EP0968205A1 - Process for the preparation of 2- (2-pyridinyl)methyl]sulfinyl]-1h-benzimidazoles and novel compounds of use for such purpose - Google Patents
Process for the preparation of 2- (2-pyridinyl)methyl]sulfinyl]-1h-benzimidazoles and novel compounds of use for such purposeInfo
- Publication number
- EP0968205A1 EP0968205A1 EP98902961A EP98902961A EP0968205A1 EP 0968205 A1 EP0968205 A1 EP 0968205A1 EP 98902961 A EP98902961 A EP 98902961A EP 98902961 A EP98902961 A EP 98902961A EP 0968205 A1 EP0968205 A1 EP 0968205A1
- Authority
- EP
- European Patent Office
- Prior art keywords
- compound
- process according
- general formula
- carried out
- formula
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
- 150000001875 compounds Chemical class 0.000 title claims abstract description 89
- 238000000034 method Methods 0.000 title claims abstract description 30
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 title claims description 29
- -1 2-pyridinyl Chemical group 0.000 title claims description 21
- 125000000475 sulfinyl group Chemical group [*:2]S([*:1])=O 0.000 title claims description 16
- 238000002360 preparation method Methods 0.000 title claims description 13
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 claims abstract description 14
- 150000003839 salts Chemical class 0.000 claims abstract description 14
- 125000004793 2,2,2-trifluoroethoxy group Chemical group FC(CO*)(F)F 0.000 claims abstract description 8
- HBDKFZNDMVLSHM-UHFFFAOYSA-N 2-(pyridin-2-ylmethylsulfinyl)-1h-benzimidazole Chemical class N=1C2=CC=CC=C2NC=1S(=O)CC1=CC=CC=N1 HBDKFZNDMVLSHM-UHFFFAOYSA-N 0.000 claims abstract description 8
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 claims abstract description 8
- 125000000623 heterocyclic group Chemical group 0.000 claims abstract description 6
- 125000000217 alkyl group Chemical group 0.000 claims abstract description 5
- 125000005843 halogen group Chemical group 0.000 claims abstract description 5
- 125000000449 nitro group Chemical group [O-][N+](*)=O 0.000 claims abstract description 5
- 125000002373 5 membered heterocyclic group Chemical group 0.000 claims abstract description 4
- 125000004070 6 membered heterocyclic group Chemical group 0.000 claims abstract description 4
- NINIDFKCEFEMDL-UHFFFAOYSA-N Sulfur Chemical compound [S] NINIDFKCEFEMDL-UHFFFAOYSA-N 0.000 claims abstract description 4
- 125000003710 aryl alkyl group Chemical group 0.000 claims abstract description 4
- 125000003118 aryl group Chemical group 0.000 claims abstract description 4
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical compound [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 claims abstract description 4
- 125000004432 carbon atom Chemical group C* 0.000 claims abstract description 4
- 125000005842 heteroatom Chemical group 0.000 claims abstract description 4
- 229910052757 nitrogen Inorganic materials 0.000 claims abstract description 4
- 239000001301 oxygen Substances 0.000 claims abstract description 4
- 229910052760 oxygen Inorganic materials 0.000 claims abstract description 4
- 239000011593 sulfur Substances 0.000 claims abstract description 4
- 229910052717 sulfur Inorganic materials 0.000 claims abstract description 4
- 125000006552 (C3-C8) cycloalkyl group Chemical group 0.000 claims abstract 2
- 125000004786 difluoromethoxy group Chemical group [H]C(F)(F)O* 0.000 claims abstract 2
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 claims description 24
- 230000003647 oxidation Effects 0.000 claims description 21
- 238000007254 oxidation reaction Methods 0.000 claims description 21
- 239000002904 solvent Substances 0.000 claims description 18
- 238000006243 chemical reaction Methods 0.000 claims description 17
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 claims description 15
- 239000003795 chemical substances by application Substances 0.000 claims description 13
- WKBOTKDWSSQWDR-UHFFFAOYSA-N Bromine atom Chemical compound [Br] WKBOTKDWSSQWDR-UHFFFAOYSA-N 0.000 claims description 12
- GDTBXPJZTBHREO-UHFFFAOYSA-N bromine Substances BrBr GDTBXPJZTBHREO-UHFFFAOYSA-N 0.000 claims description 12
- 229910052794 bromium Inorganic materials 0.000 claims description 12
- 239000003638 chemical reducing agent Substances 0.000 claims description 7
- LPNYRYFBWFDTMA-UHFFFAOYSA-N potassium tert-butoxide Chemical compound [K+].CC(C)(C)[O-] LPNYRYFBWFDTMA-UHFFFAOYSA-N 0.000 claims description 7
- MHAJPDPJQMAIIY-UHFFFAOYSA-N Hydrogen peroxide Chemical class OO MHAJPDPJQMAIIY-UHFFFAOYSA-N 0.000 claims description 6
- 239000001257 hydrogen Substances 0.000 claims description 6
- 229910052739 hydrogen Inorganic materials 0.000 claims description 6
- 238000011065 in-situ storage Methods 0.000 claims description 6
- ILVXOBCQQYKLDS-UHFFFAOYSA-N pyridine N-oxide Chemical compound [O-][N+]1=CC=CC=C1 ILVXOBCQQYKLDS-UHFFFAOYSA-N 0.000 claims description 6
- 239000002253 acid Substances 0.000 claims description 5
- QAWTYRYXDYHQNU-UHFFFAOYSA-N diazathiane Chemical compound NSN QAWTYRYXDYHQNU-UHFFFAOYSA-N 0.000 claims description 5
- 230000001590 oxidative effect Effects 0.000 claims description 5
- 125000000113 cyclohexyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 claims description 4
- 230000001476 alcoholic effect Effects 0.000 claims description 3
- 229910052783 alkali metal Inorganic materials 0.000 claims description 3
- 150000001340 alkali metals Chemical class 0.000 claims description 3
- 239000002585 base Substances 0.000 claims description 3
- 239000003054 catalyst Substances 0.000 claims description 3
- 239000000460 chlorine Substances 0.000 claims description 3
- 229960002163 hydrogen peroxide Drugs 0.000 claims description 3
- 150000004965 peroxy acids Chemical group 0.000 claims description 3
- YBBRCQOCSYXUOC-UHFFFAOYSA-N sulfuryl dichloride Chemical compound ClS(Cl)(=O)=O YBBRCQOCSYXUOC-UHFFFAOYSA-N 0.000 claims description 3
- LMBFAGIMSUYTBN-MPZNNTNKSA-N teixobactin Chemical compound C([C@H](C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CO)C(=O)N[C@H](CCC(N)=O)C(=O)N[C@H]([C@@H](C)CC)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CO)C(=O)N[C@H]1C(N[C@@H](C)C(=O)N[C@@H](C[C@@H]2NC(=N)NC2)C(=O)N[C@H](C(=O)O[C@H]1C)[C@@H](C)CC)=O)NC)C1=CC=CC=C1 LMBFAGIMSUYTBN-MPZNNTNKSA-N 0.000 claims description 3
- CJHVBHJGOJQBGE-UHFFFAOYSA-N 3-oxo-[1,2,4]thiadiazolo[4,5-a]benzimidazol-1-one Chemical compound O=c1[nH]s(=O)c2nc3ccccc3n12 CJHVBHJGOJQBGE-UHFFFAOYSA-N 0.000 claims description 2
- OMPJBNCRMGITSC-UHFFFAOYSA-N Benzoylperoxide Chemical class C=1C=CC=CC=1C(=O)OOC(=O)C1=CC=CC=C1 OMPJBNCRMGITSC-UHFFFAOYSA-N 0.000 claims description 2
- ZAMOUSCENKQFHK-UHFFFAOYSA-N Chlorine atom Chemical compound [Cl] ZAMOUSCENKQFHK-UHFFFAOYSA-N 0.000 claims description 2
- PXHVJJICTQNCMI-UHFFFAOYSA-N Nickel Chemical compound [Ni] PXHVJJICTQNCMI-UHFFFAOYSA-N 0.000 claims description 2
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical compound OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 claims description 2
- URSZSEKGTAKAAW-UHFFFAOYSA-N [1,2,4]thiadiazolo[4,5-a]benzimidazol-1-one Chemical compound C1=CC=C2N3C(=O)NSC3=NC2=C1 URSZSEKGTAKAAW-UHFFFAOYSA-N 0.000 claims description 2
- 125000003785 benzimidazolyl group Chemical group N1=C(NC2=C1C=CC=C2)* 0.000 claims description 2
- 235000019400 benzoyl peroxide Nutrition 0.000 claims description 2
- 229910052801 chlorine Inorganic materials 0.000 claims description 2
- 229910052500 inorganic mineral Inorganic materials 0.000 claims description 2
- 239000011707 mineral Substances 0.000 claims description 2
- 239000001117 sulphuric acid Substances 0.000 claims description 2
- 235000011149 sulphuric acid Nutrition 0.000 claims description 2
- 125000005207 tetraalkylammonium group Chemical class 0.000 claims description 2
- 125000005270 trialkylamine group Chemical group 0.000 claims description 2
- 125000004435 hydrogen atom Chemical class [H]* 0.000 claims 2
- XCRBXWCUXJNEFX-UHFFFAOYSA-N peroxybenzoic acid Chemical class OOC(=O)C1=CC=CC=C1 XCRBXWCUXJNEFX-UHFFFAOYSA-N 0.000 claims 1
- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 claims 1
- 230000015572 biosynthetic process Effects 0.000 abstract description 5
- 238000003786 synthesis reaction Methods 0.000 abstract description 5
- 239000000543 intermediate Substances 0.000 abstract description 4
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 56
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 45
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 33
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 31
- 229960001701 chloroform Drugs 0.000 description 28
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 27
- 239000000047 product Substances 0.000 description 22
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 21
- 239000002244 precipitate Substances 0.000 description 18
- 238000003756 stirring Methods 0.000 description 18
- 239000000725 suspension Substances 0.000 description 16
- CIPMQPTWGWCBLF-UHFFFAOYSA-N chembl382387 Chemical compound C=1C(CC(=O)O)=CC(C=2NC3=CC=CC=C3N=2)=C(O)C=1C1=CC=CC([N+]([O-])=O)=C1 CIPMQPTWGWCBLF-UHFFFAOYSA-N 0.000 description 14
- QZVDQETYNOBUPJ-UHFFFAOYSA-N 6-methoxy-2-[(4-methoxy-3,5-dimethyl-1-oxidopyridin-1-ium-2-yl)methylsulfinyl]-1h-benzimidazole Chemical compound N=1C2=CC(OC)=CC=C2NC=1S(=O)CC1=C(C)C(OC)=C(C)C=[N+]1[O-] QZVDQETYNOBUPJ-UHFFFAOYSA-N 0.000 description 13
- 239000012071 phase Substances 0.000 description 13
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 12
- BZLVMXJERCGZMT-UHFFFAOYSA-N Methyl tert-butyl ether Chemical compound COC(C)(C)C BZLVMXJERCGZMT-UHFFFAOYSA-N 0.000 description 9
- 239000011541 reaction mixture Substances 0.000 description 9
- NHQDETIJWKXCTC-UHFFFAOYSA-N 3-chloroperbenzoic acid Chemical compound OOC(=O)C1=CC=CC(Cl)=C1 NHQDETIJWKXCTC-UHFFFAOYSA-N 0.000 description 8
- 238000001035 drying Methods 0.000 description 8
- MJIHNNLFOKEZEW-UHFFFAOYSA-N lansoprazole Chemical compound CC1=C(OCC(F)(F)F)C=CN=C1CS(=O)C1=NC2=CC=CC=C2N1 MJIHNNLFOKEZEW-UHFFFAOYSA-N 0.000 description 8
- SUBDBMMJDZJVOS-UHFFFAOYSA-N 5-methoxy-2-{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl}-1H-benzimidazole Chemical compound N=1C2=CC(OC)=CC=C2NC=1S(=O)CC1=NC=C(C)C(OC)=C1C SUBDBMMJDZJVOS-UHFFFAOYSA-N 0.000 description 7
- IXCSERBJSXMMFS-UHFFFAOYSA-N hydrogen chloride Substances Cl.Cl IXCSERBJSXMMFS-UHFFFAOYSA-N 0.000 description 7
- 229910000041 hydrogen chloride Inorganic materials 0.000 description 7
- 239000000203 mixture Substances 0.000 description 7
- OBGHBYDDJGHGNS-UHFFFAOYSA-N 2-[[3-methyl-1-oxido-4-(2,2,2-trifluoroethoxy)pyridin-1-ium-2-yl]methylsulfinyl]-1h-benzimidazole Chemical compound CC1=C(OCC(F)(F)F)C=C[N+]([O-])=C1CS(=O)C1=NC2=CC=CC=C2N1 OBGHBYDDJGHGNS-UHFFFAOYSA-N 0.000 description 6
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 6
- YNAVUWVOSKDBBP-UHFFFAOYSA-N Morpholine Chemical compound C1COCCN1 YNAVUWVOSKDBBP-UHFFFAOYSA-N 0.000 description 6
- PMZURENOXWZQFD-UHFFFAOYSA-L Sodium Sulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 6
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 6
- 238000001816 cooling Methods 0.000 description 6
- 229960003174 lansoprazole Drugs 0.000 description 6
- VLKZOEOYAKHREP-UHFFFAOYSA-N n-Hexane Chemical compound CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 description 6
- 239000012074 organic phase Substances 0.000 description 6
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 description 6
- QLSLFFFIHPBPKZ-UHFFFAOYSA-N 4-morpholin-4-ylsulfanylmorpholine Chemical compound C1COCCN1SN1CCOCC1 QLSLFFFIHPBPKZ-UHFFFAOYSA-N 0.000 description 5
- LRHPLDYGYMQRHN-UHFFFAOYSA-N N-Butanol Chemical compound CCCCO LRHPLDYGYMQRHN-UHFFFAOYSA-N 0.000 description 5
- OTXQUGSUXRBUTC-UHFFFAOYSA-N butan-1-ol;toluene Chemical compound CCCCO.CC1=CC=CC=C1 OTXQUGSUXRBUTC-UHFFFAOYSA-N 0.000 description 5
- 229960000381 omeprazole Drugs 0.000 description 5
- CSCPPACGZOOCGX-UHFFFAOYSA-N Acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 description 4
- KFZMGEQAYNKOFK-UHFFFAOYSA-N Isopropanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 4
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 4
- 239000013078 crystal Substances 0.000 description 4
- KQWGXHWJMSMDJJ-UHFFFAOYSA-N cyclohexyl isocyanate Chemical compound O=C=NC1CCCCC1 KQWGXHWJMSMDJJ-UHFFFAOYSA-N 0.000 description 4
- 238000004128 high performance liquid chromatography Methods 0.000 description 4
- QOKLTUZRQYHMKW-UHFFFAOYSA-N n-cyclohexyl-5-methoxy-2-sulfanylidene-3h-benzimidazole-1-carboxamide Chemical compound S=C1NC2=CC(OC)=CC=C2N1C(=O)NC1CCCCC1 QOKLTUZRQYHMKW-UHFFFAOYSA-N 0.000 description 4
- PODWXQQNRWNDGD-UHFFFAOYSA-L sodium thiosulfate pentahydrate Chemical compound O.O.O.O.O.[Na+].[Na+].[O-]S([S-])(=O)=O PODWXQQNRWNDGD-UHFFFAOYSA-L 0.000 description 4
- JOXZAMWCPXYFKC-UHFFFAOYSA-N 4-methoxy-2,3,5-trimethyl-1-oxidopyridin-1-ium Chemical compound COC1=C(C)C=[N+]([O-])C(C)=C1C JOXZAMWCPXYFKC-UHFFFAOYSA-N 0.000 description 3
- WVDDGKGOMKODPV-UHFFFAOYSA-N Benzyl alcohol Chemical compound OCC1=CC=CC=C1 WVDDGKGOMKODPV-UHFFFAOYSA-N 0.000 description 3
- QGJOPFRUJISHPQ-UHFFFAOYSA-N Carbon disulfide Chemical compound S=C=S QGJOPFRUJISHPQ-UHFFFAOYSA-N 0.000 description 3
- 229910052784 alkaline earth metal Inorganic materials 0.000 description 3
- 238000001914 filtration Methods 0.000 description 3
- 235000011167 hydrochloric acid Nutrition 0.000 description 3
- 229960000443 hydrochloric acid Drugs 0.000 description 3
- UEMUBQAKBBEBBG-UHFFFAOYSA-N n-cyclohexyl-2-sulfanylidene-3h-benzimidazole-1-carboxamide Chemical compound C12=CC=CC=C2NC(=S)N1C(=O)NC1CCCCC1 UEMUBQAKBBEBBG-UHFFFAOYSA-N 0.000 description 3
- UOCLXMDMGBRAIB-UHFFFAOYSA-N 1,1,1-trichloroethane Chemical compound CC(Cl)(Cl)Cl UOCLXMDMGBRAIB-UHFFFAOYSA-N 0.000 description 2
- YHMYGUUIMTVXNW-UHFFFAOYSA-N 1,3-dihydrobenzimidazole-2-thione Chemical compound C1=CC=C2NC(S)=NC2=C1 YHMYGUUIMTVXNW-UHFFFAOYSA-N 0.000 description 2
- BTQQPSKHVXHHLC-UHFFFAOYSA-N 1-(2-amino-4-methoxyphenyl)-3-cyclohexylurea Chemical compound NC1=CC(OC)=CC=C1NC(=O)NC1CCCCC1 BTQQPSKHVXHHLC-UHFFFAOYSA-N 0.000 description 2
- FATJYTQFUNRCBK-UHFFFAOYSA-N 1-cyclohexyl-3-(4-methoxy-2-nitrophenyl)urea Chemical compound [O-][N+](=O)C1=CC(OC)=CC=C1NC(=O)NC1CCCCC1 FATJYTQFUNRCBK-UHFFFAOYSA-N 0.000 description 2
- YNQDTNFXKPJZLM-UHFFFAOYSA-N 1-piperidin-1-ylsulfanylpiperidine Chemical compound C1CCCCN1SN1CCCCC1 YNQDTNFXKPJZLM-UHFFFAOYSA-N 0.000 description 2
- NJTSUPZINPZXEB-UHFFFAOYSA-N 2-[(1-oxidopyridin-1-ium-2-yl)methylsulfinyl]-1h-benzimidazole Chemical compound [O-][N+]1=CC=CC=C1CS(=O)C1=NC2=CC=CC=C2N1 NJTSUPZINPZXEB-UHFFFAOYSA-N 0.000 description 2
- AVXPKRKFBUYRAV-UHFFFAOYSA-N 2-[(4-chloro-3,5-dimethyl-1-oxidopyridin-1-ium-2-yl)methylsulfinyl]-6-methoxy-1h-benzimidazole Chemical compound N=1C2=CC(OC)=CC=C2NC=1S(=O)CC1=C(C)C(Cl)=C(C)C=[N+]1[O-] AVXPKRKFBUYRAV-UHFFFAOYSA-N 0.000 description 2
- SOFMWKDCZRALQS-UHFFFAOYSA-N 2-cyclohexyl-3-oxo-[1,2,4]thiadiazolo[4,5-a]benzimidazol-1-one Chemical compound O=c1n(C2CCCCC2)s(=O)c2nc3ccccc3n12 SOFMWKDCZRALQS-UHFFFAOYSA-N 0.000 description 2
- QFMJFXFXQAFGBO-UHFFFAOYSA-N 4-methoxy-2-nitroaniline Chemical compound COC1=CC=C(N)C([N+]([O-])=O)=C1 QFMJFXFXQAFGBO-UHFFFAOYSA-N 0.000 description 2
- UHOVQNZJYSORNB-UHFFFAOYSA-N Benzene Chemical compound C1=CC=CC=C1 UHOVQNZJYSORNB-UHFFFAOYSA-N 0.000 description 2
- 101100493710 Caenorhabditis elegans bath-40 gene Proteins 0.000 description 2
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 2
- 238000001157 Fourier transform infrared spectrum Methods 0.000 description 2
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 description 2
- CPELXLSAUQHCOX-UHFFFAOYSA-N Hydrogen bromide Chemical compound Br CPELXLSAUQHCOX-UHFFFAOYSA-N 0.000 description 2
- FYYHWMGAXLPEAU-UHFFFAOYSA-N Magnesium Chemical compound [Mg] FYYHWMGAXLPEAU-UHFFFAOYSA-N 0.000 description 2
- CSNNHWWHGAXBCP-UHFFFAOYSA-L Magnesium sulfate Chemical compound [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 description 2
- KDLHZDBZIXYQEI-UHFFFAOYSA-N Palladium Chemical compound [Pd] KDLHZDBZIXYQEI-UHFFFAOYSA-N 0.000 description 2
- IQPSEEYGBUAQFF-UHFFFAOYSA-N Pantoprazole Chemical compound COC1=CC=NC(CS(=O)C=2NC3=CC=C(OC(F)F)C=C3N=2)=C1OC IQPSEEYGBUAQFF-UHFFFAOYSA-N 0.000 description 2
- NQRYJNQNLNOLGT-UHFFFAOYSA-N Piperidine Chemical compound C1CCNCC1 NQRYJNQNLNOLGT-UHFFFAOYSA-N 0.000 description 2
- ZLMJMSJWJFRBEC-UHFFFAOYSA-N Potassium Chemical compound [K] ZLMJMSJWJFRBEC-UHFFFAOYSA-N 0.000 description 2
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 2
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 2
- WQDUMFSSJAZKTM-UHFFFAOYSA-N Sodium methoxide Chemical compound [Na+].[O-]C WQDUMFSSJAZKTM-UHFFFAOYSA-N 0.000 description 2
- 150000007513 acids Chemical class 0.000 description 2
- 150000001342 alkaline earth metals Chemical class 0.000 description 2
- 239000012043 crude product Substances 0.000 description 2
- 125000004122 cyclic group Chemical group 0.000 description 2
- 238000001704 evaporation Methods 0.000 description 2
- 230000008020 evaporation Effects 0.000 description 2
- 150000008282 halocarbons Chemical class 0.000 description 2
- 150000002431 hydrogen Chemical class 0.000 description 2
- 239000011777 magnesium Substances 0.000 description 2
- 229910052749 magnesium Inorganic materials 0.000 description 2
- 239000012452 mother liquor Substances 0.000 description 2
- 238000005580 one pot reaction Methods 0.000 description 2
- 239000003208 petroleum Substances 0.000 description 2
- 239000011591 potassium Substances 0.000 description 2
- 229910052700 potassium Inorganic materials 0.000 description 2
- 239000000843 powder Substances 0.000 description 2
- 150000003222 pyridines Chemical class 0.000 description 2
- 238000001953 recrystallisation Methods 0.000 description 2
- 238000010992 reflux Methods 0.000 description 2
- RRFCKCAQHRITRG-UHFFFAOYSA-N sodium;5-methoxy-2-[(4-methoxy-3,5-dimethylpyridin-2-yl)methylsulfinyl]benzimidazol-3-ide;hydrate Chemical compound O.[Na+].N=1C2=CC(OC)=CC=C2[N-]C=1S(=O)CC1=NC=C(C)C(OC)=C1C RRFCKCAQHRITRG-UHFFFAOYSA-N 0.000 description 2
- 239000007858 starting material Substances 0.000 description 2
- FYSNRJHAOHDILO-UHFFFAOYSA-N thionyl chloride Chemical compound ClS(Cl)=O FYSNRJHAOHDILO-UHFFFAOYSA-N 0.000 description 2
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-Dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 1
- ZKQOQJTYYLMCDS-UHFFFAOYSA-N 1-hydroxy-2-(pyridin-2-ylmethylsulfinyl)benzimidazole Chemical compound N=1C2=CC=CC=C2N(O)C=1S(=O)CC1=CC=CC=N1 ZKQOQJTYYLMCDS-UHFFFAOYSA-N 0.000 description 1
- 238000005160 1H NMR spectroscopy Methods 0.000 description 1
- GMSURXZOJDDQEF-UHFFFAOYSA-N 2,3-dimethyl-1-oxido-4-(2,2,2-trifluoroethoxy)pyridin-1-ium Chemical compound CC1=C(C)[N+]([O-])=CC=C1OCC(F)(F)F GMSURXZOJDDQEF-UHFFFAOYSA-N 0.000 description 1
- QYXCUIHJKLYHRB-UHFFFAOYSA-N 2-[(4-methoxy-3,5-dimethyl-1-oxidopyridin-1-ium-2-yl)methylsulfinyl]-1h-benzimidazole Chemical compound COC1=C(C)C=[N+]([O-])C(CS(=O)C=2NC3=CC=CC=C3N=2)=C1C QYXCUIHJKLYHRB-UHFFFAOYSA-N 0.000 description 1
- CCHLMSUZHFPSFC-UHFFFAOYSA-N 2-[[3-methyl-4-(2,2,2-trifluoroethoxy)pyridin-2-yl]methylsulfanyl]-1h-benzimidazole Chemical compound CC1=C(OCC(F)(F)F)C=CN=C1CSC1=NC2=CC=CC=C2N1 CCHLMSUZHFPSFC-UHFFFAOYSA-N 0.000 description 1
- JCHUUGSCLQQQOM-UHFFFAOYSA-N 2-cyclohexyl-6-methoxy-3-oxo-[1,2,4]thiadiazolo[4,5-a]benzimidazol-1-one Chemical compound C=1C(OC)=CC=C2C=1N=C(S1=O)N2C(=O)N1C1CCCCC1 JCHUUGSCLQQQOM-UHFFFAOYSA-N 0.000 description 1
- HAANKFJLPBRUQT-UHFFFAOYSA-N 2-cyclohexyl-6-methoxy-[1,2,4]thiadiazolo[4,5-a]benzimidazol-1-one Chemical compound C=1C(OC)=CC=C(N2C3=O)C=1N=C2SN3C1CCCCC1 HAANKFJLPBRUQT-UHFFFAOYSA-N 0.000 description 1
- OEIVKNYMXKWILN-UHFFFAOYSA-N 4-chloro-2,3,5-trimethyl-1-oxidopyridin-1-ium Chemical compound CC1=C[N+]([O-])=C(C)C(C)=C1Cl OEIVKNYMXKWILN-UHFFFAOYSA-N 0.000 description 1
- KOFBRZWVWJCLGM-UHFFFAOYSA-N 5-methoxy-1,3-dihydrobenzimidazole-2-thione Chemical compound COC1=CC=C2NC(S)=NC2=C1 KOFBRZWVWJCLGM-UHFFFAOYSA-N 0.000 description 1
- OYPRJOBELJOOCE-UHFFFAOYSA-N Calcium Chemical compound [Ca] OYPRJOBELJOOCE-UHFFFAOYSA-N 0.000 description 1
- DGAQECJNVWCQMB-PUAWFVPOSA-M Ilexoside XXIX Chemical compound C[C@@H]1CC[C@@]2(CC[C@@]3(C(=CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H](C5(C)C)OS(=O)(=O)[O-])C)C)[C@@H]2[C@]1(C)O)C)C(=O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O.[Na+] DGAQECJNVWCQMB-PUAWFVPOSA-M 0.000 description 1
- WHXSMMKQMYFTQS-UHFFFAOYSA-N Lithium Chemical compound [Li] WHXSMMKQMYFTQS-UHFFFAOYSA-N 0.000 description 1
- 125000000815 N-oxide group Chemical group 0.000 description 1
- 150000001204 N-oxides Chemical class 0.000 description 1
- 238000005481 NMR spectroscopy Methods 0.000 description 1
- 241000700159 Rattus Species 0.000 description 1
- DKGAVHZHDRPRBM-UHFFFAOYSA-N Tert-Butanol Chemical compound CC(C)(C)O DKGAVHZHDRPRBM-UHFFFAOYSA-N 0.000 description 1
- YSVZGWAJIHWNQK-UHFFFAOYSA-N [3-(hydroxymethyl)-2-bicyclo[2.2.1]heptanyl]methanol Chemical compound C1CC2C(CO)C(CO)C1C2 YSVZGWAJIHWNQK-UHFFFAOYSA-N 0.000 description 1
- 125000002723 alicyclic group Chemical group 0.000 description 1
- 125000001931 aliphatic group Chemical group 0.000 description 1
- 239000003513 alkali Substances 0.000 description 1
- 235000019445 benzyl alcohol Nutrition 0.000 description 1
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 description 1
- 125000000484 butyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- 229910052791 calcium Inorganic materials 0.000 description 1
- 239000011575 calcium Substances 0.000 description 1
- 229940074993 carbon disulfide Drugs 0.000 description 1
- 238000002425 crystallisation Methods 0.000 description 1
- 150000001923 cyclic compounds Chemical class 0.000 description 1
- 125000001995 cyclobutyl group Chemical group [H]C1([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 description 1
- 125000000582 cycloheptyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 description 1
- 125000001511 cyclopentyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 description 1
- 125000001559 cyclopropyl group Chemical group [H]C1([H])C([H])([H])C1([H])* 0.000 description 1
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 1
- 239000000706 filtrate Substances 0.000 description 1
- 125000002541 furyl group Chemical group 0.000 description 1
- 230000027119 gastric acid secretion Effects 0.000 description 1
- 125000003187 heptyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- 125000004051 hexyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 229910000042 hydrogen bromide Inorganic materials 0.000 description 1
- 239000012535 impurity Substances 0.000 description 1
- 230000002401 inhibitory effect Effects 0.000 description 1
- ZXEKIIBDNHEJCQ-UHFFFAOYSA-N isobutanol Chemical compound CC(C)CO ZXEKIIBDNHEJCQ-UHFFFAOYSA-N 0.000 description 1
- 239000012948 isocyanate Substances 0.000 description 1
- 150000002513 isocyanates Chemical class 0.000 description 1
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 229910052744 lithium Inorganic materials 0.000 description 1
- 229910052943 magnesium sulfate Inorganic materials 0.000 description 1
- 235000019341 magnesium sulphate Nutrition 0.000 description 1
- 238000002844 melting Methods 0.000 description 1
- 230000008018 melting Effects 0.000 description 1
- 235000010755 mineral Nutrition 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- APVPOHHVBBYQAV-UHFFFAOYSA-N n-(4-aminophenyl)sulfonyloctadecanamide Chemical compound CCCCCCCCCCCCCCCCCC(=O)NS(=O)(=O)C1=CC=C(N)C=C1 APVPOHHVBBYQAV-UHFFFAOYSA-N 0.000 description 1
- 125000004108 n-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000000740 n-pentyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000004123 n-propyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000001624 naphthyl group Chemical group 0.000 description 1
- 125000002347 octyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- 229960005019 pantoprazole Drugs 0.000 description 1
- 125000001147 pentyl group Chemical group C(CCCC)* 0.000 description 1
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 description 1
- CFZKDDTWZYUZKS-UHFFFAOYSA-N picoline N-oxide Chemical compound CC1=CC=CC=[N+]1[O-] CFZKDDTWZYUZKS-UHFFFAOYSA-N 0.000 description 1
- BDERNNFJNOPAEC-UHFFFAOYSA-N propan-1-ol Chemical compound CCCO BDERNNFJNOPAEC-UHFFFAOYSA-N 0.000 description 1
- 125000001436 propyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 1
- 125000004076 pyridyl group Chemical group 0.000 description 1
- 238000007363 ring formation reaction Methods 0.000 description 1
- 238000007142 ring opening reaction Methods 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 239000011734 sodium Substances 0.000 description 1
- 229910052708 sodium Inorganic materials 0.000 description 1
- 239000011780 sodium chloride Substances 0.000 description 1
- 125000001544 thienyl group Chemical group 0.000 description 1
- 229950011585 timoprazole Drugs 0.000 description 1
- 150000003682 vanadium compounds Chemical class 0.000 description 1
- 238000005406 washing Methods 0.000 description 1
- NWONKYPBYAMBJT-UHFFFAOYSA-L zinc sulfate Chemical compound [Zn+2].[O-]S([O-])(=O)=O NWONKYPBYAMBJT-UHFFFAOYSA-L 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D401/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
- C07D401/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
- C07D401/12—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a chain containing hetero atoms as chain links
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D235/00—Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, condensed with other rings
- C07D235/02—Heterocyclic compounds containing 1,3-diazole or hydrogenated 1,3-diazole rings, condensed with other rings condensed with carbocyclic rings or ring systems
- C07D235/04—Benzimidazoles; Hydrogenated benzimidazoles
- C07D235/24—Benzimidazoles; Hydrogenated benzimidazoles with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached in position 2
- C07D235/28—Sulfur atoms
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D513/00—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00
- C07D513/02—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00 in which the condensed system contains two hetero rings
- C07D513/04—Ortho-condensed systems
Definitions
- the present invention relates to a process for the preparation of 2- [[ (2-pyridinyl) methyl] sulfinyl] -IH- benzimidazole derivatives of the general formula V
- R represents H, OCH 3 , 0CHF 2 or CF 3 ,
- R 3 represents H, CH 3 or 0CH 3 ,
- R 4 represents H, 0CH 3 , OCH 2 CF 3 , halo or nitro
- R 5 represents H, CH 3 or OCH 3 , and n is 0 or 1, and salts thereof.
- the invention relates to novel compounds of use for such purpose .
- the above mentioned compounds of formula V are biologically active and/or may be used as intermediates in the synthesis of biologically active compounds.
- the compounds of formula V wherein n is 1 are novel compounds.
- the present invention provides an elegant new synthesis for the preparation of these compounds, which proceeds in three steps via novel cyclic intermediates and provides the compounds in excellent yields. The three steps may even be carried out in situ as a one-pot process.
- the compounds of formula V, wherein n is 1, are converted into the corresponding compounds of formula V, wherein n is 0, by reduction.
- FR 2 567 123 Al includes no description of any other 2- [[ (l-oxido-2-pyridinyl) methyl] sulfinyl] -lH-benzimidazoles or their preparation. No conversion of the compound to the corresponding 2- [ [ (2-pyridinyl) methyl] sulfinyl] -IH-benzimidazole is described either.
- N-oxide being isolated or converted into lansoprazole .
- the present invention provides a new process for the preparation of 2- [[ (2-pyridinyl) methyl] sulfinyl] - IH-benzimidazole derivatives of the general formula V
- R 2 represents H, OCH 3 , 0CHF 2 or CF 3 ,
- R 3 represents H, CH 3 or OCH 3 ,
- R 4 represents H, OCH 3 , OCH 2 CF 3 , halo or nitro
- R 5 represents H, CH 3 or 0CH 3 , and n is 0 or 1, and salts thereof, which process comprises thhee sstteeppss ooff : ii)) ccyyccllii:zing a 2 , 3-diihhyyddrroo--22--tthhiiooxxoo--llHH--benzimida- zole-1-carboxamide of the g rre ⁇ neciraa ll f fo ⁇ rrmmunlla _a I T
- R 1 represents branched or straight C 1 _ a - alkyl, C 3 . 8 -cycloalkyl , aryl, aralkyl having 1-8 C-atoms in the alkyl moiety, or a 5- or 6-membered heterocyclic group having one, two or three hetero atoms selected from nitrogen, sulfur and oxygen in the heterocyclic ring
- R 2 have the same meanings as defined for formula V and is located in the 5- or 6-position of the benz- imidazole nucleus, by oxidation in a suitable solvent so as to form a 1, 2 , 4-thiadiazolo [4 , 5-a] benzimidazole-3 (2H) -one of the general formula II,
- R 1 and R 2 are as defined above, and the R 2 group is located in the 6- or 7 -position of the condensed ring, ii) oxidizing the obtained compound of formula II so as to form a 1 , 2 , 4-thiadiazolo [4 , 5-a] benzimidazole- 3 (2H) -one-1-oxide of the general formula III,
- R 1 and R 2 are as defined above, and the R 2 group is located in the 6- or 7 -position of the condensed ring, and iii) reacting the obtained compound of formula III with a pyridine-N-oxide of the general formula IV
- R 3 , R 4 and R 5 are as defined above, in the presence of an alcoholate, so as to form a 2-[(2- pyridinylmethyl) sulfinyl] -IH-benzimidazole derivative of the general formula Va
- R 2 , R 3 , R 4 and R 5 are as defined above, and, if desired, converting a compound obtained in free form into a salt thereof, or vice versa, a compound of any of the formulae I, II, III and Va, if desired, being converted into a different compound of said formula before the reaction in the next step is carried out, and furthermore, if desired, iv) reducing the obtained compound of formula Va or a salt thereof into a compound of the general formula Vb,
- R 2 , R 3 , R 4 and R 5 are as defined above, and, if desired, converting a compound obtained in free form into a salt thereof, or vice versa.
- the synthesis of addition products of the unsub- stituted benzimidazolinethione and isocyanates and the cyclization of the addition products by treatment with bromine/triethylamine, sulfurylchloride or thionyl- chloride has been described in Tetrahedron, Vol. 39, No. 13, pp. 2311 - 2314, (1983), D. Martin and F. Tittelbach, "Synthesen von Benzimidazolo [1, 2-d] (1,2,4)- thiadiazolinen” .
- the compounds of formula II wherein R 2 is other than hydrogen appear to be novel compounds and as such represent a particular aspect of the invention.
- the compounds of formula I wherein R 2 is other than hydrogen appear to be novel compounds and as such represent a particular aspect of the invention.
- the oxidation of sulphenamides into sulphinamides has been described in e.g. Houben-Weyl , " Methoden der Organischen Chemie", Vol. Ell, p. 655, (1985) and Patai, "The Chemistry of Sulphinic Acids", p. 259 and pp. 609-10 (1990).
- the compounds of formula III appear not only to be novel, but also to represent a novel cyclic structure.
- R 2 ; R J R 4 and R 5 are as defined above, are formed.
- R 1 represents branched or straight preferably such as methyl, ethyl, propyl , incl . n-propyl and i-propyl, butyl, incl. n-butyl, sec. -butyl and tert. -butyl, pentyl, incl. n-pentyl and tert . -pentyl , hexyl , heptyl and octyl, C 3 .
- R 1 group is not particularly critical as long as it allows the desired reactions to take place.
- a presently preferred R 1 group is cyclohexyl being easily obtainable through the commercially available cyclohexyliso- cyanate .
- the oxidative cyclisation in step i) is carried out in a suitable solvent, such as a halogenated hydrocarbon solvent, preferably chloroform, methylene chloride, 1 , 1 , 1-trichloroethane or a mixture thereof.
- a suitable solvent such as a halogenated hydrocarbon solvent, preferably chloroform, methylene chloride, 1 , 1 , 1-trichloroethane or a mixture thereof.
- any solvent allowing the desired reaction to take place may be used.
- the cyclisation is carried out using an oxidation agent, such as an oxidation agent selected from bromine, chlorine and sulfuryl chloride.
- an oxidation agent selected from bromine, chlorine and sulfuryl chloride.
- a base such as a trialkylamine base and preferably triethylamine, may be added.
- the cyclisation is carried out using bromine as oxidation agent followed by addition of triethylamine.
- the oxidative cyclisation will be carried out at a temperature from -20°C - 70°C, and preferably from 0°C - 40°C.
- step ii) the compound of formula II is oxidized into a compound of formula III using a suitable oxidation agent.
- a suitable oxidation agent such as oxidation agents selected from peracids, alkylhydroperoxides, benzoylperoxides, hydrogenperoxide, tetraalkylammonium meta-periodates and perborates, can be mentioned.
- the peracids are preferably optionally substituted perben- zoic acids, such as m-chloroperbenzoic acid.
- the oxidation in step ii) is carried out at a temperature from -70°C - 70°C, and preferably from -20°C - 30°C.
- the oxidation in step ii) is carried out in a suitable solvent, such as a halogenated hydrocarbon solvent, preferably chloroform, methylene chloride, 1,1,1- trichloroethane or a mixture thereof.
- a suitable solvent such as a halogenated hydrocarbon solvent, preferably chloroform, methylene chloride, 1,1,1- trichloroethane or a mixture thereof.
- any solvent allowing the desired reaction to take place may be used.
- the reaction of the compound of formula III with the pyridine-N-oxide of formula IV in step iii) is carried out in the presence of an alcoholate, such as an alkali or alkaline earth metal alcoholate of an aliphatic or alicyclic alcohol.
- an alcoholate such as an alkali or alkaline earth metal alcoholate of an aliphatic or alicyclic alcohol.
- Lithium, sodium and potassium are specific examples of the alkali metals and calcium and magnesium are specific examples of the alkaline earth metals which may be of use in the preparation of the alcoholate.
- Methanol , ethanol, n- propanol , i-propanol, n-butanol, i-butanol and t- butanol are specific examples of the aliphatic alcohols, and benzyl alcohol of the alicyclic alcohols which may be of use in the preparation of the alcoholate.
- a presently preferred alcoholate is an alkali metal alcoholate, particularly potassium t- butoxide.
- the reaction in step iii) is carried out at a temperature from -70°C - 50°C and preferably from -30°C - 30°C.
- suitable solvents for the reaction in step iii) are solvents of alkyl- or cycloalkylether type, such as tetrahydrofuran and dioxane, although any solvent allowing the reaction to take place may be used.
- all three steps i) , ii) and iii) or the steps i) and ii) , respectively ii) and iii) may be carried out in situ as a one-pot process.
- a compound of formula Va or a salt thereof as obtained by the above steps i) , ii) and iii) may be reduced into a compound of formula Vb using a suitable reducing agent, a compound of any of the formulae I, II, III and Va, if desired, being converted into a different compound of said formula before the reaction in the next step is carried out.
- reducing agents which may be of use for the reduction of a compound of formula Va into a compound of formula Vb
- thiobisamines diaminosul- fanes
- dialkoxysulfanes dialkoxysulfanes
- catalytical reduction agents such as RaNi/H 2 and Ru-catalysts/H 2
- the reduction is carried out using a thiobisamine and particularly thiobismorpholine or thiobispiperidine as reducing agent in the presence of an alcohol and an acid.
- the thiobisamines allow for selective reduction of the N-oxide group in the compounds of formula Va, whereby the compounds of formula Vb may be obtained in almost quantitative yield.
- the reaction takes place under mild conditions.
- the reduction can be carried out in an alcoholic solvent, such as in a meth- anolic and/or ethanolic solvent.
- the reaction will usually be carried out at a temperature in the range from -10°C - 40°C, although, in principle, there is no hindrance to using temperatures outside this range, such as temperatures in the ranges from -50°C - -10°C and from 40°C - 70°C.
- the thiobisamine is used in at least an equimolar ratio to the compound of formula Va, although the reaction may proceed at lower ratios such as at ratios of about 0.8.
- the reaction may proceed at lower ratios such as at ratios of about 0.8.
- molar ratios above 5.0 will normally be avoided.
- the molar ratio will not exceed 2.5 and in most cases the molar ratio will be in the range from 1.0 to 1.5.
- the reduction is carried out in the presence of a mineral acid, preferably hydrochloric acid and/or sulphuric acid.
- the hydrochloric acid may be added as a solution of hydrogen chloride in water, e.g.
- a solvent preferably an alcoholic solvent, such as a solution in methanol and/or ethanol .
- a solution of hydrogen bromide e.g. in an alcohol as mentioned above, may be used.
- the reduction is carried out in a methanolic and/or ethanolic solvent in the presence of hydrogen chloride under substantially anhydrous conditions.
- Example A N-Cyclohexyl -2 , 3-dihydro-5-methoxy-2- thioxo-lH-benzimidazole-1-carboxamide (from 4-methoxy- 2-nitroaniline) . N-Cyclohexyl-N' - (4-methoxy-2-nitrophenyl) urea.
- N-Cyclohexyl-N' - (2-amino-4-methoxyphenyl) urea N-Cyclohexyl-N' - (4-methoxy-2-nitrophenyl) urea .
- N-Cyclohexyl-N' - (4-methoxy-2-nitrophenyl) urea 50.0 g, 170 mmol) was suspended in ethanol (1.5 L) and 10% Palladium on Carbon (5.0 g) was added. The mixture was reduced with hydrogen at 1 atm. and room temperature overnight. Then the reaction mixture was heated to 70°C and the catalyst filtered off. The filtrate was evaporated to 400 mL and cooled to -20°C. The precipitate was filtered off, washed with ethanol and dried at 50°C to give 39.8 g (89 %) of the title compound as a white crystalline product. Mp . 187-88°C.
- N-Cyclohexyl-N' - (2 -amino-4 -methoxyphenyl ) urea (104.4 g, 397 mmol) and carbondisulfide (66.4 g, 874 mmol) were heated in dry DMF (400 mL) for 41 h at 50°C. The resulting solution was cooled to room temperature and added to water (1250 mL) over 1_ h. After further stirring for 2 h the precipitate was filtered off, washed with water and dried at 60°C to give 118.6 g (98 %) of the title compound as a white crystalline product. Mp. 188-90°C. Recrystallisation from acetone raised the melting point to 198-201°C.
- Example B N-Cyclohexyl-2 , 3-dihydro-2 -thioxo-lH- benzimidazole-1-carboxamide .
- N-Cyclohexyl-2 , 3 -dihydro-5-methoxy-2 - thioxo-lH- benzimidazole-1-carboxamide (91.6 g, 300 mmol) (Ex. A) was suspended in chloroform (1.1 L) at room temperature. Bromine (47.9 g, 300 mmol) in chloroform (150 mL) was added over 70 min. at room temperature. Triethylamine (60.6 g, 600 mmol) was added. The formed solution was allowed to cool to room temperature over 1 h and then washed with water (2x1 L) . The organic phase was dried over anhydrous sodium sulfate and evaporated in vacuum into a fat crystalline suspension.
- N-Cyclohexyl -2, 3 -dihydro-5-methoxy-2 -thioxo-lH- benzimidazole-1-carboxamide (9.16 g, 30 mmol) (Ex. A) was suspended in chloroform (100 mL) at room temperature. Bromine (4.80 g, 30 mmol) in chloroform (50 mL) was added over a period of 1 h at room temperature.
- Triethylamine (6.06 g, 60 mmol) was added. The formed solution was cooled to room temperature and washed with water (2x150 mL) . The organic phase was dried over anhydrous sodium sulfate and filtered. The above solution was cooled on an ice bath. 98 % m-CPBA (5.02 g, 29 mmol) was added in portions over 25 min. After further stirring for 40 min. chloroform was distilled off in vacuum. Remaining chloroform was removed by evaporation in vacuum with toluene to give a fat crystalline suspension.
- Example 4 was repeated, but using 1, 1 ' -thiobis- piperidine (synthesized from sodium thiosulfate penta- hydrate, bromine and piperidine as described by J. L. Kice et al, J. Org . Chem. 56 (1991) 5235-6) as the reducing agent. Yield 91%. Mp . 154-5°C (dec). Calc. for C 17 H 19 N 3 0 3 S : C:59.1%; H:5.6%; N:12.2%; S:9.3%. Found: C:59.1%; H:5.6%; N:12.2%; S:9.5%.
- Petroleum benzine (bp. 80-100°C) was added. The formed precipitate was filtered off, washed with petroleum benzine and dried in vacuum at 35°C to give 24.3 g (89 %) of the title compound as an off-white product. Mp . 202-6°C.
- acetic acid (4.8 g, 80 mmol) was added.
- the reaction mixture was evaporated in vacuum to a fat suspension (about 50 mL) and then 1-butanol-toluene (1:3) (80 mL) and water (150 mL) were added.
- the pH was adjusted to 12 with UN sodium hydroxide.
- the water phase was washed with further 1-butanol-toluene (1:3) (80 mL) and then adjusted to pH 7.7 by slowly addition of acetic acid.
- the resulting suspension was cooled on an ice bath.
- the precipitate was filtered off and washed with water. Drying at 50°C gave 7.0 g of the crude title compound.
- the formed suspension was extracted with 1-butanol-toluene (1:1) (120 mL) at 30 °C.
- the organic phase was dried over anhydrous sodium sulfate and then evaporated in vacuum to about 35 L. Cooling to 5°C, filtration, washing with 1- butanol and drying at 50 °C gave 2.41 g (77 %) of the title compound as a white crystalline product. Mp . 164- 5°C (dec.) .
- the title compound was prepared in 3 steps from N- cyclohexyl-2 , 3-dihydro-5-methoxy-2-thioxo-lH-benzimida- zole-1-carboxamide and 4-chloro-2 , 3 , 5-trimethyl-pyri- dine-N-oxide in 40 % yield essentially following the procedure described for omeprazole-N-oxide (Ex. 2) . Mp . 188-9°C (dec.) .
- the reaction mixture was poured into water (40 mL) , and pH was adjusted to 7.0 with acetic acid (1.35 mL) . Then chloroform (50 mL) was added. After separ- ation of the water phase, the chloroform phase was washed with water (2 x 50 mL) and dried over magnesium sulf te. After removal of the magnesium sulfate by filtering, hexane in excess (50 mL) was added. The reaction mixture was left for crystallisation for 1 h, after which the crystals were removed by filtering, washed with hexane (25 mL) and dried.
- the NMR data correspond to those of an authentic sample .
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Abstract
2-[[(2-pyridinyl)methyl]sulfinyl]-1H-benzimidazole derivatives of general formula (V) wherein R2 represents H, OCH¿3?, OCHF2 or CF3, R?3¿ represents H, CH¿3? or OCH3, R?4¿ represents H, OCH¿3?, OCH2CF3, halo or nitro, R?5¿ represents H, CH¿3? or OCH3, and n is 0 or 1, or salts thereof, are prepared by a new process proceeding via novel intermediates of general formulae (I), (II), (III) and (Va) wherein R?1¿ represents branched or straight C¿1-8?-alkyl, C3-8-cycloalkyl, aryl, aralkyl having 1-8 C-atoms in the alkyl moiety, or a 5- or 6-membered heterocyclic group having one, two or three hetero atoms selected from nitrogen, sulfur and oxygen in the heterocyclic ring. The compounds of formula (V) are biologically active and/or may be used as intermediates in the synthesis of biologically active compounds.
Description
Process for the preparation of 2- [[ (2 -pyridinyl)me- thyl] sulfinyl] -lH-benzimidazoles and novel compounds of use for such purpose.
The present invention relates to a process for the preparation of 2- [[ (2-pyridinyl) methyl] sulfinyl] -IH- benzimidazole derivatives of the general formula V
wherein
R represents H, OCH3, 0CHF2 or CF3,
R3 represents H, CH3 or 0CH3,
R4 represents H, 0CH3, OCH2CF3, halo or nitro,
R5 represents H, CH3 or OCH3, and n is 0 or 1, and salts thereof.
Furthermore, the invention relates to novel compounds of use for such purpose .
The above mentioned compounds of formula V are biologically active and/or may be used as intermediates in the synthesis of biologically active compounds.
The compounds, 5-methoxy-2- [ [ (4-methoxy-3 , 5- dimethyl-2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole (omeprazole) , 2- [ [ [4- (2 , 2 , 2-trifluoroethoxy) -3-methyl- 2 -pyridinyl] methyl] sulfinyl] -IH-benzimidazole (lanso- prazole) , 2- [[ (2-pyridinyl) methyl] sulfinyl] -IH-benzimidazole (timoprazole) and 5-difluoromethoxy-2- [ [ (3,4- dimethoxy-2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole (pantoprazole) , being known as gastric acid secretion inhibiting agents, are examples of biologically active compounds of the general formula V.
With a few exceptions, the compounds of formula V wherein n is 1, are novel compounds. The present invention provides an elegant new synthesis for the preparation of these compounds, which proceeds in three steps via novel cyclic intermediates and provides the compounds in excellent yields. The three steps may even be carried out in situ as a one-pot process. In an optional step of the process, the compounds of formula V, wherein n is 1, are converted into the corresponding compounds of formula V, wherein n is 0, by reduction. The unsubstituted compound of formula V, wherein n is 1, i.e. the compound 2- [[ (1-oxido-2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole, is described in FR 2 567 123 Al, Example 13, yet without indication of specific process details. FR 2 567 123 Al includes no description of any other 2- [[ (l-oxido-2-pyridinyl) methyl] sulfinyl] -lH-benzimidazoles or their preparation. No conversion of the compound to the corresponding 2- [ [ (2-pyridinyl) methyl] sulfinyl] -IH-benzimidazole is described either.
The compound of formula V wherein n is 1, R2 and R5 are hydrogen, R3 is methyl and R4 is 2 , 2 , 2-trifluoro- ethoxy, i.e. the compound 2- [ [ [4- (2 , 2 , 2-trifluoro- ethoxy) -3 -methyl -1-oxido-2 -pyridinyl] methyl] sulfinyl] - IH-benzimidazole (lansoprazole-N-oxide) , is described in ES 2 063 705 Bl as being obtained as an impurity when the compound 2- [ [ [4- (2 , 2 , 2-trifluoroethoxy) -3- methyl -2 -pyridinyl] methyl] thio] -IH-benzimidazole is oxidized into 2- [[ [4- (2 , 2 , 2-trifluoroethoxy) -3-methyl- 2-pyridinyl] methyl] sulfinyl] -IH-benzimidazole (lanso- prazole) , using m-chloroperbenzoic acid or hydrogen peroxide in the presence of vanadium compounds as oxidation agent. There is no mentioning of the N-oxide being isolated or converted into lansoprazole . Besides, the compound of formula V wherein n is 1,
R3 and R5 represent CH3, and R2 and R4 represent OCH3, i.e. the compound 5-methoxy-2- [ [ (4-methoxy-3 , 5- dimethyl-l-oxido-2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole (omeprazole-N-oxide) , has been reported as having been found as a metabolite of omeprazole in rats, CA 124:306394, Yakubutsu Dotai, 11(1), 45-56 (Japanese) 1996.
The present invention provides a new process for the preparation of 2- [[ (2-pyridinyl) methyl] sulfinyl] - IH-benzimidazole derivatives of the general formula V
wherein
R2 represents H, OCH3 , 0CHF2 or CF3,
R3 represents H, CH3 or OCH3,
R4 represents H, OCH3, OCH2CF3, halo or nitro,
R5 represents H, CH3 or 0CH3, and n is 0 or 1, and salts thereof, which process comprises thhee sstteeppss ooff : ii)) ccyyccllii:zing a 2 , 3-diihhyyddrroo--22--tthhiiooxxoo--llHH--benzimida- zole-1-carboxamide of the g rreαneciraa ll f fo Λrrmmunlla _a I T
wherein R1 represents branched or straight C1_a- alkyl, C3.8-cycloalkyl , aryl, aralkyl having 1-8 C-atoms
in the alkyl moiety, or a 5- or 6-membered heterocyclic group having one, two or three hetero atoms selected from nitrogen, sulfur and oxygen in the heterocyclic ring, and R2 have the same meanings as defined for formula V and is located in the 5- or 6-position of the benz- imidazole nucleus, by oxidation in a suitable solvent so as to form a 1, 2 , 4-thiadiazolo [4 , 5-a] benzimidazole-3 (2H) -one of the general formula II,
wherein R1 and R2 are as defined above, and the R2 group is located in the 6- or 7 -position of the condensed ring, ii) oxidizing the obtained compound of formula II so as to form a 1 , 2 , 4-thiadiazolo [4 , 5-a] benzimidazole- 3 (2H) -one-1-oxide of the general formula III,
wherein R1 and R2 are as defined above, and the R2 group is located in the 6- or 7 -position of the condensed ring, and iii) reacting the obtained compound of formula III with a pyridine-N-oxide of the general formula IV
wherein R3, R4 and R5 are as defined above, in the presence of an alcoholate, so as to form a 2-[(2- pyridinylmethyl) sulfinyl] -IH-benzimidazole derivative of the general formula Va
wherein R2, R3, R4 and R5 are as defined above, and, if desired, converting a compound obtained in free form into a salt thereof, or vice versa, a compound of any of the formulae I, II, III and Va, if desired, being converted into a different compound of said formula before the reaction in the next step is carried out, and furthermore, if desired, iv) reducing the obtained compound of formula Va or a salt thereof into a compound of the general formula Vb,
wherein R2, R3, R4 and R5 are as defined above, and, if desired, converting a compound obtained in free form into a salt thereof, or vice versa.
The synthesis of addition products of the unsub- stituted benzimidazolinethione and isocyanates and the cyclization of the addition products by treatment with bromine/triethylamine, sulfurylchloride or thionyl- chloride has been described in Tetrahedron, Vol. 39, No. 13, pp. 2311 - 2314, (1983), D. Martin and F. Tittelbach, "Synthesen von Benzimidazolo [1, 2-d] (1,2,4)- thiadiazolinen" . However, the compounds of formula II wherein R2 is other than hydrogen, appear to be novel compounds and as such represent a particular aspect of the invention. Also the compounds of formula I wherein R2 is other than hydrogen appear to be novel compounds and as such represent a particular aspect of the invention. The oxidation of sulphenamides into sulphinamides has been described in e.g. Houben-Weyl , " Methoden der Organischen Chemie", Vol. Ell, p. 655, (1985) and Patai, "The Chemistry of Sulphinic Acids", p. 259 and pp. 609-10 (1990). However, the compounds of formula III appear not only to be novel, but also to represent a novel cyclic structure. To our knowledge, the entire group of 1,2, 4-thiadiazolo [4, 5-a] "fused ring" -3 (H) -one- 1-oxides are compounds not having been described prior to the present invention. Thus, also the compounds of formula III represent a particular aspect of the invention.
By reaction of the novel cyclic compounds III with the pyridine-N-oxide of formula IV in the presence of an alcoholate, a ring opening takes place whereby the compounds of formula V, wherein n is 1, i.e. the compounds of the general formula Va
wherein R2 ; RJ R4 and R5 are as defined above, are formed.
To our knowledge, compounds of formula Va have not been used for the preparation of compounds of formula
Vb before, and accordingly the use of a compound of formula Va for such purpose represents a particular aspect of the invention.
The starting compounds of formula I, some of which are novel compounds, may be prepared using the synthesis described in the above mentioned Tetrahedron paper, starting from known compounds and/or from novel compounds, which may be obtained using art known processes . As mentioned above, R1 represents branched or straight
preferably
such as methyl, ethyl, propyl , incl . n-propyl and i-propyl, butyl, incl. n-butyl, sec. -butyl and tert. -butyl, pentyl, incl. n-pentyl and tert . -pentyl , hexyl , heptyl and octyl, C3.8-cycloalkyl , such as cyclopropyl, cyclo- butyl , cyclopentyl, cyclohexyl, cycloheptyl and cyclo- hexyl , aryl, such as optionally substituted phenyl or naphthyl, aralkyl having 1-8, preferably 1-6 C-atoms in the alkyl moiety, such as optionally substituted benzyl, or an optionally substituted 5- or 6-membered heterocyclic group having one, two or three hetero atoms selected from nitrogen, sulfur and oxygen in the heterocyclic ring. Specific examples of such groups are furyl , thienyl and pyridinyl . The nature of the R1 group is not particularly critical as long as it allows
the desired reactions to take place. A presently preferred R1 group is cyclohexyl being easily obtainable through the commercially available cyclohexyliso- cyanate . The oxidative cyclisation in step i) is carried out in a suitable solvent, such as a halogenated hydrocarbon solvent, preferably chloroform, methylene chloride, 1 , 1 , 1-trichloroethane or a mixture thereof. However, any solvent allowing the desired reaction to take place may be used.
The cyclisation is carried out using an oxidation agent, such as an oxidation agent selected from bromine, chlorine and sulfuryl chloride.
If desired, a base, such as a trialkylamine base and preferably triethylamine, may be added. In a presently preferred embodiment, the cyclisation is carried out using bromine as oxidation agent followed by addition of triethylamine.
In general the oxidative cyclisation will be carried out at a temperature from -20°C - 70°C, and preferably from 0°C - 40°C.
In step ii) the compound of formula II is oxidized into a compound of formula III using a suitable oxidation agent. As an example of suitable oxidation agents, the oxidation agents of peroxy-type, such as oxidation agents selected from peracids, alkylhydroperoxides, benzoylperoxides, hydrogenperoxide, tetraalkylammonium meta-periodates and perborates, can be mentioned. The peracids are preferably optionally substituted perben- zoic acids, such as m-chloroperbenzoic acid.
In general, the oxidation in step ii) is carried out at a temperature from -70°C - 70°C, and preferably from -20°C - 30°C.
As the oxidative cyclisation in step i) , the oxidation in step ii) is carried out in a suitable
solvent, such as a halogenated hydrocarbon solvent, preferably chloroform, methylene chloride, 1,1,1- trichloroethane or a mixture thereof. However, any solvent allowing the desired reaction to take place may be used.
The reaction of the compound of formula III with the pyridine-N-oxide of formula IV in step iii) is carried out in the presence of an alcoholate, such as an alkali or alkaline earth metal alcoholate of an aliphatic or alicyclic alcohol. Lithium, sodium and potassium are specific examples of the alkali metals and calcium and magnesium are specific examples of the alkaline earth metals which may be of use in the preparation of the alcoholate. Methanol , ethanol, n- propanol , i-propanol, n-butanol, i-butanol and t- butanol are specific examples of the aliphatic alcohols, and benzyl alcohol of the alicyclic alcohols which may be of use in the preparation of the alcoholate. A presently preferred alcoholate is an alkali metal alcoholate, particularly potassium t- butoxide.
In general, the reaction in step iii) is carried out at a temperature from -70°C - 50°C and preferably from -30°C - 30°C. Examples of suitable solvents for the reaction in step iii) are solvents of alkyl- or cycloalkylether type, such as tetrahydrofuran and dioxane, although any solvent allowing the reaction to take place may be used. In a particular aspect of the invention, all three steps i) , ii) and iii) or the steps i) and ii) , respectively ii) and iii) may be carried out in situ as a one-pot process.
If desired, a compound of formula Va or a salt thereof as obtained by the above steps i) , ii) and
iii) , may be reduced into a compound of formula Vb using a suitable reducing agent, a compound of any of the formulae I, II, III and Va, if desired, being converted into a different compound of said formula before the reaction in the next step is carried out.
As examples of reducing agents which may be of use for the reduction of a compound of formula Va into a compound of formula Vb, thiobisamines (diaminosul- fanes) , dialkoxysulfanes, and catalytical reduction agents such as RaNi/H2 and Ru-catalysts/H2 can be mentioned.
In a particularly preferred embodiment, the reduction is carried out using a thiobisamine and particularly thiobismorpholine or thiobispiperidine as reducing agent in the presence of an alcohol and an acid.
Many reducing agents have been suggested for use in the reduction of pyridine-N-oxides into pyridines, cf . e.g. the survey given in Houben-Weyl , "Methoden der Organischen Chemie", Vol. E7b, Part 2, (1992), pp. 543 - 557. However, as far as we know, thiobisamines have not hitherto been suggested for use in the reduction of pyridine-N-oxides into pyridines.
The thiobisamines allow for selective reduction of the N-oxide group in the compounds of formula Va, whereby the compounds of formula Vb may be obtained in almost quantitative yield.
As a further advantage, the reaction takes place under mild conditions. Thus, the reduction can be carried out in an alcoholic solvent, such as in a meth- anolic and/or ethanolic solvent. Furthermore, the reaction will usually be carried out at a temperature in the range from -10°C - 40°C, although, in principle, there is no hindrance to using temperatures outside this range, such as temperatures in the ranges from
-50°C - -10°C and from 40°C - 70°C.
Usually, the thiobisamine is used in at least an equimolar ratio to the compound of formula Va, although the reaction may proceed at lower ratios such as at ratios of about 0.8. There is no specific upper limit, but for economical reasons molar ratios above 5.0 will normally be avoided. Typically, the molar ratio will not exceed 2.5 and in most cases the molar ratio will be in the range from 1.0 to 1.5. In a preferred embodiment, the reduction is carried out in the presence of a mineral acid, preferably hydrochloric acid and/or sulphuric acid. The hydrochloric acid may be added as a solution of hydrogen chloride in water, e.g. as concentrated hydro- chloric acid or as a solution of hydrogen chloride in a solvent, preferably an alcoholic solvent, such as a solution in methanol and/or ethanol . Also a solution of hydrogen bromide, e.g. in an alcohol as mentioned above, may be used. In an embodiment being particularly preferred at present, the reduction is carried out in a methanolic and/or ethanolic solvent in the presence of hydrogen chloride under substantially anhydrous conditions.
The invention will now be further illustrated by specific examples which, however, should not be regarded as any limitation of the scope of the invention.
EXAMPLES ,
Preparation of starting materials,
Example A. N-Cyclohexyl -2 , 3-dihydro-5-methoxy-2- thioxo-lH-benzimidazole-1-carboxamide (from 4-methoxy- 2-nitroaniline) .
N-Cyclohexyl-N' - (4-methoxy-2-nitrophenyl) urea.
4-Methoxy-2-nitroaniline (150 g, 892 mmol) , cyclohexylisocyanate (112 g, 892 mmol) og pyridine (45 mL) were dissolved in DMF (dimethylformamide) (1.5 L) and heated to 80 °C for 8 h. The formed suspension was cooled to room temperature and ethanol (0.5 L) was added. After cooling on an ice bath, the precipitate was filtered off and washed with ethanol. Drying at 50°C afforded 227 g (87 %) of the title compound as a yellow product. Mp . 233-35°C.
N-Cyclohexyl-N' - (2-amino-4-methoxyphenyl) urea . N-Cyclohexyl-N' - (4-methoxy-2-nitrophenyl) urea (50.0 g, 170 mmol) was suspended in ethanol (1.5 L) and 10% Palladium on Carbon (5.0 g) was added. The mixture was reduced with hydrogen at 1 atm. and room temperature overnight. Then the reaction mixture was heated to 70°C and the catalyst filtered off. The filtrate was evaporated to 400 mL and cooled to -20°C. The precipitate was filtered off, washed with ethanol and dried at 50°C to give 39.8 g (89 %) of the title compound as a white crystalline product. Mp . 187-88°C.
N- Cyclohexyl -2 , 3 -dihydro-5-methoxy-2-thioxo-lH- benzimidazole-1-carboxamide .
N-Cyclohexyl-N' - (2 -amino-4 -methoxyphenyl ) urea (104.4 g, 397 mmol) and carbondisulfide (66.4 g, 874 mmol) were heated in dry DMF (400 mL) for 41 h at 50°C. The resulting solution was cooled to room temperature and added to water (1250 mL) over 1_ h. After further stirring for 2 h the precipitate was filtered off, washed with water and dried at 60°C to give 118.6 g (98 %) of the title compound as a white crystalline product. Mp. 188-90°C. Recrystallisation from acetone raised the melting point to 198-201°C.
Example B. N-Cyclohexyl-2 , 3-dihydro-2 -thioxo-lH- benzimidazole-1-carboxamide .
The title compound was synthesized from 2-mer- captobenzimidazole and cyclohexylisocyanate essentially following the procedure described by E. Dyer et al . , J. Heterocyclic Chem. 6 (1969) 23-28.
Examples illustrating the process according to the invention.
Example 1. 5-Methoxy-2 -[[ (4 -methoxy-3 , 5 -dimethyl - 1-oxido- 2 -pyridinyl) methyl] sulfinyl] IH-benzimidazole (Omeprazole-N-oxide) .
A. 2 -Cyclohexyl- 7-methoxy- 1 , 2 , -thiadiazolo ,4,5- a] benzimidazole-3 (2H) -one .
N-Cyclohexyl-2 , 3 -dihydro-5-methoxy-2 - thioxo-lH- benzimidazole-1-carboxamide (91.6 g, 300 mmol) (Ex. A) was suspended in chloroform (1.1 L) at room temperature. Bromine (47.9 g, 300 mmol) in chloroform (150 mL) was added over 70 min. at room temperature. Triethylamine (60.6 g, 600 mmol) was added. The formed solution was allowed to cool to room temperature over 1 h and then washed with water (2x1 L) . The organic phase was dried over anhydrous sodium sulfate and evaporated in vacuum into a fat crystalline suspension. Ethanol (1.0 L) was added. After cooling to 0°C the precipitate was filtered off, washed with ethanol and dried in vacuum at 35°C to give 87.0 g (96 %) of the title compound as an off-white product. Mp . 181-4°C. Calc. for C15H17N302S: C:59.4%; H:5.7%; N:13.9%; S:10.6%. Found: C:59.2%; H:5.8%; N:13.6%; S : 10.6% .
B . 2 -Cyclohexyl- 7-methoxy- 1 , 2 , 4-thiadiazolo [4,5- al benzimidazole-3 (2H) -one-1-oxide .
2 -Cyclohexyl -7 -methoxy- 1, 2, 4-thiadiazolo [4, 5 - a] benzimidazole-3 (2H) -one (24.3 g, 80 mmol) (Ex. 1A) was suspended in chloroform (160 mL) and cooled on an ice bath. 99% m-CPBA (m-chloroperbenzoic acid) (13.8 g, 80 mmol) was added in small portions over 45 min. at 2 - 5°C. Then the ice bath was replaced with a 2-propanol - ice bath. After further stirring for 20 min. cold t- butylmethylether (480 mL) was added over 15 min. After cooling to -9°C the precipitate was filtered off and washed with t -butylmethylether . Drying in vacuum at room temperature gave 20.6 g (81 %) of the title compound as a white product. Mp . 155-60°C. Calc. for C15H17N303S: C:56.4%; H:5.4%; N:13.2%; S:10.0%. Found: C:55.9%; H:5.4%; N:12.8%; S:9.8%.
C. 5-Methoxy-2- [ \ (4-methoxy-3 , 5-dimethyl -1-oxido- 2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole (Omepra- zole-N-oxide) .
2 -Cyclohexyl -7 -methoxy- 1 ,2,4-thiadiazolo [4, 5- a] benzimidazole-3 (2H) -one-1-oxide (19.2 g, 60 mmol) (Ex. IB) was suspended in dry tetrahydrofuran (200 mL) and cooled on an ice bath. Potassium-t-butylate (20.2 g, 180 mmol) was added in portions over 30 min. After further stirring for 5 min., 4-methoxy-2 , 3 , 5-trimethyl- pyridine-N-oxide (8.0 g, 48 mmol) was added. The dark green reaction mixture was stirred for 20 min., whereupon acetic acid (7.2 g, 120 mmol) was added. The suspension was evaporated in vacuum to about 100 mL, and the formed residue was dissolved in 1-butanol- toluene (1:4) (100 mL) - water (250 mL) . After adjusting the pH to 12 with IN sodium hydroxide the phases were separated. The water phase was slowly neutralized to pH 7.5 with acetic acid, whereby the title compound
precipitated. After cooling to 0°C the precipitate was filtered off, washed with water and dried to give 12.8 g of crude omeprazole-N-oxide. The crude product was stirred with methanol (150 mL) for 20 min. at room temperature and then cooled to -20°C. The precipitate was filtered off and dried at 60°C to give 11.1 g (64 %) of omeprazole-N-oxide as a white product. Mp . 177- 8°C (dec) .
Calc. for C17H19N304S : C:56.5%; H:5.3%; N:11.6%; S : 8.9% . Found: C:56.2%; H:5.4%; N:11.7%; S:9.2%.
Example 2. 5-Methoxy-2- [ (4-methoxy-3 , 5-dimethyl- l-oxido-2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole (Omeprazole N-oxide) (3 steps in situ) .
N-Cyclohexyl -2, 3 -dihydro-5-methoxy-2 -thioxo-lH- benzimidazole-1-carboxamide (9.16 g, 30 mmol) (Ex. A) was suspended in chloroform (100 mL) at room temperature. Bromine (4.80 g, 30 mmol) in chloroform (50 mL) was added over a period of 1 h at room temperature.
Triethylamine (6.06 g, 60 mmol) was added. The formed solution was cooled to room temperature and washed with water (2x150 mL) . The organic phase was dried over anhydrous sodium sulfate and filtered. The above solution was cooled on an ice bath. 98 % m-CPBA (5.02 g, 29 mmol) was added in portions over 25 min. After further stirring for 40 min. chloroform was distilled off in vacuum. Remaining chloroform was removed by evaporation in vacuum with toluene to give a fat crystalline suspension.
The above suspension was dissolved in dry tetrahydrofuran (150 mL) and cooled on an ice bath. Potassium- t-butylate (13.4 g, 120 mmol) was added in portions over 30 min. After further stirring for 10 min., 4- methoxy-2, 3 , 5-trimethyl-pyridine-N-oxide (5.52 g, 30
mmol) was added. The dark green reaction mixture was stirred for 15 min. , whereupon acetic acid was added (5.4 g, 90 mmol) . The suspension was evaporated in vacuum, and the formed residue was dissolved in chloro- form (100 mL) - water (100 mL) . The water phase was extracted with further chloroform (100 mL) . The chloroform phases were washed successively with aqueous 10% sodium chloride (50 mL) . The combined chloroform phases were dried over anhydrous sodium sulfate and evaporated in vacuum. The residue was taken up in methanol (100 mL) and cooled to -20°C. The precipitate was filtered off, washed with methanol and dried at 50 °C to give 4.68 g (43 % over 3 steps) of omeprazole-N-oxide as a white product. Mp . 172-3°C (dec).
Example 3. 5-Methoxy-2- \ \ (4-methoxy-3 , 5-dimethyl- 1-oxido-2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole (Omeprazole-N-oxide) (from mixed isomers) .
In a similar manner to the procedures described in examples 1 and 2, the title compound was obtained from a mixture of the N-cyclohexyl-2 , 3-dihydro-5- and -6- methoxy-2 - thioxo- IH-benzimidazole- 1 -carboxamides , prepared from 2-mercapto-5-methoxy-benzimidazole and cyclohexylisocyanate, essentially following the procedure described by E. Dyer et al . , J. Heterocyclic Chemistry 6 (1969) .23-28.
Example 4. 5-Methoxy-2- \ \ (4 -methoxy-3 , 5-dimethyl - 2-pyridinyl) methyl] sulfinyl] -IH-benzimidazole (Omeprazole) .
Pulverized omeprazole-N-oxide (3.61 g, 10.0 mmol)
(Ex. 1, 2 and 3) and 4 , 4 ' -thiobismorpholine (2.65 g, 13.0 mmol) (synthesized from sodium thiosulfate penta-
hydrate, bromine and morpholine as described by J. L. Kice et al, J. Org . Chem. 56 (1991) 5235-6) were suspended in methanol (70 mL) and cooled on an ice bath. 2.83 N hydrogen chloride in ethanol (7.4 mL, 21.0 mmol) was added. After stirring for 20 min., a clear yellowish solution was obtained. IN sodium hydroxide (20 mL) was added and the resulting solution was evaporated in vacuum to about 25 mL. To the residue was added water (100 mL) and t-butylmethylether (50 mL) . The pH was adjusted to 12 with IN sodium hydroxide. After stirring for 20 min. at pH 12, the phases were separated and acetic acid was added slowly to the water phase until a pH 7.8 was obtained. After stirring at room temperature the precipitate was filtered off, washed with water and dried at 50°C to give 3.24 g (94 %) of omeprazole as a beige coloured powder. Mp . 153- 4°C (dec.) . The FTIR-spectra of the product and an authentic sample were identical . Calc. for C17H19N303S : C:59.1%; H:5.6%; N:12.2%; S:9.3%. Found: C:59.1%; H:5.6%; N:12.1%; S:9.6%.
Preparation of Omeprazole sodium salt.
Omeprazole (3.45 g, 10.0 mmol) was suspended in methanol (15 mL) . Sodium methoxide (540 mg, 10.0 mmol) was added, whereby a new precipitate was formed. After addition of t-butylmethylether (50 mL) the precipitate was filtered off, washed with t-butylmethylether and dried to give 3.7 g of omeprazole sodium salt as a white product .
Example 5. 5-Methoxy-2- [ [ (4-methoxy-3 , 5-dimethyl- 2 -pyridinyl) methyl1 sulfinyl] -IH-benzimidazole (Omeprazole) .
Example 4 was repeated, but using 1, 1 ' -thiobis-
piperidine (synthesized from sodium thiosulfate penta- hydrate, bromine and piperidine as described by J. L. Kice et al, J. Org . Chem. 56 (1991) 5235-6) as the reducing agent. Yield 91%. Mp . 154-5°C (dec). Calc. for C17H19N303S : C:59.1%; H:5.6%; N:12.2%; S:9.3%. Found: C:59.1%; H:5.6%; N:12.2%; S:9.5%.
Example 6. 2- [ (2-pyridinylmethyl) sulfinyl] -1H- benzimidazole-N-oxide (Timoprazole-N-oxide) .
A. 2 -Cyclohexyl -1 , 2 , 4-thiadiazolo .4 , 5-a] benz- imidazole-3 (2H) -one.
N- Cyclohexyl -2 , 3 -dihydro-2 -thioxo- IH-benzimidazole- 1-carboxamide (27.5 g, 100 mmol) (Ex. B) was sus- pended in chloroform (400 mL) at room temperature. Bromine (16.0 g, 100 mmol) in chloroform (100 mL) was added over 50 min. at room temperature, whereupon triethylamine (20.2 g, 200 mmol) was added. The formed solution was cooled to room temperature and washed with water (2x300 mL) . The organic phase was dried over anhydrous sodium sulfate and then evaporated in vacuum (bath 25 °C) into a fat crystalline suspension. Petroleum benzine (bp. 80-100°C) was added. The formed precipitate was filtered off, washed with petroleum benzine and dried in vacuum at 35°C to give 24.3 g (89 %) of the title compound as an off-white product. Mp . 202-6°C.
B. 2- T (2 -pyridinylmethyl) sulfinyl] -lH-benzimida- zole-N-oxide (Timoprazole-N-oxide) (2 steps in situ) .
2 -Cyclohexyl -1, 2 , 4-thiadiazolo [4, 5-a] benzimida- zole-3 (2H) -one (8.2 g, 30 mmol) (Ex. 6A) was dissolved in chloroform (180 mL) and cooled on an ice bath. 99% m-CPBA (5.19 g, 30 mmol) was added in portions over 25 min. Chloroform was distilled off in vacuum (bath
40°C) , until a fat suspension was obtained. Remaining chloroform was removed by evaporation with toluene (100 mL) in vacuum.
The resulting fat suspension of crude "sulfinami- de" was dissolved in dry tetrahydrofuran (150 mL) and cooled on an ice bath. Potassium-t-butylate (13.4 g, 120 mmol) was added in portions over 15 min. After further stirring for 10 min., 2-picoline-N-oxide (4.4 g, 40 mmol) was added. The resulting reaction mixture was stirred for 30 min., whereupon acetic acid (5.4 g, 90 mmol) was added. The mixture was evaporated into a fat suspension in vacuum and then methanol (180mL) was added followed by cooling on an ice bath. The precipitate was filtered off, washed with methanol and dried at 50°C to give 5.05 g (62 % over 2 steps) of timopra- zole-N-oxide as an off-white product. Mp. 187-8°C (dec.) .
Calc. for C13H11N302S: C:57.1%; H:4.1%; N:15.4%; S:11.7%. Found: C:57.1%; H:4.1%; N:15.0%; S:11.6%.
Example 7. 2-Cyclohexyl -1 , 2 , 4-thiadiazolo [4 , 5- a] benzimidazole-3 (2H) -one-1-oxide .
2 - Cyclohexyl -1 , 2 , 4-thiadiazolo [4 , 5-a] benzimida- zole-3 (2H) -one (21.8 g, 80 mmol) (Ex. 6A) was dissolved in chloroform (300 mL) and cooled on an ice bath. 85% m-CPBA (16.2 g, 80 mmol) dissolved in chloroform (100 mL) was added over 35 min. The ice bath was removed and the temperature was allowed to rise to room temperature over 1 h. Chloroform was distilled off in vacuum and low temperature until a fat suspension was obtained.
Ethanol (250 mL) was added. After stirring on an ice bath the precipitate was filtered off and washed with cold ethanol. Drying at 30°C gave 20.1 g (87 %) of the title compound as a white product. Mp. 158-160°C.
Calc. for C14H15N302S: C:58.1%; H:5.2%; N:14.5%; S:ll.l%. Found: C:58.2%; H:5.3%; N:14.4%; S:11.2%.
Example 8. 2 -Cyclohexyl -1 , 2 , 4-thiadiazolo [4 , 5- a] benzimidazole-3 (2H) -one-1-oxide (2 steps in situ).
N- Cyclohexyl -2 , 3 -dihydro-2 -thioxo- IH-benzimidazole- 1-carboxamide (68.8 g, 250 mmol) (Ex. B) was suspended in chloroform (1.0 L) at room temperature. Bromine (40.0 g, 250 mmol) was added over 30 min. at 23-30°C. Triethylamine (50.5 g, 500 mmol) was added. The formed solution was cooled to room temperature and stirred for 1 h and then washed with water (2x500 mL) . The organic phase was dried over anhydrous sodium sulfate.
The above solution was cooled on an ice bath. 98 % m-CPBA (43.3 g, 250 mmol) dissolved in chloroform (200 mL) was added over 30 min. at 3-8°C. After further stirring for 30 min. chloroform was distilled off in vacuum (bath 40°C) until a fat suspension (about 250 mL) was obtained, t-Butylmethylether (1 L) was added. After cooling on an ice bath the precipitate was filtered off and washed with t-butylmethylether . Drying at 30°C in vacuum gave 61.2 g (85 % over 2 steps) of the title compound as an off-white product. Mp . 155- 7°C.
Calc. for C14H15N302S : C:58.1%; H:5.2%; N:14.5%; S:ll.l%. Found: C:58.6%; H:5.4%; N:14.4%; S:11.2%.
Example 9. 2- \ \ r3-methyl-4- (2 , 2 , 2-trifluoroethoxy) -1-oxido-2 -pyridinyl] methyl] sulfinyl] -IH-benzimidazole (Lansoprazole-N-oxide) .
2 -Cyclohexyl- 1, 2 , 4-thiadiazolo [4 , 5-a] benzimida- zole-3 (2H) -one-1-oxide (28.9 g, 100 mmol) (Ex. 7 and 8)
was dissolved in dry tetrahydrofuran (300 mL) and cooled on an ice bath. Potassium-t-butylate (28.0 g, 250 mmol) was added in portions over 40 min. After further stirring for 10 min. 2 , 3 -dimethyl -4- (2 , 2 , 2- trifluoroethoxy) pyridine-N-oxide (13.3 g, 60 mmol) was added. The reaction mixture was stirred for 15 min, whereupon acetic acid (9.0 g, 150 mmol) was added. The mixture was evaporated in vacuum, and the formed residue was dissolved in 1-butanol-toluene (2:3) (250 mL) - water (250 mL) and acetic acid was added until a pH of 7.0 was obtained. The phases were separated and the organic phase was evaporated. The formed fat suspension was taken up in methanol (200 mL) and cooled on an ice bath. The precipitate was filtered off and washed with methanol followed by water. Drying at 50°C gave 7.9 g of crude lansoprazole-N-oxide. The product was shortly heated to reflux in chloroform (100 mL) and then cooled to room temperature. The crystals were filtered off, washed with chloroform and dried to give 5.3 g (23 %) of lansoprazole-N-oxide as an off-white crystalline product. Mp . 183-3 °C (dec). Calc for C16H14F3N303S : C:49.9%; H:3.7%; N:10.9%; S:8.3% Found: C:50.3%; H:3.8%; N:10.8%; S:8.5%.
Example 10. 2- [ [3-methyl-4- (2 , 2 , 2-trifluoroethoxy) -2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole (Lansoprazole) .
Lansoprazole-N-oxide (3.85 g, 10.0 mmol) (Ex. 9) and 4 , 4 ' -thiobismorpholine (2.85 g, 14.0 mmol) (synthesized from sodium thiosulfate pentahydrate, bromine and morpholine as described by J. L. Kice et al , J. Org. Chem. 56 (1991) 5235-6) were suspended in methanol (80 L) at room temperature. 2.85 N hydrogen chloride in ethanol (8.4 mL, 24 mmol) was added over 3 min. After
stirring for 90 min. the formed solution was evaporated in vacuum to about 25 mL and water (100 mL) was added slowly. The pH was adjusted to 7.5 with IN sodium hydroxide. After stirring at room temperature the formed precipitate was filtered off and washed with water. Drying at 40°C gave 3.57 g (97 %) of a 94 % pure lansoprazole. Mp . 169-70°C (dec). Recrystallization from acetone gave analytically pure lansoprazole as a white crystalline product. Mp . 176-7°C (dec). The FTIR-spectra of the product and an authentic sample were identical.
Calc. for C16H14F3N302S: C:52.0%; H:3.8%; N:11.4%; S:8.7% Found: C:52.2%; H:4.0%; N:ll.l%; S:8.8%.
Example 11. 2- [ f (4-methoxy-3 , 5-dimethyl-l-oxido- 2-pyridinyl) methyl] sulfinyl] -IH-benzimidazole .
2-Cyclohexyl-l, 2 , 4 -thiadiazolo [ , 5-a] benzimida- zole-3 (2H) -one-1-oxide (11.6 g, 40 mmol) (Ex. 7 and 8) was suspended in dry tetrahydrofuran (150 mL) and cooled on an ice bath. Potassium-t-butylate (13.4 g, 120 mmol) was added in portions over 25 min. After further stirring for 5 min. 4-methoxy-2 , 3 , 5-trimethyl- pyridine-N-oxide (5.4 g, 24 mmol) was added. The dark green solution was stirred for 30 min. , whereupon acetic acid (4.8 g, 80 mmol) was added. The reaction mixture was evaporated in vacuum to a fat suspension (about 50 mL) and then 1-butanol-toluene (1:3) (80 mL) and water (150 mL) were added. The pH was adjusted to 12 with UN sodium hydroxide. The water phase was washed with further 1-butanol-toluene (1:3) (80 mL) and then adjusted to pH 7.7 by slowly addition of acetic acid. The resulting suspension was cooled on an ice bath. The precipitate was filtered off and washed with water. Drying at 50°C gave 7.0 g of the crude title
compound. The product was shortly stirred with methanol (80 mL) at room temperature and then cooled to -20°C. The product was filtered off, washed with methanol and dried at 50°C to give 6.3 g (59 %) of the title com- pound as an off-white powder. Mp . 183-4° (dec.) .
Calc for C16H17N303S : C:58.0%; H:5.2%; N:12.7%; S:9,7%. Found: C:57.9%; H:5.4%; N:12.8%; S:9.8%.
Example 12. 2- [ [ (4-methoxy-3 , 5 -dimethyl -2 -pyridi- nyl) methyl] sulfinyl] -IH-benzimidazole.
2- [ [ (4 -Methoxy-3, 5 -dimethyl -1-oxido-2 -pyridinyl) - methyl] sulfinyl] -IH-benzimidazole (3.31 g, 10.0 mmol)
(Ex. 11) and 4 , 4 ' -thiobismorpholine (2.86 g, 14.0 mmol) (synthesized from sodium thiosulfate pentahydrate, bromine and morpholine as described by J. L. Kice et al, J. Org. Chem. 56 (1991) 5235-6) were suspended in methanol (75 mL) and cooled on an ice bath. 2.83 N hydrogen chloride in ethanol (7.4 mL, 21.0 mmol) was added. The reaction was monitored by HPLC . After stirring for 1J_ h and 2y2 h further thiobismorpholine (0.82 g and 0.41 g) and 2.83 N hydrogen chloride in ethanol (2.8 mL and 1.4 mL) was added. After further stirring for 30 min. IN sodium hydroxide (33 mL) was added. The reaction mixture was evaporated in vacuum to about 35 mL and then water (100 mL) and t -butylmethylether (50 mL) were added. The pH was adjusted to 12 with IN sodium hydroxide. After stirring at pH 12.0 for 5 min. the phases were separated. The water phase was washed with t-butylmethylether (50 mL) and then acetic acid was added slowly until pH 8.0. The formed suspension was extracted with 1-butanol-toluene (1:1) (120 mL) at 30 °C. The organic phase was dried over anhydrous sodium sulfate and then evaporated in vacuum to about 35 L. Cooling to 5°C, filtration, washing with 1-
butanol and drying at 50 °C gave 2.41 g (77 %) of the title compound as a white crystalline product. Mp . 164- 5°C (dec.) .
Calc. for C16H17N302S: C:60.9%; H:5.4%; N:13.3%; S:10.2%. Found: C:61.1%; H:5.6%; N:13.3%; S:10.0%.
Another crop 0.21 g (7 %) of the title compound (96 % purity) could be obtained from the mother liquor.
Example 13. 5-Methoxy-2- \ \ (4-chloro-3 , 5-dimethyl- l-oxido-2-pyridinyl) methyl] sulfinyl] -IH-benzimidazole .
The title compound was prepared in 3 steps from N- cyclohexyl-2 , 3-dihydro-5-methoxy-2-thioxo-lH-benzimida- zole-1-carboxamide and 4-chloro-2 , 3 , 5-trimethyl-pyri- dine-N-oxide in 40 % yield essentially following the procedure described for omeprazole-N-oxide (Ex. 2) . Mp . 188-9°C (dec.) .
60MHz XH-NMR (d6-DMS0) : δ 2.2 (s, 3H, CH3) , δ 2.3
(s, 3H, CH3) , δ 3.8 (s, 3H, CH3) , δ 4.8 (broad s, 2H, CH2) , δ 6.7-7.0 (m, 2H) , δ 7.3-7.5 (m, IH) , δ 8.3 (IH).
Example 14.5-Methoxy-2- \ \ (4 -methoxy-3 , 5 -dimethyl - l-oxido-2-pyridinyl) methyl] sulfinyl] -IH-benzimidazole (Omeprazole N-oxide) .
A mixture of 5-methoxy-2- [[ (4-chloro-3 , 5-dimethyl - 1-oxido-2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole (2.196 g, 6 mmol) (Ex. 13), potassium tert . -butylate (3.36 g, 30 mmol), tert . -butyl ammonium bromide (5.76 g, 18 mmol) , methanol (36 mL) and dimethyl sulfoxide (12 mL) was heated to reflux for 18 h. HPLC chromato- gram (area %) indicates 67 % yield of 5-methoxy-2- [ [ (4- methoxy-3 , 5-dimethyl-1-oxido-2-pyridinyl) methyl] sulfinyl] -IH-benzimidazole and 6 % unconverted 5-methoxy-2 - [ [ (4-chloro-3 , 5-dimethyl -1-oxido-2 -pyridinyl) methyl] -
sulfinyl] -IH-benzimidazole.
The reaction mixture was poured into water (40 mL) , and pH was adjusted to 7.0 with acetic acid (1.35 mL) . Then chloroform (50 mL) was added. After separ- ation of the water phase, the chloroform phase was washed with water (2 x 50 mL) and dried over magnesium sulf te. After removal of the magnesium sulfate by filtering, hexane in excess (50 mL) was added. The reaction mixture was left for crystallisation for 1 h, after which the crystals were removed by filtering, washed with hexane (25 mL) and dried.
Yield of crude product: 844 mg of white crystals. Mp. 169 - 70 °C. Purity according to HPLC (area %) , 90 %. Calc. for C17H19N304S : C:56.5%; H:5.3%; N:11.6% Found: C:55.5%; H:5.1%; N:11.3%
The NMR data correspond to those of an authentic sample .
From the mother liquor a further crop of 131 mg of white crystals was isolated. Mp . 168 - 70 °C. Purity according to HPLC: 88.5 %.
Total yield 975 mg .
In the preceding the invention has been described by means of specific examples of preferred embodiments.
However, it will be appreciated by a person skilled in the art that various modifications can be made without deviating from the spirit and scope of the invention.
Claims
P A T E N T C L A I M S 1. A process for the preparation of 2- [ [ (2 -pyridinyl) methyl] sulfinyl] -IH-benzimidazole derivatives of the general formula V
wherein
R2 represents H, 0CH3, 0CHF2 or CF3 , R3 represents H, CH3 or OCH3,
R4 represents H, 0CH3, OCH2CF3, halo or nitro, R5 represents H, CH3 or OCH3, and n is 0 or 1, or salts thereof, c h a r a c t e r i z e d in comprising the steps of : i) cyclizing a 2 , 3-dihydro-2-thioxo-lH-benzimida- zole-1-carboxamide of the general formula I
wherein R1 represents branched or straight alkyl, C3_8-cycloalkyl , aryl, aralkyl having 1-8 C-atoms in the alkyl moiety, or a 5- or 6-membered heterocyclic group having one, two or three hetero atoms selected from nitrogen, sulfur and oxygen in the heterocyclic ring, and
R2 have the same meanings as defined for formula V and is located in the 5- or 6-position of the benz- imidazole nucleus, by oxidation in a suitable solvent so as to form a 1, 2 , 4-thiadiazolo [4, 5-a] benzimidazole-3 (2H) -one of the general formula II,
wherein R1 and R2 are as defined above, and the R2 group is located in the 6- or 7-position of the condensed ring, ii) oxidizing the obtained compound of formula II so as to form a 1, 2 , 4-thiadiazolo [4 , 5-a] benzimidazole- 3 (2H) -one-1-oxide of the general formula III,
wherein R1 and R2 are as defined above, and the R2 group is located in the 6- or 7 -position of the condensed ring, and iii) reacting the obtained compound of formula III with a pyridine-N-oxide of the general formula IV
wherein R3, R4 and R5 are as defined above, in the presence of an alcoholate, so as to form a 2- [ (2-pyri- dinylmethyl) sulfinyl] -IH-benzimidazole derivative of the general formula Va
wherein R2, R3, R4 and R5 are as defined above, and, if desired, converting a compound obtained in free form into a salt thereof, or vice versa, a compound of any of the formulae I, II, III and Va, if desired, being converted into a different compound of said formula before the reaction in the next step is carried out, and furthermore, if desired, iv) reducing the obtained compound of formula Va or a salt thereof into a compound of the general formula Vb,
wherein R2, R3, R4 and R5 are as defined above, and, if desired, converting a compound obtained in free form into a salt thereof, or vice versa.
2. A process according to claim 1, wherein the oxidation in step i) is carried out with an oxidation agent selected from bromine, chlorine and sulfuryl chloride.
3. A process according to claim 1 or 2 , wherein the oxidation in step i) is followed by addition of a trialkylamine base, preferably triethylamine.
4. A process according to one or more of the preceding claims, wherein the oxidation in step i) is carried out at a temperature from -20┬░C - 70┬░C, preferably from 0┬░C - 40┬░C.
5. A process according to one or more of the preceding claims, wherein the oxidation in step ii) is carried out using a peroxy-type oxidation agent.
6. A process according to claim 5, wherein the peroxy-type oxidation agent is selected from peracids, preferably optionally substituted perbenzoic acids, alkylhydroperoxides, benzoylperoxides, hydrogenper- oxide, tetraalkylammonium meta-periodates and perborates .
7. A process according to one or more of the preceding claims, wherein the oxidation in step ii) is carried out at a temperature from -70┬░C - 70┬░C, prefer- ably from -20┬░C - 30┬░C.
8. A process according to one or more of the preceding claims, wherein the alcoholate used in step iii) is an alkali metal alcoholate, preferably potassium t-butoxide.
9. A process according to one or more of the preceding claims, wherein the reaction in step iii) is carried out at a temperature from -70┬░C - 50┬░C, preferably from -30┬░C - 30┬░C.
10. A process according to one or more of the preceding claims, wherein the steps i) and ii) , the steps ii) and iii) or the steps i) , ii) and iii) are carried out in situ.
11. A process according to one or more of the preceding claims, wherein the reduction in step iv) is carried out using a thiobisamine, dialkoxysulfane,
RaNi/H2 or Ru-catalyst/H2 as reducing agent.
12. A process according to claim 11, wherein the reduction in step iv) is carried out using a thiobisamine as reducing agent .
13. A process according to claim 12, wherein the thiobisamine is used in a molar ratio to the compound of formula (Va) of 0.8 - 5.0, particularly in a molar ratio of 1.0 - 2.5 and preferably in a molar ratio of 1.0 - 1.5. 5
14. A process according to claim 12 or 13, wherein the reduction is carried out in an alcoholic solvent, preferably in a methanolic and/or ethanolic solvent .
15. A process according to one or more of claims 10 12 - 14, wherein the reduction is carried out in the presence of a mineral acid, preferably hydrochloric acid and/or sulphuric acid.
16. A process according to one or more of claims 12 - 15, wherein the reduction is carried out at a
15 temperature in the range from -50┬░C - 70┬░C, preferably in the range from -10 ┬░C - 40┬░C.
17. A compound of the general formula Va
wherein R2, R3, R4 and R5 are as defined above, or a 25 salt thereof, with the provisos that R2, R3, R4 and R5 are not all hydrogen, that when R3 is methyl and R4 is 2, 2, 2-trifluoroethoxy, then R2 and R5 are not both hydrogen, and that when R3 and R5 are both CH3, then R2 and R4 are not both 0CH3. 30 18. A compound according to claim 17, wherein
R2 represents 0CHF2, R3 and R4 represent 0CH3 and R5 represents H.
19. A compound according to claim 17, wherein R2 represents 0CH3, R3 and R5 represent CH3 and R4 35 represents Cl .
20. A compound of the general formula III,
wherein R1 and R2 are as defined above, and the R2 group is located in the 6- or 7-position of the con- densed ring.
21. A compound of the general formula II,
wherein R1 and R2 are as defined in claim 20, with the proviso that R2 is other than H, and wherein the R2 group is located in the 6- or 7-position of the condensed ring.
22. A compound of the general formula I,
wherein R1 and R2 are as defined in claim 21.
23. A compound according to claim 20, 21 or 22, wherein R1 is cyclohexyl.
24. The use of a compound of the general formula Va
wherein
R2 represents H, OCH3, OCHF2 or CF3,
R3 represents H, CH3 or OCH3,
R4 represents H, OCH3, OCH2CF3, halo or nitro, and
R5 represents H, CH3 or OCH3, or a salt thereof, for the preparation of a compound of the general formula Vb
wherein R2, R3 , R4 and R5 are as defined above, or a salt thereof.
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US6166213A (en) * | 1998-08-11 | 2000-12-26 | Merck & Co., Inc. | Omeprazole process and compositions thereof |
US6191148B1 (en) | 1998-08-11 | 2001-02-20 | Merck & Co., Inc. | Omerazole process and compositions thereof |
WO2002030886A2 (en) * | 2000-10-12 | 2002-04-18 | Matthews Barry R | Heterocyclic angiogenesis inhibitors |
WO2004056804A2 (en) | 2002-12-19 | 2004-07-08 | Teva Pharmaceutical Industries Ltd. | Solid states of pantoprazole sodium, processes for preparing them and processes for preparing known pantoprazole sodium hydrates |
EP1615913A2 (en) | 2003-06-10 | 2006-01-18 | Teva Pharmaceutical Industries Limited | Process for preparing 2-(pyridinyl)methyl sulfinyl-substituted benzimidazoles and novel chlorinated derivatives of pantoprazole |
SE0400410D0 (en) | 2004-02-20 | 2004-02-20 | Astrazeneca Ab | New compounds |
EP1921075B1 (en) * | 2006-10-30 | 2010-03-03 | Dipharma Francis S.r.l. | A process for the preparation of pyridine-methylsulfinyl compounds |
EP2022789A1 (en) * | 2007-08-06 | 2009-02-11 | Farmaprojects, S.A. | Process for the preparation of a gastric acid secretion inhibitor |
CN102964336B (en) * | 2012-11-29 | 2014-08-06 | 寿光富康制药有限公司 | Refining method of proton pump inhibitor and reducing method of N-oxide of proton pump inhibitor |
CN103044401A (en) * | 2012-12-21 | 2013-04-17 | 北京华禧联合科技发展有限公司 | Preparation method of benzimidazole compound |
CN103951651B (en) * | 2014-03-24 | 2018-11-30 | 翰宇药业(武汉)有限公司 | The synthetic method of Rabeprazole correlative D |
CN105111187B (en) * | 2015-08-07 | 2017-08-25 | 齐鲁天和惠世制药有限公司 | A kind of preparation method of Pantoprazole Sodium nitrogen oxidation impurity |
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