functional group for conjugation with the targeting molecule.
  • Combinatorial chemistry is a methodology by which large numbers of compounds or libraries can be prepared and screened rapidly and concurrently in an efficient manner.
  • bifunctional chelators permits control of the type of metal coordination, the oxidation state of the coordinated metal, the stability and the conformation of the resulting metal complex.
  • a variety of bifunctional chelators are available. Examples of bifunctional chelators include polyamino polycarboxylates, polyamino polyphenolates, polyaza macrocycies with or without pendent coordination groups, tetradentate N X S 4 .
  • the present invention provides combinatorial library compounds which are effective for binding to a biological target in a rapid and cost effective manner, as well as a method of synthesizing the compounds
  • the present invention provides a combinatorial library of targeting agents that are labelled with a metal or radionuclide metal complexed to a chelating agent. A large number of labelled targeting agents can be quickly screened for their ability to bind to a biological target.
  • the present invention provides a combinatorial library of targeting compounds which have attached non-radioactive metal complexes which are isostructural with radiactive compounds for imaging applications or reactive Re complexes for radiotherapy.
  • a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (1):
  • A-(B) n -C (1) wherein: A is a chelator moiety capable of complexing a metal;
  • B is a spacer group; n is selected from the integers 0 and 1 ; and C comprises one of a plurality of potential targeting molecules.
  • a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (11):
  • W is selected from a group comprising: a) a metal binding moiety; b) a chelator moiety capable of binding a metal selected from polyamino polycarboxylates, polyamino polyphenolates, polyazamacrocycles with or without pendent coordination groups, tetradentate N x S 4 x ligands, polyamino polysulfides, polyamino polyphosphates, polyamino polyheterocyclics and derivatives or combinations of the above; c) a metal chelator of the general formula;
  • X is a linear or branched, saturated or unsaturated C ⁇ alkyl chain that is optionally interrupted by one or two heteroatoms selected from N, O, and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C,. 6 alkyl, aryl and C(O)Z;
  • Y is H or a substituent defined by X;
  • R 1 through R 4 are selected independently from H; carboxyl; C ⁇ alkyl; C ⁇ alkyl substituted with a group selected from hydroxyl, amino, sulfhydryl, halogen, carboxyl, C ⁇ alkoxycarbonyl and aminocarbonyl; an alpha carbon side chain of a D- or L- amino acid other than proline; and C(O)Z;
  • R 5 is selected from H and a sulphur protecting group; and T is carbonyl or CH 2 .
  • a metal chelator selected from N,N-dimethyglycine-ser- cys-gly or N,N-dimethylglycine-tertbutylglycine-cys-gly; and e) a chelator complexed to a metal or metal radionuclide;
  • X is a multiple chelator binding moiety capable of coupling to at least one metal binding moiety;
  • Y is a spacer group is selected from the integers 0 and 1 ;
  • Z comprises a mixture of potential targeting moieties; m is greater than or equal to 1; and n is selected from the integers 0 and 1.
  • A-(B) n -C (1) wherein: A is a chelator moiety capable of complexing a metal; B is a spacer group, n is selected from the integers 0 and 1 ; and
  • C comprises one of a plurality of potential targeting molecules, comprising of the steps of:
  • a method for the synthesis of a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (1):
  • A-(B) n -C (1) wherein: A is a chelator moiety capable of complexing a metal; B is a spacer group; n is selected from the integers 0 and 1 ; and C comprises one of a plurality of potential targeting molecules, comprising the steps of: I) Preparing a mixture of potential targeting molecules using combinatorial synthesis; and
  • a method of obtaining a compound having a desired targeting property comprising the steps of:
  • A-(B) n -C (1) wherein: A is a chelator complexed to a metal or metal nuclide B is a spacer group n is selected from the integers 0 and 1 C is one of a plurality of potential targeting molecules; and
  • a method of obtaining a labeled compound for the purposes of diagnostic imaging having a desired targeting property comprising the steps of: (1) providing one or more sets of mixtures which comprise a mixture of candidate compounds of formula (1):
  • A-(B) n -C (1) wherein: A is a chelator complexed to a metal or metal nuclide B is a spacer group n is selected from the integers 0 and 1 C is one of a plurality of potential targeting molecules; and (11 ) selecting from among the set of candidate compounds a compound having the desired property by exposing the mixture of candidate compounds to a substance to which the compound having the desired targeting property will preferentially bind.
  • a method of obtaining a labeled compound for the purposes of therapy or radiotherapy having a desired targeting property comprising the steps of;
  • A is a chelator complexed to a metal or metal nuclide B is a spacer group n is selected from the integers 0 and 1 ;
  • C is one of a plurality of potential targeting molecules
  • a method of obtaining a compound having a desired targeting property comprising the steps of;
  • X is a multiple chelator binding moiety capable of coupling to at least one metal binding moiety
  • Y is a spacer group is selected from the integers 0 and 1 ;
  • Z comprises a mixture of potential targeting moieties m is greater than or equal to 1 ; and n is selected from the integers 0 and 1 ; and (11) selecting from among the set of compounds a compound having the desired targeting property by exposing the mixture of compounds to a substance to which the compound having a desired targeting property will preferentially bind.
  • a method of obtaining a molecule having a desired targeting property comprising the steps of:
  • A is a chelator complexed to a non-radioactive metal which is isostructural with an analogous complex of a radioactive metal
  • B is a spacer group n is selected from the integers 0 and 1 ; and C is one of a plurality of potential targeting molecules;
  • A is a chelator complexed to a non-radioactive metal which is isostructural with an analogous complex of a radioactive metal
  • B is a spacer group
  • n is selected from the integers 0 and 1 ;
  • C is one of a plurality of potential targeting molecules; comprising the steps of:
  • a method for the synthesis of a library comprising one or more sets of compounds comprising the steps of:
  • the invention provides an iterative approach of library synthesis followed by biological testing and subsequent deconvolution to provide final compounds.
  • a moderately sized focused library of non-radioactive rhenium compounds is prepared as mixtures of up to 25 compounds.
  • a large library of rhenium targeting moiety conjugates is delivered as equimolar mixtures of 9-25 compounds in 96 well microtiter plates (1mg/well) for in vitro testing. These are then tested in the relevant assays and the most promising mixtures are segregated for deconvolution.
  • a second round of testing may then be undertaken using a smaller subset of the rhenium containing molecules together with a second set of biological tests to further reduce the number of molecules.
  • the final iteration will provide a series of discrete compounds as both the rhenium complex and a free chelate ready for labeling with radioactive 99m technetium which is isostructural to the non-radioactive rhenium isotope used.
  • the potential imaging lead candidates (preferably about 10 compounds) are delivered as pure chelator targeting moiety conjugates for radiolabe ng development in in vivo studies. This process provides labeled compounds that are effective for binding a biological target in a rapid and cost effective manner.
  • the targeting moiety of the present invention is a molecule that can selectively deliver a chelated metal or radionuclide or MRI contrasting agent to a desired location in a mammal.
  • Preferred targeting molecules selectively target cellular receptors, transport systems, enzymes, glycoproteins and processes such as fluid pooling.
  • Examples of targeting molecules suitable for coupling to the chelator include, but are not limited to: steroids, proteins, peptides, antibodies, nucleotides and saccharides.
  • Preferred targeting molecules include proteins and peptides, particularly those capable of binding with specificity to cell surface receptors characteristic of a particular pathology. For instance, disease states associated with over-expression of particular protein receptors can be imaged by labeling that protein or a receptor binding fragment thereof coupled to a suitable chelator.
  • targeting molecules are peptides capable of specifically binding to target sites and have three or more amino acid residues.
  • the targeting moiety can be synthesized either on a solid support or in solution and is coupled to the next portion of the chelator-targeting moiety conjugates using known chemistry.
  • the second portion of the molecule serves the purpose of separating the targeting portion from the imaging portion of the conjugate.
  • a multiple chelator coupling unit is attached to the targeting moiety (optionally via a linker subunit).
  • This is of oligomeric or dendrimeric construction and is capable of coupling multiple chelator units to the conjugate.
  • this multiple chelator coupling unit is a dendrimer containing a functionality to which suitable chelators can be attached.
  • the multiple chelator coupling unit is a branched lysine dendrimer.
  • the metal chelators used for the purposes of the present invention have the following general formula:
  • X is a linear or branched, saturated or unsaturated C ⁇ alkyl chain that is optionally interrupted by one or two heteroatoms selected from N,
  • O.and S is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C 1 6 alkyl, aryl and C(O)Z;
  • Y is H or a substituent defined by X
  • Z is the position of attachment for the targeting portion of the library
  • R 1 through R 4 are selected independently from H; carboxyl; C, ⁇ alkyl;
  • R 5 is selected from H and a sulphur protecting group
  • T is carbonyl or CH 2
  • the complex has the following general formula:
  • X is a linear or branched, saturated or unsaturated C.,. 6 alkyl chain that is optionally interrupted by one or two heteroatoms selected from N, O, and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C 1 6 alkyl, aryl and C(O)Z;
  • Y is H or a substituent defined by X
  • Z is the position of attachment for the targeting portion of the library
  • R 1 through R 4 are selected independently from H; carboxyl; C, ⁇ alkyl;
  • T is carbonyl or CH 2 ;
  • RP414 and RP455 The preferred chelators for 99m technetium radiopharmaceuticals are RP414 and RP455.
  • the structures of RP414 and RP455 are as follows:
  • R C(CH 3 ) 3 RP455
  • Re and Tc complexes of these chelators are isostructural. Also, these chelators are advantageous because the chemistry of these compounds is well understood and they form neutral Re and 99 Tc complexes. It is possible to label these chelators with Re or 99m Tc in one easy step. In addition these chelators have the advantage of being applicable for conjugation to a variety of targeting molecules, being compatible with solid phase synthesis.
  • Labeling of RP414 with 99m Tc can be carried out either at ambient or elevated temperature, rapidly, and with quantities of chelator approaching stoichiometric amounts.
  • the complex is stable to both acidic and basic conditions and remains unchanged in-vivo.
  • chelators may be used to carry out the invention.
  • the invention is not limited to the preferred chelators listed above.
  • the chelator comprises a functionality chosen from the known Gd chelators and is attached to the remainder of the conjugate by either solid phase or solution chemistry.
  • N-methylpyrrolidone, dimethylformamide, 2-(1 H- benzotriazol-1-yl)-1 ,1 ,3,3-tetramethyl-uronium hexafluorophosphate, 1- hydroxybenzotriazole, diisopropylethyl-amine, dichloromethane and trifluoroacetic acid were purchased from Applied Biosystems Inc.
  • Triethylamine and terf-butyl methyl ether were purchased from Aldrich Chemical Inc.
  • Fmoc amino acids and Sasrin resin were purchased from Bachem Bioscience Inc. All chemicals were used as received.
  • the mobile phase was changed from 100% 0.1 % aqueous trifluoroacetic acid to 100% acetonitrile containing 0.1 % trifluoroacetic acid over 20 minutes at a flow rate of 2 mL/min.
  • the HPLC analyses of the RP487 peptide mixture and the Re complexes of the peptide mixture were performed by changing the mobile phase from 100% 0.1% aqueous trifluoroacetic acid to 60% acetonitrile containing 0.1% trifluoroacetic acid over 20 minutes at a flow rate of 2 mL/min. All HPLC analyses were monitored with a UV detector set at 215 and 254 nm.
  • Solid phase peptide syntheses were performed on an ABI Peptide Synthesizer model 433A using FastMoc chemistry and sasrin resin (User" Manual of Peptide Synthesizer Model 433A, Applied BioSystems, Philadelphia, 1993).
  • a set of potentially receptor specific structurally distinct molecules are placed on a solid support.
  • a bifunctional chelator such as dimethylglycine-serine-cysteine-glycine is attached to the library of molecules using tetrafluorophenol and 1-[3-(dimethylamino)-propyl]3-ethylcarbodiimide chloride.
  • the resulting solid phase library is then heated in a solution of ReOCI 3 (PPh 3 ) 2 or [ReO 2 (en) 2 ]CI to produce a library of Re complexes.
  • the library of 99m Tc complexes can be prepared by reacting the library with pertechnetate in the presence of tin (II) chloride and sodium gluconate.
  • the library of Re and 99m Tc complexes can be prepared by reacting the set of potentially receptor specific molecules with the tetrafluorophenol esters of Re and Tc dimethglycine-serine-cysteine-glycine complexes.
  • the libraries of Re and 99m Tc complexes are then cleaved off the solid support and evaluated in biological assay or in imaging studies.
  • Example 2 Synthesis of Gd complex as a receptor specific MRI contrasting agent.
  • a series of potentially receptor specific structurally distinct molecules are attached to solid phase support.
  • the chelator diethylenetriaminetetraacetic acid (DTPA) is attached to the set of potentially receptor specific molecules.
  • the resulting solid phase library is then placed in a solution of Gd acetate to produce a solid phase library of potentially receptor specific Gd complexes.
  • the Gd is coordinated to the DTPA chelator.
  • the library of Gd complexes is then cleaved off the solid support and evaluated in a biological assay.
  • Example 3 Development of a magnetic resonance imaging agent.
  • Some current attempts to produce efficient relaxation have resulted in the preparation of molecules having a number of gadolinium chelator molecules attached to one targeting molecule, often by way of a linker moiety to allow space between the target and the chelation parts of the molecule 37 39 .
  • the molecule can be divided into four parts; the targeting moiety, an optional suitable linker, a multiple chelator coupling unit capable of coupling multiple chelator moieties, and the chelator moieties coupled to the multiple chelator coupling unit.
  • the targeting moiety is a molecule that can selectively deliver a chelated radionuclide or MRI contrasting agent to a desired location in a mammal.
  • the second portion of the molecule, the optional linker, serves the purpose of separating the targeting portion from the imaging portion of the conjugate.
  • a multiple chelator coupling unit is attached to the targeting moiety (optionally via a linker subunit).
  • This is of oligomeric or dendrimeric construction and is capable of coupling multiple chelator units to the conjugate.
  • this multiple chelator coupling unit is a dendrimer containing a functionality to which suitable chelators can be attached.
  • the multiple chelator coupling unit is a branched lysine dendrimer.
  • the final portion of the conjugate will consist of the chelator units. This comprises a functionailty chosen from the known Gd chelators and is attached to the remainder of the conjugate by either solid phase or solution chemistry.
  • mixtures of compounds in any or all of the above subsections of the agent are prepared.
  • preparation of a combination of libraries having a mixture in one of the sections, together with a series of related libraries produced by the alteration of the previous or subsequent parts of the agent is carried out in a parallel fashion.
  • a library of targeting molecules would be split and each part attached to a single linker- dendrimer-chelator subunit.
  • Such a route provides a parallel series of libraries each having a single linker-dendrimer-chelator unit in order to optimize the targeting of the molecules.
  • Producing a mixture of compounds based on the dendrimer and single targeting-linker and chelator units allows for variation of the relaxivity of the system.
  • Peptides of various amino acid sequences and with varying side chain protection groups were prepared via a solid phase peptide synthesis method on an automated peptide synthesizer using FastMoc 1.0 mmole chemistry.
  • 3 Preloaded Fmoc amino acid sasrin resin and Fmoc amino acid derivatives were used.
  • the FMOC group Prior to the addition of each amino acid residue to the N-terminus of the peptide chain, the FMOC group was removed with 20% piperidine in NMP.
  • Each Fmoc amino acid residue was activated with 0.50 M HBTU/ HOBt/ DMF, in the presence of 2.0M DIEA/ NMP.
  • the C-terminus of the completed peptide was attached to the resin via the sasrin linker.
  • the peptidyi resin was washed with dichloromethane and dried under vacuum for 20-24 hours. This method was used to prepare the following peptidyi resin of varying amino acid sequences containing side chain protection groups:
  • Example 5 Synthesis of RP487 peptide mixture-resin, Dimethylgly-Ser(O e -Trt)- Cys(S e -Mott)-Gly-X-Tyr(O e -f-bu)-Gly-Z-Gly-[resin] (where X are Leu, Arg(N e - Pmc) or Phe and Z are Lys(N e -Boc), Ser(O e -Trt) or Tyr(O e -f-bu)).
  • the synthesis of the RP487 peptide mixture resin was performed using FastMoc 0.25 mmol chemistry on an automated synthesizer.
  • 35 Fmoc-Gly sasrin- resin (0.7 mmol/ g, 0.25 mmol, 357 mg) was placed in the reaction vessel.
  • Amino acid cartridges 2, 3, 5, 6, and 7 counted from the C-terminus contained 1 mmol of each Fmoc amino acid derivatives, Gly, Tyr(O -Bu), Gly, Cys(S e -Mott), and Ser(O e -Trt), respectively.
  • Cartridge 1 had Fmoc amino acid derivatives of Lys(N e - Boc), Ser(O e -Trt), and Tyr(O -Bu) (0.33 mmol / amino acid). Meanwhile, cartridge 4 carried Fmoc amino acids of Arg(N e -Pmc), Leu, and Phe (0.33 mmol/ amino acid).
  • N,N-Dimethylglycine (1mmol) in cartridge 8 was pre-treated with 0.50 M HBTU/ HOBt/ DMF (0.8 mL) before it was inserted on the synthesizer. After completion of the automatic synthesis, the resulting product was removed from the synthesizer, and dried under vacuum for 2 hours to afford the titled RP487 peptide mixture-resin (610 mg).
  • Example 6 Synthesis of RP487 peptide mixture, Dimethylgly-Ser-Cys-Gly- - Tyr-Gly-Z-Gly (where X is Leu, Arg or Phe and Z is Lys, Ser or Tyr).
  • the RP487 peptide mixture-resin 120 mg, 0.05 mmol was added to a cleavage composition of 82.5% TFA/ 5% phenol/ 5% thioanisole/ 2.5% 1 ,2-ethane dithiol/ 5% mili-Q water (1 mL) at 0 °C. 36
  • the reaction suspension was then stirred at room temperature for 5 hours.
  • the cleavage suspension was filtered by vacuum after 5 hours, and the filtrate was allowed to add in cold .erf-butyl methyl ether (20 mL) at 5°C.
  • the precipitated residue was subsequently washed with tetf-butyl methyl ether (2 x 30 mL).
  • ReOCI 3 (PPh 3 ) 2 (0.3793 g, 0.000456 moles) and 1 mL of triethylamine were added to the NMP resin mixture.
  • the ReOCI 3 (PPh 3 ) 2 dissolved to give a purple mixture.
  • the mixture was heated at 40-50 °C for 4 hours.
  • the resin was then collected by vacuum filtration.
  • the resin was washed with 3 x 10 mL NMP, followed by 3 x 10 mL CH 2 CI 2 .
  • the resin was dried under vacuum overnight.
  • the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 4 hours. The resin was removed by vacuum filtration and the supernatant was added dropwise to tetf-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. The syn and anti isomers of the Re complex were observed in the HPLC chromatogram. This is consistent with other known Re complexes with N 4.X S X chelators.
  • Example 8 Synthesis of Re oxo complex of Dimethylgly-Ser-Cys-Gly using RP443-resin.
  • RP443-resin (0.1621 g) was swollen in 3 mL of NMP.
  • ReOCI 3 (PPh 3 ) 2 (0.4023 g, 0.000483 moles) and 1 mL of triethylamine were added to the NMP resin mixture.
  • the ReOCI 3 (PPh 3 ) 2 dissolved to give a purple mixture.
  • the mixture was heated at 40-50 °C for 4 hours.
  • the resin was then collected by vacuum filtration.
  • the resin was washed with 3 x 10 mL NMP, followed by 3 x 10 mL CH 2 CI 2 .
  • the resin was dried under vacuum overnight.
  • the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 4 hours. The resin was removed by vacuum filtration and the supernatant was added dropwise to terf-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. The syn and anti isomers of the Re complex was observed in the HPLC chromatogram. The coordination of the peptide to the Re metal caused the displacement of the cysteine sulfur trityl protection group but did not cause the peptide to be cleaved off the resin.
  • Example 9 Synthesis of Re oxo complex of Dimethylgly-Ser-Cys-Gly-Thr-Lys- Pro-Pro-Arg using RP441 -resin.
  • RP441-resin (0.0799 g) was swollen in 3 mL of NMP.
  • ReOCI 3 (PPh 3 ) 2 (0.3983 g, 0.000478 moles) and 1 mL of triethylamine were added to the NMP resin mixture.
  • the ReOCI 3 (PPh 3 ) 2 dissolved to give a purple mixture.
  • the mixture was heated at 40-50 °C for 8 hours.
  • the resin was then collected by vacuum filtration.
  • the resin was washed with 3 x 10 mL NMP, followed by 3 x 10 mL CH 2 CI 2 .
  • the resin was dried under vacuum overnight.
  • the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 4 hours. The resin was removed by vacuum filtration and the supernatant was added dropwise to ter-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. The syn and anti isomers of the Re complex were observed in the HPLC chromatogram. The coordination of the peptide to the Re metal caused the displacement of the cysteine sulfur trityl protection group but did not cause the peptide to be cleaved off the resin.
  • Example 11 Synthesis of Re oxo complex of Dimethylgly-Ser-Cys-Gly-Gly-Lys- Lys-Leu-Leu-Lys-Lys-Leu-Lys-Lys-Leu-Leu-Lys-Lys-Leu-NH 2 using RP478- resin.
  • the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 8 hours. The resin was removed by vacuum filtration and the supernatant was added dropwise to tetf-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. The syn and anti isomers of the Re complex was observed in the HPLC chromatogram. The coordination of the peptide to the Re metal caused the displacement of the cysteine sulfur trityl protection group but did not cause the peptide to be cleaved off the resin.
  • Example 12 Synthesis of Re oxo complex of Dimethyigly-Ser-Cys-Gly- -Tyr- Gly-Z-Gly (where X is Leu, Arg or Phe and Z is Lys, Ser or Tyr) using RP487- resin.
  • ReOCI 3 (PPh 3 ) 2 (0.9210 g, 0.00111 moles) and 1 mL of triethylamine were added to the NMP resin mixture.
  • the ReOCI 3 (PPh 3 ) 2 dissolved to give a purple mixture.
  • the mixture was heated at 40-50 °C for 12 hours.
  • the resin was then collected by vacuum filtration.
  • the resin was washed with 3 x 10 mL NMP, followed by 3 x 10 mL CH 2 CI 2 .
  • the resin was dried under vacuum overnight.
  • the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 4 hours. The resin was removed by. vacuum filtration and the supernatant was added dropwise to tetf-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. Since the Re complex of each peptide sequence exists as the syn and anti isomers, the total number of compounds prepared was 18.
  • Example 13 Synthesis of Re oxo complex of Dimethylgly-Ser-Cys-Gly-X-Tyr- Gly-Z-Gly (where X are Leu, Arg or Phe and Z are Lys, Ser or Tyr) in aqueous solution.
  • Example 14 Use of multiple discrete loaded resins in one reactor vessel to provide a combinatorial library
  • the various peptide sequences containing varying side chain protecting groups in these examples were synthesized via a solid phase synthesis method on an automated synthesizer using FastMoc chemistry on scales varying from 0.1 to I .Ommol.
  • the FMOC group Prior to the addition of each amino acid residue to the N-terminus of the peptide chain the FMOC group was removed with 20% piperidine in NMP. Each FMOC amino acid was activated with 0.5M HOBT/HBTU/DMF in the presence of 2.0M DIEA/NMP. The C-terminus was attached to the solid phase via the sasrin linker. After completion of the synthesis the resin was washed with NMP followed by dichloromethane and dried under vacuum for up to 24 hours.
  • Example 15 Synthesis of a library of peptides on solid phase having the sequence Dimethylglycine-Ser(O-Trt)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z-Y (Where X is Leu, Arg(N-Pmc), or Phe, Z is Lys(N-Boc), Ser(O-Trt), or Tyr(o_t- Bu), and Y is Gly, Phe, Leu, Arg(N-Pmc), or Lys(N-Boc))
  • the reactor vessels employed in the peptide synthesizer were loaded with a mixture of 5 MicroKans (supplied by IRORI ) each containing 30mg of Tenta gel TGA resin having the following amino acids preloaded; glycine, Phenylalanine, Leucine, Arginine, Lysine. This mixture was then subjected to the conditions described above to synthesize the following amino acid sequence onto each of the resins;
  • RPLIB6G-resin Dimethylgly-ser(O-t-bu)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z- Gly-Resin
  • RPLIB6F-resin Dimethylgly-ser(O-t-bu)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z- Phe-Resin
  • RPLIB6K-resin Dimethylgly-ser(O-t-bu)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z- Lys-Resin
  • X consists of a mixture of FMOC amino acid derivatives of Leu, Arg (N-Pmc), or Phe
  • Z consists of a mixture of FMOC amino acid derivatives of Lys(N-boc), Ser(O-trt) or Tyr(O-t-Bu).
  • Example 16 Synthesis of a series of peptides having the sequence Dimethylglycine-Ser-Cys-Gly-X-Tyr-Gly-Z-Y (Where X is Leu, Arg, or Phe, Z is Lys, Ser, or Tyr, and Y is Gly, Phe, Leu, Arg, or Lys)
  • N-terminal amine of the above peptide attached to sasrin resin (100mg) is deprotected of its Fmoc group under standard Fmoc deprotection conditions.
  • the amine is then capped with a suitably reactive reagent (see list below).
  • the resin is placed in a solution of NMP (500uL) for the resin to swell.
  • DIEA 25uL, 2M
  • one of the capping agents O. ⁇ mmol
  • the capped peptide is removed from the resin by shaking in the presence of 95% Trifluoroacetic acid (0.5-1 mL) at room temperature for 4 hours. After the cleavage is complete the resin is filtered off and then washed with further trifluoroacetic acid (0.5mL). The combined trifluoroacetic acid solutions are then combined and concentrated under reduced pressure.
  • the capped peptide is then purified by reverse phase HPLC on C18 silica gel using a gradient of 0-100% acetonitrile in water over a period of 20 mins The cuts containing the relevant compound are then lyophilized and the peptide analyzed by electrospray mass spectroseopy. The peptides display the properties shown in the table below.
  • a list of the amine capping agents includes but is not limited to:
  • Example 18 Synthesis of a library of 324 potential chemotactic peptides using a combination of parallel synthesis and split and mix technologies
  • the various peptide sequences (that is the sequence Gly-Lys(DDE)-(mixture A,B,C)-(mixture D,E,F)-Phe-Leu-Nle-NH 2 and numbered RP552 through RP557) containing varying side chain protecting groups in these examples were synthesised via a solid phase synthesis method on an automated synthesizer using FastMoc chemistry on 1.0 mmol scale.
  • the FMOC group Prior to the addition of each amino acid residue (or mixture of acids as described above) to the N-terminus of the peptide chain the FMOC group was removed with 20% piperidine in NMP. Each FMOC amino acid was activated with 0.5M HOBT/HBTU/DMF in the presence of 2.0M DIEA/NMP.
  • the C-terminus was attached to the solid phase via the sasrin linker. After completion of the synthesis the resin was washed with NMP followed by dichloromethane and dried under vacuum for up to 24 hours. Where mixture of amino acids were employed the three amino acids were added as equimolar mixtures of suitably side chain protected FMOC acid residues in a single coupling step and otherwise treated as a single amino acid residue.
  • each mixture of 9 compounds is deprotected of its Fmoc group under standard fmoc deprotection conditions.
  • the amine is then capped with a suitably reactive reagent (see list).
  • Each microkan is placed in a solution of NMP (500uL) for the resin to swell.
  • DIEA 25uL, 2M
  • one of the capping agents O. ⁇ mmol.
  • the reaction is shaken for 2 to 18 hours at room temperature. Completion of the capping was confirmed by treatment of a small portion of the resin with 3% ninhydrin-EtOH. Lack of blue/purple colour indicated a complete reaction.
  • the reaction is filtered and the resin is washed with NMP (3x5mL) then dichloromethane (3x ⁇ mL) and the resin is dried in vacuo.
  • Each of the peptides was liberated from the support in 9 ⁇ % TFA: 5% water (1mL) after 4 hours shaking at room temperature, followed by filtration. The products were concentrated in vacuo. The residue was redissolved in trifluoroacetic acid (150uL) and dripped into t-butyl-methyl ether ( ⁇ mL) to precipitate. Each was centrifuged to a pellet, the solvent decanted and the pellets dried in vacuo. The products were dissolved in water and acetontrile ( ⁇ mL) and lyophilized to pale beige powders.
  • Example 20 Routes for the introduction of the rhenium complexes to each mixture (RP552-557)
  • lysine side chain first be deprotected and one of the chelators (RP414 or RP4 ⁇ ) be attached to the sequence as a single residue or stepwise.
  • chelators RP414 or RP4 ⁇
  • the cysteine residue must be sulphur protected with a labile group which is lost 3 ⁇
  • the column was first washed with a 5% acetonitrile: 9 ⁇ % water solution acidified to pH2 with 3N HCI.
  • the product was eluted in a 60% acetonitrile: 60% water solution acidified to pH2 with 3N HCI.
  • the appropriate pure fractions were identified by silica TLC (t-butanol:water:methanol, 10:3:2, rf: 0.8 ⁇ ) followed by KMnO 4 staining.
  • the correct fractions were pooled and 0 concentrated in vacuo to a red-brown glass (58mg, % yield).
  • ReO- 0 Dimethylglycine-t-butyl-glycine-S-Acetamidomethyl-Cysteine-Glycine(ReO-RP4 ⁇ ) tetrafluorophenyi ester (10mg) in ethyl acetate (1 mL).
  • the reactions were capped and shaken 20 hours at room temperature, followed by filtration, washing with copious ethyl acetate, N-methylpyrrolidone, dichloromethane. The red-brown resins were dried in vacuo. ⁇
  • Example 2 ⁇ Deconvolution of Peptide Mixture ReORP552 with N-terminus capping goups attached.
  • Resin-gly-lys(DDE)-lys-tyr-phe-leu-Nle Each of the following resins containing the peptides was then capped with a cyclopropylcarbonyl group as follows: Each resin is placed in a solution of NMP (500uL) for the resin to swell. To this solution is added DIEA (2 ⁇ uL, 2M) and cyclopropane carbonyl chloride (O. ⁇ mmol). The reaction is shaken for 18 hours at room temperature. The reaction is filtered and the resin is washed with NMP (3x ⁇ mL) then dichloromethane (3x ⁇ mL) and the resin is dried in vacuo. Completion of the reaction is ensured by the use of a ninhydrin test to indicate complete reaction of amino groups.
  • the rhenium complex was introduced as follows: The Dde epsilon amino group protection on C-terminus Lysine was first removed with three, five minute washes of 2% hydrazine in N-methylpyrrolidone (3x1 mL). The resin was ⁇ then thoroughly washed with N-methylpyrrolidone then dichloromethane, and dried in vacuo.
  • the rhenium complex was liberated from the resin using 9 ⁇ % trifluoroacetic acid (600 L) for 1. ⁇ h at room temperature. Filtration of the solution and removal of the trifluoroacetic acid under reduced pressure gave glycyl-lysine( -Re ⁇ oxo Dimethylglycyl-t-Butylglycyl-cysteinyl-glycyl)-N-(4-phenylpiperazin-1 - ylacetamide):ESMS 963 (M+H + ), expected 963.
  • the resin was dried on the aspirator and then cleaved with 9 ⁇ % trifluoroacetic acid in water (3 hours).
  • the trifluoroacetic acid/peptide solution was filtered into tert-butyl methyl ether (10 mL) and centrifuged. The ether was decanted. This washing process was repeated 3 times. After the final wash the ether was decanted leaving behind the peptide which had precipitated.
  • the peptide was dissolved in water (1 mL), frozen with liquid nitrogen ⁇ and lyophilized.
  • Example 30 Construction of a solid phase library of 1,000 metallocarbohydrates for use as imaging agents
  • R represents diversity groups as outlined in the procedure
  • This solid phase library is then treated with 20% piperidine in NMP to remove the Fmoc group from the C-2 amino functionality and the resulting resin treated with a solution of ReO-N,N,-dimethylglycine-ser-cys-gly-tetrafluorophenyl ester to provide the solid phase library.
  • This library is then liberated from the solid support by treatment with 50% TFA in dichloromethane. Removal of the TFA and dichloromethane under vacuum followed by lyophilisation provides the metaliocarbohydrate library.
  • Sprague-Dawley rats weighing 300-350 g were purchased from Charles River-Bausch & Lomb Laboratories (St.Constant, Quebec).
  • BOC-MLP BOC-MLP
  • cytochalasin B oyster shell glycogen
  • polyethyienimine polyethyienimine
  • OPD o- ⁇ phenylenediamine
  • H 2 0 2 and H 2 SO 4 Sigma Chemical Corp., St. Louis, MO
  • 3 H-fMLP New England Nuclear, Boston, MA
  • Peptide fMLP derivatives, N- formyl-norleucyl — tyrosyl-lysine (For-Nle-LP-Nle-YK) and iso-boc-MLFK were synthesized in-house by Resolution Pharmaceuticals Inc. (Mississauga, ON).
  • HBSS- Hanks' buffered salt solution
  • EDTA ethylene-diaminetetra-acetic acid
  • Neutrophil fMLP receptor binding assays Neutrophil fMLP receptor binding assays. fMLP saturation binding experiments used to determine K D values were carried out with 2.6 X 10 5 PMNs per sample suspended in a final volume of 160 uL of fMLP, 3 H-fMLP and/or HBSS+. Samples were done in quadruplicate and non-specific binding was assessed in the presence of 10 uM fMLP and 3 H-fMLP in the range of 1 nM to 160 nM. Total binding was evaluated following the addition of 3 H-fMLP in the concentration range of 1 nM to 150 nM.
  • Competition assays were conducted with 6 nM 3 H-fMLP in addition to the nonradioactive competing ligand added at 10 uM and 1.0 uM. Total binding in the competition assays was assessed in the presence of 1.0 x 10 6 PMNs per sample while non-specific binding was determined in the absence of cells.
  • library RP ⁇ 3-capped-17 was selected for further deconvolution.

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Abstract

Provided herein are combinatorial libraries containing compounds of formula (1): A-(B)n-C, wherein: A is a chelator complexed to metal or radionuclide metal; B is a spacer group; n is selected from the integers 0 and 1; and C comprises a mixture of potential targeting molecules. These libraries are useful in identifying labelled compounds which exhibit a desired targeting activity.

Description

Combinatorial Library
Field of the Invention
The present invention relates to a combinatorial library. More particularly, the present invention relates to a combinatorial library useful for identifying targeting molecules which bind to selected ligands.
Background to the Invention
The art of diagnostic imaging exploits contrasting agents that in binding or localizing a site selectively within the body, help to resolve the image of diagnostic interest. 67Gallium salts, for example, have an affinity for tumours and infected tissue and, with the aid of scanning tomography, can reveal afflicted body regions to the physician. Other contrasting agents include the metal radionuclides such as 99mtechnetium and 186188rhenium, and these have been used to label targeting molecules, such as proteins, peptides and antibodies that localize at desired regions of the human body.
Metal ions such as Gd are useful in diagnostic imaging as contrasting agents in magnetic resonance imaging (MRI). MRI is a currently used technique for the in vivo imaging of biological processes and offers non-ionizing radiation, modest magnetic fields, and is noninvasive. In addition, it offers superb spatial resolution (of the order of 1-3mm). In order to enhance the sometimes weak signals of MRI contrasting agents, such as Gd, agents are used to improve the signal to noise ratio for the purpose of imaging designated areas or processes of the body. These are known as MRI contrast agents and have the potential to allow aquisition of data over shorter time periods and the ability to image regions that currently have poor image contrast.
Metal complexes have applications in the treatment, management or diagnosis of diseases.1" 9 Examples include the use of Pt complexes in cancer therapy,4"7 the use of Au complexes in rheumatoid arthritis therapy and the applications of Ga, In, Tc, Re, and Sm complexes in nuclear medicine.3, 15"17
Previously, difficulties have been encountered in attaching diagnostically useful metals and radionuclide metals to targeting agents. Targeting agents such as proteins and other macromolecules can offer the tissue specificity required for diagnostic accuracy. However, labeling of these agents with metal radionuclides is made difficult by their physical structure. Particularly, protein and peptide targeting agents present numerous sites at which radionuclide binding can occur, resulting in a product that is labeled heterogeneously. Also, and despite their possibly large size, proteins rarely present the structural configuration most appropriate for high affinity radionuclide binding, i.e. a region incorporating four or more donor atoms that form five-membered rings. As a result, radionuclides are bound typically at the more abundant low-affinity sites, forming unstable complexes.
We have found that a promising alternative to the direct labeling of targeting agents is an indirect approach, in which targeting agent and radionuclide are coupled using a chelating agent. Candidates for use as chelators are those compounds that bind tightly to the chosen metal radionuclide and also have a reactive functional group for conjugation with the targeting molecule.
However, it is difficult to identify suitable targeting agents that retain their targeting ability when coupled to a chelator complexed with a metal or a radionuclide metal. A major problem affecting radiopharmaceutical development arises from difficulties in incorporating diagnostically useful metal complexes such as 99mtechnetium complexes into a targeting molecule without drastically reducing the affinity of the targeting molecule for the receptor and adequate pharmacokinetics. With targeting molecules that are small peptides or small organic compounds, the addition of a chelated metal compound can double the molecular weight of the overall radiopharmaceutical and thereby radically alter the ability of the molecule to bind the receptor with comparable affinity. To identify suitable labeled targeting agents according to the traditional approach, it is necessary to screen thousands of compounds in biological assays to provide a lead compound having the desired biological activity. This initial lead compound is then optimized to provide an agent having improved pharmacological properties. This approach is very time consuming and expensive.
The problems inherent in the traditional approach have been overcome for the development of some pharmaceuticals through the use of combinatorial chemistry.
Combinatorial chemistry is a methodology by which large numbers of compounds or libraries can be prepared and screened rapidly and concurrently in an efficient manner.
While the use of combinatorial library techniques has been applied to the development of drugs that are organic molecules, it has never been applied to the development of metallodrugs. This is most likely due to the greater considerations involved in the chemistry of metallodrugs. In addition to the usual considerations, the oxidation state and the coordination chemistry of the metal, and the stability of the resulting metal complexes must also be considered when combinatorial library techniques are applied to metallodrug development As the combinatorial library consists of a series of metal complexes, the site of metal coordination is of great importance. This site of metal coordination may be incorporated as part of the whole molecule or as a separate group or entity attached to the biologically active component of the molecule. In either case, the site of coordination affects the oxidation state of the metal, and vice versa. As the library of molecules will be evaluated in solution, the metal complexes must also resist decomplexation when they are cleaved from the solid support.
Attempts to overcome these problems have been made through the attachment of bifunctional chelators to moieties of potential biological activities. The use of bifunctional chelators permits control of the type of metal coordination, the oxidation state of the coordinated metal, the stability and the conformation of the resulting metal complex. A variety of bifunctional chelators are available. Examples of bifunctional chelators include polyamino polycarboxylates, polyamino polyphenolates, polyaza macrocycies with or without pendent coordination groups, tetradentate NXS4.X ligands, polyamino polyphosphates, polyamino polysulphides, polyamino polyheterocyc cs and derivatives or combinations of the above mentioned chelators.22"24 A number of techniques have been developed for attaching chelators to molecules of interest.25"32
However, problems in attaching stable metal complexes have not been adequately overcome because of the inability to produce chelators that provide for the stability necessary for the development of metallodrugs As a result, the practice in this field has previously been to attach metal complexes to targeting molecules only after these molecules have been screened As discussed above, the attachment of the metal complexes will often affect the binding of the lead targeting molecule to its receptor. This results in increased time and expense in searching for further lead molecules that do not lose their binding ability upon attachment to the chelated metal complex in question
There is therefore a need for a method of producing a combinatorial library for isolating labeled radiopharmaceutical compounds that will bind to an appropriate receptor. There is a need for such a method that employs a suitable chelating agent that will permit the targeting molecule to be labeled prior to screening so that the labeled radiopharmaceutical compounds can be evaluated rapidly and efficiently to identify lead molecules. Such a method would significantly reduce the research and development effort required to identify new lead molecules
Summary of the Invention
The present invention provides combinatorial library compounds which are effective for binding to a biological target in a rapid and cost effective manner, as well as a method of synthesizing the compounds The present invention provides a combinatorial library of targeting agents that are labelled with a metal or radionuclide metal complexed to a chelating agent. A large number of labelled targeting agents can be quickly screened for their ability to bind to a biological target.
The present invention provides a combinatorial library of targeting compounds which have attached non-radioactive metal complexes which are isostructural with radiactive compounds for imaging applications or reactive Re complexes for radiotherapy.
According to one aspect of the present invention, there is provided a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (1):
A-(B)n-C (1) wherein: A is a chelator moiety capable of complexing a metal;
B is a spacer group; n is selected from the integers 0 and 1 ; and C comprises one of a plurality of potential targeting molecules.
According to another aspect of the present invention there is provided a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (11):
(W)m-X-(Y)n-Z (11) wherein: W is selected from a group comprising: a) a metal binding moiety; b) a chelator moiety capable of binding a metal selected from polyamino polycarboxylates, polyamino polyphenolates, polyazamacrocycles with or without pendent coordination groups, tetradentate NxS4 x ligands, polyamino polysulfides, polyamino polyphosphates, polyamino polyheterocyclics and derivatives or combinations of the above; c) a metal chelator of the general formula;
X is a linear or branched, saturated or unsaturated C^ alkyl chain that is optionally interrupted by one or two heteroatoms selected from N, O, and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C,.6 alkyl, aryl and C(O)Z; Y is H or a substituent defined by X;
Z is the position of attachment for the targeting portion of the library; R1 through R4 are selected independently from H; carboxyl; C^alkyl; C^alkyl substituted with a group selected from hydroxyl, amino, sulfhydryl, halogen, carboxyl, C^ alkoxycarbonyl and aminocarbonyl; an alpha carbon side chain of a D- or L- amino acid other than proline; and C(O)Z;
R5 is selected from H and a sulphur protecting group; and T is carbonyl or CH2. d) a metal chelator selected from N,N-dimethyglycine-ser- cys-gly or N,N-dimethylglycine-tertbutylglycine-cys-gly; and e) a chelator complexed to a metal or metal radionuclide; X is a multiple chelator binding moiety capable of coupling to at least one metal binding moiety; Y is a spacer group is selected from the integers 0 and 1 ;
Z comprises a mixture of potential targeting moieties; m is greater than or equal to 1; and n is selected from the integers 0 and 1.
According to another aspect of the present invention there is provided a method for the synthesis of a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (1):
A-(B)n-C (1) wherein: A is a chelator moiety capable of complexing a metal; B is a spacer group, n is selected from the integers 0 and 1 ; and
C comprises one of a plurality of potential targeting molecules, comprising of the steps of:
(I) Preparing a mixture of potential targeting molecules using combinatorial synthesis;
(I I) Attaching to the mixture a metal chelating moiety capable of complexing a metal; and
(I I I ) Complexing the mixture with a solution of the metal in a suitable solvent
According to another aspect of the present invention, there is provided a method for the synthesis of a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (1):
A-(B)n-C (1) wherein: A is a chelator moiety capable of complexing a metal; B is a spacer group; n is selected from the integers 0 and 1 ; and C comprises one of a plurality of potential targeting molecules, comprising the steps of: I) Preparing a mixture of potential targeting molecules using combinatorial synthesis; and
(I I) Attaching to the mixture a preformed metal complex as an activated reagent in a suitable solvent.
According to yet another aspect of the present invention, there is provided a method of obtaining a compound having a desired targeting property comprising the steps of:
(I) providing a mixture which comprises a set of candidate compounds of formula (1):
A-(B)n-C (1) wherein: A is a chelator complexed to a metal or metal nuclide B is a spacer group n is selected from the integers 0 and 1 C is one of a plurality of potential targeting molecules; and
(I I) selecting from amongst the set of candidate compounds a compound having the desired property by exposing the mixture of candidate compounds to a substance to which the compound having the desired targeting property will preferentially bind.
According to another aspect of the present invention there is provided a method of obtaining a labeled compound for the purposes of diagnostic imaging having a desired targeting property comprising the steps of: (1) providing one or more sets of mixtures which comprise a mixture of candidate compounds of formula (1):
A-(B)n-C (1) wherein: A is a chelator complexed to a metal or metal nuclide B is a spacer group n is selected from the integers 0 and 1 C is one of a plurality of potential targeting molecules; and (11 ) selecting from among the set of candidate compounds a compound having the desired property by exposing the mixture of candidate compounds to a substance to which the compound having the desired targeting property will preferentially bind.
According to another aspect of the present invention there is provided a method of obtaining a labeled compound for the purposes of therapy or radiotherapy having a desired targeting property comprising the steps of;
(I) providing one or more sets of mixtures which comprise a mixture of candidate compounds of formula (1):
A-(B)n-C (1)
Wherein: A is a chelator complexed to a metal or metal nuclide B is a spacer group n is selected from the integers 0 and 1 ; and
C is one of a plurality of potential targeting molecules; and
(I I) selecting from among the set of candidate compounds a compound having the desired property by exposing the mixture of candidate compounds to a substance to which the compound having the desired targeting property will preferentially bind.
According to yet another aspect of the present invention, there is provided a method of obtaining a compound having a desired targeting property comprising the steps of;
(1) providing a mixture or set of mixtures which comprise a set of candidate compounds of formula (11):
(W)m-X-(Y)n-Z (11) wherein: W is a metal binding moiety
X is a multiple chelator binding moiety capable of coupling to at least one metal binding moiety Y is a spacer group is selected from the integers 0 and 1 ; and
Z comprises a mixture of potential targeting moieties m is greater than or equal to 1 ; and n is selected from the integers 0 and 1 ; and (11) selecting from among the set of compounds a compound having the desired targeting property by exposing the mixture of compounds to a substance to which the compound having a desired targeting property will preferentially bind.
According to another aspect of the present invention, there is provided a method of obtaining a molecule having a desired targeting property comprising the steps of:
(I) preparing a mixture or set of mixtures of candidate compounds of general formula (1):
A-(B)n-C (1) Wherein: A is a chelator complexed to a non-radioactive metal which is isostructural with an analogous complex of a radioactive metal
B is a spacer group n is selected from the integers 0 and 1 ; and C is one of a plurality of potential targeting molecules;
(I I) selecting from among the set of candidates a compound having the desired targeting property by exposing the mixture of candidate compounds to a substance to which the compound will preferentially bind; and
(I I I) preparing the isostructural radioactive analogue of the selected candidate having the desired targeting property According to another aspect of the present invention, there is provided a method for the synthesis of a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (1): A-(B)n-C (1 )
Wherein: A is a chelator complexed to a non-radioactive metal which is isostructural with an analogous complex of a radioactive metal; B is a spacer group; n is selected from the integers 0 and 1 ; and
C is one of a plurality of potential targeting molecules; comprising the steps of:
(1) Preparing a mixture of potential targeting molecules using solid phase combinatorial synthesis; and (11) Attaching to the mixture a preformed metal complex as an activated reagent in a suitable solvent.
According to another aspect of the present invention, there is provided a method for the synthesis of a library comprising one or more sets of compounds comprising the steps of:
(I) Selecting a suitable targeting molecule for binding a biological target;
(II) Preparing a library of non-radioactive rhenium-targeting molecule conjugates;
(III) Dividing mixtures of the conjugates into separate wells;
(IV) Assaying the mixtures for binding affinity to the biological target; (V) Deconvoluting the mixtures having a high a binding affinity for said biological target; and (VI) Isolating a series of discrete compounds having a high a binding affinity for said biological target. Description
The invention provides an iterative approach of library synthesis followed by biological testing and subsequent deconvolution to provide final compounds. Following initial selection of a suitable target molecule, a moderately sized focused library of non-radioactive rhenium compounds is prepared as mixtures of up to 25 compounds. Typically, a large library of rhenium targeting moiety conjugates is delivered as equimolar mixtures of 9-25 compounds in 96 well microtiter plates (1mg/well) for in vitro testing. These are then tested in the relevant assays and the most promising mixtures are segregated for deconvolution. Depending on the number of promising molecules, discovered, a second round of testing may then be undertaken using a smaller subset of the rhenium containing molecules together with a second set of biological tests to further reduce the number of molecules. The final iteration will provide a series of discrete compounds as both the rhenium complex and a free chelate ready for labeling with radioactive 99mtechnetium which is isostructural to the non-radioactive rhenium isotope used. The potential imaging lead candidates (preferably about 10 compounds) are delivered as pure chelator targeting moiety conjugates for radiolabe ng development in in vivo studies. This process provides labeled compounds that are effective for binding a biological target in a rapid and cost effective manner.
The targeting moiety of the present invention is a molecule that can selectively deliver a chelated metal or radionuclide or MRI contrasting agent to a desired location in a mammal. Preferred targeting molecules selectively target cellular receptors, transport systems, enzymes, glycoproteins and processes such as fluid pooling. Examples of targeting molecules suitable for coupling to the chelator include, but are not limited to: steroids, proteins, peptides, antibodies, nucleotides and saccharides. Preferred targeting molecules include proteins and peptides, particularly those capable of binding with specificity to cell surface receptors characteristic of a particular pathology. For instance, disease states associated with over-expression of particular protein receptors can be imaged by labeling that protein or a receptor binding fragment thereof coupled to a suitable chelator. Most preferably, targeting molecules are peptides capable of specifically binding to target sites and have three or more amino acid residues. The targeting moiety can be synthesized either on a solid support or in solution and is coupled to the next portion of the chelator-targeting moiety conjugates using known chemistry.
The second portion of the molecule, the optional linker, serves the purpose of separating the targeting portion from the imaging portion of the conjugate.
In the case of MRI agents, in order to increase the number of gadolinium (Gd) units attached to the biological target and for the purpose of increasing the relaxivity of the system, a multiple chelator coupling unit is attached to the targeting moiety (optionally via a linker subunit). This is of oligomeric or dendrimeric construction and is capable of coupling multiple chelator units to the conjugate. Preferably, this multiple chelator coupling unit is a dendrimer containing a functionality to which suitable chelators can be attached. Preferably, the multiple chelator coupling unit is a branched lysine dendrimer.
The metal chelators used for the purposes of the present invention have the following general formula:
wherein,
X is a linear or branched, saturated or unsaturated C^ alkyl chain that is optionally interrupted by one or two heteroatoms selected from N,
O.and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C1 6 alkyl, aryl and C(O)Z;
Y is H or a substituent defined by X;
Z is the position of attachment for the targeting portion of the library;
R1 through R4 are selected independently from H; carboxyl; C,^ alkyl;
C^ alkyl substituted with a group selected from hydroxyl, amino, sulfhydryl, halogen, carboxyl, C, alkoxycarbonyl and aminocarbonyl; an alpha carbon side chain of a D- or L- amino acid other than proline; and C(O)Z;
R5 is selected from H and a sulphur protecting group; and
T is carbonyl or CH2
Where a chelator is complexed to a metal or a metal radionuclide, the complex has the following general formula:
X is a linear or branched, saturated or unsaturated C.,.6 alkyl chain that is optionally interrupted by one or two heteroatoms selected from N, O, and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C1 6 alkyl, aryl and C(O)Z;
Y is H or a substituent defined by X;
Z is the position of attachment for the targeting portion of the library;
R1 through R4 are selected independently from H; carboxyl; C,^ alkyl;
C,^ alkyl substituted with a group selected from hydroxyl, amino, sulfhydryl, halogen, carboxyl, C^ alkoxycarbonyl and aminocarbonyl; an alpha carbon side chain of a D- or L- amino acid other than proline; and C(O)Z;
T is carbonyl or CH2; and
M is metal
The preferred chelators for 99mtechnetium radiopharmaceuticals are RP414 and RP455. The structures of RP414 and RP455 are as follows:
R = CH 2OH RP414
R = C(CH3)3 RP455
Re and Tc complexes of these chelators are isostructural. Also, these chelators are advantageous because the chemistry of these compounds is well understood and they form neutral Re and 99 Tc complexes. It is possible to label these chelators with Re or 99mTc in one easy step. In addition these chelators have the advantage of being applicable for conjugation to a variety of targeting molecules, being compatible with solid phase synthesis.
Labeling of RP414 with 99mTc can be carried out either at ambient or elevated temperature, rapidly, and with quantities of chelator approaching stoichiometric amounts. The complex is stable to both acidic and basic conditions and remains unchanged in-vivo.
Other chelators may be used to carry out the invention. The invention is not limited to the preferred chelators listed above.
With MRI agents, the chelator comprises a functionality chosen from the known Gd chelators and is attached to the remainder of the conjugate by either solid phase or solution chemistry.
The following examples illustrate further this invention. Abbreviations used in the examples include Acm: acetoamidomethyl; Arg: arginine; Boc: tert- butyloxycarbonyl; Cys: cysteine; DIEA: diisopropylethylamine; Dimethylgly: N,N- dimethylglycine; DMF: N,N-dimethylformamide; ES-MS: Electron Spray Mass Spectrometry; Fmoc: 9-fluorenylmethyloxycarbonyl; Gly: glycine; HBTU: 2-(1 H- benzotriazol-1-yl)-1 ,1 ,3,3-tetramethyl-uronium hexafluorophosphate; HOBT: 1- hydroxybenzotriazole; HPLC: high performance liquid chromatography; Leu: leucine; Lys: lysine; mL: millilitre(s); mmol: millimole(s); mol: mole(s); Mott: 4-methoxytrityl; NMP: N-methylpyrrolidone; Phe: phenylalanine; Pmc: 2,2,5,7,8- pentamethylchroman-6-sulfonyl; Rt: retention time; sasrin: 2-methoxy-4-alkoxybenzyl alcohol (super acid sensitive resin); Ser: seriπe; f-Bu: terf-butyl; TFA: trifluoroacetic acid; Thr: threonine; Trt: trityl; Tyr: tyrosine; Ye-R: protection group R is attached to the peptide chain via the atom, Y, on the amino acid side chain (Y is N, O or S and R is Acm, Boc, Mott, t-B or Trt). N-methylpyrrolidone, dimethylformamide, 2-(1 H- benzotriazol-1-yl)-1 ,1 ,3,3-tetramethyl-uronium hexafluorophosphate, 1- hydroxybenzotriazole, diisopropylethyl-amine, dichloromethane and trifluoroacetic acid were purchased from Applied Biosystems Inc. Triethylamine and terf-butyl methyl ether were purchased from Aldrich Chemical Inc. Fmoc amino acids and Sasrin resin were purchased from Bachem Bioscience Inc. All chemicals were used as received. [ReO2(en)2]CI and ReOCI3(PPh3)2 were prepared according to literature methods (Rouschias, G. Chem. Rev. 1974, 74, 531 ; Fergusson, J. E. Coord. Chem. Rev. 1966, , 459). Mass spectra (electrospray) were obtained on a Sciex API#3 mass spectrometer in the positive ion detection mode. HPLC analyses and purifications were made on a Beckman System Nouveau Gold chromatographic system with a Waters 4 mm radial pak C-18 column. During analytical HPLC analysis, the mobile phase was changed from 100% 0.1 % aqueous trifluoroacetic acid to 100% acetonitrile containing 0.1 % trifluoroacetic acid over 20 minutes at a flow rate of 2 mL/min. The HPLC analyses of the RP487 peptide mixture and the Re complexes of the peptide mixture were performed by changing the mobile phase from 100% 0.1% aqueous trifluoroacetic acid to 60% acetonitrile containing 0.1% trifluoroacetic acid over 20 minutes at a flow rate of 2 mL/min. All HPLC analyses were monitored with a UV detector set at 215 and 254 nm. Solid phase peptide syntheses were performed on an ABI Peptide Synthesizer model 433A using FastMoc chemistry and sasrin resin (User" Manual of Peptide Synthesizer Model 433A, Applied BioSystems, Philadelphia, 1993).
Example 1 : Preparation of a Re or Tc receptor specific radiopharmaceutical
In preparing a combinatorial library of Re or 99nTc receptor specific radiopharmaceuticals, a set of potentially receptor specific structurally distinct molecules are placed on a solid support. A bifunctional chelator such as dimethylglycine-serine-cysteine-glycine is attached to the library of molecules using tetrafluorophenol and 1-[3-(dimethylamino)-propyl]3-ethylcarbodiimide chloride. The resulting solid phase library is then heated in a solution of ReOCI3(PPh3)2 or [ReO2(en)2]CI to produce a library of Re complexes. The library of 99mTc complexes can be prepared by reacting the library with pertechnetate in the presence of tin (II) chloride and sodium gluconate. Alternatively, the library of Re and 99mTc complexes can be prepared by reacting the set of potentially receptor specific molecules with the tetrafluorophenol esters of Re and Tc dimethglycine-serine-cysteine-glycine complexes. The libraries of Re and 99mTc complexes are then cleaved off the solid support and evaluated in biological assay or in imaging studies.
Example 2: Synthesis of Gd complex as a receptor specific MRI contrasting agent.
Upon deciding on a particular receptor, a series of potentially receptor specific structurally distinct molecules are attached to solid phase support. Using diethylenetriaminetetraacetic acids dianhydride, the chelator diethylenetriaminetetraacetic acid (DTPA) is attached to the set of potentially receptor specific molecules. The resulting solid phase library is then placed in a solution of Gd acetate to produce a solid phase library of potentially receptor specific Gd complexes. The Gd is coordinated to the DTPA chelator. The library of Gd complexes is then cleaved off the solid support and evaluated in a biological assay.
Example 3: Development of a magnetic resonance imaging agent.
Some current attempts to produce efficient relaxation have resulted in the preparation of molecules having a number of gadolinium chelator molecules attached to one targeting molecule, often by way of a linker moiety to allow space between the target and the chelation parts of the molecule37 39.
The molecule can be divided into four parts; the targeting moiety, an optional suitable linker, a multiple chelator coupling unit capable of coupling multiple chelator moieties, and the chelator moieties coupled to the multiple chelator coupling unit.
The targeting moiety is a molecule that can selectively deliver a chelated radionuclide or MRI contrasting agent to a desired location in a mammal. The second portion of the molecule, the optional linker, serves the purpose of separating the targeting portion from the imaging portion of the conjugate.
In order to increase the number of gadolinium units attached to the biological target and for the purpose of increasing the relaxivity of the system a multiple chelator coupling unit is attached to the targeting moiety (optionally via a linker subunit). This is of oligomeric or dendrimeric construction and is capable of coupling multiple chelator units to the conjugate. Preferably, this multiple chelator coupling unit is a dendrimer containing a functionality to which suitable chelators can be attached. Preferably, the multiple chelator coupling unit is a branched lysine dendrimer.
The final portion of the conjugate will consist of the chelator units. This comprises a functionailty chosen from the known Gd chelators and is attached to the remainder of the conjugate by either solid phase or solution chemistry.
In order to synthesize the combinatorial libraries, mixtures of compounds in any or all of the above subsections of the agent are prepared. In addition, the preparation of a combination of libraries having a mixture in one of the sections, together with a series of related libraries produced by the alteration of the previous or subsequent parts of the agent is carried out in a parallel fashion. Hence, a library of targeting molecules would be split and each part attached to a single linker- dendrimer-chelator subunit. Such a route provides a parallel series of libraries each having a single linker-dendrimer-chelator unit in order to optimize the targeting of the molecules. Producing a mixture of compounds based on the dendrimer and single targeting-linker and chelator units allows for variation of the relaxivity of the system.
Example 4: Synthesis of Peptides Attached to a Solid Polymer Resin.
Peptides of various amino acid sequences and with varying side chain protection groups were prepared via a solid phase peptide synthesis method on an automated peptide synthesizer using FastMoc 1.0 mmole chemistry.3 Preloaded Fmoc amino acid sasrin resin and Fmoc amino acid derivatives were used. Prior to the addition of each amino acid residue to the N-terminus of the peptide chain, the FMOC group was removed with 20% piperidine in NMP. Each Fmoc amino acid residue was activated with 0.50 M HBTU/ HOBt/ DMF, in the presence of 2.0M DIEA/ NMP. The C-terminus of the completed peptide was attached to the resin via the sasrin linker. The peptidyi resin was washed with dichloromethane and dried under vacuum for 20-24 hours. This method was used to prepare the following peptidyi resin of varying amino acid sequences containing side chain protection groups:
1)RP414-resin: Dimethylgly-Ser(Oe-^-Bu)-Cys(Se-Acm)-Gly-[resin] 2)RP440-resin: Dimethylgly-Ser(Oe-f-Bu)-Cys(Se-Trt)-Gly-[resin] 3)RP441 -resin: Dimethylgly-Ser(Oe-Trt)-Cys(Se-Mott)-Gly-Thr-Lys(Ne-
Boc)-Pro-Pro-Arg(Ne-Pmc)-[resin]
4)RP442-resin: Dimethylgly-Ser(Oe-Trt)-Cys (Se-Trt)-Gly-[resin] 5)RP443-resin: Dimethylgly-Ser(Oe-Trt)-Cys(Se-Mott)-Gly-[resin] 6)RP478-resin: Dimethylgly-Ser(Oe-Trt)-Cys(Se-Mott)-Gly-Gly-Lys(Ne-
Boc)-Lys(Ne-Boc)-Leu-Leu-Lys(Ne-Boc)-Lys(Ne-Boc)-Leu-
Lys(Ne-Boc)-Lys(Ne-Boc)-Leu-Leu-Lys(Ne-Boc)-Lys(Ne-
Boc)-Leu-NH2-[resin]
Example 5: Synthesis of RP487 peptide mixture-resin, Dimethylgly-Ser(Oe-Trt)- Cys(Se-Mott)-Gly-X-Tyr(Oe-f-bu)-Gly-Z-Gly-[resin] (where X are Leu, Arg(Ne- Pmc) or Phe and Z are Lys(Ne-Boc), Ser(Oe-Trt) or Tyr(Oe-f-bu)).
The synthesis of the RP487 peptide mixture resin was performed using FastMoc 0.25 mmol chemistry on an automated synthesizer.35 Fmoc-Gly sasrin- resin (0.7 mmol/ g, 0.25 mmol, 357 mg) was placed in the reaction vessel. Amino acid cartridges 2, 3, 5, 6, and 7 counted from the C-terminus contained 1 mmol of each Fmoc amino acid derivatives, Gly, Tyr(O -Bu), Gly, Cys(Se-Mott), and Ser(Oe-Trt), respectively. Cartridge 1 had Fmoc amino acid derivatives of Lys(Ne- Boc), Ser(Oe-Trt), and Tyr(O -Bu) (0.33 mmol / amino acid). Meanwhile, cartridge 4 carried Fmoc amino acids of Arg(Ne-Pmc), Leu, and Phe (0.33 mmol/ amino acid). N,N-Dimethylglycine (1mmol) in cartridge 8 was pre-treated with 0.50 M HBTU/ HOBt/ DMF (0.8 mL) before it was inserted on the synthesizer. After completion of the automatic synthesis, the resulting product was removed from the synthesizer, and dried under vacuum for 2 hours to afford the titled RP487 peptide mixture-resin (610 mg).
Example 6: Synthesis of RP487 peptide mixture, Dimethylgly-Ser-Cys-Gly- - Tyr-Gly-Z-Gly (where X is Leu, Arg or Phe and Z is Lys, Ser or Tyr).
The RP487 peptide mixture-resin (120 mg, 0.05 mmol) was added to a cleavage composition of 82.5% TFA/ 5% phenol/ 5% thioanisole/ 2.5% 1 ,2-ethane dithiol/ 5% mili-Q water (1 mL) at 0 °C.36 The reaction suspension was then stirred at room temperature for 5 hours. The cleavage suspension was filtered by vacuum after 5 hours, and the filtrate was allowed to add in cold .erf-butyl methyl ether (20 mL) at 5°C. The precipitated residue was subsequently washed with tetf-butyl methyl ether (2 x 30 mL). The resulting residue was then dissolved in milli-Q water (2 mL), frozen and lyophilized (22 hours) to give the titled RP487 peptide mixture as an off-white pellet (52 mg). Mass spectrum (electrospray): m/z = 828 (MH+, [C34H54N9O13S1]), {X is Leu and Z is Ser}; m/z = 862 (MH+, [C37H52NβO13S1]), {X is Phe and Z is Ser};. m/z = 869 (MH+, [C^H^N^O^S ), {X is Leu and Z is Lys}; m/z = 871 (MH+, [CMHSSN^O^S,]), {X is Arg and Z is Ser}; m/z = 903 (MH+, {X is Phe and Z is Lys}; m/z = 904 (MH+, {X is Leu and Z is Tyr}; m/z = 912 (MH+, [C^H^N^O^SJ), {X is Arg and Z is Lys }; m/z = 938 (MH+, {X is Phe and Z is Tyr }; m/z = 947 (MH+, {X is Arg and Z is Tyr }. HPLC retention time: R, = 7.18 minutes (broad peak); R, = 9.0-9.9 minutes (overlapping broad peak); Rt = 11.0-11.5 minutes (overlapping broad peak); Rt = 16.5-16.8 minutes (broad overlapping peaks); R, = 17.9 minutes (broad peaks). Example 7: Synthesis of Re oxo complex of Dimethylgly-Ser-Cys-Gly using RP442-resin.
RP442-resin (0.1055 g) was swollen in 3 mL of NMP. ReOCI3(PPh3)2 (0.3793 g, 0.000456 moles) and 1 mL of triethylamine were added to the NMP resin mixture. The ReOCI3(PPh3)2 dissolved to give a purple mixture. The mixture was heated at 40-50 °C for 4 hours. The resin was then collected by vacuum filtration. The resin was washed with 3 x 10 mL NMP, followed by 3 x 10 mL CH2CI2. The resin was dried under vacuum overnight. To cleave the Re complex off the solid support, the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 4 hours. The resin was removed by vacuum filtration and the supernatant was added dropwise to tetf-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. The syn and anti isomers of the Re complex were observed in the HPLC chromatogram. This is consistent with other known Re complexes with N4.XSX chelators. The coordination of the peptide to the Re metal caused the displacement of the cysteine sulfur trityl protection group but did not cause the peptide to be cleaved off the resin. The cleavage of the peptidic complex off the resin in acidic medium removed all remaining side chain protection groups but did not cause the metal complex to undergo decomplexation.. Mass spectrum (electrospray): m/z = 550 (MH+, [C12H20N4O7Re1S1]). HPLC retention time: R, = 5.98 minutes (isomer A); Rt = 6.22 minutes (isomer B).
Example 8: Synthesis of Re oxo complex of Dimethylgly-Ser-Cys-Gly using RP443-resin.
RP443-resin (0.1621 g) was swollen in 3 mL of NMP. ReOCI3(PPh3)2 (0.4023 g, 0.000483 moles) and 1 mL of triethylamine were added to the NMP resin mixture. The ReOCI3(PPh3)2 dissolved to give a purple mixture. The mixture was heated at 40-50 °C for 4 hours. The resin was then collected by vacuum filtration. The resin was washed with 3 x 10 mL NMP, followed by 3 x 10 mL CH2CI2. The resin was dried under vacuum overnight. To cleave the Re complex off the solid support, the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 4 hours. The resin was removed by vacuum filtration and the supernatant was added dropwise to terf-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. The syn and anti isomers of the Re complex was observed in the HPLC chromatogram. The coordination of the peptide to the Re metal caused the displacement of the cysteine sulfur trityl protection group but did not cause the peptide to be cleaved off the resin. The cleavage of the peptidic complex off the resin in acidic medium removed all remaining side chain protection groups but did not cause the metal complex to undergo decomplexation Mass spectrum (electrospray): m/z = 550 (MH+, HPLC retention time: Rt = 5.53 minutes (isomer A); R, = 6.13 minutes (isomer B).
Example 9: Synthesis of Re oxo complex of Dimethylgly-Ser-Cys-Gly-Thr-Lys- Pro-Pro-Arg using RP441 -resin.
RP441-resin (0.0799 g) was swollen in 3 mL of NMP. ReOCI3(PPh3)2 (0.3983 g, 0.000478 moles) and 1 mL of triethylamine were added to the NMP resin mixture. The ReOCI3(PPh3)2 dissolved to give a purple mixture. The mixture was heated at 40-50 °C for 8 hours. The resin was then collected by vacuum filtration. The resin was washed with 3 x 10 mL NMP, followed by 3 x 10 mL CH2CI2. The resin was dried under vacuum overnight. To cleave the Re complexes off the solid support, the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 4 hours. The resin was removed by vacuum filtration and the supernatant was added dropwise to ter-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. The syn and anti isomers of the Re complex were observed in the HPLC chromatogram. The coordination of the peptide to the Re metal caused the displacement of the cysteine sulfur trityl protection group but did not cause the peptide to be cleaved off the resin. The cleavage of the peptidic complex off the resin in acidic medium removed all remaining side chain protection groups but did not cause the metal complex to undergo decomplexation. Mass spectrum (electrospray): m/z = 1129 (MH+, [CaβHβsN.gO.jRe.S.]) HPLC retention time: Rt = 6.18 minutes (isomer A); R, = 6.70 minutes (isomer B)
Example 10: TKPPR+ReORP455-TP-P ester:
To a slurry of sasnn-Arg-Pro-Pro-Lys-Thr resin (15mg) in ethyl acetate (0.5mL) was added a solution of ReO-N,Ndιmethylglycιne-ser-cys-gly-Otfp
(prepared from 10mg of ReO-N,N-dιmethyglycιne-ser-cys-gly-OH) in ethyl acetate (0.5mL) and the resulting solution shaken intermittently at room temperature for 2h The resulting colourless solution was filtered off from the now pink/brown resin and the resin washed with ethyl acetate followed by dichloromethane and then dried in vacuo. The peptide-chelate conjugate was then liberated from the resin by treatment with 0.5mL 95% trifluoroacetic acid at room temperature for 1 5h The solution was then filtered off and the volatiles removed under reduced pressure Presence of ReORP128 was confirmed by co-injection of the product with an authentic sample of ReORP128 prepared by solution chemistry (retention time 9 15 using a gradient elution of 0 to 100% acetonitrile in water buffered with 0 1 % trifluoroacetic acid over 20 mins)
Example 11 : Synthesis of Re oxo complex of Dimethylgly-Ser-Cys-Gly-Gly-Lys- Lys-Leu-Leu-Lys-Lys-Leu-Lys-Lys-Leu-Leu-Lys-Lys-Leu-NH2 using RP478- resin.
RP478-resin (0.1125 g) was swollen in 3 mL of NMP ReOCI3(PPh3)2 (0.6351 g, 0.000763 moles) and 1 mL of triethylamine were added to the NMP resin mixture The ReOCI3(PPh3)2 dissolved to give a purple mixture The mixture was heated at 40-50 °C for 8 hours. The resin was then collected by vacuum filtration. The resin was washed with 3 x 10 mL NMP, followed by 3 x 10 mL CH2CI2 The resin was dried under vacuum overnight. To cleave the Re complex off the solid support, the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 8 hours. The resin was removed by vacuum filtration and the supernatant was added dropwise to tetf-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. The syn and anti isomers of the Re complex was observed in the HPLC chromatogram. The coordination of the peptide to the Re metal caused the displacement of the cysteine sulfur trityl protection group but did not cause the peptide to be cleaved off the resin. The cleavage of the peptidic complex off the resin in acidic medium removed all remaining side chain protection groups but did not cause the metal complex to undergo decomplexation. Mass spectrum (electrospray): m/z = 2310 (MH+, [C98H188N28O21Re1S1]). HPLC retention time: Rt = 11.17 minutes (broad peak).
Example 12: Synthesis of Re oxo complex of Dimethyigly-Ser-Cys-Gly- -Tyr- Gly-Z-Gly (where X is Leu, Arg or Phe and Z is Lys, Ser or Tyr) using RP487- resin.
RP487-resin (0.0618 g) was swollen in 3 mL of NMP. ReOCI3(PPh3)2 (0.9210 g, 0.00111 moles) and 1 mL of triethylamine were added to the NMP resin mixture. The ReOCI3(PPh3)2 dissolved to give a purple mixture. The mixture was heated at 40-50 °C for 12 hours. The resin was then collected by vacuum filtration. The resin was washed with 3 x 10 mL NMP, followed by 3 x 10 mL CH2CI2. The resin was dried under vacuum overnight. To cleave the Re complexes off the solid support, the resin was placed in 90 % aqueous trifluoroacetic acid and stirred for 4 hours. The resin was removed by. vacuum filtration and the supernatant was added dropwise to tetf-butyl methyl ether at 0 °C. Red-brown precipitate formed. The precipitate was collected by centrifugation and analyzed by HPLC and electrospray mass spectrometry. Since the Re complex of each peptide sequence exists as the syn and anti isomers, the total number of compounds prepared was 18. Mass spectrum (electrospray): m/z = 1027 (MH+, {X is Leu and Z is Ser}; m/z = 1062 (MH+, {X is Phe and Z is Ser};. m/z = 1069
{X is Phe and Z is Lys}; m/z = 1104 (MH+, {X is Leu and Z is Tyr}; m/z = 1112 (MH+, [C^HeoN^O^Re^]), {X is Arg and Z is Lys }; m/z = 1138 (MH+, [C43H54N9O14Re1S1]), {X is Phe and Z is Tyr }; m/z = 1147 (MH+, [C40H57N12O14Re1S1]), {X is Arg and Z is Tyr }. HPLC retention time: Rt = 8.40 minutes; R, = 8.99 minutes; Rt = 9.62 minutes; R, = 9.90 minutes; Rt = 10.14 minutes; Rt = 11.0-12.7 minutes (overlapping peaks); R, = 15.1 minutes (broad peak); Rt = 15.4 minutes (broad peak).
Example 13: Synthesis of Re oxo complex of Dimethylgly-Ser-Cys-Gly-X-Tyr- Gly-Z-Gly (where X are Leu, Arg or Phe and Z are Lys, Ser or Tyr) in aqueous solution.
[ReO2(en)2]CI (0.0434 g, 0.000116 moles) was dissolved in 1.5 mL of milli-Q water. The mixture of the 9 peptides (0.0436 g) was dissolved in 2 mL of milli-Q water. The two solutions were combined to give a light green solution. The pH of the solution was adjusted to 6 using 1 M NaOH. The solution was refluxed under Ar for 2 hours, during which time the solution changed from green to red. The solution was frozen and lyophilized overnight, yielding a red solid. The solid was analyzed by HPLC and electrospray mass spectrometry. Mass spectrum (electrospray): m/z = 1027 (MH+, {X is Leu and Z is Ser}; m/z = 1061 (MH+, {X is Leu and Z is Lys}; m/z = 1071 (MH+, [C34H53N12O14Re1Sl]), {X is Arg and Z is Ser}; m/z = 1103 (MH+, [C.oH^N^O^Re^]), {X is Phe and Z is Lys}; m/z = 1104 (MH+, {X is Leu and Z is Tyr}; m/z = 1112 (MH+, {X is Phe and Z is Tyr }; m/z = 1146 (MH+, [C^N^O^Re^]), {X is Arg and Z is Tyr }. HPLC retention time: Rt = 8.45 minutes; R, = 9.02 minutes; R, = 9.67 minutes; R, = 9.95 minutes; Rt = 10.27 minutes; R, = 11.0-12.8 minutes (overlapping peaks); R, = 15.2 minutes (broad peak); Rt = 15.7 minutes (broad peak).
Example 14: Use of multiple discrete loaded resins in one reactor vessel to provide a combinatorial library
The various peptide sequences containing varying side chain protecting groups in these examples were synthesized via a solid phase synthesis method on an automated synthesizer using FastMoc chemistry on scales varying from 0.1 to I .Ommol. Prior to the addition of each amino acid residue to the N-terminus of the peptide chain the FMOC group was removed with 20% piperidine in NMP. Each FMOC amino acid was activated with 0.5M HOBT/HBTU/DMF in the presence of 2.0M DIEA/NMP. The C-terminus was attached to the solid phase via the sasrin linker. After completion of the synthesis the resin was washed with NMP followed by dichloromethane and dried under vacuum for up to 24 hours.
Example 15: Synthesis of a library of peptides on solid phase having the sequence Dimethylglycine-Ser(O-Trt)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z-Y (Where X is Leu, Arg(N-Pmc), or Phe, Z is Lys(N-Boc), Ser(O-Trt), or Tyr(o_t- Bu), and Y is Gly, Phe, Leu, Arg(N-Pmc), or Lys(N-Boc))
The reactor vessels employed in the peptide synthesizer were loaded with a mixture of 5 MicroKans (supplied by IRORI ) each containing 30mg of Tenta gel TGA resin having the following amino acids preloaded; glycine, Phenylalanine, Leucine, Arginine, Lysine. This mixture was then subjected to the conditions described above to synthesize the following amino acid sequence onto each of the resins;
RPLIB6G-resin: Dimethylgly-ser(O-t-bu)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z- Gly-Resin RPLIB6F-resin Dimethylgly-ser(O-t-bu)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z- Phe-Resin
RPLIB6L-resin: Dimethylgly-ser(O-t-bu)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z- Leu-Resin
RPLIB6R-resin: Dimethylgly-ser(O-t-bu)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z- Arg-Resin
RPLIB6K-resin: Dimethylgly-ser(O-t-bu)-Cys(S-Acm)-Gly-X-Tyr(O-t-Bu)-Gly-Z- Lys-Resin
Where X consists of a mixture of FMOC amino acid derivatives of Leu, Arg (N-Pmc), or Phe, and Z consists of a mixture of FMOC amino acid derivatives of Lys(N-boc), Ser(O-trt) or Tyr(O-t-Bu). These mixture are incorporated into the peptide synthesis using the method outlined in example 2
Example 16: Synthesis of a series of peptides having the sequence Dimethylglycine-Ser-Cys-Gly-X-Tyr-Gly-Z-Y (Where X is Leu, Arg, or Phe, Z is Lys, Ser, or Tyr, and Y is Gly, Phe, Leu, Arg, or Lys)
The RPLIB6 mixtures prepared in example 15 above (30mg) were added to a cleavage mixture consisting of 95% TFA in water (300 L). The reaction suspensions were then shaken at room temperature for 3hours. The mixtures were then filtered and added to tert-butyl methyl ether (1 mL). The resulting solid was collected and dried under vacuum then analysed by HPLC using a method of 0 to 100% acetonitrile in water buffered with 0.1 % trifluoroacetic acid. Comparison of the particular peptide sequence where Y is Gly with that peptide synthesized in example 6 by HPLC showed formation of the required compounds. Example 17: Investigation of the effect of amide capping group (CG)NH on the agonist antagonist functioning ability of peptide CG-NH-Nle-Leu-Leu-Phe-Lys- Gly-COOH
The N-terminal amine of the above peptide attached to sasrin resin (100mg) is deprotected of its Fmoc group under standard Fmoc deprotection conditions. The amine is then capped with a suitably reactive reagent (see list below). The resin is placed in a solution of NMP (500uL) for the resin to swell. To this solution is added DIEA (25uL, 2M) and one of the capping agents (O.δmmol). The reaction is shaken for 2 to 18 hours at room temperature. The reaction is filtered and the resin is washed with NMP (3x5mL) then dichioromethane (3x5mL) and the resin is dried in vacuo. The capped peptide is removed from the resin by shaking in the presence of 95% Trifluoroacetic acid (0.5-1 mL) at room temperature for 4 hours. After the cleavage is complete the resin is filtered off and then washed with further trifluoroacetic acid (0.5mL). The combined trifluoroacetic acid solutions are then combined and concentrated under reduced pressure. The capped peptide is then purified by reverse phase HPLC on C18 silica gel using a gradient of 0-100% acetonitrile in water over a period of 20 mins The cuts containing the relevant compound are then lyophilized and the peptide analyzed by electrospray mass spectroseopy. The peptides display the properties shown in the table below.
RP# Capping Group # Retention Time Molecular Weight
522-2 2 11.31 592
522-3 3 12.07 614
522-4 4 13.24 670
522-6 6 12.69 619
522-7 7 12.92 618
522-10 10 13.06 653
522-12 12 11.76 738 522-13 13 14.50 682
522-14 14 12.89 676
522-15 15 13.23 650
522-16 16 14.96 742
522-17 17 11.70 588
522-18 18 14.13 715
A list of the amine capping agents (and the associated capping group number) includes but is not limited to:
16 17 18
Example 18: Synthesis of a library of 324 potential chemotactic peptides using a combination of parallel synthesis and split and mix technologies
Libraries are based on the following peptide sequence:
The various peptide sequences (that is the sequence Gly-Lys(DDE)-(mixture A,B,C)-(mixture D,E,F)-Phe-Leu-Nle-NH2 and numbered RP552 through RP557) containing varying side chain protecting groups in these examples were synthesised via a solid phase synthesis method on an automated synthesizer using FastMoc chemistry on 1.0 mmol scale. Prior to the addition of each amino acid residue (or mixture of acids as described above) to the N-terminus of the peptide chain the FMOC group was removed with 20% piperidine in NMP. Each FMOC amino acid was activated with 0.5M HOBT/HBTU/DMF in the presence of 2.0M DIEA/NMP. The C-terminus was attached to the solid phase via the sasrin linker. After completion of the synthesis the resin was washed with NMP followed by dichloromethane and dried under vacuum for up to 24 hours. Where mixture of amino acids were employed the three amino acids were added as equimolar mixtures of suitably side chain protected FMOC acid residues in a single coupling step and otherwise treated as a single amino acid residue.
Example 19: Capping the terminal amino group of peptide mixtures (RP552- 557)
The N-terminal amino group of each mixture of 9 compounds is deprotected of its Fmoc group under standard fmoc deprotection conditions. The amine is then capped with a suitably reactive reagent (see list). Each microkan is placed in a solution of NMP (500uL) for the resin to swell. To this solution is added DIEA (25uL, 2M) and one of the capping agents (O.δmmol). The reaction is shaken for 2 to 18 hours at room temperature. Completion of the capping was confirmed by treatment of a small portion of the resin with 3% ninhydrin-EtOH. Lack of blue/purple colour indicated a complete reaction. The reaction is filtered and the resin is washed with NMP (3x5mL) then dichloromethane (3xδmL) and the resin is dried in vacuo.
Each of the peptides was liberated from the support in 9δ% TFA: 5% water (1mL) after 4 hours shaking at room temperature, followed by filtration. The products were concentrated in vacuo. The residue was redissolved in trifluoroacetic acid (150uL) and dripped into t-butyl-methyl ether (δmL) to precipitate. Each was centrifuged to a pellet, the solvent decanted and the pellets dried in vacuo. The products were dissolved in water and acetontrile (~δmL) and lyophilized to pale beige powders. The products were then purified by reverse phase HPLC (C18 silica Gel using a gradient system of 0-to 100% acetonitrile in water buffered with 0.1 % trifluoroacetic acid), the products having the retention times and mass spectra as described below in the table. A list of such amine capping agents might include but is not limited to:
List of Capping Groups for Chemotactic Peptide
Et,N
Example 20: Routes for the introduction of the rhenium complexes to each mixture (RP552-557)
Two routes to the introduction of a rhenium complex to the mixtures can be envisaged.
Route A:
This route requires that the lysine side chain first be deprotected and one of the chelators (RP414 or RP4δδ) be attached to the sequence as a single residue or stepwise. Each of these can be accomplished by standard synthesizer chemistry.
The cysteine residue must be sulphur protected with a labile group which is lost 3δ
during rhenium coordination such as Mott as described in example 7 of the original patent filing.
Each mixture containing the rhenium chelator is placed in a solution of NMP δ (3mL) and the resin is allowed to swell. To each is added ReOCI3(PPh3)2 (O.δmmol) and triethylamine (1mL). The reaction is heated at 40-δ0°C for 8 hours. The reaction is filtered and the resin is washed with NMP (3xδmL) then dichloromethane (3xδmL) and dried in vacuo.
0 Route B:
This route requires that the lysine side chain be deprotected on the resin and the entire rhenium complex (RP414 or RP455) be attached as a single residue Each microkan was placed in NMP (1mL) to swell the resin. To the solution was added ReO-RP414 (20mg, 0.037mmol) or ReO-RP455 (0.037mmol), then tetrafluorophenol 5 (10mg, O.Oβmmol), and EDC (20mg, 0.1 mmol). The reaction is shaken for 24 hr in a 45°C bath. The reaction is filtered and the resin is washed with NMP (3xδmL) then dichloromethane (3xδmL) and dried in vacuo. Alternately, several mikrocans can be reacted at the same time in a larger reaction volume in the same stoichiometric ratios. 0
Example 21 : Synthesis of ReO-Dimethylglycine-t-butyl-glycine-S Acetamidomethyl-Cysteine-Giycine(ReO-RP455)
The title product was synthesized by the literature methods of E. Wong et al. δ Inorganic Chemistry 36: 6799-6808 (1997).
Example 22: Synthesis of ReO-Dimethylglycine-t-butyl-glycine-S- Acetamidomethyl-Cysteine-Glycine(ReO-RP455) tetrafluorophenyl ester
30 To ReO-RP45δ (60mg) in 1 :1 acetonitrile:water (1mL) was added tetrafluorophenol (100mg). The solution was diluted with acetonitrile (2mL). The pH was measured at 2. To the solution was added 1(3-dimethylaminopropyl)-3- ethylcarbodiimide hydrochloride. The reaction was swirled to dissolve and the pH measured at δ. The reaction was allowed sit at room temperature for 16 minutes followed by concentrating to a dark oil in vacuo. The product was purified on a δ Supeico supelclean LC-18 column. The column was first washed with a 5% acetonitrile: 9δ% water solution acidified to pH2 with 3N HCI. The product was eluted in a 60% acetonitrile: 60% water solution acidified to pH2 with 3N HCI. The appropriate pure fractions were identified by silica TLC (t-butanol:water:methanol, 10:3:2, rf: 0.8δ) followed by KMnO4 staining. The correct fractions were pooled and 0 concentrated in vacuo to a red-brown glass (58mg, % yield).
Example 23: Synthesis of ReORP455 libraries RP552 to RP557 (N-terminus amino group capped with capping groups 6, 10, 13, 16, 17, 18) on sasrin resin
δ Each of the N-terminus capped libraries on sasrin resin (20 mg) was placed in a Biorad disposable column. The Dde epsilon ammo group protection on C-terminus Lysine was first removed with three washes of 2% hydrazine in N-methylpyrrolidone (3x1 mL). The resin was thoroughly washed with N-methylpyrrolidone then dichloromethane, and dried in vacuo. To each vessel was added ReO- 0 Dimethylglycine-t-butyl-glycine-S-Acetamidomethyl-Cysteine-Glycine(ReO-RP4δδ) tetrafluorophenyi ester (10mg) in ethyl acetate (1 mL). The reactions were capped and shaken 20 hours at room temperature, followed by filtration, washing with copious ethyl acetate, N-methylpyrrolidone, dichloromethane. The red-brown resins were dried in vacuo. δ
Example 24: Cleavage of ReO-RP455-RP552 to RP557 with N-terminus amino capping groups attached
Each of the ReO libraries were liberated from the supports in 9δ% TFA: 5%
30 water (1mL) after 4 hours shaking at room temperature, followed by filtration. The products were concentrated in vacuo. The residue was redissolved in trifluoroacetic acid (1δ0uL) and dripped into t-butyl-methyl ether (δmL) to precipitate. Each was centrifuged to a pellet, the solvent decanted and the pellets dried in vacuo. The products were dissolved in water and acetontrile (~δmL) and lyophilized to pale pink powders.
Example 2δ: Deconvolution of Peptide Mixture ReORP552 with N-terminus capping goups attached.
Following assay of the above mixtures of compounds using the method detailed below the following series of peptides was prepared as single molecules using the following method. The various peptide sequences containing varying side chain protecting groups in these examples were synthesized via a solid phase δ synthesis method on an automated synthesizer using FastMoc chemistry on scales varying from 0.1 to I .Ommol. Prior to the addition of each amino acid residue to the N-terminus of the peptide chain the FMOC group was removed with 20% piperidine in NMP. Each FMOC amino acid was activated with O.δM HOBT/HBTU/DMF in the presence of 2.0M DIEA/NMP. The C-terminus was attached to the solid phase via 0 the sasrin linker. After completion of the synthesis the resin was washed with NMP followed by dichloromethane and dried under vacuum for up to 24 hours.
The following peptides were prepared and used still attached to sasrin resin:
δ Resin-gly-lys(DDE)-glu-trp-phe-leu-Nle
Resin-gly-lys(DDE)-glu-ser-phe-leu-Nle
Resin-gly-lys(DDE)-glu-tyr-phe-leu-Nle
Resin-gly-lys(DDE)-his-trp-phe-leu-Nle
Resin-gly-iys(DDE)-his-ser-phe-leu-Nle 0 Resin-gly-lys(DDE)-his-tyr-phe-ieu-Nle
Resin-gly-lys(DDE)-lys-trp-phe-leu-Nle
Resin-gly-lys(DDE)-lys-ser-phe-leu-Nle
Resin-gly-lys(DDE)-lys-tyr-phe-leu-Nle Each of the following resins containing the peptides was then capped with a cyclopropylcarbonyl group as follows: Each resin is placed in a solution of NMP (500uL) for the resin to swell. To this solution is added DIEA (2δuL, 2M) and cyclopropane carbonyl chloride (O.δmmol). The reaction is shaken for 18 hours at room temperature. The reaction is filtered and the resin is washed with NMP (3xδmL) then dichloromethane (3xδmL) and the resin is dried in vacuo. Completion of the reaction is ensured by the use of a ninhydrin test to indicate complete reaction of amino groups.
Having attached the capping group to the amino terminus of the peptide attached to the resin the rhenium complex was introduced as follows: The Dde epsilon amino group protection on C-terminus Lysine was first removed with three, five minute washes of 2% hydrazine in N-methylpyrrolidone (3x1 mL). The resin was δ then thoroughly washed with N-methylpyrrolidone then dichloromethane, and dried in vacuo. To each vessel was added ReO-Dimethylglycine-t-butyl-glycine-S- Acetamidomethyl-Cysteine-Glycine(ReO-RP4δ5) tetrafluorophenyl ester (10mg) in ethyl acetate (1mL). The reactions were capped and shaken 20 hours at room temperature, followed by filtration, washing with copious ethyl acetate, N- 0 methylpyrrolidone, dichloromethane. The red-brown resins were dried in vacuo. Liberation of the rhenium complex of the peptide from the resin was carried out as follows: Each of the ReO complexes were liberated from the supports in 9δ% TFA: δ% water (1mL) after 4 hours shaking at room temperature, followed by filtration. The products were concentrated in vacuo. The residue was redissolved in δ trifluoroacetic acid (1δ0uL) and dripped into t-butyl-methyl ether (δmL) to precipitate.
Each was centrifuged to a pellet, the solvent decanted and the pellets dried in vacuo. The products were dissolved in water and acetontrile (~δmL) and lyophilized to pale pink powders. The single compounds were then purified by reverse phase
HPLC using vydac C18 protein and peptide column and a graded eluent system 0 using water and acetonitrile buffered with 0.1 % trifluoroacetic acid, the gradient increasing from 0% acetonitrile to δδ% acetonitrile in water over a period of 20 minutes. The fractions containing the peptide were then lyophilized and analyzed by mass spectroseopy.
Compounds prepared as their rhenium oxo complex
ReO-Gly-lys(Dimethylgly-t-Butylgly-cys-gly)-glu-trp-phe-leu-Nle-NHCOcyclopropyl HPLC retention time:22min; ESMS (1518, M+H), expected 1518
ReO-Gly-lys(Dimethylgly-t-Butylgly-cys-gly)-glu-ser-phe-leu-Nle-NHCOcyclopropyl RP563-17-0 HPLC retention time: 19.8min
ReO-Gly-lys(Dimethylgly-t-Butylgly-cys-gly)-glu-tyr-phe-leu-Nle-NHCOcyclopropyl RPδδ3-17-0 HPLC retention time: 20.1 min
ReO-Gly-lys(Dimethylgly-t-Butylgly-cys-gly)-his-trp-phe-leu-Nle-NHCOcyclopropyl RPδδ3-17-0 HPLC retention time: 21 .0min
ReO-Gly-lys(Dimethylgly-t-Butylgly-cys-gly)-his-ser-phe-leu-Nle-NHCOcyciopropyl RPδδ3-17-0 HPLC retention time: 19.2min
ReO-Gly-lys(Dimethylgly-t-Butylgly-cys-gly)-his-tyr-phe-leu-Nle-NHCOcyclopropyl RP553-17-0 HPLC retention time: 19.3min ReO-Gly-lys(Dimethylgly-t-Butylgly-cys-gly)-lys-trp-phe-leu-Nle-NHCOcyclopropyl RPδδ3-17-0 HPLC retention time: 20. δ min
ReO-Gly-lys(Dimethylgly-t-Butylgly-cys-gly)-lys-ser-phe-leu-Nle-NHCOcyclopropyl δ RPδδ3-17-0 HPLC retention time: 18.8min
ReO-Gly-lys(Dimethylgly-t-Butyigly-cys-gly)-glu-tyr-phe-leu-Nle-NHCOcyclopropyl RPδδ3-17-0 HPLC retention time:
0 Example 26: Small Molecule Re Complex Conjugate
Using the methods described above the following peptide was prepared and used attached to the sasrin resin:
δ Resin-Gly-Lys(DDE)
Following the procedure described in Journal of the American Chemical Society 1992, 114, 10646 this peptide was treated with bromoacetic acid as follows
0 To a slurry of the resin (O.δmmol/gram loading, 100mg) in dimethyformamide
(O.δmL) was added bromoacetic acid (70mg, O.δmmol) followed by dicyclohexylcarbodiimide (123mg, 0.6mmol) The resulting mixture was shaken at room temperature for 3δ minutes and was then filtered. The resin was washed with dimethylformamide (3 x 2mL) followed by washing with dichloromethane (3 x 2mL) δ and was then dried in vacuo prior to further use. Ninhydrin test on this resin proved negative for free amino groups.
A portion of the above resin (20mg) was slurried in dimethysulfoxide (200 L) and to this slurry was added 1-phenylpiperazine (32mg, 30 L) and the whole mixture
30 was agitated at room temperature for 4 hours. The mixture was filtered and the resin washed with N-methylpyrroiidinone (3 x 2mL) then dichloromethane (δ x 2mL) and dried in vacuo. A small portion of this resin (7mg) was liberated from the resin using three successive five minute washes with 600 L of 2% hydrazine in N- methylpyrrolidinone (to remove the DDE protecting group) followed by 9δ% trifluoroacetic acid (1mL). Filtration of the TFA solution followed by removal of the δ volatiles under reduced pressure gave glycyl-lysyl-N-(4-phenylpiperazinylcarbonyl). The remainder of the resin was treated with 2% hydrazine as above (to remove the DDE group) and after washing and drying was then treated with a solution of ReO- Dimethylglycine-t-butyl-glycine-S-Acetamidomethyl-Cysteine-Glycine(ReO-RP4δδ) tetrafluorophenyl ester (10mg) (prepared as described above) in ethylacetate (1 mL) 0 and the mixture shaken overnight. The resin was filtered and washed with N- methypyrrolidinone (3 x 2mL) followed by dichloromethane (3 x 2 mL) and then dried in vacuo. The rhenium complex was liberated from the resin using 9δ% trifluoroacetic acid (600 L) for 1.δh at room temperature. Filtration of the solution and removal of the trifluoroacetic acid under reduced pressure gave glycyl-lysine( -Re δ oxo Dimethylglycyl-t-Butylglycyl-cysteinyl-glycyl)-N-(4-phenylpiperazin-1 - ylacetamide):ESMS 963 (M+H+), expected 963.
Example 27: Preparation of libraries of small molecules δ
Using the method described above for the preparation of glycyl-lysine( -Re oxo Dimethylglycyl-t-Butylglycyl-cysteinyl-glycyl)-N-(4-phenylpiperazin-1-ylacetamide) libraries of small molecules have been prepared as follows. Equimolar mixtures of eight variously substituted piperazines were substituted for the phenylpiperazine in 0 the above sequence to provide a final mixture of eight compounds. These mixtures are detailed below. Mixture 1 : 1-phenylpiperazine, 2-(1-piperazinyl)pyridine, 2-(1- piperazinyl)pyrimidine, 1-cyclohexylpiperazine, 1-
(pyrrolidinocarbonylmethyl)piperazine, 1 -(morpholinocarbonylmethyl)piperazine, 1 - δ bis(4-fluorophenyl)methylpiperazine, 1-piperonylpiperazine
Mixture 2: 1-(2,3dimethylphenyl)piperazine, 1-(o-tolyl)piperazine, 1-(4- fluorophenyl)piperazine, 1-(4-nitrophenyl)piperazine, 1-(2-(2- hydroxyethoxy)ethyl)piperazine, 1 -(4-chlorobenzhydryl)piperazine, 1 -(4,4-bis(4- 0 fluorophenyl)butyl)piperazine, 1-(diphenylmethyl)piperazine, 1-(2- hydroxyethyl)piperazine
Example 28: Large Random Library of Re complex-peptide-conjugates
δ Using the peptide synthesis method described previously, 6,8δ9 peptides were synthesized with the following composition:
Sasrin-AA1-AA2-AA3-β-Ala
0 Nineteen Sasrin resins with one amino acid attached (AA^ were combined in the reaction vessel of the peptide synthesizer. The nineteen amino acids (AA2) included all of the natural amino acids except Cys. The synthesis was done on a 0.1 mmol scale. Therefore, O.OOδ mmol of each resin-bound amino acid was added to the reaction vessel. The gram equivalents are listed in Table 1. Nineteen free δ amino acids were combined in equimolar amounts in each of two cartridges (AA2 and AA3). A 10-fold excess of each of the amino acids was used so that each cartridge contained Immol of amino acids. Therefore, there were O.Oδ mmol of each amino acid in each of the cartridges.
30 The last amino acid to be added to the sequence was β-Ala. This acted as a linker for the Re oxo complex. The amount used was 1 mmol which is 0.311g.
ReO-Dimethylglycine-serine-S-Acetamidomethyl-Cysteine-Glycine(ReO- RP414) tetrafluorophenyl ester (10mg) (prepared as described above for ReO- Dimethylglycine-serine-S-Acetamidomethyl-Cysteine-Glycine ReO RP4δδ) ester was synthesized as described above and added as an ethyl acetate solution (in 1mL ethyl acetate) to the resin-bound peptide (10 mg). The reaction was allowed to mix overnight then was filtered and washed with ethyl acetate (3 times), water (3 times) and dichloromethane (3 times). The resin was dried on the aspirator and then cleaved with 9δ% trifluoroacetic acid in water (3 hours). The trifluoroacetic acid/peptide solution was filtered into tert-butyl methyl ether (10 mL) and centrifuged. The ether was decanted. This washing process was repeated 3 times. After the final wash the ether was decanted leaving behind the peptide which had precipitated. The peptide was dissolved in water (1 mL), frozen with liquid nitrogen δ and lyophilized.
Example29: Library of Rhenium compounds based on glycosides
Compounds contained in this library rely on the structural constraints inherent 0 in the carbohydrate structure to impart directionality into the compounds. Thus decoration of the carbohydrate skeleton with suitable functional groups, one of which consists of a rhenium chelating agent such as RP414 or RP4δδ as described above will allow the preparation of structurally diverse libraries of rhenium containing molecules. Hence treatment of glucose with a suitable alcohol (for example tertiary δ butanol or methanol) in acid catalyzed conditions (most preferably using Dowex 60W-X8 in benzene) following the procedure of Lin et. al. Journal of the American Chemical Society 1992, 114, 10138 gives the glucose substituted at C-1. Treatment of this substituted glucose with a mixtures up to 20 diversity functionalities containing reactive leaving groups (for example iodide, triflate or tosylate) in an inert 0 solvent (for example benzene or dichloromethane) results in a glucose having diversity attached at four points (i.e. C-2, C-3, C-4, C-δ) around the periphery of the glucose ring. The rhenium containing moiety is then introduced by removal of the methoxy group at C-1 using water in acidic conditions. Application of the above glycosidation conditions with Re oxo dimethyglycyl-t-butylglycyl-cysteinyl-glycyl-4- δ hydroxypropyl produces a library of rhenium containing glycosides. These are then tested in biological assays and the most promising mixtures deconvoluted by the parallel synthesis of each of the single compounds in the mixture. 46
Example 30: Construction of a solid phase library of 1,000 metallocarbohydrates for use as imaging agents
Where R represents diversity groups as outlined in the procedure
Well established methods for organic synthesis are used to obtain a library of molecules having restrained conformation by virtue of a carbohydrate backbone. Hence glucosamine is protected as its Fmoc derivative by treatment with Fmoc-CI and sodium bicarbonate in aqueous dioxane. The resulting protected amine is then treated with 3-hydroxypropionic acid and Dowex 50W-X8 in benzene according to the procedure of Lin et. al. Journal of the American Chemical Society 1992, 114, 10138 to give 2-fluorenylmethylcarbamoyl-1-(3-carboxypropyloxy)-glucosamine This amino acid is then attached to sasrin resin using standard chemistry by coupling with HOBT/HBTU and N,N-diisopropylethylamιπe in NMP to provide a resin having the glucose attached via a propyl group at C-1. According to the procedure of M. J. Sofia, Journal of Organic Chemistry, 1998, 63, 2802 the resin so prepared is then treated with sodium hydride in tetrahydrofurn in the presence of the following to prepare a library of molecules substituted at C-3, C-4, and C-5 by ether linkages; 3- iodopropane, benzyliodide, 3-iodopropanol, 3-bromopropylamine, propargyl bromide, 2-bromomethylnaphthalene, δ-bromo-2-methyl-2-pentene, perfluoropropyl iodide, bromomethylcyclopropane, and 2-(2-bromoethyl)-2,δ,δ-trimethyl-1 ,3-dioxane. This solid phase library is then treated with 20% piperidine in NMP to remove the Fmoc group from the C-2 amino functionality and the resulting resin treated with a solution of ReO-N,N,-dimethylglycine-ser-cys-gly-tetrafluorophenyl ester to provide the solid phase library. This library is then liberated from the solid support by treatment with 50% TFA in dichloromethane. Removal of the TFA and dichloromethane under vacuum followed by lyophilisation provides the metaliocarbohydrate library.
Example 31 : Biological assays
MATERIALS AND METHODS:
Animals and Reagents. Sprague-Dawley rats weighing 300-350 g were purchased from Charles River-Bausch & Lomb Laboratories (St.Constant, Quebec).
Procedures followed standard Animal Care Committee protocols. The following drugs were used in this study: fMLP, N-t-BOC-methionyl-leucyl-phenylalanine (N-t-
BOC-MLP), cytochalasin B, oyster shell glycogen, polyethyienimine, o- δ phenylenediamine (OPD), H202 and H2SO4 (Sigma Chemical Corp., St. Louis, MO) and 3H-fMLP (New England Nuclear, Boston, MA). Peptide fMLP derivatives, N- formyl-norleucyl — tyrosyl-lysine (For-Nle-LP-Nle-YK) and iso-boc-MLFK were synthesized in-house by Resolution Pharmaceuticals Inc. (Mississauga, ON).
0 Neutrophil isolation. Animals were sacrificed via administration of CO2 4 hours after injection of 10 mL of 0.δ% oyster glycogen. Leukocytes were harvested by performing peritoneal lavage using 30 mL of Hanks' buffered salt solution (HBSS-) containing 10 mM ethylene-diaminetetra-acetic acid (EDTA) disodium salt. The volume of fluid recovered from each rat was approximately 20-26 mL and bloody 6 lavages were discarded.
Neutrophils isolated by peritoneal lavage were washed twice in HBSS-
(without calcium chloride, magnesium chloride and magnesium sulfate). A cold H20
RBC lysis was then performed with the addition of 9 mL of sterile ice-cold H20 and 1 0 mL of phosphate buffered saline (PBS) solution containing 0.1 M phosphate buffer,
0.027 M KCI and 1.37 M NaCI. White blood cell differential stain was used to identify neutrophils and viability of cells was confirmed on the basis of trypan blue exclusion.
Neutrophil fMLP receptor binding assays. fMLP saturation binding experiments used to determine KD values were carried out with 2.6 X 105 PMNs per sample suspended in a final volume of 160 uL of fMLP, 3H-fMLP and/or HBSS+. Samples were done in quadruplicate and non-specific binding was assessed in the presence of 10 uM fMLP and 3H-fMLP in the range of 1 nM to 160 nM. Total binding was evaluated following the addition of 3H-fMLP in the concentration range of 1 nM to 150 nM.
Competition assays were conducted with 6 nM 3H-fMLP in addition to the nonradioactive competing ligand added at 10 uM and 1.0 uM. Total binding in the competition assays was assessed in the presence of 1.0 x 106 PMNs per sample while non-specific binding was determined in the absence of cells.
After a 1 hour incubation period on ice, the samples were vacuum aspirated onto 1.0 urn Skatron filter mats which had been pre-treated with poiyethylenimine for approximately 24 hours. Sample wells received two consecutive 12 second washes with 0.9 % saline solution and collected filters were counted for 2 minutes in δ mL of liquid scintillation fluid.
Measurement of Myeioperoxidase release. O.δ x 106 PMNs per sample were incubated in 96-well Millipore Multiscreen 0.66 urn filter plates. In a final volume of 160 uL, 60 uL of the respective fMLP analogues (10 L/M to 1 pM) and/or fMLP (10 t/M to 1.0 i/M) were incubated with isolated PMNs pretreated with cytochalasin B (δ ug/mL) for 10 minutes. Following a 30 minute incubation period at room temperature, the supernatant was collected into a standard polypropylene plate with the Millipore vacuum apparatus. Supernatant samples were subsequently incubated with 60 uL o-phenylenediamine (OPD) containing H202 and HBSS+ for 2 minutes followed by the addition of 2.6M H2SO4. O.D.490 values were obtained with the Thermomax Microplate Reader.
Graph Showing % fMLP remaining after challenge with mixtures of compounds prepared in Examples 18-24
Competition Binding of Libraries with fMLP
70
Lit Drary
According to the above assays, library RPδδ3-capped-17 was selected for further deconvolution.
Although the invention has been described with preferred embodiments, it is to be understood that modifications may be resorted to as will be apparent to those skilled in the art. Such modifications and variations are to be considered within the purview and scope of the present invention. References (all references are herein incorporated by reference) 1 Howard-Lock, H. E., Lock, C J L in Comprehensive Coordination Chemistry,
Wilkinson, G , Gillard, R , McCleverty, J A , Eds , Pergamon New York, 1987; Vol. 6, Ch 62.2, p 7δδ δ 2 Abrams, M J ; Murrer, B A Science 1993, 261, 726
3 Swanson, D P , Chilton, H. M , Thrall, J H , Eds , Pharmaceuticals in Medical Imaging, MacMillan Publishing New York, 1990
4 Howell, S B Eds , Platinium and Other Metal Coordination Compounds in Cancer Chemotherapy, Pergamon New York, 1991 0 δ Sundquist, W I , Lippard, S J Coord Chem Rev 1990, 100, 293
6 Kelland, L R , Clarke, S J , McKeage, M J Platinum Met Rev 1992, 36, 178
7 Barnham, K. J , Frey, U , Murdoch, P S Ranford, J D , Sadler, P J , Newell, D R J Am. Chem Soc 1994, 116, 11175 δ 8 Christodoulou, J., Sadler, P J , Tucker, A FEBS Lett 1995, 376, 1
9 Razi, M T , Otiko, G , Sadler, P J in Platinum Gold and Other Metal Chemotherapeutic Agents Lippard, S J , Eds ACS Symposium Series 209, American Chemical Society Washington DC 1983, p 371
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Claims

WE CLAIM:
1. A library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (1): A-(B)n-C (1) wherein: A is a chelator complexed to a metal or a metal radionuclide or a chelator moiety capable of complexing a metal; B is a spacer group; n is selected from the integers 0 and 1 ; and
C comprises one of a plurality of potential targeting molecules.
2. The library of claim 2, wherein A is a chelator moiety capable of binding a δ metal selected from the group comprising polyamino polycarboxylates, polyamino polyphenolates, polyazamacrocycles with or without pendent coordination groups, tetradentate NXS4 X ligands, polyamino polysulfides, polyamino polyphosphates, polyamino polyheterocyclics, and derivatives or combinations thereof. 0
A library according to claim 1 , wherein A is a metal chelator of the general formula:
0 wherein, 62
X is a linear or branched, saturated or unsaturated C,.6 alkyl chain that is optionally interrupted by one or two heteroatoms selected from N, O, and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C,.6 alkyl, aryl and C(O)Z; Y is H or a substituent defined by X,
Z is the position of attachment for the targeting portion of the library; R1 through R are selected independently from H; carboxyl; C.,_4 alkyl; C^ alkyl substituted with a group selected from hydroxyl, amino, sulfhydryl, halogen, carboxyl, C,.4 alkoxycarbonyl and aminocarbonyl; an alpha carbon side chain of a D- or L- ammo acid other than proline, and C(O)Z;
R5 is selected from H and a sulphur protecting group; and T is carbonyl or CH2.
4. A library according to claim 3, wherein A is a metal chelator selected from the group comprising N,N-dimethylglycιne-ser-cys-gly or N,N-dimethylglycine- tertbutylglycine-cys-gly.
5. A library according to claim 3 wherein A is a chelator complexed to a metal or metal radionuclide.
6. A library according to claim δ, wherein A is selected from the group comprising polyamino polycarboxylates, polyamino polyphenolates, polyazamacrocycles with or without pendent coordination groups, tetradentate NXS4.X ligands, polyamino polysulfides, polyamino polyphosphates, polyamino polyheterocyclics and derivatives or combinations thereof.
7. A library according to claim 5 wherein A is of the general formula:
X is a linear or branched, saturated or unsaturated C,.6 alkyl chain that is optionally interrupted by one or two heteroatoms selected from N, O, and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C,.6 alkyl, aryl and C(O)Z;
Y is H or a substituent defined by X;
Z is the position of attachment for the targeting portion of the library;
R1 through R4 are selected independently from H; carboxyl; C,_4 alkyl; C1J( alkyl substituted with a group selected from hydroxyl, amino, sulfhydryl, halogen, carboxyl, C 4 alkoxycarbonyl and aminocarbonyl; an alpha carbon side chain of a D- or L- amino acid other than proline, and C(0)Z;
T is carbonyl or CH2; and M is metal.
8. A library according to claim δ wherein A is selected from the group comprising: N, N-dimethylglycine-ser-cys-gly or N, N-dimethylglycine- tertbutylglycine-cys-gly.
9. A library according to claim δ wherein the metal is selected from the group comprising: Sc, Ti, V, Cr, Mn, Fe, Co, Ni, Cu, Zn, Ga, Sr, Y, Zr, Nb, Mo, Tc, Ru, Rh, Pd, Ag, Cd, In, Hf, Ta, W, Re, Os, Ir, Pt, Au, Hg, TI, Pb, Bi, La, Ce, Pr, Nd, Pm, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, Lu. 64
A library according to claim 5 wherein wherein the metal radionuclide is selected from the group comprising 99mTc, 99Tc, 64Cu, 67Cu, 97Ru, 109Pd, 86Re, 188Re, 111ln, 113mln, 153Gd, 90Y, 153Sm, 166Ho, 198Au, 199Au, 90Sr, 89Sr, 105Rh, 201TI, 51Cr, 67Ga, 57Co, 60Co
A library according to claim 5 wherein wherein the metal radionuclide is selected from the group comprising 99mTc, 186Re, 188Re, 53Sm, 111ln, 90Y, 166Ho
A library according to claim 1 wherein C comprises one of a plurality of potential targeting molecules showing either agonist or antagonist activity selected from the group comprising proteins, peptides, nucleotides, oligonucleotides, sacchandes, ohgosacchaπdes, steroids, cyclic peptides, peptidomimetics, enzyme substrates and inhibitors and small organic molecules (acyclic, cyclic and heterocyc c)
A library according to claim 1 wherein C comprises one of a plurality of potential targeting molecules selected from the group comprising peptides, sacchandes, cyclic peptides, peptidomimetics and small organic molecules
A library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (11) (W)m-X-(Y)n-Z (11)
Wherein W is selected from a group comprising a) a metal binding moiety, b) a chelator moiety capable of binding a metal selected from polyamino polycarboxylates, polyamino poiyphenolates, polyazamacrocycles with or without pendent coordination groups, tetradentate NxS4 x ligands, polyamino polysulfides, polyamino polyphosphates, polyamino polyheterocyclics and derivatives or combinations of the above, c) a metal chelator of the general formula;
X is a linear or branched, saturated or unsaturated C^ alkyl chain that is optionally interrupted by one or two heteroatoms selected from N,
O,and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C1 6 alkyl, aryl and C(O)Z;
Y is H or a substituent defined by X;
Z is the position of attachment for the targeting portion of the library;
R1 through R are selected independently from H; carboxyl; C^ alkyl;
C,.4 alkyl substituted with a group selected from hydroxyl, amino, sulfhydryl, halogen, carboxyl, C1 4 alkoxycarbonyl and aminocarbonyl; an alpha carbon side chain of a D- or L- amino acid other than proline; and C(O)Z;
R5 is selected from H and a sulphur protecting group; and
T is carbonyl or CH2;
d) a metal chelator selected from N,N-dimethyglycine-ser-cys- gly or N,N-dimethylglycine-tertbutylglycine-cys-gly; and e) a chelator complexed to a metal or metal radionuclide;
X is a multiple chelator binding moiety capable of coupling to at least one metal binding moiety;
Y is a spacer group is selected from the integers 0 and 1 ;
Z comprises a mixture of potential targeting moieties; m is greater than or equal to 1 ; and n is selected from the integers 0 and 1.
15. A library according to claim 14, wherein W is a chelator complexed to a metal or metal radionuclide of the general formula:
wherein,
X is a linear or branched, saturated or unsaturated C^ alkyl chain that is optionally interrupted by one or two heteroatoms selected from N, O.and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C, 6 alkyl, aryl and C(O)Z;
Y is H or a substituent defined by X,
Z is the position of attachment for the targeting portion of the library;
R1 through R4 are selected independently from H; carboxyl; C^ alkyl, C 4 alkyl substituted with a group selected from hydroxyl, amino, sulfhydryl, halogen, carboxyl, C^ alkoxycarbonyl and aminocarbonyl; an alpha carbon side chain of a D- or L- ammo acid other than proline; and C(O)Z;
T is carbonyl or CH2; and M is a metal.
16. A library according to claim 14, wherein the metal is selected from the group comprising: Mn, Fe and Gd.
17. A library according to 14, wherein Z is selected from the group comprising proteins, peptides, nucleotides, oligonucleotides, saccharides, oligosaccharides, steroids, cyclic peptides, peptidomimetics and small organic molecules showing either agonist or antagonist activity. 18. A method for the synthesis of a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula 1 : A-(B)n-C (1) wherein: A is a chelator moiety capable of complexing a metal; B is a spacer group; n is selected from the integers 0 and 1 ; and
C comprises one of a plurality of potential targeting molecules.
comprising of the steps of: (1) Preparing a mixture of potential targeting molecules using combinatorial synthesis;
(I I) Attaching to the mixture a metal chelating moiety capable of complexing a metal; and
(I I I ) Complexing the mixture with a solution of the metal in a suitable solvent
19. A method for the synthesis of a library comprising one or more sets of compounds, each set comprising a mixture of compounds of formula (1 ): A-(B)n-C (1) wherein: A is a chelator moiety capable of complexing a metal; B is a spacer group; n is selected from the integers 0 and 1 ; and
C comprises one of a plurality of potential targeting molecules.
comprising the steps of: (I) Preparing a mixture of potential targeting molecules using combinatorial synthesis; and
(I I) Attaching to the mixture a preformed metal complex as an activated reagent in a suitable solvent.
20. A method of obtaining a compound having a desired targeting property comprising the steps of:
(I) providing a mixture which comprises a set of candidate compounds of formula (1): A-(B)n-C (1) wherein;
A is a chelator complexed to a metal or metal nuclide
B is a spacer group; n is selected from the integers 0 and 1 ; and C is one of a plurality of potential targeting molecules; and
(I I) selecting from amongst the set of candidate compounds a compound having the desired property by exposing the mixture of candidate compounds to a substance to which the compound having the desired targeting property will preferentially bind.
21. A method according to claim 20 wherein;
A is a chelator moiety capable of binding a metal selected from the group comprising polyamino polycarboxylates, polyamino polyphenolates, polyazamacrocycles with or without pendent coordination groups, tetradentate NXS4.X ligands, polyamino polysulfides, polyamino polyphosphates, polyamino polyheterocyclics and derivatives or combinations of the above. A method according to claim 20 wherein,
A is a metal chelator of the general formula,
wherein,
X is a linear or branched, saturated or unsaturated C, 6 alkyl chain that is optionally interrupted by one or two heteroatoms selected from N, O,and S, and is optionally substituted by at least one group selected from hydroxyl, am o, carboxyl, C, 6 alkyl, aryl and C(O)Z,
Y is H or a substituent defined by X
Z is the position of attachment for the targeting portion of the library R1 through R4 are selected independently from H, carboxyl, C1 4 alkyl, C,^ alkyl substituted with a group selected from hydroxyl, ammo, sulfhydryl, halogen, carboxyl, C1 4 alkoxycarbonyl and aminocarbonyl, an alpha carbon side chain of a D- or L- ammo acid other than proline, and C(O)Z,
R5 ιs selected from H and a sulphur protecting group, and T is carbonyl or CH2
A method according to claim 20 wherein,
A is a metal chelator selected from the group comprising N,N- dimethyglycine-ser-cys-gly and N,N-dιmethylglycιne-tertbutylglycιne- cys-gly
24. A method of obtaining a labeled compound for the purposes of therapy, radiotherapy or diagnostic imaging, having a desired targeting property comprising the steps of;
(1) providing one or more sets of mixtures which comprises a mixture of candidate compounds of formula (1): A-(B)n-C (1) wherein; A is a chelator complexed to a metal or metal nuclide;
B is a spacer group, n is selected from the integers 0 and 1 ; and C is one of a plurality of potential targeting molecules; and
(11) selecting from among the set of candidate compounds a compound having the desired property by exposing the mixture of candidate compounds to a substance to which the compound having the desired targeting property will preferentially bind.
25. A method according to claim 24 wherein,
A is a metal complex of a chelator selected from the group comprising polyamino polycarboxylates, polyamino polyphenolates, polyazamacrocycles with or without pendent coordination groups, tetradentate NXS4.X ligands, polyamino polysulfides, polyamino polyphosphates, polyamino polyheterocyclics and derivatives or combinations thereof.
26. A method according to claim 24 wherein; A is a metal complex of the general formula;
wherein, X is a linear or branched, saturated or unsaturated C1 6 alkyl chain that is optionally interrupted by one or two heteroatoms selected from N, O, and S; and is optionally substituted by at least one group selected from hydroxyl, amino, carboxyl, C^ alkyl, aryl and C(O)Z;
Y is H or a substituent defined by X; Z is the position of attachment for the targeting portion of the library;
R through R4are selected independently from H; carboxyl; C^ alkyl;
C^ alkyl substituted with a group selected from hydroxyl, amino, sulfhydryl, halogen, carboxyl, C,.4 alkoxycarbonyl and aminocarbonyl; an alpha carbon side chain of a D- or L- amino acid other than proline; and C(O)Z;
T is carbonyl or CH2; and
M is a metal
27. A method according to claim 24 wherein;
A is a metal chelator selected from the group comprising N,N- dimethyglycine-ser-cys-gly and N,N-dimethylglycine-tertbutylglycine- cys-gly.
28. A method of obtaining a compound having a desired targeting property comprising the steps of; (1) providing a mixture or set of mixtures which comprises a set of candidate compounds of formula (11 ):
(W)m-X-(Y)n-Z (11) wherein: W is a metal binding moiety;
X is a multiple chelator binding moiety capable of coupling to at least one metal binding moiety; Y is a spacer group is selected from the integers 0 and 1 ; and Z comprises a mixture of potential targeting moieties; m is greater than or equal to 1 ; and n is selected from the integers 0 and 1 ; and
(11) selecting from among the set of compounds a compound having the desired targeting property by exposing the mixture of compounds to a substance to which the compound having a desired targeting property will preferentially bind. 29. A method of obtaining a molecule having a desired targeting property comprising the steps of:
(1) preparing a mixture or set of mixtures of candidate compounds of general formula (1):
A-(B)n-C (1) wherein; A is a chelator complexed to a non-radioactive metal which is isostructural with an analogous complex of a radioactive metal; B is a spacer group; n is selected from the integers 0 and 1 ; and C is one of a plurality of potential targeting molecules; I I) selecting from among the set of candidates a compound having the desired targeting property by exposing the mixture of candidate compounds to a substance to which the compound will preferentially bind; and
(I I I) preparing the isostructural radioactive analogue of the selected candidate having the desired targeting property.
30. A method for the synthesis of a library comprising one or more sets of compounds comprising the steps of:
(I) Selecting a suitable targeting molecule for binding a biological target;
(II) Preparing a library of non-radioactive rhenium-targeting molecule conjugates;
(III) Dividing mixtures of the conjugates into separate wells;
(IV) Assaying the mixtures for binding affinity to the biological target;
(V) Deconvoluting the mixtures having a high a binding affinity for said biological target; and
(VI) Isolating a series of discrete compounds having a high a binding affinity for said biological target.
31. A method according to claim 30 further comprising the steps of:
(I) Substituting non-radioactive rhenium for radioactive technetium which isostructural to the non-radioactive rhenium; and
(II) Delivering the technetium-targeting molecule conjugates for radiolabelling development in in vivo studies.
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