DK3209819T3 - Genetic encoding of chemical post-translational modification for phage-displayed libraries - Google Patents

Genetic encoding of chemical post-translational modification for phage-displayed libraries Download PDF

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Publication number
DK3209819T3
DK3209819T3 DK15853468.5T DK15853468T DK3209819T3 DK 3209819 T3 DK3209819 T3 DK 3209819T3 DK 15853468 T DK15853468 T DK 15853468T DK 3209819 T3 DK3209819 T3 DK 3209819T3
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Denmark
Prior art keywords
phage
translational modification
chemical post
displayed libraries
genetic encoding
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Application number
DK15853468.5T
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English (en)
Inventor
Ratmir Derda
Pavel Kitov
Simon Ng
Katrina Felicia Tjhung
Vinals Daniel Ferrer
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48Hour Discovery Inc
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Publication of DK3209819T3 publication Critical patent/DK3209819T3/da

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • C12N15/1082Preparation or screening gene libraries by chromosomal integration of polynucleotide sequences, HR-, site-specific-recombination, transposons, viral vectors
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/102Mutagenizing nucleic acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • C12N15/1037Screening libraries presented on the surface of microorganisms, e.g. phage display, E. coli display
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • C12N15/1065Preparation or screening of tagged libraries, e.g. tagged microorganisms by STM-mutagenesis, tagged polynucleotides, gene tags
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B40/00Libraries per se, e.g. arrays, mixtures
    • C40B40/02Libraries contained in or displayed by microorganisms, e.g. bacteria or animal cells; Libraries contained in or displayed by vectors, e.g. plasmids; Libraries containing only microorganisms or vectors
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B40/00Libraries per se, e.g. arrays, mixtures
    • C40B40/04Libraries containing only organic compounds
    • C40B40/06Libraries containing nucleotides or polynucleotides, or derivatives thereof
    • C40B40/08Libraries containing RNA or DNA which encodes proteins, e.g. gene libraries
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B40/00Libraries per se, e.g. arrays, mixtures
    • C40B40/04Libraries containing only organic compounds
    • C40B40/10Libraries containing peptides or polypeptides, or derivatives thereof
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B50/00Methods of creating libraries, e.g. combinatorial synthesis
    • C40B50/06Biochemical methods, e.g. using enzymes or whole viable microorganisms
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2500/00Screening for compounds of potential therapeutic value
    • G01N2500/20Screening for compounds of potential therapeutic value cell-free systems

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Zoology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biomedical Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Wood Science & Technology (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Microbiology (AREA)
  • Biophysics (AREA)
  • Plant Pathology (AREA)
  • Physics & Mathematics (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Virology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Peptides Or Proteins (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
DK15853468.5T 2014-10-22 2015-10-22 Genetic encoding of chemical post-translational modification for phage-displayed libraries DK3209819T3 (da)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201462067183P 2014-10-22 2014-10-22
PCT/CA2015/051077 WO2016061695A1 (en) 2014-10-22 2015-10-22 Genetic encoding of chemical post-translational modification for phage-displayed libraries

Publications (1)

Publication Number Publication Date
DK3209819T3 true DK3209819T3 (da) 2024-05-21

Family

ID=55759999

Family Applications (1)

Application Number Title Priority Date Filing Date
DK15853468.5T DK3209819T3 (da) 2014-10-22 2015-10-22 Genetic encoding of chemical post-translational modification for phage-displayed libraries

Country Status (7)

Country Link
US (1) US10724034B2 (da)
EP (2) EP4350056A3 (da)
JP (1) JP6715831B2 (da)
AU (1) AU2015336857B2 (da)
CA (1) CA2965380A1 (da)
DK (1) DK3209819T3 (da)
WO (1) WO2016061695A1 (da)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR102521152B1 (ko) 2016-11-16 2023-04-13 카탈로그 테크놀로지스, 인크. 핵산-기반 데이터 저장용 시스템
US20190352636A1 (en) * 2017-01-31 2019-11-21 The Governors Of The University Of Alberta Display of molecules on silently genetically encoded nanoscale carriers for determining synergistic molecular interactions
CA3094077A1 (en) * 2018-03-16 2019-09-19 Catalog Technologies, Inc. Chemical methods for nucleic acid-based data storage
KR20210096115A (ko) * 2018-11-28 2021-08-04 더 거버너스 오브 더 유니버시티 오브 알버타 약물작용 발생단이 내재된 유전자-암호화된 거대고리형 펩타이드 라이브러리
CA3143081A1 (en) 2019-06-18 2020-12-24 Eligo Bioscience Bacterial delivery vehicles comprising tracer nucleic acid sequences

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2006304110B2 (en) 2005-10-12 2012-02-02 The Scripps Research Institute Selective posttranslational modification of phage-displayed polypeptides
DK2474613T3 (da) 2008-02-05 2014-10-06 Bicycle Therapeutics Ltd Fremgangsmåder og sammensætninger
UA93922C2 (ru) 2009-03-20 2011-03-25 Михаил Викторович Разуменко Способ получения пептидов, которые специфически распознают клетки определенного типа, и предназначены для терапевтических целей
TWI460620B (zh) 2011-08-24 2014-11-11 Pixart Imaging Inc 人機介面裝置
US20130196867A1 (en) 2011-12-16 2013-08-01 The University Of North Carolina At Chapel Hill Combinatorial post-translationally-modified histone peptides, arrays thereof, and methods of using the same
EP2810069A4 (en) 2012-02-03 2015-08-12 Univ Alberta METHOD FOR THE QUANTIFICATION OF PEPTIDE DERIVATIVE LIBRARIES BY PHAG DISPLAY
US10087485B2 (en) * 2012-06-06 2018-10-02 The Trustees Of Princeton University DNA barcoding of designer mononucleosome and chromatin array libraries for the profiling of chromatin readers, writers, erasers, and modulators thereof

Also Published As

Publication number Publication date
AU2015336857B2 (en) 2020-04-09
EP3209819B1 (en) 2024-02-14
AU2015336857A1 (en) 2017-06-01
EP4350056A2 (en) 2024-04-10
US20170355982A1 (en) 2017-12-14
US10724034B2 (en) 2020-07-28
EP3209819A1 (en) 2017-08-30
EP4350056A3 (en) 2024-06-26
CA2965380A1 (en) 2016-04-28
JP6715831B2 (ja) 2020-07-01
JP2017535260A (ja) 2017-11-30
WO2016061695A1 (en) 2016-04-28
EP3209819A4 (en) 2018-05-16

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