DK175573B1 - Use of an expression cassette leading to biochemical oxidation of steroids, such expression cassettes, - Google Patents
Use of an expression cassette leading to biochemical oxidation of steroids, such expression cassettes, Download PDFInfo
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- DK175573B1 DK175573B1 DK199002648A DK264890A DK175573B1 DK 175573 B1 DK175573 B1 DK 175573B1 DK 199002648 A DK199002648 A DK 199002648A DK 264890 A DK264890 A DK 264890A DK 175573 B1 DK175573 B1 DK 175573B1
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- conversion
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- progesterone
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Abstract
Description
DK 175573 B1 iDK 175573 B1 i
Opfindelsen angår anvendelse af en ekspressionskassette i multigeniske systemer til gennemføring af mangetrinsomdannelser som vist på figur 1 i den ledsagende tegning, hvor ekspressionskassetten kan fungere i 5 en ikke pattedyrs rekombinant vært. Endvidere angår opfindelsen en ekspressionskassette, der kan fungere i en ikke patedyrs rekombinant vært, omfattende en heterolog DNA kodende for et protein, der alene eller i samarbejde med et eller flere yderligere proteiner fungerer ved 10 at katalysere et oxidationstrin i den biologiske reaktionsvej for omdannelse af cholesterol til hydrocorti-son, samt en sådan ekspressionskassette kodende for mindst to proteiner, der alene eller i samarbejde med et eller flere yderligere proteiner fungerer ved at ka-15 talysere mindst to sådanne oxidationstrin. Yderligere angår opfindelsen en rekombinant værtscelle og afkommet deraf omfattende celler af mikroorganismer, planter eller dyr og indeholdende en ekspressionskassette med heterolog DNA og en række fremgangsmåder, nemlig til 20 fremstilling af en blanding af endogene proteiner ved hjælp af en rekombinant celle i et næringsmiddel under sådanne betingelser, at enzymerne kan dannes og akkumuleres i kulturen; til selektiv biokemisk oxidation in vitro omfattende at man inkuberer den forbindelse, der 25 skal oxideres, under tilstedeværelse af et eller flere proteiner under betingelser, der tillader denne oxidation og en akkumulering af den dannede oxiderede forbindelse i dyrkningsvæsken, hvorefter man udvinder den oxiderede forbindelse; og endelig til oxidation af en 30 udvalgt forbindelse omfattende at man dyrker rekombinant celler under tilstedeværelse af den udvalgte forbindelse under betingelser, hvorved den ønskede oxidation sker og den oxiderede forbindelse akkumuleres i 2 DK 175573 B1 dyrkningsvæsken, hvorefter man udvinder den oxiderede forbindelse.The invention relates to the use of an expression cassette in multigenic systems for carrying out multistage conversions as shown in Figure 1 of the accompanying drawing, wherein the expression cassette may function in a non-mammalian recombinant host. Furthermore, the invention relates to an expression cassette which may function in a non-mammalian recombinant host comprising a heterologous DNA encoding a protein that functions alone or in association with one or more additional proteins by catalyzing an oxidation step in the biological reaction pathway to convert hydrocortisone cholesterol, and such an expression cassette encoding at least two proteins that function alone or in association with one or more additional proteins by catalyzing at least two such oxidation steps. Further, the invention relates to a recombinant host cell and its progeny comprising cells of microorganisms, plants or animals and containing an expression cassette of heterologous DNA and a variety of methods, namely to prepare a mixture of endogenous proteins by means of a recombinant cell in a nutrient under such conditions. conditions that the enzymes can be formed and accumulate in the culture; for selective biochemical oxidation in vitro, including incubating the compound to be oxidized, in the presence of one or more proteins under conditions allowing this oxidation and an accumulation of the oxidized compound formed in the culture fluid, after which the oxidized compound is recovered; and finally, to oxidize a selected compound comprising culturing recombinant cells in the presence of the selected compound under conditions whereby the desired oxidation occurs and the oxidized compound accumulates in the culture fluid, after which the oxidized compound is recovered.
11β,17a,21-Trihydroxy-4-pregnen-3,20-dion (hydrocortison) er et vigtigt farmaceutisk steroid, der 5 benyttes på grund af sine farmakologiske egenskaber som et corticosteroid og som en udgangsforbindelse til fremstilling af adskillige nyttige steroider, især andre corticosteroider. Hydrocortison frembringes i binyrebarken hos hvirveldyr og blev oprindelig opnået i 10 små mængder ved hjælp af en omstændelig ekstraktion fra binyrebarkvæv. Man kunne først udvikle nye produktionsveje efter opklaring af strukturen, idet disse bestod af en kombination af trin med kemisk syntese og mikrobielle omdannelser. Den i øjeblikket tilgængelige pro-15 ces giver kun et billigere produkt, fordi udgangsforbindelserne såsom steroler, galdesyrer og sapogeniner er let tilgængelige og billige, men processen er stadig temmelig kompliceret. Man har forsøgt adskillige muligheder for at forbedre de nuværende processer og 20 også forsøgt biokemiske veje.11β, 17a, 21-Trihydroxy-4-pregnen-3,20-dione (hydrocortisone) is an important pharmaceutical steroid which is used because of its pharmacological properties as a corticosteroid and as a starting compound for the preparation of several useful steroids, in particular other corticosteroids. Hydrocortisone is produced in the adrenal cortex of vertebrates and was initially obtained in 10 small amounts by a cumbersome extraction from adrenal cortex tissue. New production paths could only be developed after clarification of the structure, which consisted of a combination of steps of chemical synthesis and microbial transformations. The currently available process only provides a cheaper product because the starting compounds such as sterols, bile acids and sapogenins are readily available and inexpensive, but the process is still rather complicated. Several opportunities have been tried to improve the current processes and 20 also tried biochemical pathways.
Ved et forsøg skulle et passende udgangssteroid omdannes i et in vitro biokemisk system under anvendelse af de isolerede binyrebarkproteiner, der vides at være ansvarlige for den enzymatiske omdannelse in vivo 25 af steroider til hydrocortison. Imidlertid forekom den besværlige isolation af proteinerne og den høje pris for de nødvendige cofaktorer at være prohibitive for en økonomisk tiltrækkende proces i stor skala, ved et andet forsøg skulle man holde de katalyserende proteiner 30 i deres naturlige omgivelser og lade binyrebarkceller-ne producere det ønskede hydrocortison i en cellekultur. Men i praksis forekom det umuligt på grund af den lave produtivitet af cellerne at gøre en sådan biokemisk proces økonomisk tiltrækkende.In one experiment, an appropriate starting steroid was to be converted into an in vitro biochemical system using the isolated adrenal cortex proteins known to be responsible for the in vivo enzymatic conversion of steroids to hydrocortisone. However, the cumbersome isolation of the proteins and the high cost of the necessary cofactors appeared to be prohibitive for a large-scale economically attractive process, in another experiment one had to keep the catalyzing proteins 30 in their natural environment and allow the adrenal cortex cells to produce the desired hydrocortisone in a cell culture. However, in practice, it seemed impossible due to the low produtivity of the cells to make such a biochemical process economically attractive.
DK 175573 B1 3DK 175573 B1 3
In vivo processen i binyrebarken hos pattedyr og andre hvirveldyr udgør en biokemisk omdannelsesvej, der begynder med cholesterol og over forskellige mellemprodukter til slut fører til hydrocortison (se fig. 1).The in vivo process in the adrenal cortex of mammals and other vertebrates represents a biochemical pathway that begins with cholesterol and eventually leads to hydrocortisone over various intermediates (see Figure 1).
5 otte proteiner er direkte involveret i denne omdannelsesvej , idet fem af disse er enzymer, hvoriblandt fire cytochrom P450 enzymer, og de andre tre er elektronoverførende proteiner.Five eight proteins are directly involved in this pathway, five of which are enzymes, including four cytochrome P450 enzymes and the other three are electron transferring proteins.
Det første trin er omdannelsen af cholesterol 10 til 33-hydroxy-5-pregnen-20-on (pregnenolon). Ved denne omdannelse, en monooxygenasereaktion, er tre proteiner involverede; sidekædespaltende enzym (P45QSCC, et hæme-Fe-holdigt protein), adrenodoxin (ADX, et Fe2S2 holdigt protein) og adrenodoxinreduktase (ADR, et FAD-holdigt 15 protein). Reaktionen kræver ud over cholesterol som substrat yderligere molekylært oxygen og NADPH.The first step is the conversion of cholesterol 10 to 33-hydroxy-5-pregnen-20-one (pregnenolone). In this transformation, a monooxygenase reaction, three proteins are involved; side chain cleavage enzyme (P45QSCC, a heme Fe-containing protein), adrenodoxin (ADX, a Fe2S2-containing protein) and adrenodoxin reductase (ADR, a FAD-containing protein). In addition to cholesterol as a substrate, the reaction requires additional molecular oxygen and NADPH.
I det følgende omdannes pregnenolon ved dehy-drogenering/isomerisering til 4-pregnen-3,20-dion (progesteron).In the following, pregnenolone by dehydrogenation / isomerization is converted to 4-pregnen-3,20-dione (progesterone).
20 Denne reaktion, der katalyseres af protein 3β- hydroxysteroid dehydrogenase/isomerase (3p-HSD), kræver pregnenolon og NAD+.This reaction, catalyzed by protein 3β-hydroxysteroid dehydrogenase / isomerase (3β-HSD), requires pregnenolone and NAD +.
Til opnåelse af hydrocortison bliver progesteron derefter hydroxyleret ved tre stillinger, idet disse 25 omdannelser katalyseres af monooxygenaser. Ved omdannelse af progesteron til 17a-hydroxyprogesteron er to proteiner involveret; steroid 17a-hydroxylase (P450l7a^ et hæm-Fe-holdigt protein) og NADPH cytochrom P45q re-duktase (RED, et FAD- og FMN-holdigt protein). Ved 30 reaktionen forbruges progesteron, molekylært oxygen og NADPH.To obtain hydrocortisone, progesterone is then hydroxylated at three positions, these 25 conversions being catalyzed by monooxygenases. When converting progesterone to 17α-hydroxyprogesterone, two proteins are involved; steroid 17a-hydroxylase (P450-17a ^ a heme Fe-containing protein) and NADPH cytochrome P45q reductase (RED, a FAD- and FMN-containing protein). At the reaction, progesterone, molecular oxygen and NADPH are consumed.
Til omdannelsen af 17a-hydroxyprogesteron til 17a,2l-dihydroxy-4-pregnen-3,20-dion (cortexolon) kræ- 4 DK 175573 B1 ves også to proteiner: steroid-2l-hydroxylase (P450C2i, et hæm-Fe-holdigt protein) og det ovennævnte protein RED. Ved reaktionen forbruges 17a-hydroxyprogesteron, molekylært oxygen og NADPH.For the conversion of 17α-hydroxyprogesterone to 17α, 2β-dihydroxy-4-pregnen-3,20-dione (cortexolone), two proteins are also required: steroid-2β-hydroxylase (P450C2i, a heme-Fe containing protein) and the above protein RED. In the reaction, 17α-hydroxyprogesterone, molecular oxygen and NADPH are consumed.
5 Ved omdannelsen af cortexolon til hydrocortison er tre proteiner involverede: steroid Ιΐβ-hydroxylase (Ρ45011β, et hæm-Fe-holdigt protein) og de ovenfor nævnte proteiner ADX og ADR.5 In the conversion of cortexolone to hydrocortisone, three proteins are involved: steroid Ιΐβ-hydroxylase (Ρ45011β, a heme-Fe-containing protein) and the aforementioned proteins ADX and ADR.
Som ovenfor beskrevet er cytochrom P45Q protei-10 ner enzymer, der er essentielle for den biokemiske omdannelse af cholesterol til hydrocortison. Disse enzymer hører til en større gruppe af cytochrom P450 proteiner (eller kort P450 proteiner). Man har fundet disse i prokaryoter (forskellige bakterier) og eukaryoter 15 (gærarter, skimmelsvampe, planter og dyr). Hos pattedyr findes et højt niveau af P450 proteiner i binyrebark, æggestokke, testikler og lever.As described above, cytochrome P45Q proteins are enzymes essential for the biochemical conversion of cholesterol to hydrocortisone. These enzymes belong to a larger group of cytochrome P450 proteins (or short P450 proteins). These have been found in prokaryotes (various bacteria) and eukaryotes 15 (yeasts, molds, plants and animals). In mammals, a high level of P450 proteins is found in adrenal cortex, ovaries, testes and liver.
Mange af disse proteiner er nu blevet oprenset og er godt karakteriserede, og man har bestemt deres 20 specifikke aktivitet. I de senere år er et antal oversigtsartikler herom blevet offentliggjort, såsom K. Ruckpaul og H. Rein (eds), "Cytochrome P450" og P.R.Many of these proteins have now been purified and well characterized, and their specific activity has been determined. In recent years, a number of review articles on this have been published, such as K. Ruckpaul and H. Rein (eds), "Cytochrome P450" and P.R.
Ortiz de Montellano (ed.) "Cytochrome P45q structure, mechanism and biochemistry". Cytochrom P45Q proteiner 25 er ejendommelige ved deres specifikke absorbansmaksi-mum ved 450 nm efter reduktion med carbonmonoxid. I prokaryotiske organismer er P450 proteinerne enten bundet til membraner eller er cytoplasmatiske. Såvidt man har detaljerede studier over bakterielle Ρ450 proteiner 30 (f.eks. P450meg og P450cam), har man vist, at et ferre-doxin og en ferredoxinreduktase er involveret i den hydroxylerende aktivitet. Hvad angår eukaryotiske organismer findes to typer af P450 proteiner I og II beskrevet. De to forskelle mellem disse er: 5 DK 175573 B1 1. Hvad angår subcellulær lokalisering er type I lokaliseret i den mikrosomale fraktion, og type II er lokaliseret i den indre membran af mitochondria; 2. Hvad angår den måde, hvor elektroner overfø-5 res til Ρ450 proteinet, vil type I blive reduceret af NADPH via en P450 reduktase, hvorimod type II reduceres af NADPH via en ferredoxinreduktase (f.eks. adreno-doxinreduktase) og et ferredoxin (f.eks. adrenodoxin).Ortiz de Montellano (ed.) "Cytochrome P45q structure, mechanism and biochemistry". Cytochrome P45Q proteins 25 are characterized by their specific absorbance maxima at 450 nm after reduction with carbon monoxide. In prokaryotic organisms, the P450 proteins are either bound to membranes or are cytoplasmic. As far as detailed studies of bacterial Ρ450 proteins 30 (e.g., P450meg and P450cam) have been shown, a ferredoxin and a ferredoxin reductase have been implicated in the hydroxylating activity. Regarding eukaryotic organisms, two types of P450 proteins I and II are described. The two differences between these are: 1 In the case of subcellular localization, type I is located in the microsomal fraction and type II is located in the inner membrane of mitochondria; 2. As to the way in which electrons are transferred to the 50450 protein, type I will be reduced by NADPH via a P450 reductase, whereas type II will be reduced by NADPH via a ferredoxin reductase (e.g., adrenodoxin reductase) and a ferredoxin. (e.g., adrenodoxin).
Ifølge EP-A-0281245 kan man fremstille cytochrom 10 P450 enzymer fra Streptomyces specier og benytte disse til hydroxylering af kemiske forbindelser.According to EP-A-0281245, cytochrome 10 P450 enzymes from Streptomyces species can be prepared and used for hydroxylation of chemical compounds.
Enzymerne benyttes på isoleret form, hvilket er en temmelig omstændelig og kostbar procedure.The enzymes are used in isolated form, which is a rather complicated and expensive procedure.
JP-A-62236485 (Derwent 87-331234) belærer os om, 15 at det er muligt at indføre gener fra lever cytochrom P450 enzymer i Saccharomyces cerevisiae og at eksprime-re disse til opnåelse af enzymer, der kan benyttes med henblik på deres oxiderende aktivitet.JP-A-62236485 (Derwent 87-331234) teaches us that it is possible to introduce genes from liver cytochrome P450 enzymes into Saccharomyces cerevisiae and to express them to obtain enzymes that can be used for their oxidizing activity.
Imidlertid er der i ovenstående referencer ingen 20 henvisning til anvendelse af cytochrom P450 enzymer til fremstilling af steroidforbindelser.However, in the above references there is no reference to the use of cytochrome P450 enzymes for the preparation of steroid compounds.
Opfindelsen tilvejebringer en lang række ekspressionskassetter til produktion af proteiner, der er nødvendige ved konstruktionen af et multigent system 25 til omdannelse i ét trin af billige steroidudgangsmaterialer til sjældnere og kostbarere slutprodukter, idet en sådan omdannelse udføres i native systemer ved en række enzymkatalyserede og cofaktormedierede omdannelser, såsom produktionen af hydrocortison fra 30 cholesterol. Ekspressionskassetterne ifølge opfindelsen er nyttige i den sluttelige produktion af multigene systemer til udførelse af disse mangetrinsomdannelser.The invention provides a wide variety of expression cassettes for the production of proteins necessary for the construction of a multigene system for one step conversion of cheap steroid starting materials into rarer and more expensive end products, such conversion being performed in native systems by a variety of enzyme catalyzed and cofactor mediated conversions. , such as the production of hydrocortisone from 30 cholesterol. The expression cassettes of the invention are useful in the final production of multigene systems for performing these multistage conversions.
I overensstemmelse hermed er den ovenfor definerede anvendelse af en ekspressionskassette ejendommelig 6 DK 175573 B1 ved, at ekspressionskassetten omfatter en heterolog DNA kodende sekvens, der koder for et protein, idet dette alene eller i samarbejde med et eller flere yderligere proteiner fungerer ved at katalysere et oxidationstrin 5 i den biologiske omdannelsesvej fra cholesterol til hy-drocortison, hvor dette trin er udvalgt blandt omdannelsen af cholesterol til pregnelonon; omdannelse af pregnenolon til progesteron; omdannelse af progesteron til 17«<-hydroxyprogesteron; omdannelse af 17o(-hydroxy-10 progesteron til cortexolon; og omdannelse af cortexolon til hydroxycortison; samt de i værten effektive kontrolsekvenser. Ekspressionskassetterne ifølge opfindelsen omfattende DNA kodende for henholdsvis et eller mindst to proteiner, der katalyserer et eller mindst to 15 oxidationstrin er begge ejendommelig ved, at dette/dis-se oxidationstrin er valgt fra omdannelsen af cholesterol til pregnelonon; omdannelse af pregnenolon til progesteron; omdannelse af progesteron til 17©c-hydroxy-progesteron; omdannelse af 17c* -hydroxyprogesteron 20 til cortexolon; og omdannelse til cortexolon til hydroxycortison; samt ved de i værten effektive kontrolsekvenser. Den rekombinante værtscelle eller afkommet deraf ifølge opfindelsen er ejendommelig ved, at ekspressionskassetten er en sådan ifølge opfindelsen; og 25 endelig er de tre nævnte fremgangsmåder Ifølge opfindelsen ved første og tredje fremgangsmåde ejendommelige ved, at de udnytter en rekombinant værtscelle ifølge opfindelsen, og i andet tilfælde ved udnyttelse af et protein fremstillet ved den førstnævnte fremgangsmåde.Accordingly, the above-defined use of an expression cassette is peculiar in that the expression cassette comprises a heterologous DNA coding sequence encoding a protein, acting alone or in cooperation with one or more additional proteins by catalyzing an oxidation step 5 of the biological conversion pathway from cholesterol to hydrocortisone, where this step is selected from the conversion of cholesterol to pregnelonone; conversion of pregnenolone to progesterone; conversion of progesterone to 17 '<- hydroxyprogesterone; conversion of 17o (-hydroxy-10 progesterone to cortexolone; and conversion of cortexolone to hydroxycortisone; and the host effective control sequences. The expression cassettes of the invention comprising DNA or at least two proteins catalyzing one or at least two oxidation steps, respectively, are peculiar in that this / this oxidation step is selected from the conversion of cholesterol to pregnelonone; conversion of pregnenolone to progesterone; conversion of progesterone to 17? c-hydroxy-progesterone; conversion of 17c * -hydroxyprogesterone 20 to cortexolone; and conversion to The recombinant host cell or progeny thereof according to the invention is characterized in that the expression cassette is one according to the invention, and finally the three mentioned methods according to the invention are characterized by the first and third methods. that they utilize a recombinant weather cell in accordance with the invention, and in other cases by utilizing a protein prepared by the former method.
30 7 DK 175573 B130 7 DK 175573 B1
KORT BESKRIVELSE AF TEGNINGENBRIEF DESCRIPTION OF THE DRAWING
På alle figurer benyttes følgende forkortelser: R-L, EcoRI; H, Hindlll; Sc, Seal; P, PstI; K, Kpnl; St, 5 Stul; Sp, SphI; X, Xbal; N, Ndel; S, Smal; Ss, SstI;The following abbreviations are used in all figures: R-L, EcoRI; H, HindIII; Sc, Seal; P, PstI; K, Kpnl; St, 5 Chair; Sp, SphI; X, Xba; N, Ndel; S, Narrow; Ss, SstI;
Ry, EcoRV; S-j-, SacI; B, BamHI; Sjj, SacII; Sal, Sall;Ry, EcoRV; S-j-, SacI; B, Bam HI; Sj, SacII; Sal, Sall;
Xh, Xhol; Pv, PvuII; Bg, Bglll og M, Mlul.Xh, Xhol; Pv, PvuII; Bg, Bglll and M, Mlul.
Figur 1 viser en skematisk oversigt over de proteiner, der er involveret i trinnene i rækkefølge under 10 omdannelsen af cholesterol til hydrocortison som den forekommer i binyrebarken hos pattedyr.Figure 1 shows a schematic overview of the proteins involved in the steps in succession during the conversion of cholesterol to hydrocortisone as it occurs in the adrenal cortex of mammals.
Figur 2 viser konstruktionen af plasmid pGBSCC-1. P450SCC-sekvenserne ses i en firkant ()·Figure 2 shows the construction of plasmid pGBSCC-1. The P450SCC sequences are seen in a square () ·
Figur 3 viser indsættelsen af et syntetisk af-15 ledt Pstl/Hindlll fragment indeholdende S'-P^qSCC-sekvenserne i plasmidet pTZl8R til opnåelse af plasmi-det pTZ synlead.Figure 3 shows the insertion of a synthetically derived PstI / HindIII fragment containing the S'-P1qSCC sequences into the plasmid pTZ18R to obtain the plasmid pTZ synlead.
Figur 4 viser konstruktionen af et p450SCCcDNA i fuld længde af syntetiske (1,..-,..-1 ) og ved cDNA kloning 20 ( W//Å ) opnåede P450SCC-sekvenser i pTZ18R til opnåelse af pGBSCC-2.Figure 4 shows the construction of a full-length p450SCCcDNA of synthetic (1, ..-, ..-1) and cDNA cloning 20 (W // Å) obtained P450SCC sequences in pTZ18R to obtain pGBSCC-2.
Figur 5 viser den fuldstændige nucleotidsekvens af plasmidet pBHA-i.Figure 5 shows the complete nucleotide sequence of the plasmid pBHA-i.
Figur 6 er en skematisk repræsentation af kon-25 struktionen af pGBSCC-3. P450SCCcDNA sekvenser fra plasmid pGBSCC-2 blev Indført i Baclllus/E. coll overfø-ringsplasmidet pBHA-1. Udfyldte firkanter er som forklaret på figur 4.Figure 6 is a schematic representation of the construction of pGBSCC-3. P450SCCcDNA sequences from plasmid pGBSCC-2 were introduced into Baclllus / E. coll., the transfer plasmid pBHA-1. Filled squares are as explained in Figure 4.
Figur 7 viser indførelsen af et Ndel restrikti-onssted i kombination med et ATG starteodon før P45oSCC-modningsstedet i pGBSCC-3 til opnåelse af pGBSCC-4.Figure 7 shows the introduction of an Nde I restriction site in combination with an ATG startodon before the P45oSCC maturation site in pGBSCC-3 to obtain pGBSCC-4.
8 DK 175573 B18 DK 175573 B1
Figur 8 viser en fysisk afbildning af pGBSCC-5, der er opnået ved fjernelse af E. coll sekvenser fra plasmid pGBSCC-4.Figure 8 shows a physical view of pGBSCC-5 obtained by removing E.coll sequences from plasmid pGBSCC-4.
Figur 9 viser et Western blot analyseret med an-5 tistoffer mod p4cjqSCC, der demonstrerer P450SCC ekspressionen af plasmid pGBSCC-5 indført i B♦ subtllls (bane c) og B. lichenlformis (bane f). Kontrolekstrakter fra B. subtilis og B. lichenlformis ses endvidere henholdsvis i bane a og d. Af sammenligningsgrunde sat-1° te man også 30 ng renset P450SCC fra binyrebark til disse kontrolekstrakter (henholdsvis bane b og bane e).Figure 9 shows a Western blot analyzed with antibodies to p4cjqSCC demonstrating the P450SCC expression of plasmid pGBSCC-5 introduced into B ♦ subtllls (lane c) and B. lichenlformis (lane f). Control extracts from B. subtilis and B. lichenlformis are also seen in lanes a and d, respectively. For comparative reasons, 30 ng of purified P450SCC from adrenal bark was also added to these control extracts (lane b and lane e, respectively).
Figur 10 er en skematisk repræsentation af konstruktionen af pGBSCC-17. De kodende P45qSCC-DNA sekvenser fra plasmid pGBSCC-4 blev indført i E. coll 15 ekspressionsvektoren pTZlBRN. P450SCC-sekvenserne ses i en firkant {&77Z\ ) ·Figure 10 is a schematic representation of the construction of pGBSCC-17. The coding P45qSCC DNA sequences from plasmid pGBSCC-4 were introduced into the E.coll 15 expression vector pTZ1BRN. The P450SCC sequences are seen in a square {& 77Z \) ·
Figur 11 viser P450SCC ekspressionen af pGBSCC-17 i E. coil JM101.Figure 11 shows the P450SCC expression of pGBSCC-17 in E. coil JM101.
(a) SDS/PAGE og Coomassie brilliantblå farvning 20 af celleproteinfraktionerne (20μ1) fremstillet fra E. coll kontrolstammen (bane 3) og E. coll transformanter SCC-301 og 302 (henholdsvis bane 1 og bane 2). Der vises til sammenligning 400 ng renset bovin P45QSCC (hane 4).(a) SDS / PAGE and Coomassie brilliant blue staining 20 of the cell protein fractions (20μ1) prepared from the E. coll control strain (lane 3) and E. coll transformants SCC-301 and 302 (lane 1 and lane 2, respectively). By comparison, 400 ng of purified bovine P45QSCC (male 4) is shown.
25 (b) Western blot analyse analyseret med anti stoffer mod P450SCC fra celleproteinfraktioner (5μ1) fremstillet af kontrolstammen E. coli JM101 (bane 2) og af E. coll transformanterne SCC-301 (bane 3} og SCC-302 (bane 4). Der vises 100 ng renset bovin P450SCC (bane 30 i) til sammenligning.(B) Western blot analysis analyzed with anti-P450SCC antibodies from cell protein fractions (5μ1) prepared by the control strain E. coli JM101 (lane 2) and by the E. coll transformants SCC-301 (lane 3} and SCC-302 (lane 4) 100 ng of purified bovine P450SCC (lane 30 i) are shown for comparison.
Figur 12 viser konstruktionen af plasmid PUCG418.Figure 12 shows the construction of plasmid PUCG418.
Figur 13 viser konstruktionen af gærekspressionsvektoren pGB950 ved indsættelse af promoteren og 9 DK 175573 B1 terminatoren med multiple kloningssteder ( pgjW, ) fra lactase i puCG418. Til afledning af pGBSCC-6 indsætter man et syntetisk Sall/Xhol fragment indeholdende et ATG startkodon og kodonerne for de første 8 aminosyrer af 5 P450SCC 1 PGB950 *Figure 13 shows the construction of the yeast expression vector pGB950 by inserting the promoter and the multiple cloning site (pgjW) terminator from lactase into puCG418. To derive pGBSCC-6, a synthetic Sall / Xhol fragment containing an ATG start codon and the codons for the first 8 amino acids of 5 P450SCC 1 PGB950 * are inserted
Figur 14 er en skematisk repræsentation, der viser konstruktionen af gær P450SCC-ekspressionskassetten pGBSCC-7.Figure 14 is a schematic representation showing the construction of the yeast P450SCC expression cassette pGBSCC-7.
Figur 15 viser et Western blot analyseret med antistoffer, der er specifikke for proteinet P^qSCC.Figure 15 shows a Western blot assayed with antibodies specific for the protein β qSCC.
Blot A indeholder ekstrakter afledt af Saccharo-myces cerevlsiae 273-10B transformeret med pGBSCC-10 (bane l); fra S. cerevislae 273-10B som kontrol (bane 2); fra Kluyveromyces lactls CBS 2360 transformeret med 15 pGBSCC-7 (bane 3) og fra K. lactls CBS 2360 som kontrol (bane 4).Blot A contains extracts derived from Saccharomyces cerevlsiae 273-10B transformed with pGBSCC-10 (lane 1); from S. cerevislae 273-10B as control (lane 2); from Kluyveromyces lactls CBS 2360 transformed with 15 pGBSCC-7 (lane 3) and from K. lactls CBS 2360 as control (lane 4).
Blot B indeholder ekstrakter afledt af K. lactls CBS 2360 som kontrol (bane 1) og K♦ lactls CBS 2360 transformeret med pGBSCC-15 (bane 2), med pGBSCC-12 20 (bane 3) eller med pGBSCC-7 (bane 4).Blot B contains extracts derived from K. lactls CBS 2360 as control (lane 1) and K ♦ lactls CBS 2360 transformed with pGBSCC-15 (lane 2), with pGBSCC-12 20 (lane 3) or with pGBSCC-7 (lane 4) ).
Blot C indeholder ekstrakter afledt af S. cerevislae 273-10B som kontrol (bane 1), transformeret med pGBSCC-16 (bane 2) eller med pGBSCC-13 (bane 3).Blot C contains extracts derived from S. cerevislae 273-10B as control (lane 1), transformed with pGBSCC-16 (lane 2) or with pGBSCC-13 (lane 3).
Figur 16 er en skematisk repræsentation af kon-2·* struktionen af gærekspressionsvektoren pGBSCC-9 indeholdende den isocytochrome Cl (cyc-1) promoter fra S. cerevislae.Figure 16 is a schematic representation of the construction of the yeast expression vector pGBSCC-9 containing the isocytochrome Cl (cyc-1) promoter of S. cerevislae.
Figur 17 viser et konstruktionsdiagram for den P450SCCcDNA indeholdende ekspressionsvektor pGBSCC-10 til S. cerevislae.Figure 17 shows a construction diagram of the P450SCCcDNA containing expression vector pGBSCC-10 to S. cerevislae.
Figur 18 viser konstruktionen af P450SCC ekspressionsvektoren pGBSCC-12, hvori et syntetisk afledt DNA-fragment, der koder for præ-P450SCC sekvensen, 10 DK 175573 B1 (Jggggg ) er indsat 5' -stillet for den kodende sekvens for moden P450SCC-Figure 18 shows the construction of the P450SCC expression vector pGBSCC-12, in which a synthetically derived DNA fragment encoding the pre-P450SCC sequence, is inserted 5 'positioned for the mature P450SCC coding sequence.
Figur 19 viser konstruktionen af pGBSCC-13. Den-ne P4cjqSCC ekspressionskassette for S. cerevlsiae inde-5 holder præ-P45øSCCcDNA sekvensen anbragt 3'-stillet for cyc-1 promotoren fra S. cerevisiae.Figure 19 shows the construction of pGBSCC-13. This P4cjqSCC expression cassette for S. cerevlsiae contains the pre-P45cSCCcDNA sequence located at the 3 'position of the cyc-1 promoter from S. cerevisiae.
Figur 20 viser en skematisk repræsentation af konstruktionen af plasmiderne pGBSCC-14 og pGBSCC-15.Figure 20 shows a schematic representation of the construction of plasmids pGBSCC-14 and pGBSCC-15.
Den sidstnævnte indeholder den P45QSCC kodende sekvens 10 i ramme med cytochromoxidase VI præsekvensen ).The latter contains the P45QSCC coding sequence 10 in the frame with the cytochrome oxidase VI precursor).
Figur 21 viser konstruktionen af plasmidet pGBSCC-16. I dette plasmid er cytochromoxidase VI præsekvensen (VÆ/Ά ) fra S. cerevisiae sammenføjet med den kodende P45qSCC sekvens anbragt 3'-stillet i forhold 15 til cyc-1 promotoren.Figure 21 shows the construction of the plasmid pGBSCC-16. In this plasmid, the cytochrome oxidase VI precursor (VΔ / Ά) of S. cerevisiae joined to the coding P45qSCC sequence is positioned 3 'relative to the cyc-1 promoter.
Figur 22 viser fysiske afbildninger af plasmiderne pGB17a-l (A) og pGB17a-2 (B) indeholdende henholdsvis det 3'-stillede 1,4 kb fragment og det 5'-stillede 345 bp fragment (Eggsg ) fra P45q17cicDNA. I 20 pGB17a-3 (C), der indeholder P45017acDNA sekvensen i fuld længde, er positionen af ATG startkodonet angivet.Figure 22 shows physical mappings of the plasmids pGB17a-1 (A) and pGB17a-2 (B) containing the 3 'positioned 1.4 kb fragment and the 5' positioned 345 bp fragment (Eggsg) of P45q17cicDNA, respectively. In the 20 pGB17a-3 (C) containing the full-length P45017acDNA sequence, the position of the ATG start codon is indicated.
Figur 23 viser mutationen af pGB17a-3 ved in vitro mutagenese. Det herved opnåede plasmid pGBl7a-4 indeholder et Sall restriktionssted fulgt af optimale 25 gærtranslationssignaler netop opstrøms for ATG initie-ringskodonet.Figure 23 shows the mutation of pGB17a-3 by in vitro mutagenesis. The resulting plasmid pGB177-4 contains a SalI restriction site followed by optimal 25 yeast translation signals just upstream of the ATG initiation codon.
Figur 24 er en skematisk oversigt over konstruktionen af gær Ρ45ο17α ekspressionskassetten pGBl7a-5.Figure 24 is a schematic overview of the construction of the yeast Ρ45ο17α expression cassette pGBl7a-5.
Figur 25 viser mutationen af pGB17a-3 ved in vi-tro mutagenese. Det herved opnåede plasmid pGB17a-6 indeholder et Ndel restriktionssted ved ATG-initierings-kodonet.Figure 25 shows the mutation of pGB17a-3 by in vitro mutagenesis. The resulting plasmid pGB17a-6 contains an NdeI restriction site at the ATG initiation codon.
Figur 26 er en skematisk repræsentation af konstruktionen af pGB17a-7. P45Q17acDNA sekvenser fra 11 DK 175573 B1 plasmid pGB17a-6 blev indført i Bacillus/E. coli over-føringsplasmidet pBHA-1.Figure 26 is a schematic representation of the construction of pGB17a-7. P45Q17acDNA sequences from 11 DK 175573 B1 plasmid pGB17a-6 were introduced into Bacillus / E. coli transfer plasmid pBHA-1.
Figur 27 viser en fysisk afbildning af pGBl7a-8, der er opnået ved fjernelse af E. coli sekvenser fra 5 plasmidet pGB17a-7.Figure 27 shows a physical representation of pGB17a-8 obtained by removing E. coli sequences from the plasmid pGB17a-7.
Figur 28 viser fysiske afbildninger af pGBC2l-l og 2, der henholdsvis indeholder et 1,53 Kb 3'-P450C21cDNA og et 540 bp 5'-P450C21cDNA EcoRI fragment i EcoRI-stedet på kloningsvektoren pTZ18R.Figure 28 shows physical mappings of pGBC2-1 and 2 containing a 1.53 Kb 3'-P450C21cDNA and a 540 bp 5'-P450C21cDNA EcoRI fragment, respectively, in the EcoRI site of the cloning vector pTZ18R.
10 Figur 29 viser in vitro mutagenese ved polymera- sekædereaktion (PCR) af pGBC21-2 til indførelse af EcoRV og Ndel restriktionssteder opstrøms for P45qC21 ATG-initieringskodonet fulgt af molekylær kloning i kloningsvektoren pSP73 til opnåelse af pGBC2l-3.Figure 29 shows in vitro mutagenesis by polymerase chain reaction (PCR) of pGBC21-2 to introduce EcoRV and Ndel restriction sites upstream of the P45qC21 ATG initiation codon followed by molecular cloning in the cloning vector pSP73 to obtain pGBC2-1-3.
15 Figur 30 er en skematisk oversigt over konstruk tionen af pGBC21-4, der indeholder P4gQC2lcDNA sekvensen i fuld længde.Figure 30 is a schematic overview of the construction of pGBC21-4 containing the full-length P4gQC2lcDNA sequence.
Figur 31 er en skematisk repræsentation af kon-20 struktionen af pGBC21-5. P450C21cdna sekvensen fra plasmidet pGBC21-4 blev indført i Bacillus/E. coli overføringsplasmidet pBHA-1.Figure 31 is a schematic representation of the construction of pGBC21-5. The p450C21cdna sequence from plasmid pGBC21-4 was introduced into Bacillus / E. coli transfer plasmid pBHA-1.
Figur 32 viser en fysisk afbildning af pGBC21-6, der er opnået ved fjernelse af E. coli sekvenser fra 25 plasmidet pGBC2l-5.Figure 32 shows a physical depiction of pGBC21-6 obtained by removing E. coli sequences from the plasmid pGBC2-1-5.
Figur 33 viser mutationen af pGBC21-2 ved in vitro mutagenese. Det opnåede plasmid pGBC21-7 indeholder et Sall restriktionssted fulgt af optimale gærtranslationssignaler netop opstrøms for ATG initieringskodo-30 net.Figure 33 shows the mutation of pGBC21-2 by in vitro mutagenesis. The resulting plasmid pGBC21-7 contains a SalI restriction site followed by optimal yeast translation signals just upstream of the ATG initiation codon.
Figur 34 repræsenterer konstruktionen af pGBC21-8, der indeholder P45qC21cDNA i fuld længde med modificerede flankerende restriktionssteder, der er egnede til kloning i gærekspressionsvektoren.Figure 34 represents the construct of pGBC21-8 containing full-length P45qC21cDNA with modified flanking restriction sites suitable for cloning in the yeast expression vector.
12 DK 175573 B112 DK 175573 B1
Figur 35 er en skematisk repræsentation, der viser konstruktion af gær P450C21-ekspressionskassetten pGBC21-9.Figure 35 is a schematic representation showing construction of the yeast P450C21 expression cassette pGBC21-9.
Figur 36 viser in vitro mutagenese ved polymera-5 sekædereaktion af pGBlip-l til indførelse af passende flankerende restriktionssteder og et ATG initieringskodon på P45QllpcDNA sekvensen i fuld længde fulgt af molekylær kloning i Bacillus/E. coll overføringsvektoren pBHA-1 til opnåelse af plasmidet pGB113-2.Figure 36 shows in vitro mutagenesis by polymerase-5 chain reaction of pGBlip-1 to introduce appropriate flanking restriction sites and an ATG initiation codon on the full-length P45Q11pcDNA sequence followed by molecular cloning in Bacillus / E. coll transfer vector pBHA-1 to obtain the plasmid pGB113-2.
10 Figur 37 viser in vitro mutagenese ved polymera- sekædereaktion af pGBlip-l til indførelse af passende flankerende restriktionssteder og et ATG initieringskodon på p45q11£cDNA sekvensen i fuld længde, fulgt af molekylær kloning i gærekspressionsvektoren pGB950 til 15 opnåelse af plasmidet pGBllp-4.Figure 37 shows in vitro mutagenesis by polymerase chain reaction of pGBlip-1 to introduce appropriate flanking restriction sites and an ATG initiation codon on the full-length p45q11 £ cDNA sequence, followed by molecular cloning in the yeast expression vector pGB950 to obtain plasmid pGBllp-4.
Figur 38 er en skematisk oversigt over den mole-kulære kloning af ADXcDNA sekvensen fra en bovin binyrebark polyA+RNA/cDNA blanding ved polymerasekædereak-tionen. Man indsatte cDNA sekvensen, der koder for det 20 modne ADX protein, i passende steder på gærekspressionsvektoren pGB95Q til opnåelse af plasmidet pGBADX-l.Figure 38 is a schematic overview of the molecular cloning of the ADXcDNA sequence from a bovine adrenal cortex polyA + RNA / cDNA mixture by the polymerase chain reaction. The cDNA sequence encoding the mature ADX protein was inserted into appropriate sites on the yeast expression vector pGB95Q to obtain the plasmid pGBADX-1.
Figur 39 viser et Western blot analyseret med antistoffer mod ADX og demonstrerer ADX ekspressionen af plasmid pGBADX-l i K. lactls CBS 2360 transfor'manter ADX-101 og 102 (henholdsvis banerne 4 og 5). Ekstrakter af kontrolstammen K. lactis CBS 2360 ses i bane 3. Af sammenligningsgrunde er der også sat 100 ng renset binyrebarks ADX til gelen i bane i.Figure 39 shows a Western blot analyzed with antibodies to ADX and demonstrates the ADX expression of plasmid pGBADX-1 in K. lactl's CBS 2360 transformants ADX-101 and 102 (lanes 4 and 5, respectively). Extracts of the control strain K. lactis CBS 2360 are seen in lane 3. For comparison reasons, 100 ng of purified adrenal cortex ADX has also been added to the gel in lane.
00 Figur 40 viser in vitro mutagenese ved polymera- sekædereaktion af pGBADR-1 til indførelse af passende flankerende restriktionssteder og et ATG-initieringskodon på ADRcDNA sekvensen i fuld længde fulgt af mole- 13 DK 175573 B1 kylær kloning i gærekspressionsvektoren pGB950 til opnåelse af pGBADR-2.00 Figure 40 shows in vitro mutagenesis by polymerase chain reaction of pGBADR-1 to introduce appropriate flanking restriction sites and an ATG initiation codon on the full-length ADRcDNA sequence followed by molecular cloning in the yeast expression vector pGB950 to obtain pGBADR 2nd
Opfindelsen omfatter fremstilling og dyrkning af celler, der er egnede til anvendelse i biokemiske 5 produktionsreaktorer i stor skala og anvendelse af disse celler til oxidation af forbindelser og især til produktion af steroider som vist i fig. 1. Hver af de afbildede reaktioner kan udføres separat, og ombytning af trinnene i en mangetrinsreaktion er inkluderet.The invention comprises the preparation and cultivation of cells suitable for use in large-scale biochemical production reactors and the use of these cells for the oxidation of compounds and in particular for the production of steroids as shown in FIG. 1. Each of the depicted reactions can be carried out separately and the substitution of the steps of a multistage reaction is included.
10 Mikroorganismer er foretrukne værter, men man kan ligeså godt benytte andre celler såsom celler fra planter eller dyr, eventuelt i en cellekultur eller i vævet hos levende transgene planter eller dyr.Microorganisms are preferred hosts, but other cells such as cells from plants or animals may also be used, optionally in a cell culture or in the tissue of living transgenic plants or animals.
Cellerne ifølge opfindelsen opnås ved genetisk 15 transformation af egnede receptorceller, foretrukket celler af egnede mikroorganismer, med vektorer indeholdende DNA-sekvenser, der koder for proteiner involveret i omdannelsen af cholesterol til hydrocortison, omfattende sidekædespaltende enzym (P450SCC), adrenodoxin 20 (ADX), adrenodoxinreduktase (ADR), 3p-hydroxysteroid dehydrogenase/isomerase (3P-HSD), steroid-17a-hydroxy-lase (P45017a), NADPH cytochrom P450 reduktase (RED), steroid-21-hydroxylase (P45qC21) og steroid-lip-hydro-xylase (Ρ45011β). Visse værtsceller kan eventuelt alle-25 rede selv producere et eller flere af de nødvendige proteiner i et tilstrækkeligt niveau og skal derfor kun transformeres med supplementerende DNA-sekvenser. Sådanne mulige egne proteiner er ferredoxin, ferredoxin-reduktase, P45g reduktase og 3p-hydroxysteroid dehydro-30 genase/isomerase.The cells of the invention are obtained by genetic transformation of suitable receptor cells, preferably cells of suitable microorganisms, with vectors containing DNA sequences encoding proteins involved in the conversion of cholesterol to hydrocortisone, comprising side chain cleavage enzyme (P450SCC), adrenodoxin 20 (ADX), adrenodoxin reductase (ADR), 3β-hydroxysteroid dehydrogenase / isomerase (3β-HSD), steroid-17α-hydroxyase (P45017a), NADPH cytochrome P450 reductase (RED), steroid-21-hydroxylase (P45qC21), and steroid-lip-hydro -xylase (Ρ45011β). Certain host cells may already be able to produce one or more of the necessary proteins themselves at a sufficient level and must therefore only be transformed with supplemental DNA sequences. Such possible own proteins are ferredoxin, ferredoxin reductase, P45g reductase and 3β-hydroxysteroid dehydrogenase / isomerase.
Til udvindelse af sekvenser, der koder for proteiner, der er involveret i omdannelsen af cholesterol til hydrocortison, har man udvalgt passende DNA-kilder.For the extraction of sequences encoding proteins involved in the conversion of cholesterol to hydrocortisone, appropriate DNA sources have been selected.
14 DK 175573 B114 DK 175573 B1
En egnet kilde til udvindelse af DNA, der koder for alle proteiner, der er involveret i omdannelsen af cholesterol til hydrocortison, er binyrebarkvæv fra hvirveldyr f.eks. bovint binyrebarkvæv. Man kan også udvin-5 de relevant DNA fra forskellige mikroorganer, f.eks. fra Pseudomonas testosteron!, Streptomyces qriseocar-neus eller Brevlbacterium sterollcum for DNA, der koder for 3β-Ι^Γθχγε1βΓθ1ά dehydrogenase/isomerase, og fra Curvularia lunata eller Cunninghatnella blakesleeana 10 for DNA, der koder for proteiner involveret i Ιΐβ-hy-droxylering af cortexolon. DNA-sekvenser, der koder for proteinerne bovin P450SCC, bovin P45qH3 eller et mikrobielt ækvivalent protein, bovin adrenodoxin, bovin adenotoxinreeduktase, 33-hydroxysteroid dehydrogenase/ 15 isomerase af bovin eller mikrobiel oprindelse, bovin Ρ45θ17α, bovin P450C21 og NADPH cytochrom P45Q reduk-tase af bovin eller mikrobiel oprindelse blev isoleret ved følgende trin: 1 2 3 4 5 6 7 8 9 10 11 1. Eukaryotlske sekvenser (cDNA * er) 2 a. Man fremstillede total RNA fra passende væv.A suitable source of DNA extraction encoding all proteins involved in the conversion of cholesterol to hydrocortisone is vertebrate adrenal tissue, e.g. bovine adrenal tissue. It is also possible to recover relevant DNA from various microorganisms, e.g. from Pseudomonas testosterone !, Streptomyces qriseocar-neus or Brevlbacterium sterollcum for DNA encoding 3β-Ι ^ Γθχγε1βΓθ1ά dehydrogenase / isomerase, and from Curvularia lunata or Cunninghatnella blakesleeana 10 for DNA encoding γ-protein-encoding proteins cortexolone. DNA sequences encoding the proteins bovine P450SCC, bovine P45qH3 or a microbial equivalent protein, bovine adrenodoxin, bovine adenotoxin reductase, 33-hydroxysteroid dehydrogenase / 15 isomerase of bovine or microbial origin, bovine ov45θ17α, Povine Ρ45θ17α of bovine or microbial origin were isolated by the following steps: 1 2 3 4 5 6 7 8 9 10 11 1. Eukaryotic Sequences (cDNAs) 2 a. Total RNA was prepared from appropriate tissue.
3 b. Man transkriberede polyA+ indeholdende RNA til 4 dobbeltstrenget cDNA og ligerede i bakteriofag- 5 vektorer.3 b. PolyA + containing RNA was transcribed into 4 double-stranded cDNA and ligated into bacteriophage vectors.
6 c. Man gennmsøgte det opnåede cDNA bibliotek med 7 32P-mærkede oligomerer, der var specifikke for 8 det ønskede cDNA eller ved gennemsøgning af et 9 isopropyl^-D-thiogalactopyranosid (IPTG)-indu 10 ceret λ-gtll cDNA bibliotek under anvendelse 11 af et specifikt (125I-mærket) antistof.6 c. The obtained cDNA library was searched with 7 32 P-labeled oligomers specific for 8 the desired cDNA or by scanning a 9 isopropyl β-D-thiogalactopyranoside (IPTG) -induced λ-gtll cDNA library. 11 of a specific (125 I-labeled) antibody.
15 DK 175573 B1 <3. Man indsatte cDNA indsætningsstykker af positive plakdannende enheder (pfu'er) i passende vektorer for at fastslå hele længden af cDNA ved nucleotidsekvensopdeling.15 DK 175573 B1 <3. CDNA inserts of positive plaque-forming units (pfu's) were inserted into appropriate vectors to determine the full length of cDNA by nucleotide sequence division.
5 2. Prokaryotlske gener a. Man fremstillede genomisk DNA fra en passende mikroorganisme.2. Prokaryotic genes a. Genomic DNA was prepared from a suitable microorganism.
b. Til opnåelse af et DNA bibliotek klonede man DNA-fragmenter i passende vektorer og transformerede i en passende coli vært.b. To obtain a DNA library, DNA fragments were cloned into appropriate vectors and transformed into a suitable coli host.
c. Man gennemsøgte dette DNA bibliotek med 32p-mærkede oligomerer, der var specifikke for det relevante gen, eller gennemsøgte et IPTG- 15 induceret λ-gtll DNA bibliotek under anvendelse af et specifikt (125I-mærket) antistof.c. This DNA library was searched for with 32β-labeled oligomers specific for the relevant gene, or an IPTG-induced λ-gtll DNA library was searched using a specific (125I-labeled) antibody.
d. Man isolerede plasmider fra positive kolonier og underklonede de indsatte DNA-fragmenter i passende vektorer for at fastslå hele længden af 20 genet.d. Plasmids were isolated from positive colonies and subcloned into the inserted DNA fragments into appropriate vectors to determine the full length of the gene.
Bemærk: Ifølge en forbedret fremgangsmåde mangfoldiggjorde man det specielle cDNA (eukaryotiske sekvenser) eller gen (prokaryotlske sekvenser) under anvendelse af 25 to specifikke oligomerer ved fremgangsmåden kendt som polymerasekædereaktionen (PCR) (Saiki et al.. Science, 239, 487-491, 1988). Derefter indsatte man det mangfol-diggjorte cDNA eller DNA i de passende vektorer.Note: According to an improved method, the particular cDNA (eukaryotic sequences) or gene (prokaryotic sequences) were multiplied using two specific oligomers by the method known as the polymerase chain reaction (PCR) (Saiki et al. Science, 239, 487-491, 1988). Then the amplified cDNA or DNA was inserted into the appropriate vectors.
Ved et aspekt af opfindelsen tilvejebringes eg-30 nede ekspressionskassetter, hvori det heterologe DNA, der er isoleret ved den ovenfor beskrevne fremgangsmåde, er anbragt mellem passende kontrolsekvenser for transkription og translation, hvilket tillader, at DNAIn one aspect of the invention, suitable expression cassettes are provided in which the heterologous DNA isolated by the method described above is arranged between appropriate control sequences for transcription and translation, allowing DNA
16 DK 175573 B1 kan eksprimeres i cellerne hos en egnet vært til opnåelse af det ønskede protein eller proteiner. Eventuelt kan initieringskontrolsekvenserne følges af en signalsekvens for udskillelse.16 DK 175573 B1 can be expressed in the cells of a suitable host to obtain the desired protein or proteins. Optionally, the initiation control sequences may be followed by a secretion signal sequence.
5 Egnede kontrolsekvenser skal indføres sammen med det strukturelle DNA ved hjælp af ovennævnte ekspressionskassetter. Ekspression gøres mulig ved transformation af en egnet værtscelle med en vektor, der indeholder kontrolsekvenser, der er forligelige med denne 10 vært, og er operativt forbundet til de kodende sekvenser, for hvilke man ønsker ekspression.Suitable control sequences must be introduced together with the structural DNA by means of the above expression cassettes. Expression is made possible by transforming a suitable host cell with a vector containing control sequences compatible with this host and operatively linked to the coding sequences for which expression is desired.
Alternativt kan man anvende egnede kontrolsekvenser, der findes i værtsgenomet. Ekspression gøres mulig ved transformation af en egnet værtscelle med en 15 vektor, der indeholder kodende sekvenser for det ønskede protein flankeret af værtssekvenser, der tillader homolog rekombination med værtens genom på en måde, så værtens kontrolsekvenser på rette vis kontrollerer ekspressionen af den indførte DNA.Alternatively, suitable control sequences found in the host genome may be used. Expression is made possible by transforming a suitable host cell with a vector containing coding sequences for the desired protein flanked by host sequences that allow homologous recombination with the host genome in a way that the host control sequences properly control the expression of the introduced DNA.
20 Som de alment forstås, omfatter betegnelsen kon trolsekvenser alle DNA-segmenter, der er nødvendige til en ordentlig regulering af ekspressionen af den kodende sekvens, til hvilken de er operativt forbundet, såsom operatorer, forstærkere og især promotorer og sekven-25 ser, der kontrollerer translationen.As is generally understood, the term control sequences include all DNA segments necessary to properly regulate the expression of the coding sequence to which they are operatively linked, such as operators, enhancers and, in particular, promoters and sequences which controls the translation.
Promotoren kan eller kan ikke være kontrollerbar ved påvirkning fra omgivelserne. Egnede promotorer fra prokaryoter inkluderer f.eks. trp promotoren {inducerbar ved tryptophanudsultning), lac promotoren 30 (inducerbar med galactoseanalog IPTG), β-lactamasepro-moteren og den fagafledte PL promotor (inducerbar ved temperaturvariation). Derudover inkluderer nyttige promotorer, især til ekspression i Bacillus, sådanne for 17 DK 175573 B1 α-amylase, protease, Spo2, spac og 0/105 samt syntetiske promotersekvenser. En foretrukket promotor er en sådan som afbildet i fig. 5 og betegnet "Hpall". Egnede promotere til ekspression i gær inkluderer 3-phospho-5 glyceratkinasepromotoren og sådanne for andre glycoly-tiske enzymer såvel som promotorer for alkoholdehydrogenase og gærphosphatase. Endvidere er promotere for transkription forlængelsesfaktor (TEF) og lactase også egnede. Pattedyrsekspressionssystemer benytter sædvan-10 ligvis promotorer afledt fra vira såsom adenoviruspro-motorer og SV40 promotor, men de inkluderer også regulerbare promotorer såsom metallothioninpromoteren, der kontrolleres af tungmetaller eller koncentrationen af glycocorticoid. virusbaserede insektcelleekspres-15 sionssystemer anses i øjeblikket også som egnede såvel som ekspressionssystemer baseret på plantecellepromotorer såsom nopalinsyntetasepromotorer.The promoter may or may not be controllable by environmental influences. Suitable promoters from prokaryotes include, e.g. the trp promoter (inducible by tryptophan starvation), the lac promoter 30 (inducible by galactose analogue IPTG), the β-lactamase promoter and the phage-derived PL promoter (inducible by temperature variation). In addition, useful promoters, especially for expression in Bacillus, include those for α1-amylase, protease, Spo2, spac and 0/105 as well as synthetic promoter sequences. A preferred promoter is one as depicted in FIG. 5 and designated "Hpall". Suitable promoters for expression in yeast include the 3-phospho-glycerate kinase promoter and those for other glycolytic enzymes as well as promoters for alcohol dehydrogenase and yeast phosphatase. Furthermore, promoters for transcriptional extension factor (TEF) and lactase are also suitable. Mammalian expression systems usually employ promoters derived from viruses such as adenovirus promoters and SV40 promoters, but they also include regulators such as the heavy metal metallothionine promoter or glycocorticoid concentration. Viral insect cell expression systems are currently also considered suitable as well as expression systems based on plant cell promoters such as nopaline synthetase promoters.
Translationskontrolsekvenser inkluderer et ribo-somblndingssted (RBS) i prokaryotiske systemer, hvor-20 imod translationen i eukaryotiske systemer kan være kontrolleret af en nucleotldsekvens med indhold af et initieringskodon såsom AUG.Translation control sequences include a ribo-binding site (RBS) in prokaryotic systems, whereas translation into eukaryotic systems may be controlled by a nucleotide sequence containing an initiation codon such as AUG.
Ud over den nødvendige promotor og translationskontrolsekvenserne kan man benytte en række andre kon-25 trolsekvenser, deriblandt sådanne der regulerer termi-nering (f.eks. til opnåelse af polyadenyleringssekvenser i eukaryotiske systemer) til at kontrollere ekspressionen. Visse systemer indeholder forstærkende elementer, der kan være gavnlige, men oftest ikke obliga-toriske til opnåelse af ekspression.In addition to the necessary promoter and translation control sequences, a number of other control sequences, including those that regulate termination (e.g., to obtain polyadenylation sequences in eukaryotic systems), can be used to control expression. Certain systems contain reinforcing elements that may be beneficial, but most often not mandatory, to achieve expression.
Opfindelsen beskriver endvidere ekspressionskassetter, der indeholder en yderligere heterolog kodende sekvens, der koder for et enzym, der alene eller i sam- 18 DK 175573 B1 arbejde med ét eller flere yderligere proteiner katalyserer et andet trin i reaktionsvejen på figur 1.The invention further discloses expression cassettes containing a further heterologous coding sequence encoding an enzyme that alone or in collaboration with one or more additional proteins catalyzes a second step in the reaction pathway of Figure 1.
En gruppe vektorer benævnt pGBSCC-n, hvori "n" er et hvilket som helst heltal mellem 1 og 17, er især 5 udviklet for DNA, der koder for P450SCC enzymet.In particular, a group of vectors called pGBSCC-n, wherein "n" is any integer between 1 and 17, has been developed for DNA encoding the P450SCC enzyme.
En anden gruppe vektorer, der betegnes pGB17a-n, hvori "n" er et hvilket som helst heltal mellem 1 og 5, er særlig udviklet for DNA, der koder for P45017ct en~ zymet.Another group of vectors, designated pGB17a-n, wherein "n" is any integer between 1 and 5, has been specifically developed for DNA encoding P45017ct an ~ zymet.
10 En yderligere gruppe vektorer betegnet med pGBC21-n, hvor "n" er et hvilket som helst heltal mellem 1 og 9, er specielt udviklet for DNA, der koder for P450C21 enzymet.A further group of vectors designated pGBC21-n, where "n" is any integer between 1 and 9, has been specifically developed for DNA encoding the P450C21 enzyme.
En yderligere gruppe vektorer betegnet med 15 pGBllp-n, hvori "n" er et hvilket som helst heltal mellem 1 og 4, er specielt udviklet for DNA, der koder for Ρ45011β enzymet.A further group of vectors designated 15 pGBIIIp-n, wherein "n" is any integer between 1 and 4, has been specifically developed for DNA encoding the Ρ45011β enzyme.
Man har ifølge et yderligere aspekt af opfindelsen udvalgt egnede værtsceller, der accepterer 20 vektorer ifølge opfindelsen og tillader, at det indførte DNA kan eksprimeres. Når man dyrker de transformerede værtsceller, findes de proteiner, der er involveret i omdannelsen af cholesterol til hydrocorti-son, i celleindholdet. Man kan påvise tilstedeværelse 25 af det ønskede DNA ved DNA hybridiseringsfremgangsmå-der, transkriptionen deraf ved RNA hybridisering, ekspression deraf ved immunologiske assays og aktiviteten deraf ved at fastslå tilstedeværelse af oxiderede produkter efter inkubering med udgangsforbindelsen in 30 vitro eller in vivo.According to a further aspect of the invention, suitable host cells have been selected which accept 20 vectors of the invention and allow the introduced DNA to be expressed. When culturing the transformed host cells, the proteins involved in the conversion of cholesterol to hydrocortisone are found in the cell contents. One can detect the presence of the desired DNA by DNA hybridization methods, its transcription by RNA hybridization, its expression by immunological assays, and its activity by ascertaining the presence of oxidized products after incubation with the starting compound in 30 vitro or in vivo.
Transformerede mikroorganismer er foretrukne værter, især bakterier (mere foretrukket Escherichia col i og Bacillus og Streptomyces specier) og gærarter DK 175573 B1 19 (såsom Saccharomyces og Kluyveromyces♦) Andre egnede værtsorganismer findes blandt planter og dyr, deriblandt insekter, fra hvilke man benytter de isolerede celler i en cellekultur, såsom COS celler, C^27 celler, 5 CHO celler og Spodoptera fruqlperda (Sfg) celler. Alternativt kan man benytte en transgenisk plante eller dyr.Transformed microorganisms are preferred hosts, especially bacteria (more preferably Escherichia col i and Bacillus and Streptomyces species) and yeast species DK 175573 B1 19 (such as Saccharomyces and Kluyveromyces ♦) Other suitable host organisms are found among plants and animals including insects from which they are used. isolated cells in a cell culture, such as COS cells, C ^ 27 cells, 5 CHO cells, and Spodoptera frupplperda (Sfg) cells. Alternatively, a transgenic plant or animal may be used.
En særlig type af rekombinante værtsceller er sådanne, hvori to eller flere ekspressionskassetter 10 ifølge opfindelsen er blevet indført, såsom pGBSCC/ ADX-1, eller som er blevet transformeret med en ekspressionskassette, der koder for mindst to heterologe proteiner, hvilket tillader cellen at producere mindst to proteiner involveret i reaktionsvejen fra fig. 1.A particular type of recombinant host cells are those in which two or more expression cassettes 10 of the invention have been introduced, such as pGBSCC / ADX-1, or which have been transformed with an expression cassette encoding at least two heterologous proteins, allowing the cell to produce at least two proteins involved in the reaction pathway of FIG. First
15 Et vigtigt træk ved opfindelsen er, at de frem stillede nye celler er ikke blot i stand til at producere proteiner, der er involveret i den oxidative omdannelse af steroider, der til slut fører til hydrocor-tison, men også til at benytte disse proteiner på ste-20 det ved den ønskede oxidative omdannelse af den tilsvarende substratforbindelse, der sættes til kulturvæsken. Steroider er foretrukne substrater. Cellerne transformeret med heterolog DNA er især egnet til at dyrkes med de steroider, der er nævnt i fig. 1, deriblandt andre 25 steroler, såsom β-sltosterol. Som et resultat opnår man oxiderede steroider.An important feature of the invention is that the novel cells produced are not only capable of producing proteins involved in the oxidative conversion of steroids that eventually lead to hydrocortisone, but also to utilize these proteins. instead of the desired oxidative conversion of the corresponding substrate compound added to the culture liquid. Steroids are preferred substrates. The cells transformed with heterologous DNA are particularly suitable for culturing with the steroids mentioned in FIG. 1, including other sterols, such as β-cortosterol. As a result, oxidized steroids are obtained.
Afhængig af tilstedeværelse i værtscellen af forskelligt heterologt DNA, der koder for proteiner involveret i reaktionsvejen på fig. 1, er adskillige bio-30 kemiske omdannelser mulige omfattende sidekædespaltning af en sterol og/eller oxidative modifikationer på Cll, C17, C3 og C21. Af denne grund er ekspressionskassetterne ifølge opfindelsen nyttige ved konstruktion af et 20 DK 175573 B1 multigenisk system, der kan udføre successive intra-cellulære transformationer af de mange trin i sekvensen vist på fig. l. Det kan være nødvendigt at indføre ekspressionskassetter i den ønskede vært, der samlet 5 koder for de ønskede proteiner. I visse tilfælde kan en eller flere af proteinerne, der er involveret i reaktionsvejen, allerede være til stede i værten som et naturligt protein, der udøver samme aktivitet. F.eks. kan ferredoxin, ferredoxinreduktase og P450 reduktase 10 allerede være til stede i værten. Under disse omstændigheder skal man kun tilvejebringe de resterende enzymer ved rekombinant transformation.Depending on the presence in the host cell of different heterologous DNA encoding proteins involved in the reaction pathway of FIG. 1, several biochemical conversions are possible including side chain cleavage of a sterol and / or oxidative modifications on C11, C17, C3 and C21. For this reason, the expression cassettes of the invention are useful in constructing a multigenic system capable of performing successive intracellular transformations of the many steps of the sequence shown in FIG. l. It may be necessary to insert expression cassettes into the desired host, which together encode 5 the desired proteins. In some cases, one or more of the proteins involved in the reaction pathway may already be present in the host as a natural protein that exerts the same activity. Eg. ferredoxin, ferredoxin reductase and P450 reductase 10 may already be present in the host. In these circumstances, only the remaining enzymes must be provided by recombinant transformation.
Som et alternativ til biokemiske omdannelser in vivo indsamler man de proteiner, der er involveret i omdannelse af cholesterol til hydrocortison, renser dem efter behov og benytter dem til in vitro omdannelse af steroider i et cellefrit system, f.eks. immobiliseret på en kolonne. Alternativt kan man benytte den mere eller mindre rensede blanding, der indeholder ét eller 20 flere enzymer for reaktionsvejen som sådan til steroidomdannelsen. Et eksempel på en vært indeholder DNA, der koder for to heterologe proteiner, nemlig enzymet P450SCC og proteinet ADX, der er nødvendige for produktionen af pregnenolon. Ved sammenligning med en 25 vært med kun P450SCC DNA er udbyttet af pregnenolon i en cellefri ekstrakt efter tilsætning af ADR, NADPH og cholesterol betydelig forbedret.As an alternative to biochemical conversions in vivo, the proteins involved in converting cholesterol to hydrocortisone are collected, purified as needed and used for in vitro conversion of steroids into a cell-free system, e.g. immobilized on a column. Alternatively, the more or less purified mixture containing one or more enzymes for the pathway as such can be used for the steroid conversion. An example of a host contains DNA encoding two heterologous proteins, namely the enzyme P450SCC and the protein ADX needed for the production of pregnenolone. When compared to a host of only P450SCC DNA, the yield of pregnenolone in a cell-free extract after the addition of ADR, NADPH and cholesterol is significantly improved.
Opfindelsen tilvejebringer ekspressionskassetter, der er nødvendige til konstruktion af en ettrins-30 produktionsproces for adskillige nyttige steroider.The invention provides expression cassettes necessary for constructing a one-step production process for several useful steroids.
Idet man udgår fra billige og let tilgængelige udgangsforbindelser, er den især egnet til produktionen af hydrocortison og mellemproduktforbindelser. Opfindelsen 21 DK 175573 B1 gør de traditionelle kostbare kemiske reaktioner forældede. Mellemprodukterne behøver ikke at blive isolerede. Bortset fra de nye værtsceller er selve processerne, der benyttes til dyrkning af disse celler ved 5 steroidomdannelserne, analoge til bioteknologiske fremgangsmåder, der er velkendte.Starting from cheap and readily available starting compounds, it is particularly suitable for the production of hydrocortisone and intermediate compounds. The invention makes the traditional costly chemical reactions obsolete. The intermediates do not need to be isolated. Apart from the new host cells, the very processes used to grow these cells by the steroid conversions are analogous to biotechnological processes which are well known.
Opfindelsen illustreres yderligere af de følgende eksempler.The invention is further illustrated by the following examples.
10 Eksempel 1Example 1
Molekylær kloning af et fuld længde cDNA, der koder for det bovine cytochrom P450 sidekædespaltende enzym (P450SCC).Molecular cloning of a full-length cDNA encoding the bovine cytochrome P450 side chain cleavage enzyme (P450SCC).
15 Almene kloningsteknikker såvel som analyser for DNA og RNA er blevet benyttet som beskrevet i håndbogen af T. Maniatis et al., Molecular Cloning, Cold Spring Harbor Laboratory, 1982. Med mindre andet angives, blev alle DNA modificerende enzymer, molekylære kloningsbæ- 20 rere og E. coli stammer opnået kommercielt og benyttet under anvendelse af fabrikantens instruktioner. Materialer og apparater til adskillelse og rensning af DNA og RNA blev benyttet, idet man fulte fabrikantens instruktioner.General cloning techniques as well as DNA and RNA assays have been used as described in the manual of T. Maniatis et al., Molecular Cloning, Cold Spring Harbor Laboratory, 1982. Unless otherwise indicated, all DNA modifying enzymes, molecular cloning agents, were used. coli and E. coli strains obtained commercially and used using the manufacturer's instructions. Materials and apparatus for separating and purifying DNA and RNA were used, following the manufacturer's instructions.
25 Man fremstillede binyrebarkvæv af kvæg fra fri ske bovine nyrer, der blev lynfrosset i flydende nitro-Adrenal bark tissues of bovine kidney free bovine kidneys were prepared which were frozen in liquid nitrogen.
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gen og lagret ved -80 C.gene and stored at -80 C.
Ud fra dette frosne bovine binyrebark fremstillede man total cellulær RNA, som beskrevet af Auffrey 30 0g Rougeon (Eur. J. Biochem., 107, 303-314, 1980). Man opnåede adrenal poly A+ RNA ved at opvarme den totale RNA prøve til 65 C før polyA udvælgelse på oligo(dT) chromatografi.From this frozen bovine adrenal cortex, total cellular RNA was prepared as described by Auffrey 30 µg Rougeon (Eur. J. Biochem. 107, 303-314, 1980). Adrenal poly A + RNA was obtained by heating the total RNA sample to 65 ° C before polyA selection on oligo (dT) chromatography.
22 DK 175573 B1 DNA'er, der var komplementære til polyA+ RNA fra bovint binyrebark, blev syntetiseret på følgende måde:B1 DNAs complementary to polyA + RNA from bovine adrenal cortex were synthesized as follows:
Man neutraliserede 10 yg polyA+ RNA behandlet med methylmercurihydroxid med β-mercaptoethanol. Denne 5 blanding blev tilpasset til 50 mM Tris/HCl (pH 8,3 ved10 µg of polyA + RNA treated with methylmercury hydroxide was neutralized with β-mercaptoethanol. This mixture was adjusted to 50 mM Tris / HCl (pH 8.3 at
42°C), 40 mM KCl, 6 mM MgCl2, 10 mM DTT, 3000 U42 ° C), 40 mM KCl, 6 mM MgCl 2, 10 mM DTT, 3000 U
RNasin/ml, 4 mM Na4P207, 50 yg actinomycin D/ml, 0,1 mgRNasin / ml, 4 mM Na4P207, 50 µg actinomycin D / ml, 0.1 mg
oligo(dT12_18)/ml, 0,5 mM dATP, 0,5 mM dTTP, 0,25 mMoligo (dT12_18) / ml, 0.5 mM dATP, 0.5 mM dTTP, 0.25 mM
dCTP og 400 yCi a32P-dCTP/ml, alt i et slutrumfang på 10 100 yl. Blandingen blev holdt på is i 10 minutter, op- 0 varmet i 2 minutter til 42 C og man påbegyndte syntesen ved at tilsætte 150 U AMV revers transkriptase (Anglian Biotechnology Ltd.); inkubation blev foretaget i l time ved 42°c.dCTP and 400 µCi α 32 P-dCTP / ml, all in a final volume of 10 100 µl. The mixture was kept on ice for 10 min, heated for 2 min to 42 ° C and synthesis started by adding 150 U AMV reverse transcriptase (Anglian Biotechnology Ltd.); incubation was performed for 1 hour at 42 ° C.
15 Syntese af den anden streng blev udført, idet man tilsatte DNA polymerase og RNase H ifølge Gubier og Hoffman (Gene, 25, 263-269, 1983). Efter behandling af ds DNA med T4 DNA polymerase (BRL) til opnåelse af stumpe ender ligerede man decamere EcoRI linkere 20 (Biolabs Inc.) til ds DNA fragmenterne. Efter fordøjelse med EcoRI (Boehringer) adskilte man dobbeltstrenget DNA fragmenter fra de mange EcoRI linkere ved hjælp af Biogel AIS m (Bio-Rad) chromatografi. Man ligerede omtrent 200 ng EcoRI-linker med indhold af dobbeltstren-25 get cDNA med 10 yg EcoRI fordøjet og kalvetarmsphospha-tase (Boehringer) behandlet λ-gtll vektor DNA (Promega) ved hjælp af T4-DNA ligase (Boehringer) som beskrevet af Huynh et al. (I: "DNA cloning techniques: A practical approach", side 49-78, Oxford IRL-press, 1985). Man 30 benyttede fager opnået efter in vitro sammenpakning af ligeringsblandingen til at inficere coli Y1090 værten {Promega).Synthesis of the second strand was performed, adding DNA polymerase and RNase H according to Gubier and Hoffman (Gene, 25, 263-269, 1983). After treatment of ds DNA with T4 DNA polymerase (BRL) to obtain blunt ends, the EcoRI linkers 20 (Biolabs Inc.) were ligated to the ds DNA fragments. After digestion with EcoRI (Boehringer), double-stranded DNA fragments were separated from the many EcoRI linkers by Biogel AIS m (Bio-Rad) chromatography. Approximately 200 ng of EcoRI linker containing double stranded cDNA with 10 µg EcoRI digested and calf phosphate (Boehringer) treated λ-gtll vector DNA (Promega) was ligated using T4 DNA ligase (Boehringer) as described by Huynh et al. (In: "DNA cloning techniques: A practical approach", pages 49-78, Oxford IRL press, 1985). Phages obtained after in vitro packaging of the ligation mixture were used to infect the coli Y1090 host {Promega).
Fra dette cDNA bibliotek gennemsøgte man omtrent 106 plak-dannende enheder (pfu'er) med en 32P endemar- 23 DK 175573 B1 keret syntetisk oligomer SCC-1 (5'-GGC TGA CGA AGT CCT GAG ACA CTG GAT TCA GCA CTGG-3'), specifik for bovine P450SCC DNA sekvenser som beskrevet af Morohashi et al.From this cDNA library, approximately 106 plaque-forming units (pfu's) were searched with a 32P end-marker synthetic oligomer SCC-1 (5'-GGC TGA CGA AGT CCT GAG ACA CTG GAT TCA GCA CTGG-3 ) specific for bovine P450SCC DNA sequences as described by Morohashi et al.
(Proc. Natl. Acad. Sci. USA, 81, 4647-4651, 1984). Man 5 opnåede seks hybridiserende pfu'er og rensede yderligere disse ved to yderligere serier af infektion, udplat-ning og hybridisering. Man underklonede P450SCCcDNA EcoRl indsætningsstykkerne i EcoRI stedet på pTZl8R (Pharmacia). Klonen pGBSCC-1 (figur 2), der indeholdt 10 det største EcoRI indsætningsstykke (1,4 kb) afledt af klonen λ-gtil SCC-54, blev yderligere analyseret ved restriktionsenzymkortlægning og sekvensopdeling.(Proc. Natl. Acad. Sci. USA, 81, 4647-4651, 1984). Six hybridizing PFUs were obtained and further purified by two further series of infection, flattening and hybridization. The P450SCCcDNA EcoR1 inserts were subcloned into the EcoRI site of pTZ18R (Pharmacia). The clone pGBSCC-1 (Figure 2), containing 10 the largest EcoRI insert (1.4 kb) derived from the λ-gtil SCC-54 clone, was further analyzed by restriction enzyme mapping and sequence breakdown.
Sekvensdata afslørede, at pGBSCC-1 EcoRI indsætningsstykket var identisk med nucleotidsekvensen fra 15 sCCcDNA mellem positionerne 251 og 1824 på P450SCCcDNA kortet, som beskrevet af Morohashi et al.Sequence data revealed that the pGBSCC-1 EcoRI insert was identical to the nucleotide sequence of 15 sCCcDNA between positions 251 and 1824 on the P450SCCcDNA map, as described by Morohashi et al.
De resterende 5’-P450SCCcDNA nucleotider blev syntetisk afledt ved at klone et 177 bp Pst/Hindlll fragment i de passende steder på pTZ18R til opnåelse af 20 pTZ/synlead som vist på figur 3, der ud over nucleoti-derne, der kodede for det modne P450SCC protein fra positionerne 118 til 273 som meddelt af Morohashi et al., yderligere indeholdt restriktionssteder for Seal, Avrll og Stul uden at påvirke den beregnede aminosyresekvens 25 for P450scc proteinet.The remaining 5'-P450SCCcDNA nucleotides were synthetically derived by cloning a 177 bp Pst / HindIII fragment at the appropriate sites on pTZ18R to obtain 20 pTZ / synlead as shown in Figure 3, which in addition to the nucleotides encoding it mature P450SCC protein from positions 118 to 273 as disclosed by Morohashi et al., further contained restriction sites for Seal, Avr11 and Stul without affecting the calculated amino acid sequence 25 of the P450scc protein.
Man konstruerede P45qSCCcDNA i fuld længde ved molekylær kloning i E. coll JM101 (ATCC 33876) af en ligationsblanding, der indeholdt det 1372 bp lange Hindlll/Kpnl pGBSCC-1 fragment, det 177 bp lange 30 pst/Hindlll pTZ/synlead fragment og pTZ19R DNA fordøjet med PstI og KpnI.Full length P45qSCCcDNA was constructed by molecular cloning in E.coll JM101 (ATCC 33876) of a ligation mixture containing the 1372 bp HindIII / KpnI pGBSCC-1 fragment, the 177 bp 30 pst / HindIII pTZ / synlead fragment and pTZ19R DNA digested with PstI and KpnI.
Det opnåede plasmid, pGBSCC-2, der indeholdt alle nucleotidsekvenserne, der koder for det modne bovine 24 DK 175573 B1 p450 sidekædespaltende protein, ses på figur 4.The plasmid obtained, pGBSCC-2, which contained all the nucleotide sequences encoding the mature bovine, is shown in Figure 4.
Eksempel 2 5 Konstruktion, transformation og ekspression af P450SCC i bakterieværten Bacillus subtills.Example 2 Construction, transformation and expression of P450SCC in the bacterial host Bacillus subtills.
Til opnåelse af ekspression af cytochrom p450scc i en Bacillus vært overførte man P450SCCcDNA sekvenser 10 til en E. coll/Baclllus overføringsvektor pBHA-1.To obtain expression of cytochrome p450scc in a Bacillus host, P450SCCcDNA sequences 10 were transferred to an E.coll / Baclllus transfer vector pBHA-1.
Figur 5 viser nucleotidsekvensen for overfø-ringsplasmidet pBHA-1. Plasmidet består af positionerne 11-105 og 121-215: bakteriofag FD terminator (dobbelt); positionerne 221-307: en del af plasmid pBR322 (nemlig 15 positionerne 2069-2153); positionerne 313-768: bakte riofag Fl, replikationsorigo (nemlig positionerne 5482-5943); positionerne 772-2571: en del af plasmid pBR322, nemlig replikationsorigo og β-lactamasegenet; positionerne 2572-2685: transposon TN903, komplet gen-20 om; positionerne 2719-2772: tryptophanterminator (dobbelt); positionerne 2773-3729: transposon Tn9, chloramphenicolacetyltransferasegenet. Nucleotiderne ved positionerne 3005 (A), 3038 (C), 3302 (A) og 3409 (A) afviger fra den cat kodende sekvens af Vild type. Disse 25 mutationer blev indført for at eliminere Ncol, Ball,Figure 5 shows the nucleotide sequence of the transfer plasmid pBHA-1. The plasmid consists of positions 11-105 and 121-215: bacteriophage FD terminator (double); positions 221-307: a portion of plasmid pBR322 (namely, positions 2069-2153); positions 313-768: baked riophage F1, replication origo (namely positions 5482-5943); positions 772-2571: a portion of plasmid pBR322, namely, replication origins and the β-lactamase gene; positions 2572-2685: transposon TN903, complete gene; positions 2719-2772: tryptophan terminator (double); positions 2773-3729: transposon Tn9, the chloramphenicol acetyltransferase gene. The nucleotides at positions 3005 (A), 3038 (C), 3302 (A) and 3409 (A) differ from the wild-type cat coding sequence. These 25 mutations were introduced to eliminate NcoI, Ball,
EcoRI og PvuII stederne: Positionerne 3730-3804: multipelt kloningssted; positionerne 3807-7264: en del af plasmid pUBHO, der indeholder Bacillus "Hpall” promoter, replikationsfunktionen og kanamycinresistensgenet 30 (EcoRI-PvuII fragment) McKenzie et al., Plasmid 15, 93-103, 1986 og McKenzie et al., Plasmid 17, 83-85, 1987); positionerne 7267-7331: multipelt kloningssted. Fragmenterne blev sammensat ved kendt kloningsteknik, DK 175573 B1 25 f.eks. ved udfyldning af klæbende ender med Klenow, adapterkloning, etc. Alle data stammede fra Genbank, National Nucleic Acid Sequence Data Bank, NIH, USA.EcoRI and PvuII sites: Positions 3730-3804: multiple cloning site; positions 3807-7264: a portion of plasmid pUBHO containing Bacillus "Hpall" promoter, the replication function and kanamycin resistance gene 30 (EcoRI-PvuII fragment) McKenzie et al., Plasmid 15, 93-103, 1986 and McKenzie et al., Plasmid 17 , 83-85, 1987); positions 7267-7331: multiple cloning site The fragments were composed by known cloning technique, DK 175573 B1 25, for example, by filling in sticky ends with Klenow, adapter cloning, etc. All data came from Genbank, National Nucleic Acid Sequence Data Bank, NIH, USA.
pGBSCC-3 blev afledt ved molekylær kloning i 5 coli JM101 af KpnI/Sphl P45qSCCcDNA indsætningsstykket fra pGBSCC-2 (beskrevet i eksempel 1) i passende steder på pBHA-1 som vist på figur 6.pGBSCC-3 was derived by molecular cloning in 5 coli JM101 of the KpnI / Sphl P45qSCCcDNA insert from pGBSCC-2 (described in Example 1) at appropriate sites on pBHA-1 as shown in Figure 6.
Ved molekylær kloning i E. coll JM101 kunne man indføre methioninitieringskodonet ved at udveksle 10 Stul/Sphl fragmentet i pGBSCC-3 med et syntetisk afledt SphI/StuX fragment.By molecular cloning in E.coll JM101, the methion initiation codon could be introduced by exchanging the 10 Stul / Sphl fragment of pGBSCC-3 with a synthetically derived SphI / StuX fragment.
SPH 1 STU 1 CATATGATCAGTACTAAGACCCCTAGG GTACGTATACTAGTCATGATTCTGGGGATCC NDE 1 15 indeholdende et Ndel sted ved ATG initieringskodonet.SPH 1 STU 1 CATATGATCAGTACTAAGACCCCTAGG GTACGTATACTAGTCATGATTCTGGGGATCC NDE 1 15 containing an Ndel site at the ATG initiation codon.
Det opnåede plasmid pGBSCC-4 vises på figur 7. Man indførte "Hpa II" Bacillus promoteren opstrøms for P450SCCCDNA sekvenser ved fordøjelse af pGBSCC-4 med 20 restriktionsenzymet Ndel, adskillelse af E. coli delen af overføringsplasmidet ved agarosegelelektroforese og påfølgende religering og transformation i Bacillus subtills 1A40 (BGSC 1A40) kompetente celler. Man analyserede neomycinresistente kolonier til opnåelse af pla-25 smidet pGBSCC-5 (figur 8). Man studerede ekspression af bovin P450SCC ved at fremstille en celleproteinfraktion af en kultur dyrket natten over ved 37 C i TSB medium (Gibco) med indhold af 10 μρ/πιΐ neomycin. Celler fra 100 μΐ kultur, der indeholdt omtrent 5xl06 celler, blev 30 indhøstet ved centrifugering og udsuspenderet i 10 mM Tris/HCl pH 7,5. Lysering blev udført ved tilsætning af 1 mg/ml lysozym og påfølgende inkubering i 15 minutter ved 37*C. Efter behandling med 0,2 mg DNase/ml i 5 mi- 26 DK 175573 B1 nutter ved 37 C tilpassede man blandingen til l x SB puffer, som beskrevet af Laemmli, Nature 227, 680-685, 1970, i et slutrumfang på 200 μΐ. Efter opvarmning i 5The obtained plasmid pGBSCC-4 is shown in Figure 7. The "Hpa II" Bacillus promoter upstream of P450SCCCDNA sequences was introduced by digesting pGBSCC-4 with the restriction enzyme NdeI, separation of the E. coli portion of the transfer plasmid by agarose gel electrophoresis, and subsequent religation. Bacillus subtills 1A40 (BGSC 1A40) competent cells. Neomycin-resistant colonies were analyzed to obtain the plasmid pGBSCC-5 (Figure 8). Bovine P450SCC expression was studied by preparing a cell protein fraction of a culture grown overnight at 37 C in TSB medium (Gibco) containing 10 μρ / πιΐ neomycin. Cells from 100 μΐ culture containing approximately 5x106 cells were harvested by centrifugation and suspended in 10 mM Tris / HCl pH 7.5. Lysing was performed by adding 1 mg / ml lysozyme and subsequent incubation for 15 minutes at 37 ° C. After treatment with 0.2 mg of DNase / ml for 5 minutes at 37 ° C, the mixture was adjusted to 1x SB buffer, as described by Laemmli, Nature 227, 680-685, 1970, at a final volume of 200 μΐ. . After heating in 5
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minutter til 100 C underkastede man 15 μΐ af blandin-5 gen en 7,5% SDS/polyacrylamidgelelektroforese. Som vist på figur 9 (bane c) kunne man påvise et 53 kDa bånd efter immunblotning af gelen, der var sondebehandlet med P45qSCC specifikke antistoffer.Minutes to 100 ° C, 15 μΐ of the mixture was subjected to a 7.5% SDS / polyacrylamide gel electrophoresis. As shown in Figure 9 (lane c), a 53 kDa band could be detected after immunoblotting the gel probed with P45qSCC specific antibodies.
Man kunne opnå specifikke bovine P450SCC anti-10 stoffer ved at immunisere kaniner med renset P450SCC protein isoleret fra bovint binyrebarkvæv.Specific bovine P450SCC antibodies could be obtained by immunizing rabbits with purified P450SCC protein isolated from bovine adrenal tissue.
Eksempel 3 15 Ekspression af P45oscc 1 bakterieværten Bacillus llchenlformls.Example 3 Expression of P45oscc 1 bacterial host Bacillus llchenlformls.
Man udførte ekspression af bovin p450scc 1 — llchenlformls ved at transformere plasmidet pGBSCC-5 i 20 den egnede værtsstamme B. llchenlformls T5(CBS 470.83).Expression of bovine p450scc1 - llchenlformls was performed by transforming the plasmid pGBSCC-5 into the appropriate host strain B. llchenlformls T5 (CBS 470.83).
Man analyserede en celleproteinfraktion fremstillet som beskrevet i eksempel 2 fra en kultur dyrket natten over i tryptonsojaurt (TSB) medium (Oxoid) med indhold af 10 pg/ml neomycin, ved hjælp af SDS/PAGE og Western blot.A cell protein fraction prepared as described in Example 2 from a culture grown overnight in tryptone soybean (TSB) medium (Oxoid) containing 10 pg / ml neomycin was analyzed by SDS / PAGE and Western blot.
25 som vist på figur 9 (bane f) kunne man synliggøre et proteinbånd på 53 kDa efter inkuberlng af nitrocellulosefilteret med antistoffer, der var specifikke for bovin P450SCC. En transformant, SCC-201 blev yderligere analyseret for in vivo aktivitet af P450SCC (se eksem-30 pel 11).As shown in Figure 9 (lane f), a 53 kDa protein band could be visualized after incubation of the nitrocellulose filter with antibodies specific for bovine P450SCC. A transformant, SCC-201 was further assayed for in vivo activity of P450SCC (see Example 11).
DK 175573 B1 27DK 175573 B1 27
Eksempel 4Example 4
Ekspression af P450SCC i bakterieværten Escherichia coll.Expression of P450SCC in the bacterial host Escherichia coll.
5 (a) Konstruktion af ekspressionskassetten.5 (a) Construction of the expression cassette.
Til opnåelse af en egnet ekspressionsvektor i værten E. coll for bovin P450SCC muterede man pTZl8R ved positionsrettet mutagenese som beskrevet af Zoller 10 og Smith {Methods in Enzymology 100, 468-500, 1983);To obtain a suitable expression vector in the E. coll host bovine P450SCC host, pTZ18R was mutated by position-directed mutagenesis as described by Zoller 10 and Smith (Methods in Enzymology 100, 468-500, 1983);
Zoller og Smith (Methods in Enzymology 154, 329-350, 1987) og Kramer og Fritz (Methods in Enzymology 154, 350-367, 1987). Plasmider af stammer til in vitro mutagenese eksperimenter blev opnået fra Pharmacia Inc.Zoller and Smith (Methods in Enzymology 154, 329-350, 1987) and Kramer and Fritz (Methods in Enzymology 154, 350-367, 1987). Plasmids of strains for in vitro mutagenesis experiments were obtained from Pharmacia Inc.
15 Man benyttede en syntetisk afledet oligomer med sekvensen: 51 -CAG G AA ACA CAT ATG ACC ATG ATT-3'A synthetically derived oligomer of the sequence was used: 51-CAG G AA ACA CAT ATG ACC ATG ATT-3 '
I_II_I
Ndel 20 til at danne et Ndel restriktionssted ved ATG initie-ringskodonet i lac Z genet i pTZl8R.Ndel 20 to form an Ndel restriction site by the ATG initiation codon of the lac Z gene of pTZ18R.
Det herved opnåede plasmid pTZl8RN blev fordøjet med Ndel og Kpnl, og man indsatte Ndei/κρηΙ DNA fragmentet fra pGBSCC-4, der indeholdet SCCcDNA i fuld 25 længde, ved molekylær kloning som vist på figur 10.The resulting plasmid pTZ18RN was digested with NdeI and KpnI, and the Ndei / κρηΙ DNA fragment from pGBSCC-4 containing full-length SCCcDNA was inserted by molecular cloning as shown in Figure 10.
Transkriptionen af P450SCC sekvenser i det heraf afledte plasmid pGBSCC-17 vil være drevet af E. coli lacpromoteren. 1 (b) Ekspression af P450SCC i værten E. coll JM101.The transcription of P450SCC sequences in the derived plasmid pGBSCC-17 will be driven by the E. coli lac promoter. 1 (b) Expression of P450SCC in host E. coll JM101.
Man indførte pGBSCC-17 i E. coll JM101 kompetente celler ved at udvælge ampicillinresistente kolonier. Ekspressionen af cytochrom P450SCC blev studeret, idet 28 DK 175573 B1 man fremstillede en celleproteinfraktion (beskrevet i eksempel 2) af trans formanterne SCC-301 og 302 fra en kultur dyrket natten over ved 37°C i 2 x TY medium (der indeholder pr. liter deioniseret vand: Bacto trypton 5 (Difco), 16 g; gærekstrakt (Difco), 10 g og NaCl, 5 g) med indhold af 50 vig/ml ampicillin.PGBSCC-17 was introduced into E.coll JM101 competent cells by selecting ampicillin resistant colonies. The expression of cytochrome P450SCC was studied by preparing a cell protein fraction (described in Example 2) of the transformants SCC-301 and 302 from a culture grown overnight at 37 ° C in 2 x TY medium (containing per ml). liter of deionized water: Bacto tryptone 5 (Difco), 16 g; yeast extract (Difco), 10 g and NaCl, 5 g) containing 50 µg / ml ampicillin.
Man analyserede proteinfraktioner ved SDS/PAGE farvet med Coomassie brilliantblåt (figur 11A) eller ved Western blot, hvorved man som sonder anvendte anti-10 stoffer, der var specifikke for bovint P450SCC (figur 11B). Begge analyser viser et protein af den forventede længde (figur 11A, banerne 1 og 2 og figur 11B, banerne 3 eller 4) for henholdsvis transformanterne SCC-301 og SCC-302, der ikke findes i E. coli JM101 kontrolstammen 15 (figur 11A, bane 3 og figur 11B, bane 2).Protein fractions were analyzed by SDS / PAGE stained with Coomassie brilliant blue (Figure 11A) or by Western blot, using antibodies specific for bovine P450SCC (Figure 11B) as probes. Both assays show a protein of the expected length (Figure 11A, lanes 1 and 2 and Figure 11B, lanes 3 or 4) for transformers SCC-301 and SCC-302, respectively, not found in E. coli JM101 control strain 15 (Figure 11A , lane 3 and Figure 11B, lane 2).
Eksempel 5Example 5
Konstruktion, transformation og ekspression af P450SCC 20 i gæren Kluyveromyces lactls.Construction, transformation and expression of P450SCC 20 in the yeast Kluyveromyces lactls.
(a) Indførelse af geneticinresistensmarkøren i pUC19.(a) Introduction of the geneticin resistance marker into pUC19.
Man indsatte et DNA fragment omfattende Tn5 genet (Reiss et al., EMBO J., 3, 3317-3322, 1984), der 25 overfører resistens mod geneticin under styring af al-koholdehydrogenase I (ADHI) promoteren fra S. cerevi-slae, på lignende måde som beskrevet af Bennetzen og Hall (J. Biol. Chem., 257, 3018-3025, 1982) i Smal stedet på pUC19 (Yanisch-Perron et al., Gene, 33, 30 103-119, 1985). Det opnåede plasmid pUCG418 vises på figur 12.A DNA fragment comprising the Tn5 gene (Reiss et al., EMBO J., 3, 3317-3322, 1984) was inserted, which transfers resistance to geneticin under the control of the alcoholic hydrogenase I (ADHI) promoter of S. cerevi strain. , in a similar manner as described by Bennetzen and Hall (J. Biol. Chem., 257, 3018-3025, 1982) in the Smal site at pUC19 (Yanisch-Perron et al., Gene, 33, 103-119, 1985). . The obtained plasmid pUCG418 is shown in Figure 12.
E. coli med indhold af pUCG418 blev deponeret ved Centraal Bureau vor Schimmelcultures med depone- 29 DK 175573 B1 ringsnummer CBS 872.87.E. coli containing pUCG418 was deposited at the Centraal Bureau vor Schimmelcultures with depository no. CBS 872.87.
(b) Konstruktion af ekspressionskassetten.(b) Construction of the expression cassette.
Man konstruerede en vektor omfattende pUCG418 5 (beskrevet i eksempel 5(a)), gennemskåret med Xbal og Hindlll, Xbal-Sall fragmentet fra pGB901 med indhold af lactasepromoter (se J.A. van den Berg et al., Continuation in part af US patentansøgning SN 572.414: "Kluyveromyces as a host strain") og syntetisk DNA om-10 fattende en del af den 3'-ikke kodende region af lacta-segenet fra K. lactis. Dette plasmid pGB950 ses på figur 13.A vector comprising pUCG418 5 (described in Example 5 (a)), intersected with Xbal and HindIII, the Xbal-Sall fragment of pGB901 containing lactase promoter (see JA van den Berg et al., Continuation in part of US patent application SN 572,414: "Kluyveromyces as a host strain") and synthetic DNA comprising part of the 3 'non-coding region of the K. lactis lacta gene. This plasmid pGB950 is seen in Figure 13.
Man gennemskår pGB950 med Sall og Xhol og indsatte syntetisk DNA: 15 SAL 1 STU 1 XHO 1You cut through pGB950 with Sall and Xhol and inserted synthetic DNA: 15 SAL 1 STU 1 XHO 1
TCGACAAAAATGATCAGTACTAAGACTCCTAGGCCTATCGATTCTCGACAAAAATGATCAGTACTAAGACTCCTAGGCCTATCGATTC
GTTTTTACTAGTCATGATTCTQAGGATCCGGATAGCTAAGAGCTGTTTTTACTAGTCATGATTCTQAGGATCCGGATAGCTAAGAGCT
til opnåelse af plasmid pGBSCC-6 som vist på figur 13.to obtain plasmid pGBSCC-6 as shown in Figure 13.
20 Man isolerede StuI-EcoRI fragmentet fra pGBSCC-2 (se eksempel 1) med indhold af den P45qSCC kodende region og fyldte den klæbende ende under anvendelse af Klenow DNA polymerase. Dette fragment blev indsat i pGBSCC-6, der var gennemskåret med Stul. Plasmidet, der 25 indeholdt fragmentet i korrekt orientering, blev kaldt pGBSCC-7 (se figur 14).The StuI-EcoRI fragment was isolated from pGBSCC-2 (see Example 1) containing the P45qSCC coding region and filled the adhesive end using Klenow DNA polymerase. This fragment was inserted into pGBSCC-6 cut with Stul. The plasmid containing the fragment in the correct orientation was called pGBSCC-7 (see Figure 14).
(c) Transformation af K. lactis.(c) Transformation of K. lactis.
Man dyrkede K. lactis stamme CBS 2360 i 100 ml 30 YEPD-medium (1% gærekstrakt, 2% pepton, 2% glucosemono-hydrat) med indhold af 2,5 ml af en 6,7% (w/w) gærni-trogenbase (Difco laboratories) opløsning til en OD610 på omkring 7. Celler blev indsamlet fra 10 ml af denne 30 DK 175573 B1 kultur ved centrifugering, man vaskede dem med TE-puffer (10 mM Tris-HCl pH 7,5; 0,1 mM EDTA) og udsuspenderede dem i 1 ml TE-puffer. Hertil blev sat et lige så stort rumfang 0,2 ml lithiumacetat, og man inku- 0 5 berede blandingen i 1 time ved 30 C i et vandbad under omrystning. Man gennemskår 15 yg pGBSCC-7 ved det unikke Sadl sted i lactasepromotoren, udfældede med ethanol og suspenderede igen i 15 μΐ TE-puffer. Dette DNA præparat blev sat til 100 yl af de præinkuberede cel-10 ler, og man lod inkuberingen foregå i yderligere 30 minutter, man tilsatte et lige så stort rumfang 70% PEG4000 og inkuberede blandingen i 1 timer ved samme temperatur, hvorefter man gav den et varmechok på 5 mi-K. lactis strain CBS 2360 was grown in 100 ml of 30 YEPD medium (1% yeast extract, 2% peptone, 2% glucose monohydrate) containing 2.5 ml of a 6.7% (w / w) yeast. trogen base (Difco laboratories) solution to an OD610 of about 7. Cells were collected from 10 ml of this culture by centrifugation, washed with TE buffer (10 mM Tris-HCl pH 7.5; 0.1 mM EDTA) and suspended in 1 ml of TE buffer. To this was added an equal volume of 0.2 ml of lithium acetate and the mixture was incubated for 1 hour at 30 ° C in a water bath with shaking. 15 µg of pGBSCC-7 was cut at the unique SadI site in the lactase promoter, precipitated with ethanol and resuspended in 15 μΐ TE buffer. This DNA preparation was added to 100 µl of the pre-incubated cells and allowed to incubate for an additional 30 minutes, an equal volume of 70% PEG4000 was added and the mixture was incubated for 1 hour at the same temperature, then allowed to stand. a heat shock of 5 mi-
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nutter ved 42 C. Nu tilsatte man 1 ml YEPD-medium og 15 inkuberede cellerne i 1½ time under omrystning i et 0 vandbad ved 30 C. Endelig fracentrifugerede man cellerne, suspenderede dem igen i 300 yl YEPD og udspredte dem på agarplader med indhold af 15 ml YEPD agar med 300 yg/ml geneticin, som man overlagde l time 20 før anvendelse med 15 ml YEPD-agar uden G418. Kolonierne blev dyrket i 3 dage ved 30°C.nuts at 42 C. Now add 1 ml of YEPD medium and 15 incubate the cells for 1½ hours with shaking in a 0 water bath at 30 C. Finally, the cells are centrifuged, resuspended in 300 µl of YEPD and spread on agar plates containing 15 ml of YEPD agar with 300 µg / ml of geneticin which was plated 1 hour 20 before use with 15 ml of YEPD agar without G418. The colonies were grown for 3 days at 30 ° C.
(d) Analyse af transformanterne.(d) Analysis of the transformants.
Man dyrkede transformanterne og kontrolstammen 25 CBS 2360 i YEPD medium i omkring 64 timer ved 30°C. Cellerne blev fracentrifugeret, igen udsuspenderet i en fysiologisk saltopløsning til en værdi for 0D61Q på 300 og sønderrevet ved rystning med glasperler i 3 minutter på en Vortex omryster ved højeste hastighed. Man fra-30 centrifugerede celleaffaldet i 10 minutter ved 4500 o/m i en Hearaeus Christ minifuge GL. Man udtog fra super-natanterne 40 yl prøver til analyse på immunblot (se figur 15A, bane 3 og figur 15B, bane 4).The transformants and control strain 25 CBS 2360 were grown in YEPD medium for about 64 hours at 30 ° C. The cells were centrifuged, resuspended in a physiological saline solution to a value of 0D61Q of 300 and shredded by shaking with glass beads for 3 minutes on a Vortex shaker at the highest speed. Cell debris was centrifuged for 10 minutes at 4500 rpm in a Hearaeus Christ minifuge GL. 40 µl samples were taken from the supernatants for immunoblot analysis (see Figure 15A, lane 3 and Figure 15B, lane 4).
31 DK 175573 B131 DK 175573 B1
Resultaterne viser, at et protein af den ventede længde eksprimeres i K. lactis celler, transformeret med pGBSCC-7. Transformanten blev betegnet K. lactis SCC-101.The results show that a protein of the expected length is expressed in K. lactis cells transformed with pGBSCC-7. The transformant was designated K. lactis SCC-101.
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Eksempel 6Example 6
Konstruktion, transformation og ekspression af p450scc i gæren Saccharomyces cerevlsiae.Construction, transformation and expression of p450scc in the yeast Saccharomyces cerevlsiae.
10 (a) Konstruktion af ekspressionskassetten.10 (a) Construction of the expression cassette.
Til sletning af lactasepromotoren gennemskår man pGB950 (se eksempel 4(b)) med Xbal og Sall, fyldte de klæbende ender under anvendelse af Klenow DNA polymera-15 se og ligerede derefter. I det opnåede plasmid pGBSCC-8 er Xbal-stedet ødelagt, men Sall stedet er opretholdt.To delete the lactase promoter, pGB950 (see Example 4 (b)) was cut with Xbal and Sall, filled the sticky ends using Klenow DNA polymerase, and then ligated. In the plasmid pGBSCC-8 obtained, the XbaI site is destroyed, but the SalI site is maintained.
Man isolerede Sall-fragmentet fra pGB161 (se J.A. van den Berg et al., EP 96430) indeholdende den isocytochrome Cl (eye l) promotor fra S. cerevisiae og 20 fordøjede den delvis med Xhol. Man isolerede et 670 bp Xhol-Sall fragment og klonede dette i Sall-stedet på pGBSCC-8. I det udvalgte plasmid pGBSCC-9 er Sall-stedet mellem eye 1 promotoren og den 3'-ikke kodende region af lactasegenet opretholdt (figur 16) (Hindlll 25 delvis fordøjet).The Sall fragment was isolated from pGB161 (see J.A. van den Berg et al., EP 96430) containing the isocytochrome CI (eye 1) promoter from S. cerevisiae and partially digested with XhoI. A 670 bp XhoI-SalI fragment was isolated and cloned into the SalI site of pGBSCC-8. In the selected plasmid pGBSCC-9, the Sall site between the eye 1 promoter and the 3 'non-coding region of the lactase gene is maintained (Figure 16) (HindIII 25 partially digested).
Man Indsatte Sall-Hindlll fragmentet fra pGBSCC-7 med indhold af den P450SCC kodende region i pGBSCC-9 gennemskåret med Sall og HindIIi. X det opnåede plasmid pGBSCC-10 findes den P450SCC kodende region 30 nedstrøms for eye 1 promotoren (figur 17).The SalI-HindIII fragment from pGBSCC-7 containing the P450SCC coding region of pGBSCC-9 was intersected with SalI and HindIIi inserted. X the plasmid pGBSCC-10 obtained, the P450SCC coding region 30 is located downstream of the eye 1 promoter (Figure 17).
32 DK 175573 B1 (b) Transformation af S. cerevlsiae.32 DK 175573 B1 (b) Transformation of S. cerevlsiae.
Man dyrkede S. cerevlsiae stamme D273-10B {ATCC 25657) i 100 ml YEPD natten over ved 30°C, hvorefter man fortyndede (1:10000) i frisk medium og dyrkede til 5 en OD610 6. Cellerne fra 10 ml af kulturen blev fra centrifugeret og suspenderet i 5 ml TE-puffer. Igen fracentrifugerede man cellerne, suspenderede disse i 1 ml TE-puffer og tilsatte 1 ml 0,2 M lithiumacetat. Man inkuberede cellerne i 1 time under omrystning i et 10 vandbad ved 30°C. 15 yg pGBSCC-10 blev gennemskåret ved det unikke Mlul-sted i eye 1 promoteren, udfældet med ethanol og igen suspenderet i 15 yl TE, dette DNA præparat blev sat til 100 yl af de præinkuberede gærceller og inkuberet under omrystning i 30 minutter ved 15 30°C. Efter tilsætning af 115 yl af en 70% PEG4000 op løsning forlængede man inkubationen med 60 minutter uden omrystning. Derefter gav man cellerne et varmechok 0 på 5 minutter ved 42 C, man tilsatte 1 ml YEPD medium 0 og inkuberede derefter i 1½ time ved 30 C i vandbad un- 20 der omrystning. Endelig fracentrifugerede man cellerne, udsuspenderede dem i 300 yl YEPD og udspredte dem på YEPD agarplader med indhold af geneticin (300 yg/ml).S. cerevlsiae strain D273-10B (ATCC 25657) was grown in 100 ml of YEPD overnight at 30 ° C, then diluted (1: 10000) in fresh medium and grown to an OD610 6. The cells from 10 ml of the culture were from centrifuged and suspended in 5 ml TE buffer. Again, the cells were centrifuged, suspended in 1 ml TE buffer and 1 ml 0.2 M lithium acetate added. The cells were incubated for 1 hour with shaking in a water bath at 30 ° C. 15 µg pGBSCC-10 was cut at the unique Mlu I site of the eye 1 promoter, precipitated with ethanol and resuspended in 15 µl TE, this DNA preparation was added to 100 µl of the preincubated yeast cells and incubated for 30 minutes at shaking 30 ° C. After adding 115 µl of a 70% PEG4000 solution, the incubation was prolonged by 60 minutes without shaking. The cells were then subjected to a heat shock 0 of 5 minutes at 42 ° C, 1 ml of YEPD medium 0 was added and then incubated for 1½ hours at 30 ° C in a water bath without shaking. Finally, the cells were centrifuged, suspended in 300 µl YEPD and dispersed on YEPD agar plates containing geneticin (300 µg / ml).
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Kolonierne blev dyrket i 3 dage ved 30 C.The colonies were grown for 3 days at 30 ° C.
25 (c) Analyse af transformanterne.(C) Analysis of the transformants.
Man dyrkede transformanterne og kontrolstammen i YEPL-medium (1% gærekstrakt, 2% bactopepton, 3,48% K2HP04 og 2,2% af en 90% L-( + )-mælkesyreopløsning; før steriliseringen blev pH tilpasset til 6,0 under anven-30 delse af en 25% ammoniakopløsning) i 64 timer ved 30 C.Transformants and control strain were grown in YEPL medium (1% yeast extract, 2% bactopeptone, 3.48% K 2 HPO 4 and 2.2% of a 90% L- (+) lactic acid solution; before sterilization, the pH was adjusted to 6.0 using a 25% ammonia solution) for 64 hours at 30 ° C.
Den yderligere analyse blev foretaget som i eksempel 5 (d).The further analysis was performed as in Example 5 (d).
Immunblotanalysen viser ekspressionen af P45oscc i S. cerevlsiae (figur 15A, bane l).The immunoblot analysis shows the expression of P45oscc in S. cerevlsiae (Figure 15A, lane 1).
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Eksempel 7 DK 175573 B1Example 7 DK 175573 B1
Konstruktion, transformation og ekspression af præ-P450SCC-kodende DNA i gæren Kluyveromyces lactis.Construction, transformation and expression of pre-P450SCC coding DNA in the yeast Kluyveromyces lactis.
5 (a) Konstruktion af ekspressionskassetten.5 (a) Construction of the expression cassette.
Man gennemskår plasmid pGB950 (se eksempel 5(b)) med Sall og xhol og indsatte syntetisk DNA:Plasmid pGB950 (see Example 5 (b)) is cut with SalI and xhol and synthetic DNA inserted:
SAL IWILL I
10 TCGACAAAAAJOTTtXXrrCGAGGTTTCO^ITGAGATCCGCTTTGCriTAAGCXrrTGTCC10 TCGACAAAAAJOTTtXXrrCGAGGTTTCO ^ ITGAGATCCGCTTTGCriTAAGCXrrTGTCC
GTTTTTACAACCXIAGCTOCAAACGGTAACTCTAGGCGAAACCAATTCCGAACAGGGTTTTTACAACCXIAGCTOCAAACGGTAACTCTAGGCGAAACCAATTCCGAACAGG
ACCAATCnTGTTCX^CTGTTCXn’GAAGGTTGGGGTCACCACAGAGTTGGTACTGGTGAAGGACCAATCnTGTTCX ^ CTGTTCXn'GAAGGTTGGGGTCACCACAGAGTTGGTACTGGTGAAGG
TGGTTAGAAC^GGTGACAACCACTTCX^AACCCCAGTGGTGTCTCAACCATGACCACTTCCTGGTTAGAAC ^ ^ GGTGACAACCACTTCX AACCCCAGTGGTGTCTCAACCATGACCACTTCC
STD 1 XHO 1STD 1 XHO 1
λ 5 TGCTGGTATCAGTACTAAGACTCCTAGGCCTATCXSATrCλ 5 TGCTGGTATCAGTACTAAGACTCCTAGGCCTATCXSATrC
ACGACCATAGTCATGATXCTGAGGATCCGGATAGCTAAGAGCTACGACCATAGTCATGATXCTGAGGATCCGGATAGCTAAGAGCT
til opnåelse af plasmidet pGBSCC-11 (figur 18). På lignende måde, som beskrevet i eksempel 5(b) indsatte man den P450SCC kodende region fra pGBSCC-2 i pGBSC-11, der 20 var gennemskåret med Stul. Plasmidet, der indeholdt fragmentet i korrekt orientering, blev kaldt pGBSCC-12 (figur 18).to obtain the plasmid pGBSCC-11 (Figure 18). Similarly, as described in Example 5 (b), the P450SCC coding region from pGBSCC-2 was inserted into pGBSC-11, which was cut with Stul. The plasmid containing the fragment in proper orientation was called pGBSCC-12 (Figure 18).
(b) Transformation af K. lactis og analyse af transfor- 25 manterne.(b) Transformation of K. lactis and analysis of the transformants.
Man udførte transformation af K. lactis med pGBSCC-12 som beskrevet i eksempel 5(c). Transformanterne blev analyseret som beskrevet i eksempel 5(d).Transformation of K. lactis with pGBSCC-12 was performed as described in Example 5 (c). The transformants were analyzed as described in Example 5 (d).
Analysen viste produktion af P450SCC i K. lactis (figur 30 15B, bane 3).The analysis showed production of P450SCC in K. lactis (Figure 30 15B, lane 3).
DK 175573 B1 34DK 175573 B1 34
Eksempel 8Example 8
Konstruktion, transformation og ekspression af præ- P45oSCC-kodende DNA i gæren Saccharomyces cerevislae.Construction, transformation and expression of pre-P45oSCC coding DNA in the yeast Saccharomyces cerevislae.
5 (a) Konstruktion af ekspressionskassetten.5 (a) Construction of the expression cassette.
Man indsatte Sall-Hindlll (Hindlll delvis fordøjet) fragmentet fra pGBSCC-12 med indhold af den præ-P45oSCC-k°dende region i pGBSCC-9, der var gennemskåret 10 med Sall og Hindlll. Det herved opnåede plasmid blev benævnt pGBSCC-13 (figur 19).The SalI-HindIII (HindIII partially digested) fragment was inserted from pGBSCC-12 containing the pre-P45oSCC boiling region of pGBSCC-9 which was cut with SalI and HindIII. The resulting plasmid was named pGBSCC-13 (Figure 19).
(b) Transformation af S. cerevislae og analyse af transformanterne.(b) Transformation of S. cerevislae and analysis of the transformants.
15 Man transformerede S. cerevisiae stamme D273-10B15 S. cerevisiae strain D273-10B was transformed
med pGBSCC-13 som beskrevet i eksempel 6(b). Transformanterne blev analyseret som beskrevet i eksempel 5(c). Resultatet, der er vist i figur 15C (bane 3), demonstrerer eksprimering af P450SCC i S. cerevisiae. En 20 transformant SCC-105 blev yderligere analyseret for in vitro aktivitet af P45qSCC (se eksempel 12).with pGBSCC-13 as described in Example 6 (b). The transformants were analyzed as described in Example 5 (c). The result shown in Figure 15C (lane 3) demonstrates expression of P450SCC in S. cerevisiae. A 20 transformant SCC-105 was further analyzed for in vitro activity of P45qSCC (see Example 12).
Eksempel 9 25 Konstruktion, transformation og ekspression i Kluyvero-myces lactis af P450SCC sekvenser sammensmeltet med præregionen af cytochromoxidase VI fra Saccharomyces cerevislae. 1 (a) Konstruktion af ekspressionskassetten.Example 9 Construction, transformation and expression in Kluyveromyces lactis of P450SCC sequences fused with the pre-region of Saccharomyces cerevislae cytochrome oxidase VI. 1 (a) Construction of the expression cassette.
Man gennemskår plasmid pGB950 (se eksempel 6(b)) med Sall og Xhol og indsatte syntetisk DNA: DK 175573 B1 35Plasmid pGB950 (see Example 6 (b)) with Sall and Xhol is cut and synthetic DNA inserted: DK 175573 B1 35
SAL IWILL I
tcgacaaaaatgttgtctcgagctatcttcagaaacccagttatcaacagaactttgtttcgacaaaaatgttgtctcgagctatcttcagaaacccagttatcaacagaactttgtt
GTTTTTACAACAGAGCTCGATAGAAGTCTTrGGGTCAATAGTTGTCTTGAAACAAGTTTTTACAACAGAGCTCGATAGAAGTCTTrGGGTCAATAGTTGTCTTGAAACAA
GAGAGCTAGACCAGGTGCTTACCACGCTACTAGATTGACTAAGAACACTTTCATCCAATCGAGAGCTAGACCAGGTGCTTACCACGCTACTAGATTGACTAAGAACACTTTCATCCAATC
CTCTC^TCTCGTCCACGAATGGTGCGATGATCTAACTGATTCTTGTGAAAGTAGGTTAGCTCTC ^ TCTCGTCCACGAATGGTGCGATGATCTAACTGATTCTTGTGAAAGTAGGTTAG
5 STU 1 XHO 15 STU 1 XHO 1
CAGAAAGTACATCAGTACTAAGACTCCTAGGCCTATCGATTC GTCTTTCATGTAGTCATGATTCTGAGGATCCGGATAGCTAAGAGCTCAGAAAGTACATCAGTACTAAGACTCCTAGGCCTATCGATTC GTCTTTCATGTAGTCATGATTCTGAGGATCCGGATAGCTAAGAGCT
til opnåelse af plasmidet pGBSCC-14.to obtain the plasmid pGBSCC-14.
Aminosyresekvensen fra cytochromoxidase vi (COX 10 VI) præsekvensen blev taget fra en artikel af Wright et al. (J. Biol. Chem., 259, 15401-15407, 1984). Man kontrollerede det syntetiske DNA under anvendelse af foretrukne gærkodoner. Den P450SCC kodende region fra pGBSCC-2 blev indsat i pGBSCC-14 gennemskåret med Stul *·* på lignende måde som beskrevet i eksempel 5(b). Det plasmid, der indeholdt den P450SCC kodende sekvens i ramme med COX VI præsekvensen, blev benævnt pGBSCC-15 (figur 20). 1 (b) Transformation af K. lactis og analyse af transformanterne .The amino acid sequence of the cytochrome oxidase vi (COX 10 VI) sequence was taken from an article by Wright et al. (J. Biol. Chem., 259, 15401-15407, 1984). Synthetic DNA was checked using preferred yeast codons. The p450SCC coding region from pGBSCC-2 was inserted into pGBSCC-14 cut with Stul * · * in a similar manner as described in Example 5 (b). The plasmid containing the P450SCC coding sequence in the frame with the COX VI precursor was named pGBSCC-15 (Figure 20). 1 (b) Transformation of K. lactis and analysis of the transformants.
Man udførte transformation af K. lactis med pGBSCC-15 som beskrevet i eksempel 5(c). Transformanterne blev analyseret som beskrevet i eksempel 5(d).Transformation of K. lactis with pGBSCC-15 was performed as described in Example 5 (c). The transformants were analyzed as described in Example 5 (d).
. 25 Resultatet (figur 15B, bane 2) viser, at P450SCC bliver eksprimeret.. The result (Figure 15B, lane 2) shows that P450SCC is expressed.
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Eksempel 10 DK 175573 B1Example 10 DK 175573 B1
Konstruktion, transformation og ekspression i Saccharo-myces cerevisiae af P450SCC sekvenser sammensmeltet med 5 præregionen fra cytochromoxidase VI fra Saccharomyces cerevisiae.Construction, transformation and expression in Saccharomyces cerevisiae of P450SCC sequences fused with the pre-region of cytochrome oxidase VI of Saccharomyces cerevisiae.
(a) Konstruktion af ekspressionskassetten.(a) Construction of the expression cassette.
Man indsatte Sall-Hindm (Hlndm delvis fordø-10 jet) fragmentet fra pGBSCC-15 indeholdende den kodende region for P45QSCC sammensmeltet med COX VII præsekvensen i pGBSCC-9, der var gennemskåret med Sall og Hindlll. Det herved opnåede plasmid blev benævnt pGBSCC-16 (figur 21).The SalI-Hindm (HIndm partially digested) fragment was inserted from the pGBSCC-15 containing the coding region of the P45QSCC fused to the COX VII precursor of pGBSCC-9, which was cut with SalI and HindIII. The resulting plasmid was named pGBSCC-16 (Figure 21).
15 (b) Transformation af S. cerevisiae og analyse af transformanterne.(B) Transformation of S. cerevisiae and analysis of the transformants.
Man transformerede S. cerevisiae stamme D273-10B med pGBSCC-16 som beskrevet i eksempel 6(b). Transfor-20 manterne blev analyseret som beskrevet i eksempel 6(c). Resultatet, der vises i figur 15C (bane 2), viser eks-primering af P45QSCC i S. cerevisiae.S. cerevisiae strain D273-10B was transformed with pGBSCC-16 as described in Example 6 (b). The transformants were analyzed as described in Example 6 (c). The result, shown in Figure 15C (lane 2), shows the priming of P45QSCC in S. cerevisiae.
Eksempel 11 25Example 11 25
In vivo aktivitet af P450SCC i Bacillus licheniformis SCC-201.In vivo activity of P450SCC in Bacillus licheniformis SCC-201.
Man opnåede B. licheniformis SCC-201 som beskre-30 vet i eksempel 3. Organismen blev inokuleret i 100 ml medium A. Medium A bestod af:B. licheniformis SCC-201 was obtained as described in Example 3. The organism was inoculated into 100 ml of medium A. Medium A consisted of:
DK 175573 B1 IDK 175573 B1 I
3737
Calciumchlorid hexahydrat 1 gCalcium chloride hexahydrate 1 g
Ammoniumsulfat 5 g jAmmonium sulfate 5 g j
Magnesiumchlorid hexahydrat 2,25 g jMagnesium chloride hexahydrate 2.25 g j
Mangansulfat, tetrahydrat 20 mg 5 Cobaltchlorid, hexahydrat 1 mg jManganese sulphate, tetrahydrate 20 mg 5 Cobalt chloride, hexahydrate 1 mg j
Citronsyre, monohydrat 1,65 gCitric acid, monohydrate 1.65 g
Destilleret vand 600 mlDistilled water 600 ml
Lageropløsning af sporelementer 1 mlStock solution of trace elements 1 ml
Antiskum (SAG 5693) 0,5 mg ! 10Anti-foam (SAG 5693) 0.5 mg! 10
Lageropløsningen af sporelementer indeholdt pr. 1 de stilleret vand:The storage solution of trace elements contained per. In the still water:
CuS04,5H20 0,75 g H^BOj 0,60 g 15 Kl 0,30 gCuSO4.5H2 O 0.75 g H 2 BO 2 0.60 g Kl 0.30 g
FeS04(NH4)2S04,2H20 27 gFeSO4 (NH4) 2SO4.2H2O 27 g
ZnS04,7H20 5 gZnSO4.7H2O 5 g
Citronsyre, H20 15 gCitric acid, H 2 O 15 g
MnS04,H20 0,45 g 20 Na2Mo04,H20 0,60 g H2S04 (96%) 3 mlMnSO 4, H 2 O 0.45 g Na 2 MoO 4, H 2 O 0.60 g H 2 SO 4 (96%) 3 ml
Efter sterilisering og afkøling til 30°C satte man til fuldstændiggørelse af mediet hertil 60 g malto- 25 se, monohydrat opløst i 200 ml destilleret vand (steriliseret 20 minutter ved 120 C), 200 ml 1M kali- umphosphatpuffer (pH 6,8; steriliseret i 20 minutter 0 ved 120 C), 1,7 g gærnitrogenbase (Difco) opløst i 100 ml destilleret vand (steriliseret ved membranfiltre-30 ring).After sterilization and cooling to 30 ° C, 60 g of maltose monohydrate dissolved in 200 ml of distilled water (sterilized 20 minutes at 120 ° C), 200 ml of 1M potassium phosphate buffer (pH 6.8) were added to complete the medium. sterilized for 20 minutes 0 at 120 ° C, 1.7 g of yeast nitrogen base (Difco) dissolved in 100 ml of distilled water (sterilized by membrane filtration).
Kulturen blev dyrket i 64 timer ved 37 C, og derefter benyttede man 2 ml af denne kultur til at inoku-lere 100 ml medium A indeholdende 10 mg cholesterol.The culture was grown for 64 hours at 37 ° C and then 2 ml of this culture was used to inoculate 100 ml of medium A containing 10 mg of cholesterol.
38 DK 175573 B138 DK 175573 B1
Man tilsatte cholesterol som en opløsning med indhold af cholesterol 10 mg; Tergitol/ethanol (1:1 v/v), 0,75 ml og Tween 80, 20 μΐ. Kulturen blev dyrket i 48 timer ved 37°C, hvorefter man ekstraherede den med 100 ml 5 dichlormethan. Blandingen blev adskilt ved centrifugering, og man benyttede det organiske lag. Man gentog ekstraktionsproceduren to gange og samlede de 3 x 100 ml dichlormethanfraktioner. Dichlormethanen blev bortfordampet ved vakuumdestillation og man analyserede den 10 tørrede ekstrakt (ca. 450 mg) for pregnenolon under anvendelse af en gaschromatografi-masse-spektrometer kombination.Cholesterol was added as a solution containing 10 mg of cholesterol; Tergitol / ethanol (1: 1 v / v), 0.75 ml and Tween 80, 20 μΐ. The culture was grown for 48 hours at 37 ° C, then extracted with 100 ml of 5 dichloromethane. The mixture was separated by centrifugation and the organic layer was used. The extraction procedure was repeated twice and the 3 x 100 ml dichloromethane fractions were combined. The dichloromethane was evaporated by vacuum distillation and the 10 dried extract (about 450 mg) of pregnenolone was analyzed using a gas chromatography-mass spectrometer combination.
GC-MS analyse.GC-MS analysis.
15 Fra den tørrede ekstrakt udtog man en bestemt mængde og silylerede denne ved at tilsætte en blanding af pyridin-bis(trimethylsilyl)trifluoracetamid og trimethylchlorsilan. Den silylerede prøve blev analyseret ved en GL-MS-DS kombination {Carlo Erba MEGA 20 5160-Finnigan MAT 311A-Kratos DS 90) i den udvalgt ion modus. Man udførte gaschromatografien under følgende 0 betingelser: injektion med bevægelig nål ved 300 C: kolonne M.cpsil29 0,25 indre diameter df 0,2 pm drevet ved 300 C isothermt; direkte indførsel i MS-kilde.A certain amount was extracted from the dried extract and silylated by adding a mixture of pyridine-bis (trimethylsilyl) trifluoroacetamide and trimethylchlorosilane. The silylated sample was analyzed by a GL-MS-DS combination (Carlo Erba MEGA 20 5160-Finnigan MAT 311A-Kratos DS 90) in the selected ion mode. Gas chromatography was performed under the following 0 conditions: injection needle with movable needle at 300 ° C: column M.cpsil29 0.25 inner diameter df 0.2 µm driven at 300 ° C isothermal; direct import into MS source.
25 Man analyserede prøverne ved at følge ionerne m/z 298 fra pregnenolon ved en opløsning på 800. Fra målingerne var det tydeligt, at man i tilfælde af værtsstammen B. llchenlformis T5 ikke kunne påvise noget pregnenolon (påvisningsgrænse 1 picogram), hvorimod 30 man let i tilfælde af B. licheniformis SCC-201 kunne følge en produktion af pregnenolon.The samples were analyzed by following the ions m / z 298 from pregnenolone at a resolution of 800. From the measurements it was evident that in the case of the host strain B. llchenlformis T5 no pregnenolone (detection limit 1 picogram) was detected, whereas 30 easily in the case of B. licheniformis SCC-201 could follow a production of pregnenolone.
3939
Eksempel 12 DK 175573 B1Example 12 DK 175573 B1
In vitro aktivitet af P450SCC opnået fra Saccharomyces cerevisiae SCC-105.In vitro activity of P450SCC obtained from Saccharomyces cerevisiae SCC-105.
55
Man inokulerede S. Cerevisiae SCC-105 opnået som beskrevet i eksempel 8 i 100 ml medium B. Medium B indeholdt pr. 1 destilleret vand: Gærekstrakt 10 g 10 Bactopepton (Oxoid) 20 g Mælkesyre (90%) 20 gS. Cerevisiae SCC-105 obtained as described in Example 8 was inoculated into 100 ml of medium B. Medium B contained per ml. 1 distilled water: yeast extract 10 g 10 Bactopeptone (Oxoid) 20 g Lactic acid (90%) 20 g
Dikaliumphosphat 35 g pH = 5,5 (tilpasset med 25% w/w ammoniak) 15 Denne kultur blev dyrket i 48 timer ved 30*C og blev derefter benyttet til at inokulere en fermenteringsbeholder med indhold af medium C. Medium C bestod af: Gærekstrakt 100 g 20 Bactopepton (Oxoid) 200 g Mælkesyre (90%) 220 mlDicalium Phosphate 35 g pH = 5.5 (adjusted with 25% w / w ammonia) This culture was grown for 48 hours at 30 ° C and was then used to inoculate a fermentation vessel containing medium C. Medium C consisted of: Yeast extract 100 g Bactopeptone (Oxoid) 200 g Lactic acid (90%) 220 ml
Dikaliumhydrogenphosphat 35 gDicalium hydrogen phosphate 35 g
Destilleret vand 7800 ml 25 pH blev tilpasset til en værdi på 6,0 med 25% ammoniak, og man steriliserede fermenteringsbeholderen og mediet (1 time, 120°C).Distilled water 7800 ml of pH was adjusted to a value of 6.0 with 25% ammonia and the fermentation vessel and medium sterilized (1 hour, 120 ° C).
Efter afkøling steriliserede man 2,4 g geniticin opløst i 25 ml destilleret vand ved membranfiltrering 30 og satte dette til mediet. Den inokulerede blanding blev dyrket under omrøring (800 o/m) i reaktionsbehol-0 deren ved 30 C, idet man lod steril luft passere dyrkningsurten med en mængde på 300 1/t og automatisk holdt 40 DK 175573 B1 pH ved 6,0 ved hjælp af 4N H2S04 og 5% NH4OH (5% NH^OH i destilleret vand; steriliseret ved membranfiltrering) . Efter 48 timer påbegyndte man en tilførsel af mælkesyre (90%, steriliseret ved membranfiltrering) med 5 en hastighed på 20 g/t. Fermenteringen fortsatte derefter i 40 timer, hvorefter man fracentrifugerede cellerne (4000 g, 15 minutter).After cooling, 2.4 g of geniticin dissolved in 25 ml of distilled water were sterilized by membrane filtration 30 and added to the medium. The inoculated mixture was grown with stirring (800 rpm) in the reaction vessel at 30 ° C, passing sterile air through the culture herb at 300 l / h and automatically maintaining pH at 6.0 at 6.0 ° C. 4N H2 SO4 and 5% NH 4 OH (5% NH 4 OH in distilled water; sterilized by membrane filtration). After 48 hours, a lactic acid feed (90%, sterilized by membrane filtration) was started at a rate of 20 g / h. The fermentation was then continued for 40 hours, after which the cells were centrifuged (4000 g, 15 minutes).
Centrifugebundfaldet blev vasket med 0,9% (w/w)The centrifuge precipitate was washed with 0.9% (w / w)
Nacl fulgt af centrifugering (4000 g, 15 minutter); man 10 vaskede centrifugebundfaldet med phosphatpuffer (50 mM, pH = 7,0) og fracentrifugerede igen cellerne (4000 g,Nacl followed by centrifugation (4000 g, 15 minutes); The centrifuge precipitate was washed with phosphate buffer (50 mM, pH = 7.0) and the cells again centrifuged (4000 g,
15 minutter). Centrifugebundfaldet blev optaget i phosphatpuffer (50 mM, pH = 7,0) til opnåelse af en suspension med indhold af 0,5 g våd vægt/ml. Denne su-15 spension blev behandlet i en Dyno-mill (Willy A. Bacho-fen Maschinenfabrik, Basel, CH). Ikke sønderdelte celler blev fracentrifugeret (4000 g, 15 minutter). Den I15 minutes). The centrifuge precipitate was taken up in phosphate buffer (50 mM, pH = 7.0) to obtain a suspension containing 0.5 g wet weight / ml. This suspension was processed in a Dyno mill (Willy A. Bacho-fen Maschinenfabrik, Basel, CH). Non-disintegrated cells were centrifuged (4000 g, 15 minutes). The I
cellefrie ekstrakt (2250 ml, 15-20 mg protein/ml) blev o lagret ved -20 C.cell-free extract (2250 ml, 15-20 mg protein / ml) was stored at -20 ° C.
20 Man grovrensede P450SCC ved følgende fremgangs- j måde. Fra 50 ml optøet cellefri ekstrakt udfældede man en rå membranfraktion ved ultracentrifugering (125000 g, 30 minutter) og suspenderede igen i 50 ml 75 mm ka- liumphosphatopløsning (pH 7,0) med indhold af 1% 25 natriumcholat. Denne dispersion blev holdt under 0 blid omrøring i 1 time ved 0 C og derefter centrifugeret (125000 g, 60 minutter). Til den således opnåede supernatant med indhold af solubiliseret membranproteiner satte man (NH4)2S04 (30% w/v), idet man holdt pH 30 ved 7,0 ved at tilsætte små mængder af en 6N NH40H opløsning. Suspensionen blev holdt under omrøring i 20 minutter ved 0°C, hvorefter man indsamlede en fraktion af udfældede proteiner ved centrifugering (15000 g, 10 i 41 DK 175573 B1 minutter). Centrifugebundfaldet blev igen suspenderet til et rumfang på 2,5 ml med 100 mM kaliumphosphatpuf-fer (pH 7,0) med indhold af 0,1 mM dithiothreitol og 0,1 mM EDTA. Denne suspension blev elueret over en gel-5 filtreringskolonne (PD10, Pharmacia) til opnåelse af 3.5 ml af en af saltet proteinfraktion (6 mg/ml), der blev analyseret for P450SCC aktivitet.The P450SCC was purified by the following procedure. From 50 ml of thawed cell-free extract, a crude membrane fraction was precipitated by ultracentrifugation (125000 g, 30 minutes) and resuspended in 50 ml of 75 mm potassium phosphate solution (pH 7.0) containing 1% sodium cholate. This dispersion was kept under gentle stirring for 1 hour at 0 ° C and then centrifuged (125000 g, 60 minutes). To the supernatant thus obtained containing solubilized membrane proteins was added (NH 4) 2 SO 4 (30% w / v), maintaining pH 30 at 7.0 by adding small amounts of a 6N NH 4 OH solution. The suspension was kept under stirring for 20 minutes at 0 ° C, after which a fraction of precipitated proteins was collected by centrifugation (15000 g, 10 for 41 minutes). The centrifuge precipitate was again suspended to a volume of 2.5 ml with 100 mM potassium phosphate buffer (pH 7.0) containing 0.1 mM dithiothreitol and 0.1 mM EDTA. This suspension was eluted over a gel-5 filtration column (PD10, Pharmacia) to obtain 3.5 ml of a salt protein fraction (6 mg / ml) assayed for P450SCC activity.
P45qSCC aktiviteten blev bestemt ved et assay, der i det væsentlige er baseret på en fremgangsmåde af 10 Doering (Methods Enzymology, 15, 591-596, 1969). Assay-blandingen bestod af følgende opløsninger:The P45qSCC activity was determined by an assay based essentially on a method of Doering (Methods Enzymology, 15, 591-596, 1969). The assay mixture consisted of the following solutions:
Opløsning A (naturlig P45qSCC elektrondonerende system): en 10 mM kaliumphosphatpuffer (pH 7,0), med indhold af 3 mM EDTA, 3 mM phenylmethylsulfonylfluorid 15 (PMSF), 20 pM adrenodoxin og 1 pM adrenodoxinreduktase (elektronbærere; begge oprenset fra bovin binyrebark), 1 mM NADPH (elektrondonor) og 15 mM glucose-6-phosphat og 8 enheder/ml glucose-6-phosphat-dehydrogenase (NADPH regenererende system).Solution A (natural P45qSCC electron donating system): a 10 mM potassium phosphate buffer (pH 7.0), containing 3 mM EDTA, 3 mM phenylmethylsulfonyl fluoride 15 (PMSF), 20 µM adrenodoxin, and 1 µM adrenodoxin reductase (electron carrier; ), 1 mM NADPH (electron donor) and 15 mM glucose-6-phosphate and 8 units / ml glucose-6-phosphate dehydrogenase (NADPH regenerating system).
20 Opløsning B (substrat): en micelleopløsning af 37.5 pM cholesterol (dobbelt radiomærket med [26,27-14C] cholesterol (40 Ci/mol) og [7 a-3HJ cholesterol (400 Ci/mol)) i 10% (v/v) Tergitol NP40/ethanol (1:1, v/v).Solution B (substrate): a micelle solution of 37.5 µM cholesterol (double radiolabelled with [26.27-14C] cholesterol (40 Ci / mol) and [7 α-3HJ cholesterol (400 Ci / mol)) in 10% (v / v) Tergitol NP40 / ethanol (1: 1, v / v).
25 Man påbegyndte assayet ved at blande 75 pi af opløsning A med 50 pi af opløsning B og 125 pi af den groft oprensede P450SCC fraktion (eller puffer som reference). Blandingen blev holdt under blid omrøring véd 30°C. Man udtog prøver på 50 pi efter 0, 30 og 180 ΟΛ minutter og fortyndede disse med 100 pi vand. Til den fortyndede prøve blev sat 100 pi methanol og 150 pi chloroform. Efter ekstraktion og centrifugering (5000 g, 2 minutter) indsamlede og tørrede man chloroform- 42 DK 175573 B1 laget. Den tørre remanens blev opløst i 50 μΐ acetone, der indeholdt 0,5 mg af en steroidblanding (cholesterol, pregnenolon og progesteron (1:1:1, w/w/w)), hvorefter man tilsatte 110 μΐ koncentreret myresyre og op- 0 5 varmede suspensionen i 15 minutter til 120 C. Herefter bestemte man forholdet 14C/3H ved dobbeltmærket væskescintillationstælling. Dette forhold er et direkte mål for sidekædespaltningsreaktionen, idet den 14C-mær-kede sidekæde bortfordampes fra blandingen som isoca-10 prylsyre under opvarmningen.The assay was started by mixing 75 µl of solution A with 50 µl of solution B and 125 µl of the coarsely purified P450SCC fraction (or buffer as a reference). The mixture was kept under gentle stirring at 30 ° C. Samples of 50 µl were taken after 0, 30 and 180 ΟΛ minutes and diluted with 100 µl water. To the diluted sample was added 100 µl methanol and 150 µl chloroform. After extraction and centrifugation (5000 g, 2 minutes), the chloroform layer was collected and dried. The dry residue was dissolved in 50 μΐ acetone containing 0.5 mg of a steroid mixture (cholesterol, pregnenolone and progesterone (1: 1: 1, w / w / w)), then 110 μΐ concentrated formic acid and 0 5 heated the suspension for 15 minutes to 120 C. Then the ratio 14C / 3H was determined by double-labeled liquid scintillation counting. This ratio is a direct measure of the side-chain cleavage reaction, with the 14C-labeled side chain evaporating from the mixture as isocoprilic acid during heating.
Under anvendelse af dette assay fandt man, at den P450SCC fraktion, der var groft oprenset fra S. cerevisiae SCC-105, viste sidekædespaltende aktivitet.Using this assay, the P450SCC fraction roughly purified from S. cerevisiae SCC-105 was found to exhibit side-chain cleavage activity.
Under 3 timers inkubering var 45% af cholesterolen ble-15 vet omdannet. Man kunne ved hjælp af tyndtlagschromato-grafi identificere reaktionsproduktet som pregnenolon.During 3 hours of incubation, 45% of the cholesterol had been converted. One could identify the reaction product as pregnenolone by thin layer chromatography.
Eksempel 13 20 Molekylær kloning af en fuld længde cDNA, der koder for bovint cytochrom p4so steroid l7a-hydroxylase (P45017a)·Example 13 Molecular cloning of a full length cDNA encoding bovine cytochrome p450 steroid 17a-hydroxylase (P45017a) ·
Man udvalgte ca. 106 pfu'er af det bovine biny-25 rebark cDNA bibliotek beskrevet i eksempel 1 for p45017acDNA sekvenser, idet man gennemsøgte med to 32P endemærkede syntetiske oligomere, der var specifikke for P45017acDNA. Oligomer 17α-1 (5’-AGT GGC CAC TTT GGG ACG CCC AGA GAA TTC-3') og oligomer 17a-2 (5'-GAG GCT 30 CCT GGG GTA CTT GGC ACC AGA GTG CTT GGT-3') er komplementære til den bovine P45017acDNA sekvens, som beskrevet af Zuber et al. (J. Biol. Chem., 261, 2475-2482, 1986) fra henholdsvis position 349 til 320 og 139 til 104.They selected approx. 106 pfu's of the bovine biny-25 rebark cDNA library described in Example 1 for p45017acDNA sequences, were searched with two 32P end-labeled synthetic oligomers specific for P45017acDNA. Oligomer 17α-1 (5′-AGT GGC CAC TTT GGG ACG CCC AGA GAA TTC-3 ′) and oligomer 17a-2 (5′-GAG GCT 30 CCT GGG GTA CTT GGC ACC AGA GTG CTT GGT-3 ′) are complementary to the bovine P45017acDNA sequence, as described by Zuber et al. (J. Biol. Chem., 261, 2475-2482, 1986) from positions 349 to 320 and 139 to 104, respectively.
DK 175573 B1 43DK 175573 B1 43
Udvælgelse med oligomer 17α-1 gav omtrent 1500 hybridiserende pfu'er. Man udvalgte adskillige hybri-diserende pfu'er, rensede disse og scalede op til præparativ fag DNA isolering. Man underklonede EcoRI 5 indsætningsstykkerne fra de rekombinante λ-gtll DNA*er i EcoRI stedet på pTZ18R. En klon, pGB17a-l, blev yderligere karakteriseret ved restriktionsendonucleasekort-lægning og DNA sekvensopdeling. Plasmid pGB17a-l indeholder et 1,4 kb EcoRI ind sætnings s tykke, der er kom-10 plementært til 3'-delen af P45017a fra EcoRI stedet ved position 320 til polyadenyleringsstedet ved position 1721 som beskrevet af Zuber et al.Selection with oligomer 17α-1 yielded approximately 1500 hybridizing pfu's. Several hybridizing PFUs were selected, purified, and scaled up for preparative phage DNA isolation. The EcoRI 5 inserts were cloned from the recombinant λ-gtll DNA * into the EcoRI site of pTZ18R. A clone, pGB17a-1, was further characterized by restriction endonuclease mapping and DNA sequencing. Plasmid pGB17a-1 contains a 1.4 kb EcoRI insert thick complementary to the 3 'portion of P45017a from the EcoRI site at position 320 to the polyadenylation site at position 1721 as described by Zuber et al.
Et kort over pGB17a-l ses på figur 22A.A map of pGB17a-l is shown in Figure 22A.
Man opnåede otte hybridiserende pfu'er ved at 15 gennemsøge cDNA biblioteket med oligomer 17ct-2. Efter rensning, opformering af rekombinante fager og isolering af rekombinant λ-gtll DNA'er underklonede man EcoRI indsætningsstykker i EcoRI stedet på pTZ18R. Disse EcoRI Indsætningsstykker varierer i længde fra 270 20 kp til 1,5 kbp. Man undersøgte kun en klon yderligere, nemlig pGB17a-2, der indeholdt et 345 bp EcoRI-fragment, ved nucleotidsekvensopdeling og sammenlignede med den offentliggjorte P450l7acDNA sekvens ifølge Zuber øt al. Som vist på figur 22B begynder P45017acDNA 25 sekvensen i pGB17a-2 72 bp opstrøms for det antagne AUG startkodon ved position 47 og viser fuldstændig homologt med 5'-delen af P45017acDNA indtil EcoRI stedet ved position 320 som beskrevet af Zuber et al.Eight hybridizing pfu's were obtained by scanning the cDNA library of oligomer 17ct-2. After purification, amplification of recombinant phages and isolation of recombinant λ-gtll DNAs, EcoRI inserts were cloned into the EcoRI site of pTZ18R. These EcoRI inserts range in length from 270 20 kp to 1.5 kbp. Only one clone, namely pGB17a-2, containing a 345 bp EcoRI fragment, was investigated by nucleotide sequence breakdown and compared with the published P45017acDNA sequence of Zuber et al. As shown in Figure 22B, the P45017acDNA 25 begins the sequence of pGB17a-2 72 bp upstream of the assumed AUG start codon at position 47 and shows completely homologous to the 5 'portion of P45017acDNA until the EcoRI site at position 320 as described by Zuber et al.
Man konstruerede en bovin P45q17ocDNA i fuld 30 længde ved molekylær kloning i E. coll JM101 af en ligationsblanding, der indeholdt en delvis EcoRI fordøjelsesprodukt af pGB17a-l og det 345 bp lange EcoRI fragment fra pGB17ct-2. Den opnåede klon pGB17a-3 inde- 44 DK 175573 B1 holder en fuld længde bovin P45017acDNA °9 vises på figur 22 C.A full-length bovine P45q17ocDNA was constructed by molecular cloning in E.coll JM101 of a ligation mixture containing a partial EcoRI digest product of pGB17a-1 and the 345 bp EcoRI fragment of pGB17ct-2. The clone pGB17a-3 obtained contains a full length bovine P45017acDNA ° 9 is shown in Figure 22C.
Eksempel 14 5Example 14 5
Konstruktion og transformation af en fuld længde p45017acDNA klon i gæren Kluyveromyces lactls.Construction and transformation of a full length p45017acDNA clone into the yeast Kluyveromyces lactls.
(a) Konstruktion af ekspressionsvektoren.(a) Construction of the expression vector.
10 Til opnåelse af en passende ekspressionsvektor i gærværter for bovin P45017a muterede man pGB17a-3 ved positionsrettet mutagenese som beskrevet af Zoller og Smith, (Methods in Enzymol., 100, 468-500, 1983); Zoller og Smith, (Methods in Enzymol., 154, 329-350, 1987) 15 og Kramer og Fritz, (Methods in Enzymol., 154, 350-367, 1987). Plasmider og stammer til in vitro mutageneseek-sperimenter blev opnået fra Pharmacia Inc.To obtain a suitable expression vector in yeast hosts for bovine P45017a, pGB17a-3 was mutated by position-directed mutagenesis as described by Zoller and Smith, (Methods in Enzymol., 100, 468-500, 1983); Zoller and Smith, (Methods in Enzymol., 154, 329-350, 1987) and Kramer and Fritz, (Methods in Enzymol., 154, 350-367, 1987). Plasmids and strains for in vitro mutagenesis experiments were obtained from Pharmacia Inc.
Som vist på figur 23 ændrede man 9 bp netop opstrøms for ATG initieringskodonet til opnåelse af et 20 Sall restriktionssted og optimale gærtranslationssignaler under anvendelse af den syntetiske oligomer 17α-3.As shown in Figure 23, 9 bp was modified just upstream of the ATG initiation codon to obtain a 20 SalI restriction site and optimal yeast translation signals using the synthetic oligomer 17α-3.
SAL 1 5 ’ - TCTTTGTCCTGACTGCTGCCAGTCGACAAAAATGTGGCTGCTC- 3 * 1 2 3 4 5 6SAL 1 5 '- TCTTTGTCCTGACTGCTGCCAGTCGACAAAAATGTGGCTGCTC- 3 * 1 2 3 4 5 6
Det opnåede plasmid pGB17a-4 blev fordøjet med 2The resulting plasmid pGB17a-4 was digested with 2
Sall og Smal; DNA fragmentet indeholdende P4gQl7acDNA i 3 fuld længde blev fraskilt ved gelelektroforese, isole 4 ret og overført ved molekylær kloning i E. coli JM101 5 til vektoren pGB950 (se eksempel 5), der først blev 6 fordøjet med Xhol, fik klæbende ender fyldt med Klenow DNA polymerase og derefter blev fordøjet med Sall til opnåelse af plasmidet pGB17a-5 som afbildet på figur 24.Sall and Smal; The DNA fragment containing P4gQ17acDNA in 3 full length was separated by gel electrophoresis, isolate 4, and transferred by molecular cloning in E. coli JM101 5 to the vector pGB950 (see Example 5) first digested with XhoI got adhesive ends filled with Klenow DNA polymerase and then digested with SalI to obtain the plasmid pGB17a-5 as depicted in Figure 24.
45 DK 175573 B1 (b) Transformation af K. lactis.45 DK 175573 B1 (b) Transformation of K. lactis.
Man benyttede 15 pg pGB17a-5 gennemskåret ved det unikke SacII sted i lactasepromotoren til at transformere K. lactis stamme CBS 2360 som beskrevet i 5 eksempel 5. Man analyserede transformanterne for tilstedeværelse af integrerede pGB17a-5 sekvenser i værts-genomet ved Southern analyse. Én transformant, 17ct-10l, der indeholdt mindst tre kopier af pGB17a-5 i det geno-miske vært DNA, blev yderligere analyseret for in vivo 10 aktivitet af P45Q17a (se eksempel 16).15 µg of pGB17a-5 cut at the unique SacII site of the lactase promoter was used to transform K. lactis strain CBS 2360 as described in Example 5. The transformants were analyzed for the presence of integrated pGB17a-5 sequences in the host genome by Southern analysis. One transformant, 17ct-10l, containing at least three copies of pGB17a-5 in the genomic host DNA, was further analyzed for in vivo activity of P45Q17a (see Example 16).
Eksempel 15Example 15
Konstruktion og transformation af £45017° i bakterie-15 værterne Bacillus subtilis og Bacillus llcheniformis.Construction and transformation of £ 45017 ° in the bacterial hosts Bacillus subtilis and Bacillus llcheniformis.
(a) Konstruktion af ekspressionsvektoren.(a) Construction of the expression vector.
Til opnåelse af en passende ekspressionsvektor i Bacillus værter for bovin £450170 muterede man pGB17a-3 20 ved positionsrettet mutagenese som beskrevet i eksempel 14.To obtain a suitable expression vector in Bacillus hosts for bovine £ 450170, pGB17a-320 was mutated by position-directed mutagenesis as described in Example 14.
Som vist på figur 25 blev et Ndel restriktionssted indført ved ATG initieringskodonet under anvendelse af den syntetiske oligomer 17α-4: 25 S'-GCT GCC ACC CAG AQC ATA TG,T GGC TGC TCC T-3'As shown in Figure 25, an NdeI restriction site was introduced by the ATG initiation codon using the synthetic oligomer 17α-4: 25 S'-GCT GCC ACC CAG AQC ATA TG, T GGC TGC TCC T-3 '
NdelNde
Det opnåede plasmid pGB 17a-6 blev delvis fordø-30 jet med EcoRI: Man fraskilte DNA fragmentet, der indeholdt P450l7acDNA i fuld længde, ved gelelektroforese, isolerede det og ligerede til EcoRI fordøjet pBHA-1 DNA som vist på figur 26. Ligatet blev klonet molekylært 46 DK 175573 B1 ved overføring af ligeringsblandingen i E. coli JM101 til opnåelse af pGB17a-7.The obtained plasmid pGB 17a-6 was partially digested with EcoRI: The full length DNA fragment containing P45017acDNA was separated by gel electrophoresis, isolated and ligated to EcoRI digested pBHA-1 DNA as shown in Figure 26. The ligate was molecularly cloned by transferring the ligation mixture into E. coli JM101 to obtain pGB17a-7.
(b) Transformation af B. subtilis og B. licheniformis.(b) Transformation of B. subtilis and B. licheniformis.
5 Man indførte "Hpall" Bacillus promoteren op strøms for P45q17c<cDNA sekvenserne ved at fordøje pGB17a-6 med restriktionsenzymet Ndel, fraskille E. coll delen af overføringsplasmidet ved agarosegelelektro-forese og derefter at religere og transformere B. sub-10 tilis 1A40 (BGSC 1A40) kompetente celler. Man analyserede neomyclnresistente kolonier og kunne herved opnå plasmldet pGB17a-8 (figur 27).The "Hpall" Bacillus promoter was introduced upstream of the P45q17c <cDNA sequences by digesting pGB17a-6 with the restriction enzyme NdeI, separating the E.coll portion of the transfer plasmid by agarose gel electrophoresis, and then religating and transforming B. sub-10 to 1A40 ( BGSC 1A40) competent cells. Neomycline-resistant colonies were analyzed to obtain plasmid pGB17a-8 (Figure 27).
Man udførte også transformation af værten B. lichenlformls T5 (CBS 470.83) med pGB17a-8. Plasmldet 15 forbliver stabilt i den passende Bacillus vært som det kan ses ved restriktionsanalyse af pGB17a-8, selv efter mange generationers forløb.Transformation of host B. lichenlformls T5 (CBS 470.83) with pGB17a-8 was also performed. Plasma mass 15 remains stable in the appropriate Bacillus host as can be seen by restriction analysis of pGB17a-8, even after many generations.
Eksempel 16 20Example 16 20
In vivo aktivitet af P45017a i Kluyveromyces lactls 17a-101.In vivo activity of P45017a in Kluyveromyces lactls 17a-101.
Man opnåede K. lactls I7a-101 som beskrevet i 25 eksempel 14. Denne organisme blev inokuleret i 100 ml medium D. Medium D indeholdt pr. liter destilleret vand: Gærekstrakt (Difco) 10 gK. lactls I7a-101 were obtained as described in Example 14. This organism was inoculated into 100 ml of medium D. Medium D contained per ml. liter of distilled water: Yeast extract (Difco) 10 g
Bactopepton (Oxoid) 20 g 30 Dextrose 20 gBactopeptone (Oxoid) 20 g Dextrose 20 g
Efter sterilisering og afkøling til 30 C satte man 2,68 g gærnit rogenbase (Difco) opløst i 40 ml de- 47 DK 175573 B1 stilleret vand (steriliseret ved membranfiltrering) og 50 mg neomycin opløst i 1 ml destilleret vand (steriliseret ved membranfiltrering) til mediet. Derefter satte man 50 mg progesteron opløst i 1,5 ml dimethyl-5 formamid til 100 ml medium og dyrkede kulturen i 120 timer ved 30°C, hvorefter man ekstraherede 50 ml dyrkningsurt med 50 ml dichlormethan. Man centrifugerede blandingen og fraskilte det organiske solventlag. Di-chlormethan blev bortfordampet ved vakuumdestillation 10 og man optog den tørrede ekstrakt (ca 200 mg) i 0,5 ml chloroform. Denne ekstrakt indeholdt I7a-hydroxypro-gesteron, som det kunne vises ved tyndtlagschromato-grafi. Strukturen af forbindelsen kunne bekræftes ved hjælp af H-NMR og 13C-NMR. NMR analyse viste også, at 15 forholdet I7a-hydroxyprogesteron/progesteron i ekstrakten omtrent var 0,3.After sterilization and cooling to 30 ° C, 2.68 g of ferric rye base (Difco) dissolved in 40 ml of distilled water (sterilized by membrane filtration) and 50 mg of neomycin dissolved in 1 ml of distilled water (sterilized by membrane filtration) were added. to the medium. Then 50 mg of progesterone dissolved in 1.5 ml of dimethylformamide was added to 100 ml of medium and the culture was grown for 120 hours at 30 ° C, then 50 ml of culture herb was extracted with 50 ml of dichloromethane. The mixture was centrifuged and the organic solvent layer separated. Dichloromethane was evaporated by vacuum distillation 10 and the dried extract (about 200 mg) was taken up in 0.5 ml of chloroform. This extract contained I7a-hydroxyprogesterone, as shown by thin-layer chromatography. The structure of the compound could be confirmed by H-NMR and 13C-NMR. NMR analysis also showed that the ratio of 7α-hydroxyprogesterone / progesterone in the extract was approximately 0.3.
Eksempel 17 20 Molekylær kloning af en fuld længde cDNA, der koder for bovin cytochrom P450 steroid 21-hydroxylase (P450C2l).Example 17 Molecular cloning of a full length cDNA encoding bovine cytochrome P450 steroid 21 hydroxylase (P450C2l).
Man hybridiserede omtrent 106 pfu'er af det bovine binyrebark cDNA bibliotek, fremstillet som beskre-25 vet i eksempel 1, med en 32P endemærket oligo C21-1.Approximately 106 pfu's of the bovine adrenal cortex cDNA library, prepared as described in Example 1, were hybridized with a 32P end-labeled oligo C21-1.
Denne oligo, der indeholdt sekvensen 5'- GAT GAT GCT GCA GGT AAG CAG AGA GAA TTC-3', er en specifik sonde for det bovine P450C21 gen anbragt nedstrøms for EcoRl stedet i p450C21 cDNA, sekvensopdelt som beskrevet af 30 Yoshioka et al. (J. Biol. Chem., 261, 4106-4109, 1986).This oligo, which contained the sequence 5'- GAT GAT GCT GCA GGT AAG CAG AGA GAA TTC-3 ', is a specific probe for the bovine P450C21 gene located downstream of the EcoRl site of p450C21 cDNA, sequenced as described by 30 Yoshioka et al. (J. Biol. Chem., 261, 4106-4109, 1986).
Fra denne gennemsøgning opnåede man én hybridiserende pfu. EcoRl indsætningsstykket i dette rekombinante λ-gtll DNA blev underklonet i EcoRl stedet på pTZlBRFrom this search, one hybridizing pfu was obtained. The EcoRl insert in this recombinant λ-gtll DNA was subcloned into the EcoRl site of pTZ1BR
DK 175573 B1 48 til opnåelse af en konstruktion, der blev benævnt pGBS2l-i. Som vist i figur 28 indeholder dette plasmid et 1,53 kb EcoRl indsætningsstykke, der er komplementært til P450C21cDNA sekvenser fra EcoRl stedet ved po-5 sition 489 til polyadenyleringsstedet som beskrevet af Yoshioka et al., som vist ved nucleotidsekvensopdeling.DK 175573 B1 48 to obtain a construct named pGBS2l-i. As shown in Figure 28, this plasmid contains a 1.53 kb EcoR1 insert that is complementary to the P450C21cDNA sequences from the EcoR1 site at position 489 to the polyadenylation site as described by Yoshioka et al., As shown by nucleotide sequence splitting.
Til isolering af den resterende 5'-del (490 bp) af P45qC21cDNA fremstillede man et nyt bovint binyrebark cDNA bibliotek ved fremgangsmåden som beskrevet i 10 eksempel 1 med kun én modifikation. Som primer for syntesen af den første cDNA streng tilsatte man en yderligere oligomer til C21-2. Oligomer C21-2 med nucleotid-sekvensen 5'- AAG GAG AGA GAA TTC-3' er anbragt ned-strøms for EcoRI-stedet på P450C21cDNA fra position 504 15 til 490.To isolate the remaining 5 'portion (490 bp) of P45qC21cDNA, a new bovine adrenal cortical cDNA library was prepared by the procedure described in Example 1 with only one modification. As a primer for the synthesis of the first cDNA strand, an additional oligomer was added to C21-2. Oligomer C21-2 with the nucleotide sequence 5'- AAG GAG AGA GAA TTC-3 'is located downstream of the EcoRI site on P450C21cDNA from positions 504 to 490.
En gennemsøgning af dette cDNA bibliotek med en 32P endemærket oligomer C21-3 indeholdende den P450C21 specifikke sekvens 5'-CTT CCA CCG GCC CGA TAG CAG GTG AGC GCC ACT GAG-31 (positionerne 72-37) gav om-20 trent 100 hybridiserende pfu'er. Man underklonede EcoRl indsætningsstykket fra kun én rekombinant λ-gtll DNA i EcoRI-stedet på pTZ18R til opnåelse af en konstruktion, der.blev benævnt pGBC21-2.A search of this cDNA library with a 32P end-labeled oligomer C21-3 containing the P450C21 specific sequence 5'-CTT CCA CCG GCC CGA TAG CAG GTG AGC GCC ACT GAG-31 (positions 72-37) yielded approximately 20 hybridizing pfu 'is. The EcoRl insert was subcloned from only one recombinant λ-gtll DNA into the EcoRI site of pTZ18R to obtain a construct known as pGBC21-2.
Dette plasmid (figur 28) indholder et indsæt-25 ningsstykke på 540 bp, der er komplementært til P450C21CDNA sekvenserne for position -50 til EcoRl stedet ved position 489, som vist ved nucleotidsekvensopdeling.This plasmid (Figure 28) contains a 540 bp insert 25 complementary to the P450C21CDNA sequences for position -50 to the EcoR1 site at position 489, as shown by nucleotide sequence splitting.
4949
Eksempel 18 DK 175573 B1Example 18 DK 175573 B1
Konstruktion af en P450C21cDNA Bacillus ekspressionsvektor og transformation til bakterieværterne Bacillus 5 subtilis og Bacillus llchenlformls.Construction of a P450C21cDNA Bacillus expression vector and transformation into the bacterial hosts Bacillus 5 subtilis and Bacillus llchenlformls.
(a) Konstruktion af ekspressionsvektoren.(a) Construction of the expression vector.
Til konstruktion af en P450C21cDNA i fuld længde med flankerende sekvenser, der er specifikke for Bacil-10 lus ekspressionsvektoren pBHA-1, modificerede man først 5'-delen af F45qC21 genet ved fremgangsmåden med poly-merasekædereaktion (PCR) med pGBC21-2 som skabelon og to specifikke P45QC21-oligomere som primere. Oligomer C21-4 (5' -CTG ACT GAT ATC CAT ATG GTC CTC GCA GGG CTG 15 CTG-3') indeholder 21 nucleotider, der er komplementære til C21-sekvenser fra positionerne 1-21, og 18 yderligere baser til opnåelse af et EcoRV restriktionssted og et Ndel restriktionssted ved ATG initieringskodonet.To construct a full-length P450C21cDNA with flanking sequences specific for the Bacil-10 loop expression vector pBHA-1, the 5 'portion of the F45qC21 gene was first modified by the polymerase chain reaction (PCR) method with pGBC21-2 as template. and two specific P45QC21 oligomers as primers. Oligomer C21-4 (5 'CTG ACT GAT ATC CAT ATG GTC CTC GCA GGG CTG 15 CTG-3') contains 21 nucleotides complementary to C21 sequences from positions 1-21, and 18 additional bases to obtain a EcoRV restriction site and an NdeI restriction site at the ATG initiation codon.
Oligomer C21-5 (5'-AGC TCA GAA TTC CTT CTG GAT 20 GGT CAC-31) er 21 baser, der er komplementære til minusstrengen opstrøms for EcoRI-stedet ved position 489.Oligomer C21-5 (5'-AGC TCA GAA TTC CTT CTG GAT 20 GGT CAC-31) are 21 bases complementary to the minus strand upstream of the EcoRI site at position 489.
Man udførte PCR som beskrevet af Saiki et al (Science 239, 487-491, 1988) med små modifikationer.PCR was performed as described by Saiki et al (Science 239, 487-491, 1988) with minor modifications.
PCR blev udført i et rumfang på 100 pi indeholdende: 50 2 5 mM KCl, 10 mM Tris-HCl pH 8,3, 1,5 mM MgCl2, 0,01% (w/v) gelatine, 200 pM af hver af dNTP, 1 pM af hver af C21-primerne og 10 ng pGBC2i-2 skabelon. Efter denaturering (7 minutter ved 100°C) og tilsætning af 2 enheder Tag-polymerase (Cetus) lod man reaktionsblandingen 30 undergå 25 amplificeringscykler (hver: 2 minutter ved 55°C, 3' ved 72°C, 1 minut ved 94°C) i et DNA-amplifier apparat (Perkin-Elmer).PCR was performed in a volume of 100 µl containing: 50 µM KCl, 10 mM Tris-HCl pH 8.3, 1.5 mM MgCl 2, 0.01% (w / v) gelatin, 200 µM each of dNTP , 1 µM of each of the C21 primers and 10 ng of pGBC2i-2 template. After denaturation (7 minutes at 100 ° C) and addition of 2 units of Tag polymerase (Cetus), the reaction mixture was allowed to undergo 25 amplification cycles (each: 2 minutes at 55 ° C, 3 'at 72 ° C, 1 minute at 94 ° C) in a DNA amplifier apparatus (Perkin-Elmer).
I den sidste cyklus udelod man denatureringen.In the last cycle, denaturing was excluded.
En skematisk oversigt over denne P450C21cDNA opforme-35 ring vises på figur 29.A schematic overview of this P450C21cDNA amplification is shown in Figure 29.
50 DK 175573 B150 DK 175573 B1
Det opformerede fragment blev fordøjet med Ecorv og EcoRl og indsat ' ved molekylær kloning i passende steder på pSP73 (Promega). Det opnåede plasmid benævnes pGBC21 -3. Som vist i figur 30 indsatte man 3'-P450C21 5 EcoRl fragmentet fra pGBC21-l i rigtig orientering i EcoRl stedet på pGBC21-3. Den herved opnåede vektor pGBC21-4 blev fordøjet med EcoRV og Kpnl (Kpnl findes ved det multiple kloningssted på pSP73), og man isolerede fragmentet med indhold af P450C21cDNA i fuld læng-10 de ved gelelektroforese og indsatte dette i de relevante steder på pBHA-1 ved molekylær kloning. Det heraf opnåede plasmid pGBC21-5 illustreres på figur 31.The amplified fragment was digested with Ecorv and EcoRl and inserted by molecular cloning at appropriate sites on pSP73 (Promega). The plasmid obtained is designated pGBC21 -3. As shown in Figure 30, the 3'-P450C21 5 EcoRl fragment from pGBC21-1 was inserted in proper orientation in the EcoRl site of pGBC21-3. The resulting vector pGBC21-4 was digested with EcoRV and Kpnl (Kpnl is found at the multiple cloning site of pSP73), and the fragment containing P450C21cDNA full-length was isolated by gel electrophoresis and inserted into the relevant sites on pBHA. 1 by molecular cloning. The resulting plasmid pGBC21-5 is illustrated in Figure 31.
(b) Transformation af Bacillus.(b) Transformation of Bacillus.
15 Man indførte "Hpall" Bacillus promotoren op strøms for P450C21cDNA genet ved fordøjelse af pGBC21-5 med restriktionsenzymet Ndel, fraskillelse af E. coli delen af overføringsplasmidet ved agarosegelelektrofo-rese og en påfølgende religering og transformation af 20 B. subtilis 1 A40 (BGSC 1 A40) kompetente celler. Man analyserede neomycinresistente kolonier til opnåelse af PGBC21-6 (figur 32).The "Hpall" Bacillus promoter was introduced upstream of the P450C21cDNA gene by digesting pGBC21-5 with the restriction enzyme NdeI, separation of the E. coli portion of the transfer plasmid by agarose gel electrophoresis, and a subsequent religation and transformation of 20 B. subtilis 1 A40 (BGS). 1 A40) competent cells. Neomycin-resistant colonies were analyzed to obtain PGBC21-6 (Figure 32).
Man udførte også transformation af værten B. licheniformis T5 (CBS 470.83) med pGBC21-6. Plasmidet 25 forbliver stabilt i begge Bacillus værter, som det kan ses ved restriktionsanalyse.Transformation of the host B. licheniformis T5 (CBS 470.83) with pGBC21-6 was also performed. Plasmid 25 remains stable in both Bacillus hosts, as can be seen by restriction analysis.
5151
Eksempel 19 DK 175573 B1Example 19 DK 175573 B1
Konstruktion af en P450C21cDNA gærekspressionsvektor og transformation til gærværten Kluyverornyces lactis.Construction of a P450C21cDNA yeast expression vector and transformation into the yeast host Kluyverornyces lactis.
5 (a) Konstruktion af ekspressionsvektoren.5 (a) Construction of the expression vector.
Til opnåelse af en egnet ekspressionsvektor i gærværter for bovin P450C21 muterede man pGBC21-2 ved positionsrettet mutagenese som beskrevet i eksempel 14.To obtain a suitable expression vector in yeast hosts for bovine P450C21, pGBC21-2 was mutated by position-directed mutagenesis as described in Example 14.
10 Til denne mutation benyttede man oligomer C21-6 (S’-CCT CTG CCT GGG TCG ACA AAA ATG GTC CTC GCA GGG-3') til at opnå et Sall restriktionssted og optimale gærtranslationssignaler opstrøms for ATG initieringskodonet, som vist på figur 33.For this mutation, oligomer C21-6 (S'-CCT CTG CCT GGG TCG ACA AAA ATG GTC CTC GCA GGG-3 ') was used to obtain a SalI restriction site and optimal yeast translation signals upstream of the ATG initiation codon, as shown in Figure 33.
15 Sall/EcoRl DNA fragmentet fra det heraf afledte plasmid pGBC21-7 blev ligeret til 3'-P450C21-EcoRI-fragmentet fra pGBC21-l og indsat ved molekylær kloning i de relevante steder på pSP73 som vist på figur 34.The SalI / EcoR1 DNA fragment from the derived plasmid pGBC21-7 was ligated to the 3'-P450C21 EcoRI fragment from pGBC21-1 and inserted by molecular cloning at the relevant sites on pSP73 as shown in Figure 34.
Det heraf afledte pGBC21-8 blev gennemskåret med Sall 20 og EcoRV (EcoRV stedet findes ved det multiple kloningssted for pSP73), og man indsatte DNA fragmentet, der indeholdt P4gøC21cDNA i fuld længde, i gærekspressionsvektoren pGB950. Den heraf afledte pGBC21-9 ses på figur 35.The resulting pGBC21-8 was cut with SalI 20 and EcoRV (the EcoRV site is located at the multiple cloning site of pSP73), and the DNA fragment containing P4g0C21cDNA full-length was inserted into the yeast expression vector pGB950. The resulting pGBC21-9 is shown in Figure 35.
,25., 25th
(b) Transformation af K. lactis.(b) Transformation of K. lactis.
Man fordøjede 15 ug pGBC21-9 med SacII og udførte transformation af K. lactis CBS 2360 som beskrevet i eksempel 5(c).15 µg of pGBC21-9 was digested with SacII and transformation of K. lactis CBS 2360 was performed as described in Example 5 (c).
5252
Eksempel 20 DK 175573 B1Example 20 DK 175573 B1
Molekylær kloning af fuld længde cDNA, der koder for bovin cytochrom Ρ450 steroid ΐΐβ-hydroxylase (Ρ450ΐΐβ).Molecular cloning of full-length cDNA encoding bovine cytochrome Ρ450 steroid ΐΐβ-hydroxylase (Ρ450ΐΐβ).
55
Man fremstillede et bovint binyrebark cDNA bibliotek som beskrevet i eksempel 1 med én modifikation.A bovine adrenal cortex cDNA library was prepared as described in Example 1 with one modification.
En yderligere F450118-specifik primer (oligomer 11β-1) med nucleotidsekvensen 5'-GGC AGT GTG CTG ACA CGA-3' 10 blev sat til reaktionsblandingen ved syntesen af den første streng cDNA. Oligomer 11β-1 findes netop ned-strøms for translationsstopkodon fra position 1530 til 1513. Nucleotidsekvenser og positioner på kortet af de nævnte P450l^-oligomere stammer alle fra Ρ450ΐΐβοϋΝΑ 15 sekvensdata beskrevet af Morohashi et al. (J. Biochem.An additional F450118-specific primer (oligomer 11β-1) with the nucleotide sequence 5'-GGC AGT GTG CTG ACA CGA-3 '10 was added to the reaction mixture by the synthesis of the first strand cDNA. Oligomer 11β-1 is found just downstream of translation stop codon from positions 1530 to 1513. Nucleotide sequences and positions on the map of said P4501 oligomers all derive from the ΐΐ450ΐΐβοϋΝΑ 15 sequence data described by Morohashi et al. (J. Biochem.
102 (3), 559-568, 1987). Man gennemsøgte cDNA biblioteket med en 32P-mærket oligomer 11β-2 (5'-CCG CAC CCT GGC CTT TGC CCA CAG TGC CAT-3'), og denne findes ved S'-enden af Ρ45011βοϋΝΑ fra position 36 til 1.102 (3), 559-568, 1987). The cDNA library was searched with a 32P-labeled oligomer 11β-2 (5'-CCG CAC CCT GGC CTT TGC CCA CAG TGC CAT-3 '), and this is found at the S' end of Ρ45011βοϋΝΑ from positions 36 to 1.
20 Gennemsøgning med oligomer 11β-2 gav 6 hybri- diserende pfu'er. Disse blev yderligere renset og analyseret med oligomer 11β-3 (5'-CAG CTC AAA GAG AGT CAT CAG CAA GGG GAA GGC TGT-3’ , positionerne 990 til 955).Scanning with oligomer 11β-2 yielded 6 hybrid pfu's. These were further purified and analyzed with oligomer 11β-3 (5'-CAG CTC AAA GAG AGT CAT CAG CAA GGG GAA GGC TGT-3 ', positions 990 to 955).
To ud af seks viste et positivt hybridiseringsslgnal 25 med 32P-mærket oligomer 11β-3.Two out of six showed a positive hybridization signal 25 with 32 P-labeled oligomer 11β-3.
Man underklonede EcoRI indsætningsstykkerne fra begge ΐΐβ-λ-gtll rekombinanter i EcoRI stedet på pTZ18R. En klon med et EcoRI indsætningsstykke på 2,2 kb (ρΟΒΙΙβ-Ι) blev yderligere analyseret ved restrik-•30 tionsenzymkortlægning og vises på figur 36. ρσΒΙΙβ-ΐ indeholder alle kodende P4cjø118cDNA sekvenser som bestemt af Morohashi et al.The EcoRI inserts from both ΐΐβ-λ-gtII recombinants were subcloned into the EcoRI site of pTZ18R. A clone with an EcoRI insert of 2.2 kb (ρΟΒΙΙβ-Ι) was further analyzed by restriction enzyme mapping and shown in Figure 36. ρσΒΙΙβ-ΐ contains all coding P4c128cDNA sequences as determined by Morohashi et al.
5353
Eksempel 21 DK 175573 B1Example 21 DK 175573 B1
Konstruktion af en P450C21cDNA Bacillus ekspressionsvektor og transformation til bakterieværterne Bacillus 5 subtilis og Bacillus llcheniformls.Construction of a P450C21cDNA Bacillus expression vector and transformation into the bacterial hosts Bacillus 5 subtilis and Bacillus llcheniformls.
(a) Konstruktion af ekspressionsvektoren.(a) Construction of the expression vector.
Man opnåede en P450lipcDNA i fuld længde med modificerede flankerende sekvenser til Bacillus eks-10 pressionsvektor pBHA-1 ved PCR metoden (beskrevet i eksempel 18), idet man benyttede pGB118-l som skabelon og to specifikke P450llp-oligomere som primere.A full-length P450lipcDNA with modified flanking sequences was obtained for Bacillus expression vector pBHA-1 by the PCR method (described in Example 18), using pGB118-1 as template and two specific P450llp oligomers as primers.
Oligomer 11β-4 (5' -TTT GAT ATC GAA TTC CAT ATG GGC ACA AGA GGT GCT GCA GCC-3') indeholder 21 baser, 15 der er komplementære til den modne P450lipcDNA sekvens fra position 72 til 93, og 21 baser til opnåelse af EcoRV, EcoRI og Ndel restriktionssteder og et ATG initieringskodon.Oligomer 11β-4 (5 '-TTT GAT ATC GAA TTC CAT ATG GGC ACA AGA GGT GCT GCA GCC-3') contains 21 bases, complementary to the mature P450lipcDNA sequence from positions 72 to 93, and 21 bases to obtain of EcoRV, EcoRI and Ndel restriction sites and an ATG initiation codon.
Oligomer 11β-5 (5’-TAA CGA TAT CCT CGA GGG TAC 20 CTA CTG GAT GGC CCG GAA GGT-3) indeholder 21 baser, der er komplementære til minus P450lipcDNA strengen opstrøms for translationsstopkodonet ved position 1511, og 21 baser til opnåelse af restriktionssteder for EcoRV, Dhol og KpnI.Oligomer 11β-5 (5'-TAA CGA TAT CCT CGA GGG TAC 20 CTA CTG GAT GGC CCG GAA GGT-3) contains 21 bases complementary to the minus P450lipcDNA strand upstream of the translation stop codon at position 1511, and 21 bases to obtain restriction sites for EcoRV, Dhol and KpnI.
' 25 Efter PCR opformering med den ovenfor nævnte skabelon og de ovenfor nævnte P45Qll8-primere fordøjede man det opformerede fragment (1,45 kb) med EcoRI og KpnI og indsatte det ved molekylær kloning i Bacillus ekspressionsvektoren pBHA-1 gennemskåret med EcoRI og . 30 KpnI til opnåelse af vektoren pGBlip-2 (se figur 36).After PCR amplification with the above template and the above-mentioned P45Q118 primers, the amplified fragment (1.45 kb) was digested with EcoRI and KpnI and inserted by molecular cloning into the Bacillus expression vector pBHA-1 intersected with EcoRI and. 30 KpnI to obtain the vector pGBlip-2 (see Figure 36).
54 DK 175573 B1 (b) Transformation af Bacillus.54 DK 175573 B1 (b) Transformation of Bacillus.
Man indførte "Hpall" Bacillus promoteren opstrøms for P45011PcDNA sekvenserne ved fordøjelse af pGBll3-2 med Ndel, adskillelse af E. coll delen af 5 overføringsplasmidet ved agarosegelelektroforese og en påfølgende religering (som beskrevet i eksempel 18) og transformation af B. subtills 1A40 (BGSC 1A40) kompetente celler. Man analyserede neomycinresistente kolonier og opnåede herved plasmid pGB118-3. Det afledte 10 plasmid pGBlip-3 blev også overført til B. llchenifor-mis værtsstammen T5 (CBS 470.83).The "Hpall" Bacillus promoter upstream of the P45011PcDNA sequences was introduced by digesting pGBII3-2 with NdeI, separation of the E.coll portion of the 5 transfer plasmid by agarose gel electrophoresis, and subsequent religation (as described in Example 18) and transformation of B. subtills 1A40 ( BGSC 1A40) competent cells. Neomycin-resistant colonies were analyzed and plasmid pGB118-3 was obtained. The derived plasmid pGBlip-3 was also transferred to the B. licheniferous host strain T5 (CBS 470.83).
Eksempel 22 15 Konstruktion af en P450110cDNA gærekspressionsvektor og transformation til gærværten Kluyveromyces lactis.Example 22 Construction of a P450110cDNA yeast expression vector and transformation to the yeast host Kluyveromyces lactis.
(a) Konstruktion af ekspressionskassetten.(a) Construction of the expression cassette.
Man opnåede P45q113cDNA i fuld længde med modi-20 ficerede flankerende sekvenser til gærekspressionsvektoren pGB950 ved PCR metoden (beskrevet i eksempel 18) med pGBll(3-l som skabelon og to specifikke P^ølip-oli-gomere som primere.Full-length P45q113cDNA was obtained with modified flanking sequences for the yeast expression vector pGB950 by the PCR method (described in Example 18) with pGBII (3-1 as template and two specific P1β1-lip oligomers as primers).
Oligomer 11(3-6 (S'-CTT CAG TCG ACA ΑΑΑ ATG GGC ‘25 ACA AGA GGT GCT GCA GCC-3’) indeholder 21 baser, der er komplementære til den modne P45q11P cDNA sekvens fra position 72 til 93, og 18 yderligere baser til opnåelse af et Sall restriktionssted, et optimalt gærtranslationssignal og et ATG Initieringskodon.Oligomer 11 (3-6 (S'-CTT CAG TCG ACA ΑΑΑ ATG GGC '25 ACA AGA GGT GCT GCA GCC-3 ') contains 21 bases complementary to the mature P45q11P cDNA sequence from positions 72 to 93, and 18 additional bases for obtaining a SalI restriction site, an optimal yeast translation signal and an ATG Initiation codon.
30 Oligomer 11β-5 findes beskrevet i eksempel 21(a). Efter PCR opformering med den ovenfor nævnte skabelon og de ovenfor nævnte P45QllB-primere fordøjede man det opformerede fragment (1,45 kb) med Sall og Xhol DK 175573 B1 55 og indsatte det ved molekylær kloning i gærekspressionsvektoren pGB950, der var gennemskåret med Sall, til opnåelse af vektoren pGBlip-4 (figur 37).Oligomer 11β-5 is described in Example 21 (a). After PCR amplification with the above template and the above-mentioned P45Q11B primers, the amplified fragment (1.45 kb) was digested with SalI and Xhol DK 175573 B1 55 and inserted by molecular cloning into the yeast expression vector pGB950 cut with SalI, to obtain the vector pGBlip-4 (Figure 37).
5 (b) Transformation af K. lactls.5 (b) Transformation of K. lactls.
Man gennemskår 15 yg pGBllp-4 ved det unikke Sadl sted i lactasepromotoren og udførte transformation af K. lactis CBS 2360 som beskrevet i eksempel 5(c).15 µg of pGBllp-4 was cut at the unique SadI site of the lactase promoter and transformation of K. lactis CBS 2360 was performed as described in Example 5 (c).
10 Eksempel 23Example 23
Molekylær kloning og konstruktion af cDNA i fuld længde, der koder for bovin adrenodoxin (ADX) og påfølgende transformation og ekspression af ADXcDNA i gæren Kluy-15 veromyces lactis.Molecular cloning and construction of full-length cDNA encoding bovine adrenodoxin (ADX) and subsequent transformation and expression of ADXcDNA in the yeast Kluy-15 veromyces lactis.
(a) Molekylær kloning af ADX.(a) Molecular cloning of ADX.
Man opnåede direkte en fuld længde ADXcDNA med 5*- og 3’-flankerende sekvenser modificeret til gæreks-20 pressionsvektoren pGB950 fra en bovin binyrebarks mRNA/cDNA samling (for detaljeret beskrivelse se eksempel 1) ved opformering under anvendelse af PCR metoden (se eksempel 18).A full length ADXcDNA with 5 * and 3 'flanking sequences modified to the yeast expression vector pGB950 was directly obtained from a bovine adrenal cortex mRNA / cDNA assembly (for detailed description see Example 1) by amplification using the PCR method (see Example 18).
Til opformering af ADXcDNA syntetiserede man to 25 syntetiske oligomerprimere.To amplify ADXcDNA, two synthetic oligomer primers were synthesized.
Oligomer ADX-1 (5'-CTT CAG TCG ACA AAA ATG AGC AGC TCA GAA GAT AAA ATA-3') indeholdt 21 baser, der var komplementære til 5'-enden af moden ADXcDNA sekvens, som beskrevet af Okamura et al. (Proc. Natl. Acad. Sci.Oligomer ADX-1 (5'-CTT CAG TCG ACA AAA ATG AGC AGC TCA GAA GAT AAA ATA-3 ') contained 21 bases complementary to the 5' end of mature ADXcDNA sequence, as described by Okamura et al. (Proc. Natl. Acad. Sci.
30 USA, 82, 5705-5709, 1985) fra positionerne 173 til 194. Oligomeren ADX-1 indeholder ved 5'-enden 18 yderligere nucleotider til opnåelse af Sall restriktionssted, et optimalt gærtranslationssignal og en ATG initieringskodon.30, USA, 82, 5705-5709, 1985) from positions 173 to 194. The oligomer ADX-1 contains at the 5 'end 18 additional nucleotides to obtain the Sall restriction site, an optimal yeast translation signal and an ATG initiation codon.
DK 175573 B1 , 56DK 175573 B1, 56
Oligomeren ADX-2 (5'-TGT AAG GTA CCC GGG ATC CTT ATT CTA TCT TTG AGG AGT T-3') er komplementær til 3'-enden af minusstrengen af ADXcDNA fra position 561 til 540 og indeholder yderligere nucleotider til dan-5 nelse af restriktionssteder for BamHI, Smal og KpnI.The oligomer ADX-2 (5'-TGT AAG GTA CCC GGG ATC CTT ATT CTA TCT TTG AGG AGT T-3 ') is complementary to the 3' end of the minus strand of ADXcDNA from positions 561 to 540 and contains additional nucleotides to dan-5 restriction sites for BamHI, SmaI and KpnI.
Man udførte PCR som beskrevet i eksempel 18 med 1 μΜ af hver ADX-primer og 10 μΐ mRNA/cDNA blanding (som beskrevet i eksempel 1) som skabelon.PCR was performed as described in Example 18 with 1 μΜ of each ADX primer and 10 μΐ mRNA / cDNA mixture (as described in Example 1) as template.
En skematisk oversigt over denne ADXcDNA opfor-10 mering vises på figur 38.A schematic overview of this ADXcDNA formulation is shown in Figure 38.
Det opformerede fragment indeholder en ADXcDNA sekvens i fuld længde med modificeret flankeringer, og man karakteriserede dette ved restriktionsstedsanalyse og nucleotidsekvensopdeling.The amplified fragment contains a full length ADXcDNA sequence with modified flankings, and this was characterized by restriction site analysis and nucleotide sequence division.
15 (b) Konstruktion af ekspressionsvektoren.(B) Construction of the expression vector.
Man fordøjede det opformerede ADXcDNA fragment med Sall og Smal og indsatte det ved molekylær kloning i gærekspressionsvektoren pGB950, der var gennemskåret 20 med Sall og EcoRV. Det heraf afledte plasmid pGBADX-1 ses på figur 38.The amplified ADXcDNA fragment was digested with SalI and SmaI and inserted by molecular cloning into the yeast expression vector pGB950, which was cut with SalI and EcoRV. The derived plasmid pGBADX-1 is shown in Figure 38.
(c) Transformation af K. lactis.(c) Transformation of K. lactis.
Man gennemskår 15 μρ pGBADX-1 ved det unikke 25 SacII-sted i lactasepromotoren og udførte transformation af K. lactis CBS 2360 som beskrevet i eksempel 5(c).15 μρ of pGBADX-1 was cut at the unique 25 SacII site of the lactase promoter and transformation of K. lactis CBS 2360 was performed as described in Example 5 (c).
(d) Analyse af transformanterne.(d) Analysis of the transformants.
30 Man udvalgte to transformanter ADX-101 og ADX-102 og kontrolstamme CBS 2360 til yderligere analyse. Stammerne blev dyrket i YEPD-medium i ca. 64 timer ved 30 C. Man isolerede det totale cellulære pro- 57 DK 175573 B1 tein som beskrevet i eksempel 5(d). Fra supernatanterne udtog man prøver på 8 μΐ til analyse på immunblot (se figur 39, bane 3, 4 og 5).Two transformants ADX-101 and ADX-102 and control strain CBS 2360 were selected for further analysis. The strains were grown in YEPD medium for ca. 64 hours at 30 C. The total cellular protein was isolated as described in Example 5 (d). From the supernatants, samples of 8 μΐ were taken for immunoblot analysis (see Figure 39, lanes 3, 4 and 5).
Resultaterne viser, at et protein med den vente-5 de længde (14 kDa) eksprimeres i K. lactls celler transformeret med pGBADX-1.The results show that a waiting length protein (14 kDa) is expressed in K. lactl cells transformed with pGBADX-1.
In vitro ADX-aktiviteten af transformant ADX-102 beskrives i eksempel 24.The in vitro ADX activity of transformant ADX-102 is described in Example 24.
Eksempel 24Example 24
In vitro aktivitet af adrenodoxin opnået fra Kluyvero-myces lactis ADX-102.In vitro activity of adrenodoxin obtained from Kluyveromyces lactis ADX-102.
13 Man dyrkede K. lactls ADX-102, opnået som be skrevet i eksempel 23, og kontrolstammen K. lactis CBS 2360 i 100 ml YEPD medium (1% gærekstrakt, 2% pepton, 2% glucose, monohydrat) med indhold af 2,5 ml af en 6,7% (w/w) gærnitrogenbase (Difco laboratories) opløs- 20 ning og 100 mg l-1 af geneticin (G418 sulfat; Gibco 013 K. lactis ADX-102 obtained as described in Example 23 was grown and the control strain K. lactis CBS 2360 in 100 ml of YEPD medium (1% yeast extract, 2% peptone, 2% glucose, monohydrate) containing 2, 5 ml of a 6.7% (w / w) yeast nitrogen base (Difco laboratories) solution and 100 mg l-1 of geneticin (G418 sulfate; Gibco 0
Ltd.)/ i 56 timer ved 30 C. Cellerne blev fracentrifu-geret (4000 g, 15 minutter), igen suspenderet i fysiologisk saltopløsning og vasket med en phosphatpuffer (pH 7,0, 50 mM). Efter centrifugering (4000 g, 15 mi-25 nutter) suspenderede man centrifugebundfaldet i en phosphatpuffer (pH 7,0, 50 mM) til opnåelse af en suspension med indhold af 0,5 g våd vægt af celler pr. ml. Man knuste cellerne under anvendelse af en Braun MSK Homogenizer (6 x 15 sekunder, 0,45-0,50 mm 30 glasperler). Ikke sønderdelte celler blev fjernet ved centrifugering (4000 g, 15 minutter). Den cellefrie ek- 0 strakt (40 mg protein/ml) blev lagret ved -20 C.Ltd.) / for 56 hours at 30 C. The cells were centrifuged (4000 g, 15 minutes), resuspended in physiological saline solution and washed with a phosphate buffer (pH 7.0, 50 mM). After centrifugation (4000 g, 15 ml nuts), the centrifuge precipitate was suspended in a phosphate buffer (pH 7.0, 50 mM) to obtain a suspension containing 0.5 g wet weight of cells per ml. ml. The cells were crushed using a Braun MSK Homogenizer (6 x 15 seconds, 0.45-0.50 mm 30 glass beads). Non-disrupted cells were removed by centrifugation (4000 g, 15 minutes). The cell-free extract (40 mg protein / ml) was stored at -20 ° C.
ADX aktivitet, dvs. kapacitet for elektronoverførsel fra adrenodoxinreduktase til cytochrom P450ssc' 58 DK 175573 B1 i de cellefrie ekstrakter blev bestemt ved et p45oSSC-aktivitetsassay. Assayblandingen bestod af følgende opløsninger:ADX activity, ie electron transfer capacity from adrenodoxin reductase to cytochrome P450ssc '58 DK 175573 B1 in the cell-free extracts was determined by a p45oSSC activity assay. The assay mixture consisted of the following solutions:
Opløsning A (naturlig P450SSC elektrondonerende 5 system med undtagelse af ADX): en 50 mM kaliumphosphat-puffer (pH 7,0), indeholdende 3 mM EDTA, 2 yM adrenodo-xinreduktase (oprenset fra bovin binyrebark), 1 mM NADPH (elektrondonor), 15 mM glucose-6-phosphat og 16 enheder/ml glucose-6-phosphat-dehydrogenase (NADPH re-10 genererende system).Solution A (natural P450SSC electron donating system with the exception of ADX): a 50 mM potassium phosphate buffer (pH 7.0) containing 3 mM EDTA, 2 µM adrenodo-xine reductase (purified from bovine adrenal cortex), 1 mM NADPH (electron donor) , 15 mM glucose-6-phosphate and 16 units / ml glucose-6-phosphate dehydrogenase (NADPH re-generating system).
Opløsning B (substrat og enzym): en micelleop-løsning af 75 yM cholesterol (dobbelt radiomærket med [26,27-14C] cholesterol (40 Ci/mol) og [7a-3H] cholesterol (400 Ci/mol)) og 1,5 yM P45qSSC (oprenset fra 15 bovin binyrebark) i 10% (v/v) Tergitol NP 40/ethanol (1:1, v/v).Solution B (substrate and enzyme): a micelle solution of 75 µM cholesterol (double radiolabelled with [26.27-14C] cholesterol (40 Ci / mol) and [7a-3H] cholesterol (400 Ci / mol)) and 1 , 5 µM P45qSSC (purified from 15 bovine adrenal cortex) in 10% (v / v) Tergitol NP 40 / ethanol (1: 1, v / v).
Man påbegyndte assayet ved at blande 7 5 yl af opløsning A med 50 yl opløsning B og 125 yl cellefri ekstrakt eller 125 yl af en kallumphosphatpuffer (50 20 mM, pH 7,0) med indhold af 10 ym ADX (oprenset fra bovin binyrebark). Man holdt blandingen under blid omrø-The assay was started by mixing 7 µl of solution A with 50 µl of solution B and 125 µl of cell-free extract or 125 µl of a callum phosphate buffer (50 20 mM, pH 7.0) containing 10 µm ADX (purified from bovine adrenal cortex) . The mixture was kept under gentle stirring.
OISLAND
ring ved 30 C og udtog prøver efter 15 minutters inku-bering, idet man fortyndede disse med 100 yl vand. Fra hver prøve ekstraherede man substrat og produkt eller 25 produkter med 100 yl methanol og 150 yl chloroform. Efter centrifugering (5000 g, 2 minutter) samlede man chloroformlaget og tørrede det, hvorefter man opløste den indtørrede remanens i 50 yl acetone med indhold af 0,5 mg af en steroidblanding (cholesterol, pregnenolon og progesteron (1:1:1, w/w/w)), hvorefter man tilsatte 110 yl koncentreret myresyre og opvarmede suspensionen 0 til 120 C i 15 minutter. Herefter bestemte man forholdet *4c/3H ved hjælp af dobbeltmærket væskescintilla- 59 DK 175573 B1 tionstælling. Forholdet er et direkte mål for sidekædespal tnings reakt ionen, idet den 14C-mærkede sidekæde bortfordampes fra blandingen som isocaprylsyre under opvarmningen. Ved dette assay kunne ADX elektronbære-5 raktivitet let demonstreres i den cellefrie ekstrakt fra K. lactis ADX-102. Ved assays med cellefrie ekstrakter fra K. lactis ADX-102 eller med renset ADX, blev sidekæden på cholesterol spaltet inden for 15 minutter med et udbytte på 50%, hvorimod man ikke i as-sayet med cellefrie ekstrakter fra kontrolstammen K. lactis CBS 2360 kunne påvise nogen form for sidekædespal tning .ring at 30 ° C and took samples after 15 minutes of incubation, diluting these with 100 µl water. From each sample, substrate and product or 25 products were extracted with 100 µl methanol and 150 µl chloroform. After centrifugation (5000 g, 2 minutes), the chloroform layer was collected and dried, then the dried residue was dissolved in 50 µl acetone containing 0.5 mg of a steroid mixture (cholesterol, pregnenolone and progesterone (1: 1: 1, w)). (w / w)), after which 110 µl of concentrated formic acid was added and the suspension heated to 0 to 120 ° C for 15 minutes. The ratio * 4c / 3H was then determined by double-labeled liquid scintillation counting. The ratio is a direct measure of the side chain cleavage reaction, evaporating the 14C-labeled side chain from the mixture as isocaprylic acid during heating. In this assay, ADX electron carrier activity could be readily demonstrated in the cell-free extract of K. lactis ADX-102. In assays with cell-free extracts from K. lactis ADX-102 or with purified ADX, the side chain of cholesterol was cleaved within 15 minutes with a yield of 50%, whereas in the assay with cell-free extracts from the control strain K. lactis CBS 2360 could detect any kind of side chain cleavage.
Eksempel 25 15Example 25 15
Molekylær kloning og konstruktion af fuld længde cDNA, der koder for bovin adrenodoxinoxidoreduktase (ADR), og påfølgende transformation af ADRcDNA i gæren Kluyvero-myces lactis.Molecular cloning and construction of full-length cDNA encoding bovine adrenodoxine oxidoreductase (ADR), and subsequent transformation of ADRcDNA into the yeast Kluyvero myces lactis.
20 (a) Molekylær kloning af adrenodoxinoxidoreduktase.(A) Molecular cloning of adrenodoxine oxidoreductase.
Man fremstillede et bovint binyrebark cDNA bibliotek som beskrevet i eksempel 1 med en modifikation.A bovine adrenal cortex cDNA library was prepared as described in Example 1 with a modification.
En yderligere ADR specifik primer (oligomer ADR-1) med 25 nucleotidsekvensen 5'-GGC TGG GAT CTA GGC-3' blev sat til reaktionsblandingen for syntesen af den første streng af cDNA. Oligomer ADR-1 findes netop nedstrøms for translationsstopkodon fra position 1494 til 1480. Nucleotidsekvenser og positioner på kortet af de nævnte 30 ADR-oligomere stammer alle fra ADRcDNA sekvensdata beskrevet af Nonaka et al., Biochem. Biophys. Res. Comm.An additional ADR specific primer (oligomer ADR-1) with the nucleotide sequence 5'-GGC TGG GAT CTA GGC-3 'was added to the reaction mixture for the synthesis of the first strand of cDNA. Oligomeric ADR-1 is found just downstream of translation stop codon from positions 1494 to 1480. Nucleotide sequences and positions on the map of said 30 ADR oligomers all derive from the ADRcDNA sequence data described by Nonaka et al., Biochem. Biophys. Res. Comm.
145(3), 1239-1247, 1987.145 (3), 1239-1247, 1987.
Det opnåede cDNA bibliotek blev gennemsøgt med en 32P-mærket oligomer ADR-2 (5' -CAC CAC ACA GAT CTG GGG GGT CTG CTC CTG TGG GGA-3').The obtained cDNA library was searched with a 32P-labeled oligomeric ADR-2 (5 '-CAC CAC ACA GAT CTG GGG GGT CTG CTC CTG TGG GGA-3').
60 DK 175573 B160 DK 175573 B1
Man kunne identificere fire hybridiserende pfu'er, som derefter blev renset. Imidlertid viste kun én pfu også et positivt signal med oligomer ADR-3 (5' -TTC CAT CAG CCG CTT CCT CGG GCG AGC GGC CTC 5 CCT-3' ), der findes i midten af ADRcDNA (position 840 til 805). ADRcDNA indsætningsstykker (ca. 2 kb) blev molekylært klonet i EcoRI-stedet på pTZ18R.Four hybridizing PFUs could be identified, which were then purified. However, only one pfu also showed a positive signal with oligomeric ADR-3 (5 '-TTC CAT CAG CCG CTT CCT CGG GCG AGC GGC CTC 5 CCT-3') found in the center of ADRcDNA (positions 840 to 805). ADRcDNA inserts (approximately 2 kb) were molecularly cloned into the EcoRI site of pTZ18R.
Det opnåede plasmid pGBADR-1 indeholder ADRcDNA i fuld længde, som det kan ses ved restriktionsenzym-10 kortlægning og nucleotidsekvensopdeling. En fysisk kortlægning af pGBADR-1 ses på figur 40.The resulting plasmid pGBADR-1 contains full-length ADRcDNA, as can be seen in restriction enzyme mapping and nucleotide sequence division. A physical mapping of pGBADR-1 is shown in Figure 40.
(b) Konstruktion af ekspressionskassetten.(b) Construction of the expression cassette.
Man opnåede en ADRcDNA af fuld længde med modi-15 ficeret flankerende sekvenser til gærekspressionsvektor pGB950 ved PCR metoden (se eksempel 18) med pGBADR-1 som skabelon og to specifikke ADR-oligomere som prime-re.A full-length ADRcDNA with modified flanking sequences for yeast expression vector pGB950 was obtained by the PCR method (see Example 18) with pGBADR-1 as template and two specific ADR oligomers as primers.
Oligomer ADR-4 (5'-CGA GTG TCG ACA AAA ATG TCCOligomer ADR-4 (5'-CGA GTG TCG ACA AAA ATG TCC
20 ACA CAG GAG CAG ACC-3') indeholder 18 baser, der er komplementære til de modne ADRcDNA sekvenser fra position 96 til 114 og 18 baser til indførelse af Sall restriktionssted, et optimalt gærtranslationssignal og et ATG initieringskodon.20 ACA CAG GAG CAG ACC-3 ') contains 18 bases complementary to the mature ADRcDNA sequences from positions 96 to 114 and 18 bases for introducing SalI restriction site, an optimal yeast translation signal and an ATG initiation codon.
25 Oligomer ADR-5 (5' -CGT GCT CGA GGT ACC TCA GTGOligomeric ADR-5 (5 '-CGT GCT CGA GGT ACC TCA GTG
CCC CAG CAG CCG CAG-3') indeholder 18 baser, der er komplementære til minusstrengen af ADRcDNA opstrøms for translationsstopkodonet ved position 1479, og 15 baser til opnåelse af Kpnl og Xhol restriktionssteder for mo-30 lekylær kloning i forskellige ekspressionsvektorer.CCC CAG CAG CCG CAG-3 ') contains 18 bases complementary to the minus strand of ADRcDNA upstream of the translation stop codon at position 1479, and 15 bases to obtain KpnI and XhoI restriction sites for molecular cloning in various expression vectors.
Efter opformering med de ovenfor nævnte skabeloner og ADR primere fordøjede man det opformerede fragment (1,4 kb) med Sall og Xhol og indsatte det ved mo- 61 DK 175573 B1 lekylær kloning i gærekspressionsvektoren pGB950 gennemskåret med Sall og Xhol.After amplification with the above mentioned templates and ADR primers, the amplified fragment (1.4 kb) was digested with SalI and XhoI and inserted by molecular cloning into the yeast expression vector pGB950 cut with SalI and XhoI.
Det heraf afledte plasmid pGBADR-2 ses illustreret på figur 40.The derived plasmid pGBADR-2 is illustrated in Figure 40.
5 (c) Transformation af K. lactis.5 (c) Transformation of K. lactis.
Man gennemskår 15 yg pGBADR-2 ved det unikke SacII-sted i lactasepromotoren og udførte transforma-tioen af K. lactis CBS 23 60 som beskrevet i eksempel .10 5(c).15 µg of pGBADR-2 was cut at the unique SacII site of the lactase promoter and the transformation of K. lactis CBS 23 60 was performed as described in Example .10 5 (c).
Eksempel 26Example 26
Molekylær kloning af en fuld længde cDNA, der koder for 15 bovin NADPH-cytochrom P45Q reduktase (RED).Molecular cloning of a full-length cDNA encoding 15 bovine NADPH cytochrome P45Q reductase (RED).
Man gennemsøgte det bovine binyrebark cDNA bibliotek beskrevet i eksempel 1 med en 32P-mærket syntetisk oligomer 5'-TGC CAG TTC GTA GAG CAC ATT GGT GCG 20 TGG CGG GTT AGT GAT GTC CAG GT-3', der er specifik for en bevaret aminosyreregion hos rotte-, svine- og kanin-RED som beskrevet af Katagari et al. (J. Biochem., 100, 945-954, 1986) og Murakami et al. (DNA, 5, 1-10, 1986).The bovine adrenal cortex cDNA library described in Example 1 was searched with a 32P-labeled synthetic oligomer 5'-TGC CAG TTC GTA GAG CAC ATT GGT GCG 20 TGG CGG GTT AGT GAT GTC CAG GT-3 'specific for a conserved amino acid region in rat, swine and rabbit RED as described by Katagari et al. (J. Biochem., 100, 945-954, 1986) and Murakami et al. (DNA, 5, 1-10, 1986).
Herved opnåede man fem hybridiserende pfu'er og 25 karakteriserede disse yderligere ved restriktionsenzymkortlægning og nucleotidsekvensopdeling. Man indsatte en fuld længde REDcDNA i ekspressionsvektorer og transformerede disse til passende værter som nævnt i eksemplerne 2, 3 og 6.Thereby, five hybridizing PFUs were obtained and further characterized by restriction enzyme mapping and nucleotide sequence division. A full length REDcDNA was inserted into expression vectors and transformed into appropriate hosts as mentioned in Examples 2, 3 and 6.
DK 175573 B1 62DK 175573 B1 62
Eksempel 27Example 27
Konstruktion, transformation og ekspression af en ekspressionskassette, der koder for proteinerne P45QSSC og 5 ADX i gæren Kluyveromyces lactis.Construction, transformation and expression of an expression cassette encoding the proteins P45QSSC and 5 ADX in the yeast Kluyveromyces lactis.
(a) Konstruktion af ekspressionskassetten.(a) Construction of the expression cassette.
Man fordøjede ekspressionskassetten pGBADX-1 (se eksempel 23) med SacII og Hindlll (delvis) og udfyldte 10 klæbende ender under anvendelse af Klenow DNA polymerase. DNA fragmentet, der omfattede en del af lactase-promotoren (der stadig fungerede), den kodende ADX sekvens og lactaseterminatoren blev fraskilt og isoleret ved agarosegelelektroforese og derefter indsat i 15 pGBSCC-7, der først blev lineariseret ved Xbal fordøjelse (se eksempel 5(b)) og fik klæbende ender udfyldt under anvendelse af Klenow DNA polymerase. Konstruktionen blev foretaget på en sådan måde, at man opnåede et unikt restriktionssted (SacII), der er nødvendigt for 20 at overføre plasmidet til K. lactis.The expression cassette pGBADX-1 (see Example 23) was digested with SacII and HindIII (partially) and filled 10 adhesive ends using Klenow DNA polymerase. The DNA fragment comprising a portion of the lactase promoter (still functioning), the coding ADX sequence and the lactase terminator were separated and isolated by agarose gel electrophoresis and then inserted into 15 pGBSCC-7 first linearized by XbaI digestion (see Example 5 ( b)) and had adhesive ends filled using Klenow DNA polymerase. The construction was carried out in such a way as to obtain a unique restriction site (SacII) necessary to transfer the plasmid to K. lactis.
Dette unikke SacII restriktionssted findes i lactasepromotersekvensen, der flankerer SCC sekvensen, idet SacII restriktionsstedet i lactasepromoteren, der flankerer ADX sekvensen, bliver ødelagt ved udfyldnin-2 5 gen.This unique SacII restriction site is found in the lactase promoter sequence flanking the SCC sequence, with the SacII restriction site in the lactase promoter flanking the ADX sequence being destroyed by the fill-in gene.
Den opnåede ekspressionskassette pGBSCC/ADX-1 indeholder både den kodende sekvens for SCC og for ADX, og de drives begge af lactasepromoteren. 1 (b) Transformation af K. lactis.The obtained expression cassette pGBSCC / ADX-1 contains both the coding sequence for SCC and for ADX, and they are both driven by the lactase promoter. 1 (b) Transformation of K. lactis.
Man udførte transformation af K. lactis CBS 2360 som beskrevet i eksempel 5(c) med 15 yg pGBSCC/ADX-1, lineariseret ved det unikke SacII restriktionssted. Man 63 DK 175573 B1 udvalgte en transformant (SCC/ADX-101) for SCC og ADX ekspressionsstudier.Transformation of K. lactis CBS 2360 was performed as described in Example 5 (c) with 15 µg pGBSCC / ADX-1, linearized at the unique SacII restriction site. Man 63 DK 175573 B1 selected a transformant (SCC / ADX-101) for SCC and ADX expression studies.
(c) Analyse af transformanten K. lactis SCC/ADX-101.(c) Analysis of the transformant K. lactis SCC / ADX-101.
5 Man fremstillede cellulære proteinfraktioner fra kulturer af SCC/ADX-101 og kontrolstammen CBS 2360 som beskrevet i eksempel 5(d) og analyserede disse ved SDS/PAGE og Western blot. Man sondeundersøgte blottet med antistoffer, der var specifikke for henholdsvis SCC 10 og ADX. Ved sammenligning med kontrolstammen opviser det cellulære proteinfraktion fra transformanten SCC/ADX 101 to yderligere bånd med den ventede længde (henholdsvis 53 og 14 kDa), hvilket viser ekspression af begge proteiner SCC og ADX. Ekspressionsniveauer for 15 begge proteiner i transformanten SCC/ADX-101 er sammenlignelige med niveauer observeret hos transformanter, der kun eksprimerer ét protein (for SCC se figur 15A, bane 3, og for ADX figur 39, bane 5).Cellular protein fractions from cultures of SCC / ADX-101 and the control strain CBS 2360 were prepared as described in Example 5 (d) and analyzed by SDS / PAGE and Western blot. Problems were probed with antibodies specific for SCC 10 and ADX, respectively. When compared to the control strain, the cellular protein fraction of the transformant SCC / ADX 101 exhibits two additional expected length bands (53 and 14 kDa, respectively), showing expression of both proteins SCC and ADX. Expression levels for both proteins in the transformant SCC / ADX-101 are comparable to levels observed in transformants expressing only one protein (for SCC see Figure 15A, lane 3, and for ADX Figure 39, lane 5).
In vitro SCC og ADX aktivitet af transformant 20 SCC/ADX-101 ses beskrevt i eksempel 28.In vitro SCC and ADX activity of transformant SCC / ADX-101 are described in Example 28.
Eksempel 28Example 28
In vitro aktivitet af P450SSC og adrenodoxin opnået fra 25 Kluyveromyces lactis SCC/ADX-101.In vitro activity of P450SSC and adrenodoxin obtained from 25 Kluyveromyces lactis SCC / ADX-101.
Man dyrkede K. lactis SCC/ADX-101 opnået som beskrevet i eksempel 27 og kontrolstamme K. lactis SCC-101 som beskrevet i eksempel 5(d) ill YEPD medium 30 (1% gærekstrakt, 2% pepton, 2% glucose, monohydrat) med indhold af 100 mg l"1 geneticin (G418 sulfat; Gibco Ltd.), i 72 timer ved 30 C. Cellerne blev fracentrifugeret (4000 g, 15 minutter), suspenderet i en fysiolo- 64 DK 175573 B1K. lactis SCC / ADX-101 obtained as described in Example 27 and control strain K. lactis SCC-101 as described in Example 5 (d) in YEPD medium 30 (1% yeast extract, 2% peptone, 2% glucose, monohydrate) were grown. ) containing 100 mg of l "1 geneticin (G418 sulfate; Gibco Ltd.), for 72 hours at 30 ° C. The cells were centrifuged (4000 g, 15 minutes), suspended in a physiologic solution.
gisk saltopløsning og vasket med en phosphatpuffer (pHbrine and washed with a phosphate buffer (pH
7.5, 75 mM) . Efter centrifugering (4000 g, 15 minutter), suspenderede man pelleten i en phosphatpuffer (pH7.5, 75 mM). After centrifugation (4000 g, 15 minutes), the pellet was suspended in a phosphate buffer (pH
7.5, 75 mM) til opnåelse af en suspension, der inde-5 holdt 0,5 g våd cellevægt pr. ml. Cellerne blev sprængt under anvendelse af Braun MSK Homogenizer (6 x 15 sekunder, 0,45-0,50 mm glasperler). Hele celler blev fjernet ved centrifugering (4000 g, 15 minutter).7.5, 75 mM) to obtain a suspension containing 0.5 g wet cell weight per ml. ml. The cells were disrupted using Braun MSK Homogenizer (6 x 15 seconds, 0.45-0.50 mm glass beads). Whole cells were removed by centrifugation (4000 g, 15 minutes).
Man foretog analyse for aktiviteten af protein-komplekset P45qSSC/ADX i de cellefrie ekstrakter, idet man bestemte den sidekædespaltende reaktion i cholesterol under tilstedeværelse af NADPH og ADR. Assayblan-dingen bestod af følgende opløsninger:Assay was performed for the activity of the P45qSSC / ADX protein complex in the cell-free extracts, determining the side-chain cleavage reaction in cholesterol in the presence of NADPH and ADR. The assay mixture consisted of the following solutions:
Opløsning A (naturlig P450SSC elektrondonerende 15 system med undtagelse af ADX): en 50 mM kaliumphosphat-puffer (pH 7,0), indeholdende 3 mM EDTA, 2 yM adrenodo-xinreduktase (oprenset fra bovin binyrebark), 1 mM NADPH (elektrondonor), 15 mM glucose-6-phosphat og 16 enheder/ml glucose-6-phosphat-dehydrogenase (NADPH 20 regenereringssystem).Solution A (natural P450SSC electron donating system with the exception of ADX): a 50 mM potassium phosphate buffer (pH 7.0) containing 3 mM EDTA, 2 µM adrenodo-xine reductase (purified from bovine adrenal cortex), 1 mM NADPH (electron donor) , 15 mM glucose-6-phosphate and 16 units / ml glucose-6-phosphate dehydrogenase (NADPH 20 regeneration system).
Opløsning B (substrat): en micelleopløsning af 37,5 yM cholesterol (dobbelt radiomærket med [26,27-14C] cholesterol (40 Ci/mol) og [7a-3H] cholesterol (400 Ci/mol)) i 10% (v/v) Tergitol NP 40/ethanol 25 (1:1, v/v).Solution B (substrate): a micelle solution of 37.5 µM cholesterol (double radiolabelled with [26.27-14C] cholesterol (40 Ci / mol) and [7a-3H] cholesterol (400 Ci / mol)) in 10% ( v / v) Tergitol NP 40 / ethanol (1: 1, v / v).
Man startede assayet ved at blande 75 yl af opløsning A med 50 yl opløsning B og med 125 yl af cellefri ekstrakt. Blandingen blev holdt under blid omrøring ved 30°C, og man udtog prøver efter 60 minutters inku-30 bering og fortyndede disse med 100 yl vand. Fra en prøve ekstraherede man substrat og produkt eller produkter med 100 yl methanol og 150 yl chloroform. Efter centrifugering (5000 g, 2 minutter) samlede man chloroformla- 65 DK 175573 B1 get og tørrede det. Den tørrede remanens blev opløst i 50 μΐ acetone med indhold af 0,5 mg af en steroidblanding (cholesterol, pregnenolon og progesteron (1:1:1, 5 w/w/w)), hvorefter man tilsatte 110 μΐ koncentreret myresyre.The assay was started by mixing 75 µl of solution A with 50 µl of solution B and with 125 µl of cell-free extract. The mixture was kept under gentle stirring at 30 ° C and samples were taken after 60 minutes of incubation and diluted with 100 µl water. From a sample, substrate and product or products were extracted with 100 µl methanol and 150 µl chloroform. After centrifugation (5000 g, 2 minutes), the chloroform layer was collected and dried. The dried residue was dissolved in 50 μΐ acetone containing 0.5 mg of a steroid mixture (cholesterol, pregnenolone and progesterone (1: 1: 1, 5 w / w / w)), then 110 μΐ concentrated formic acid was added.
00
Suspensionen blev opvarmet til 120 C i 15 minutter. Derefter bestemte man forholdet 14C/3H ved dobbelt mærket væskescintillationstælling. Dette for-10 hold er et direkte mål for den sidekædespaltende reaktion, idet den 14C-mærkede sidekæde bortfordampes fra blandingen som isocaprylsyre under opvarmningen.The suspension was heated to 120 ° C for 15 minutes. Then the ratio of 14C / 3H was determined by double labeled liquid scintillation counting. This ratio is a direct measure of the side-chain cleavage reaction, with the 14C-labeled side chain evaporating from the mixture as isocaprylic acid during heating.
Under anvendelse af dette assay kunne man påvise cholesterol sidekædespaltende aktivitet i den cellefrie 15 ekstrakt fra K. lactis SCC/adx-101, hvorimod man ikke kunne påvise nogen aktivitet i den cellefrie ekstrakt fra K. lactis SCC-101.Using this assay, cholesterol side chain cleavage activity was detected in the K. lactis SCC / adx-101 cell-free extract, whereas no activity in the K. lactis SCC-101 cell-free extract was detected.
ved hjælp af HPLC-analyse kunne man identificere reaktionsproduktet og frembragt af en cellefri ekstrakt 20 af K. lactis SCC/ADX-101 som pregnenolon.HPLC analysis could identify the reaction product and produced a cell-free extract 20 of K. lactis SCC / ADX-101 as a pregnenolone.
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EP88200904 | 1988-05-06 | ||
EP88200904 | 1988-05-06 | ||
EP88202080 | 1988-09-23 | ||
EP88202080 | 1988-09-23 | ||
PCT/NL1989/000032 WO1989010963A1 (en) | 1988-05-06 | 1989-05-08 | Process for the biochemical oxidation of steroids and genetically engineered cells to be used therefor |
NL8900032 | 1989-05-08 |
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DK264890D0 DK264890D0 (en) | 1990-11-05 |
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DK175573B1 true DK175573B1 (en) | 2004-12-13 |
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JP (2) | JP2963711B2 (en) |
KR (1) | KR100256025B1 (en) |
CN (1) | CN1038667A (en) |
AT (1) | ATE201235T1 (en) |
AU (1) | AU635494B2 (en) |
CA (1) | CA1340616C (en) |
DE (1) | DE68929296T2 (en) |
DK (1) | DK175573B1 (en) |
ES (1) | ES2157883T3 (en) |
FI (1) | FI109605B (en) |
HU (1) | HU217411B (en) |
IL (1) | IL90207A (en) |
NO (1) | NO314267B1 (en) |
NZ (1) | NZ229032A (en) |
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CN1042567A (en) * | 1988-09-23 | 1990-05-30 | 吉斯特-布罗卡迪斯公司 | Steroid multistep method for oxidation and used genetically engineered cell |
DE69122016T2 (en) * | 1990-09-26 | 1997-04-30 | Sumitomo Chemical Co | Mitochondrial P450 |
US5240831A (en) * | 1991-01-10 | 1993-08-31 | Board Of Regents, The University Of Texas | Methods and compositions for the expression of biologically active eukaryotic cytochrome p45os in bacteria |
US5420027A (en) * | 1991-01-10 | 1995-05-30 | Board Of Regents, The University Of Texas System | Methods and compositions for the expression of biologically active fusion proteins comprising a eukaryotic cytochrome P450 fused to a reductase in bacteria |
GB9615032D0 (en) | 1996-07-17 | 1996-09-04 | Univ Dundee | Enzyme system |
US9255256B2 (en) | 1996-07-17 | 2016-02-09 | Btg International Limited | Expression of functional cytochorome P450 monooxygenase system in enterobacteria |
FR2820145B1 (en) * | 2001-01-31 | 2004-01-23 | Aventis Pharma Sa | YEAST STRAIN PRODUCING INDEPENDENT STEROIDS |
US20120178124A1 (en) * | 2009-01-07 | 2012-07-12 | Mitsubishi Chemical Corporation | Sterol side chain-cleaving enzyme protein and use thereof |
SG11201509965YA (en) * | 2013-06-17 | 2016-01-28 | Sanofi Sa | Whole-cell system for cytochrome p450 monooxygenases biocatalysis |
DK3097113T3 (en) * | 2014-01-20 | 2019-04-23 | Sanofi Sa | HOW TO UNKNOWN CYTOCHROM P450 POLYPEPTIDE WITH INCREASED ENZYMATIC ACTIVITY |
JP5800040B2 (en) * | 2014-01-29 | 2015-10-28 | 三菱化学株式会社 | Sterol side chain cleaving enzyme protein and use thereof |
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KR900702022A (en) | 1990-12-05 |
DE68929296T2 (en) | 2001-12-06 |
KR100256025B1 (en) | 2000-05-01 |
IL90207A (en) | 1994-07-31 |
JPH11308991A (en) | 1999-11-09 |
AU635494B2 (en) | 1993-03-25 |
NZ229032A (en) | 1992-06-25 |
JPH04500303A (en) | 1992-01-23 |
CN1038667A (en) | 1990-01-10 |
ES2157883T3 (en) | 2001-09-01 |
IL90207A0 (en) | 1989-12-15 |
NO904791L (en) | 1991-01-04 |
DE68929296D1 (en) | 2001-06-21 |
ATE201235T1 (en) | 2001-06-15 |
PT90484B (en) | 1994-08-31 |
JP2963711B2 (en) | 1999-10-18 |
CA1340616C (en) | 1999-06-29 |
HUT54413A (en) | 1991-02-28 |
HU217411B (en) | 2000-01-28 |
FI109605B (en) | 2002-09-13 |
DK264890D0 (en) | 1990-11-05 |
FI905464A0 (en) | 1990-11-05 |
NO314267B1 (en) | 2003-02-24 |
PT90484A (en) | 1989-11-30 |
AU3575989A (en) | 1989-11-29 |
WO1989010963A1 (en) | 1989-11-16 |
DK264890A (en) | 1990-11-05 |
NO904791D0 (en) | 1990-11-05 |
HU893289D0 (en) | 1990-12-28 |
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