DK164283B - POLYPEPTIDE WITH CYSTATIN C ACTIVITY, DNA SEQUENCE FOR EXPRESSION OF 3-DES-OH CYSTATIN C OR A MODIFICATION THEREOF, PROCEDURES FOR THE PREPARATION OF 3-DES-HYDROXY-CYSTATINE MELDOMMANE MADRIDME OR MADIFICANE MADRIDME USE OF 3-DES-OH CYSTATIN C OR ITS MODIFICATION FOR THE PREPARATION OF A THERAPEUTIC PREPARATION - Google Patents
POLYPEPTIDE WITH CYSTATIN C ACTIVITY, DNA SEQUENCE FOR EXPRESSION OF 3-DES-OH CYSTATIN C OR A MODIFICATION THEREOF, PROCEDURES FOR THE PREPARATION OF 3-DES-HYDROXY-CYSTATINE MELDOMMANE MADRIDME OR MADIFICANE MADRIDME USE OF 3-DES-OH CYSTATIN C OR ITS MODIFICATION FOR THE PREPARATION OF A THERAPEUTIC PREPARATION Download PDFInfo
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DK 164283 BDK 164283 B
Den foreliggende opfindelse angår et polypeptid med cystatin C aktivitet og en DNA-sekvens til udtrykkelse af 3-des-OH-cystatin C eller en modifikation deraf. Endvidere angår opfindelsen en fremgangsmåde til fremstilling af 5 3-des-hydroxy-cystatin C eller en modifikation deraf samt et plasmid og en mikroorganisme til udøvelse af fremgangsmåden. Endelig angår opfindelsen anvendelsen af 3-des-OH-cystatin C eller en modifikation deraf til fremstilling af et terapeutisk præparat.The present invention relates to a polypeptide having cystatin C activity and a DNA sequence to express 3-des-OH-cystatin C or a modification thereof. Furthermore, the invention relates to a process for the preparation of 3-des-hydroxy-cystatin C or a modification thereof, and to a plasmid and a microorganism for carrying out the process. Finally, the invention relates to the use of 3-des-OH-cystatin C or a modification thereof for the preparation of a therapeutic composition.
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Det omhandlede 3-des-OH-cystatin C er et protein med 120 aminosyrer.The present 3-des-OH-cystatin C is a protein with 120 amino acids.
Aminosyresekvensen er følgende: 15The amino acid sequence is as follows:
Ser-Ser-Pro-Gly-Lys-Pro-Pro-Arg-Leu-Val-Gly-Gly-Pro-Met-Asp-Ala-Ser-Val-Glu-Glu-Glu-Gly-Val-Arg-Arg-Ala-Leu-Asp-Phe-Ala-Val-Gly-Glu-Tyr-Asn-Lys-Ala-Ser-Asn-Asp-Met-Tyr-Mis-Ser-Arg-Ala-Leu-Gln-Val-Val-Arg-Ala-Arg-Lys-Gln-Ile-20 Val-Ala-Gly-Val-Asn-Tyr-Phe-Leu-Asp-Val-Glu-Leu-Gly-Arg-Ser-Ser-Pro-Gly-Lys-Pro-Pro-Arg-Leu-Val-Gly-Gly-Pro-Met-Asp-Ala-Ser-Val-Glu-Glu-Glu-Gly-Val-Arg-Arg Ala-Leu-Asp-Phe-Ala-Val-Gly-Glu-Tyr-Asn-Lys-Ala-Ser-Asn-Asp-Met-Tyr-Mis-Ser-Arg-Ala-Leu-Gln-Val-Val- Arg-Ala-Arg-Lys-Gln-Ile-20 Val-Ala-Gly-Val-Asn-Tyr-Phe-Leu-Asp-Val-Glu-Leu-Gly-Arg
Thr-Thr-Cys-Thr-Lys-Thr-Gln-Pro-Asn-Leu-Asp-Asn-Cys-Pro-Phe-His-Asp-Gln-Pro-Mis-Leu-Lys-Arg-Lys-Ala-Phe-Cys-Ser-Phe-Gln-ile-Tyr-Ala-Val-Pro-Trp-Gln-Gly-Thr-Met-Thr-Leu-Ser-Lys-Ser-Thr-Cys-Gln-Asp-Ala 25Thr-Thr-Cys-Thr-Lys-Thr-Gln-Pro-Asn-Leu-Asp-Asn-Cys-Pro-Phe-His-Asp-Gln-Pro-Mis-Leu-Lys-Arg-Lys-Ala- Phe-Cys-Ser-Phe-Gln-ile-Tyr-Ala-Val-Pro-Trp-Gln-Gly-Thr-Met-Thr-Leu-Ser-Lys-Ser-Thr-Cys-Gln-Asp-Ala 25
Nativt humant cystatin C, der er isoleret fra urin og renset, er kendt, og aminosyresekvensen er bestemt (1) efter fragmentering af polypeptidkæden ved dels cyanogen-bromid-behandling dels trypsinspaltning. Ved bestemmelsen 30 blev det konstateret, at aminosyren i position 3 (Pro) er hydroxyleret i en grad på omkring 50%, men noget varierende. Cystatin C består således af to næsten lige store og meget nær ens komponenter, hvoraf den ene er hydroxyleret i position 3 (Pro) medens den anden (3-des-OH-35 cystatin) ikke er det. Dette forhold har hidtil ikke været tillagt nogen betydning, og cystatin C har derfor været brugt og studeret i den kendte form.Native human cystatin C isolated from urine and purified is known and the amino acid sequence is determined (1) after fragmentation of the polypeptide chain by both cyanogen-bromide treatment and trypsin cleavage. In determination 30, it was found that the amino acid at position 3 (Pro) is hydroxylated to a degree of about 50%, but somewhat varying. Thus, cystatin C consists of two nearly equal and very close components, one of which is hydroxylated at position 3 (Pro) while the other (3-des-OH-35 cystatin) is not. This relationship has so far been of no importance and therefore cystatin C has been used and studied in the known form.
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Ifølge den foreliggende opfindelse er de to komponenter blevet adskilt, og det har overraskende vist sig, at den biologiske effekt alene er knyttet til komponenten 3-des-OH-cystatin C.According to the present invention, the two components have been separated and, surprisingly, it has been found that the biological effect is associated solely with the component 3-des-OH-cystatin C.
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Som det fremgår af litteraturen er cystatin C en effektiv inhibitor for cystein-proteinaser, bl.a. papain og cath-epsin B.As can be seen in the literature, cystatin C is an effective inhibitor of cysteine proteinases, i.a. papain and cath-epsin B.
10 Således er cystatin C i form af human cystatin C, også kaldet human r-trace, beskrevet af Grubb et al., (1), som angiver aminosyresekvensen og beskriver nogle biologiske egenskaber.Thus, cystatin C in the form of human cystatin C, also called human r-trace, is described by Grubb et al. (1), which indicates the amino acid sequence and describes some biological properties.
15 Cystein-proteinaser deltager i den intracellulære catabo-lisme af proteiner og peptider, i den proteolytiske omsætning af prohormoner, i den ekstracellulære nedbrydning af collagen og i penetrering af normalt væv med maligne celler.Cysteine proteinases participate in the intracellular catabolism of proteins and peptides, in the proteolytic reaction of prohormones, in the extracellular degradation of collagen and in the penetration of normal tissue by malignant cells.
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Da cystatin C og dermed også 3-des-OH-cystatin C hæmmer cystein-proteinaser, som fremmer cancervækst eller metastase-dannelse, er det et potentielt cancerhæmmende middel.Since cystatin C and thus also 3-des-OH-cystatin C inhibits cysteine proteinases that promote cancer growth or metastasis formation, it is a potential anticancer agent.
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Endvidere har cystatin C og dermed også 3-des-OH-cystatin C vist sig i besiddelse af antiviral og muligvis antibak-teriel aktivitet. 1 2 3 4 5 6Furthermore, cystatin C and thus also 3-des-OH-cystatin C have been shown to possess antiviral and possibly antibacterial activity. 1 2 3 4 5 6
Til behandling af diskusprolaps kan anvendes cystein-pro 2 teinaser, f.eks. chymopapain. Hvis disse cystein-protein 3 aser diffunderer ud i cerebrospinalvæsken, opstår hjerne 4 blødning som en alvorlig bivirkning i forbindelse med den 5For the treatment of disc prolapse, cysteine pro 2 teinases, e.g. chymopapain. If these cysteine protein 3 axes diffuse into the cerebrospinal fluid, brain 4 bleeding occurs as a serious side effect associated with the 5
terapeutiske behandling af diskusprolaps. Da cystatin Ctherapeutic treatment of disc prolapse. When cystatin C
6 og dermed også 3-des-OH-cystatin C forebygger en sådan bivirkning, har det terapeutisk anvendelse til dette formål.6 and thus also 3-des-OH-cystatin C prevents such a side effect, it has therapeutic use for this purpose.
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Af særlig betydning er aktiviteten af cystatin C til behandling af axrvelig tilbøjelighed til hjerneblødning med amyloidosis. Ved visse typer af denne sygdom er fundet aflejringer af et såkaldt HCHWA amyloid protein (Proc.Of particular importance is the activity of cystatin C in the treatment of cerebral prone brain amyloidosis. In certain types of this disease, deposits of a so-called HCHWA amyloid protein (Proc.
5 Natl. Acad. Sci. Vol 83. pp 2974-2978, May 1986 og Bio-chem. Biophys. Res. Commun. 1986, 136,548-554). Dette protein har vist sig at være en variant af cystatin C, idet det mangler de 10 første aminosyrer af cystatin C s sekvens medens cystatin C s aminosyre Leu i position 68, 10 i HCHWA proteinets tilsvarende position 58 er erstattet med aminosyren Gin. Det formodes at denne variant af cystatin C har forbindelse med og måske er ansvarlig for sygdommen. I så fald må det forventes at 3-des-OH-cysta-tin C vil være anvendelig til behandling af denne sygdom.5 Natl. Acad. Sci. Vol 83. pp 2974-2978, May 1986 and Biochem. Biophys. Res. Commun. 1986, 136,548-554). This protein has been found to be a variant of cystatin C in that it lacks the first 10 amino acids of the cystatin C sequence while cystatin C s amino acid Leu at position 68, 10 of the HCHWA protein's corresponding position 58 is replaced by the amino acid Gin. It is believed that this variant of cystatin C is associated with and perhaps responsible for the disease. In that case, it is to be expected that 3-des-OH cysteine T will be useful in the treatment of this disease.
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Ved nedbrydning af collagen i bindevæv deltager bl.a. cy-stein-proteinaser, og 3-des-0H-cystatin C kan derfor formentlig hæmme en sådan nedbrydning af bindevæv.In the breakdown of collagen in connective tissue, i.a. cysteine proteinases, and therefore 3-des-OH-cystatin C may probably inhibit such degradation of connective tissue.
20 Aminosyresekvensen af cystatin C, isoleret fra human urin, er bestemt og har vist sig at have en vis homolog! med c-Ha-ras oncogenprodukter.The amino acid sequence of cystatin C, isolated from human urine, has been determined and has been shown to have a certain homologue! with c-Ha-ras oncogene products.
Opfindelsen er baseret på anvendelsen af en hidtil ukendt 25 DNA-sekvens, der indeholder kodoner, som koder for 3-des-OH-cystatin C eller modifikationer deraf. DNA-sekvensen kan være en cDNA-sekvens, som er dannet ud fra humane celler fra placenta, og som har den i krav 2 angivne struktur.The invention is based on the use of a novel DNA sequence containing codons encoding 3-des-OH-cystatin C or modifications thereof. The DNA sequence can be a cDNA sequence formed from placental human cells and having the structure of claim 2.
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Endvidere angår opfindelsen modificeret 3-des-OH-cystatin C, hvori en eller flere aminosyrer i positionerne 5-17 og/eller 55-59 er skiftet ud med en anden aminosyre. Et eksempel på et sådant modificeret 3-des-OH-cystatin C er 35 et derivat, hvor Gly i position 11 er ændret til Arg.Furthermore, the invention relates to modified 3-des-OH-cystatin C, wherein one or more amino acids at positions 5-17 and / or 55-59 are replaced by another amino acid. An example of such a modified 3-des-OH-cystatin C is a derivative wherein Gly at position 11 is changed to Arg.
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Ved fremgangsmåden ifølge opfindelsen til fremstilling af 3-des-hydroxy-cystatin C eller et modificeret 3-des-OH-cystatin C benyttes en værtsorganisme, såsom en bakterie, en gærcelle eller en mammal cellelinie, hvori der er op-5 taget en vektor, såsom et plasmid, med den for udtrykkel-se af 3-des-OH-cystatin C eller et modificeret 3-des-OH-cystatin C egnede struktur.In the process of the invention for the preparation of 3-des-hydroxy-cystatin C or a modified 3-des-OH-cystatin C, a host organism such as a bacterium, a yeast cell or a mammalian cell line in which a vector is used is used. , such as a plasmid, having the structure suitable for expression of 3-des-OH-cystatin C or a modified 3-des-OH-cystatin C.
Den omhandlede DNA-sekvens indsættes sammen med signalse-10 kvenser, promotorer m.m. i et plasmid, der inkorporeres i mikroorganismen, som derefter dyrkes på i og for sig kendt måde.The DNA sequence in question is inserted together with signal sequences, promoters and more. into a plasmid that is incorporated into the microorganism, which is then cultured in a manner known per se.
Ved fremgangsmåden ifølge opfindelsen dyrkes en værtsor-15 ganisme indeholdende en DNA-sekvens, der koder for 3-des-OH-cystatin C, i et substrat, hvorefter det dannede poly-peptid udvindes af dyrkningsmediet. Den foretrukne værtsorganisme er E. coli, men principielt kan en vilkårlig mikroorganisme anvendes, herunder gærceller, eller dyrk-20 ningen kan ske ved hjælp af mammale celler.In the method of the invention, a host organism containing a DNA sequence encoding 3-des-OH-cystatin C is grown in a substrate, after which the polypeptide formed is recovered by the culture medium. The preferred host organism is E. coli, but in principle any microorganism can be used, including yeast cells, or the culture can be done by mammalian cells.
Det dannede 3-des-OH-cystatin C udvindes af dyrkningsmediet i ren tilstand på i og for sig kendt måde, såsom ved ekstraktion med opløsningsmidler og oprensning ved hjælp 25 af kromatografi. Affinitetskromatografi med monoklonale eller polyklonale antistoffer har vist sig særlig egnet til isolering af 3-des-OH-cystatin C i ren tilstand.The resulting 3-des-OH-cystatin C is recovered by the culture medium in a pure state in a manner known per se, such as by extraction with solvents and purification by chromatography. Affinity chromatography with monoclonal or polyclonal antibodies has proven particularly suitable for isolation of 3-des-OH-cystatin C in a pure state.
Isolering og analyse af cDNA kloner er sket ved screening 30 af rekombinant phager. Der er således benyttet xgtll cDNA bibliotek fra human placenta og lever mRNA. Der er udført screening ved en densitet på 50.000 plaques pr. 130 mm Petri-skåle med affinitet-renset antistof ved en fremgangsmåde ifølge Young og Davis. Bundet antistof blev på-35 vist med alkalisk phosphatase-konjugeret antistof (Promega Bioteknik).Isolation and analysis of cDNA clones was done by screening 30 of recombinant phages. Thus, xgt11 cDNA library from human placenta and liver mRNA is used. Screening has been performed at a density of 50,000 plaques per 130 mm Petri dishes with affinity purified antibody by a method of Young and Davis. Bound antibody was detected with alkaline phosphatase-conjugated antibody (Promega Biotechnology).
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λ-phager, fremstillet ved pladelysat-metoden, blev isoleret ved centrifugering i en CsCl gradient. DNA blev ekstraheret ved standard metodologi. En blandet oligonucleo-tid probe, som var specifik for 3-des-OH-cystatin C, blev 5 hybridiseret til det med EcoRI reagerede produkt af phag DNA ved et Southern blot eksperiment. Hybridiserende cDNA indsætning blev ligeret i EcoRI-lineariseret pUCC18 plasmid vektorer, som derefter blev anvendt til transformering af E. coli JM83 celler. Plasmider blev fremstillet 10 ved alkalisk lysis-metode. DNA-sekventering af indsætninger, subklonet i M13mp8, udførtes under anvendelse af en modificeret dideoxy-kæde terminatorteknik.λ phages, prepared by the plate lysate method, were isolated by centrifugation in a CsCl gradient. DNA was extracted by standard methodology. A mixed oligonucleotide probe specific for 3-des-OH-cystatin C was hybridized to the EcoRI-reacted product of phage DNA in a Southern blot experiment. Hybridizing cDNA insertion was ligated into EcoRI-linearized pUCC18 plasmid vectors, which were then used to transform E. coli JM83 cells. Plasmids were prepared by alkaline lysis method. DNA sequencing of inserts, subcloned into M13mp8, was performed using a modified dideoxy chain terminator technique.
Opfindelsen beskrives i det følgende ved hjælp af tegnin-15 gen, hvor fig. 1 illustrerer en sekventeringsstrategi for human 3-des-OH-cystain C cDNA-indsætninger, 20 fig. 2 viser plasmidet pUC18/C6a, fig. 3 viser plasmiderne pHD162 og pHD262, fig. 4 viser plasmidet pH0313, og 25 fig. 5 er et diagram, som viser vækstkurver for herpes simplex vins type 1 i nærvær af rekombinant 3-des-OH-cy-stain C sammenlignet med kendte antivirale midler. 1 35The invention will now be described by way of example, in which: FIG. Figure 1 illustrates a sequencing strategy for human 3-des-OH cysteine C cDNA inserts; 2 shows the plasmid pUC18 / C6a; FIG. 3 shows the plasmids pHD162 and pHD262; 4 shows the plasmid pH0313, and FIG. Figure 5 is a diagram showing growth curves of type 1 herpes simplex wine in the presence of recombinant 3-des-OH cysteine C compared to known antiviral agents. 1 35
Endvidere er opfindelsen illustreret i det efterfølgende ved hjælp af nogle udførelseseksempler.Furthermore, the invention is illustrated below by means of some exemplary embodiments.
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6 EKSEMPEL 1EXAMPLE 1
Konstruktion af et cDNA, der koder for 3-des-OH-cystatin CConstruction of a cDNA encoding 3-des-OH-cystatin C
5 cDNA bibliotek fra humane celler af lever, prostata og placenta blev screenet for 3-des-OH-cystatin C kodende kloner. Ca. 1,2 x 10^ rekombinanter af lever-celler og 3 5 x 10 rekombinanter af prostataceller blev screenet med antistoffer og en blandet oligonucleotid probe. Resulta-10 tet af denne screening var negativt. Derimod gav scree- 5 ning af 6 x 10 rekombinanter af placentaceller ni kloner, der reagerede med antistoffet.Five cDNA library from human cells of liver, prostate and placenta were screened for 3-des-OH-cystatin C coding clones. Ca. 1.2 x 10 5 recombinants of liver cells and 35 x 10 5 recombinants of prostate cells were screened with antibodies and a mixed oligonucleotide probe. The result of this screening was negative. In contrast, screening of 6 x 10 6 placental recombinants yielded nine clones that reacted with the antibody.
Tre af disse kloner, betegnet henholdsvis C5, C6a og C12, 15 blev benyttet i det følgende. Deres indsætninger af henholdsvis 800, 800 og 700 basepar, hybridiseredes specifikt ved Southern blot eksperimenter til et blandet oligonucleotid, konstrueret fra protein-sekvens-data.Three of these clones, designated C5, C6a and C12, respectively, were used below. Their insertions of 800, 800, and 700 base pairs, respectively, were hybridized specifically by Southern blot experiments to a mixed oligonucleotide constructed from protein sequence data.
20 Ved sekventering af indsætninger fra kloner C6a og C12, subklonet i EcoRI-skåret M13mp8, afsløredes at indsætningerne delte samme 3'-sekvens, indeholdende polyadenyle-ringssignalet AATAAA.By sequencing insertions from clones C6a and C12, subcloned into EcoRI cut M13mp8, it was revealed that the inserts shared the same 3 'sequence containing the polyadenylation signal AATAAA.
25 Hele sekvensen af begge strenge af klonen C6a cDNA indsætning blev bestemt ved sekventering af tilfældigt overlappende fragmenter, subklonet i M13mp8. Data opnået ved sekventering af cDNA indsætninger af kloner C6a og C12 fra enderne afslørede, at sekvensen af C12 indsætninger 30 starter ved position 91 af den for C6a, se fig. 1.The entire sequence of both strands of the clone C6a cDNA insert was determined by sequencing randomly overlapping fragments, subcloned into M13mp8. Data obtained by sequencing cDNA inserts of clones C6a and C12 from the ends revealed that the sequence of C12 inserts 30 starts at position 91 of that of C6a, see FIG. First
C6a indsætningen indeholder 777 basepar, inklusiv 77 basepar af 5’-ikke-kodende sekvens, og 262 basepar af 3'-ikke-kodende sekvens. Polyadenyleringssignalet AATAAA ved 35 position 756-761 er efterfulgt af 15 nucleotider. En mulig translations-initiering i overensstemmelse med den af Kozak fundne sekvens findes 6 bp nedstrøms en stop-kodon.The C6a insert contains 777 base pairs, including 77 base pairs of 5 'non-coding sequence, and 262 base pairs of 3' non-coding sequence. The polyadenylation signal AATAAA at position 756-761 is followed by 15 nucleotides. A possible translation initiation in accordance with the sequence found by Kozak is found 6 bp downstream of a stop codon.
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Initiering ved denne position og translationsstop ved TAG-koden i positionerne 516-518 vil resultere i et 120 aminosyrer langt 3-des-0H-cystatin C med en signalsekvens på 26 aminosyrerester. Det dannede polypeptid viste sig 5 at have højere aktivitet end et tilsvarende humant cysta-tin C isoleret fra urin.Initiation at this position and translation stops at the TAG code at positions 516-518 will result in a 120 amino acid long 3-des-OH-cystatin C with a signal sequence of 26 amino acid residues. The polypeptide formed was found to have higher activity than a corresponding human cysteine C isolated from urine.
Som det fremgår af fig. 1 blev i human 3-des-OH-cystatin C cDNA-indsætninger af klonerne C12 og C6a sekventeret 10 fra enderne ved kæde-terminator-metoden. En "shotgun" se-kventerings-analyseteknik blev anvendt til sekventering af begge DNA-strenge af C6a indsætninger. De vandrette pile angiver retningen og udstrækningen af hver sekvensanalyse. Protein-kodningsområdet for indsat C6a er ind-15 rammet, og den skraverede del viser området, som koder for modent protein.As shown in FIG. 1, in human 3-des-OH-cystatin C cDNA inserts of clones C12 and C6a were sequenced from the ends by the chain terminator method. A "shotgun" sequencing analysis technique was used for sequencing both DNA strands of C6a inserts. The horizontal arrows indicate the direction and extent of each sequence analysis. The protein coding region of inserted C6a is framed and the shaded portion shows the region encoding mature protein.
DNA-strukturen, der koder for 3-des-OH-cystatin C, omfatter nucleotider afledt af aminosyre-sekvens for klonen 20 C6a og cDNA, der koder for humant precystatin C. Nummereringen af nucleotid-sekvensen begynder ved det første nu-cleotid og forløber i retning fra 5' til 3'. Amino-syre-nummereringen begynder med den første aminosyre i det modne protein. Kozak-initieringen og polyadenyleringssig-25 nalet er understreget.The DNA structure encoding 3-des-OH cystatin C comprises nucleotides derived from amino acid sequence for clone 20 C6a and cDNA encoding human precystatin C. The numbering of the nucleotide sequence begins at the first nucleotide and extending in the direction of 5 'to 3'. The amino acid numbering begins with the first amino acid in the mature protein. The Kozak initiation and polyadenylation signal are emphasized.
EKSEMPEL 2EXAMPLE 2
Cytoplasmatisk ekspression af methionin ekstenderet 3-30 des-OH-cystatin C i E. coliCytoplasmic expression of methionine extended 3-30 des-OH-cystatin C in E. coli
Plasmidet pUC18/C6a, der indeholder cDNA sekvensen for 3-des-OH-cystatin C, blev skåret med restriktionsenzymerne Ncol/Hindlll, hvorefter plasmidfragmentet blev oprenset.The plasmid pUC18 / C6a containing the cDNA sequence of 3-des-OH-cystatin C was cut with the restriction enzymes NcoI / HindIII and the plasmid fragment was purified.
35 En syntetisk DNA linker indeholdende kodesekvensen for aminosyren methionin samt de første ca. 40 baser af modent cystatin C blev herefter indført mellem Ncol og 8A synthetic DNA linker containing the coding sequence for the amino acid methionine as well as the first ca. 40 bases of mature cystatin C were then introduced between NcoI and 8
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Hindlll stederne (fig. 2). I stedet for de i 3-des-OH-cy-statin C s cDNA forekommende kodoner blev der i linkeren anvendt kodoner, som giver højt udbytte af proteiner i E. coli. Dette plasmid blev skåret med restriktionsenzymerne 5 Clal/EcoRI, hvorefter et fragment på ca. 600 bp indeholdende kodesekvensen for methionin-ekstenderet 3-des-OH-cystatin C blev oprenset.Hind the sites (Fig. 2). Instead of the codons present in the 3-des-OH-cystatin C s cDNA, codons were used in the linker which yield high yields of proteins in E. coli. This plasmid was cut with the restriction enzymes 5 ClaI / EcoRI, after which a fragment of ca. 600 bp containing the coding sequence for methionine-extended 3-des-OH-cystatin C was purified.
Plasmidet pHD162, der indeholder en syntetisk promotor og 10 Shine og Dalgarno sekvens, blev skåret med restriktionsenzymerne Clal/EcoRI, hvorefter plasmidfragmentet blev oprenset. Dette plasmidfragment blev herefter sammensat med ovennævnte 600 bp fragment til dannelse af 3-des-OH-cystatin C ekspressionsplasmidet pHD262 (kodende for me-15 thionin cystatin C) (fig. 3). E. coli MC1061 indeholdende ovennævnte ekspressionsplasmid blev dyrket som beskrevet nedenfor.The plasmid pHD162 containing a synthetic promoter and 10 Shine and Dalgarno sequence was cut with the restriction enzymes Clal / EcoRI and the plasmid fragment was purified. This plasmid fragment was then assembled with the above 600 bp fragment to generate the 3-des-OH-cystatin C expression plasmid pHD262 (encoding methionine cystatin C) (Fig. 3). E. coli MC1061 containing the above expression plasmid was grown as described below.
EKSEMPEL 3 20EXAMPLE 3 20
Periplasmatisk ekspression af 3-des-OH-cystatin C i E. coliPeriplasmic expression of 3-des-OH-cystatin C in E. coli
Plasmidet pUC18/C6a nævnt i eksempel 2 blev skåret med 25 restriktionsenzymerne Ncol/Hindlll, hvorefter plasmidfragmentet blev oprenset. En syntetisk DNA linker indeholdende kodesekvensen for Outer membrane protein A (OmpA) fra E. coli samt de første ca. 40 baser af modent 3-des-OH-cystatin C blev herefter indført mellem Ncol og 30 Hindlll stederne. Der blev anvendt optimale E. coli kodoner. Dette plasmid blev herefter skåret med restriktionsenzymerne Clal/EcoRI, hvorefter et fragment på ca. 700 bp indeholdende kodesekvensen for OmpA signalpeptidet, og 3-des-OH-cystatin C blev oprenset.The plasmid pUC18 / C6a mentioned in Example 2 was cut with the restriction enzymes NcoI / HindIII and the plasmid fragment was purified. A synthetic DNA linker containing the coding sequence for Outer membrane protein A (OmpA) from E. coli as well as the first ca. 40 bases of mature 3-des-OH-cystatin C were then introduced between the NcoI and 30 HindIII sites. Optimal E. coli codons were used. This plasmid was then cut with the restriction enzymes Clal / EcoRI, after which a fragment of ca. 700 bp containing the coding sequence for the OmpA signal peptide and 3-des-OH-cystatin C were purified.
Ovennævnte fragment blev herefter indført i et ekspressionsplasmid indeholdende λ PR promotoren, en optimal Shine 35 9The above fragment was then introduced into an expression plasmid containing the λ PR promoter, an optimal Shine 35 9
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og Dalgarno sekvens, polylinkerregionen fra plasmidet pUCC18, og det temperatursensitive Cl repressorgen fra λ.and Dalgarno sequence, the polylinker region of the plasmid pUCC18, and the temperature-sensitive Cl repressor gene from λ.
Det herved dannede plasmid pHD313 (fig. 4) blev herefter indført i E. coli MC1061. Ekspressionen af 3-des-0H-cy-5 statin C og oprensningen af polypeptidet blev foretaget som ovenfor beskrevet.The resulting plasmid pHD313 (Fig. 4) was then introduced into E. coli MC1061. The expression of 3-des-OH-cystatin C and the purification of the polypeptide were performed as described above.
EKSEMPEL 4 10 Periplasmatisk ekspression af 3-des-OH-cystatin C i E. coliExample 4 Periplasmic Expression of 3-Des-OH-Cystatin C in E. coli
Plasmidet pUC18 blev skåret med Apal/EcoRI, og et fragment på ca. 680 basepar blev oprenset og påligeret en 15 syntetisk Apal/Clal linker, indeholdende kodesekvensen for de ca. 3 første aminosyrer af pre-3-des-0H-cystatin C. Fragmentet blev herefter indført i det i eksempel 3 nævnte ekspressionsplasmid, indeholdende den temperatur-inducerbare λPR promotor.Plasmid pUC18 was cut with Apal / EcoRI and a fragment of ca. 680 base pairs were purified and applied to a synthetic Apal / Clal linker containing the coding sequence of the ca. 3 first amino acids of pre-3-des-OH-cystatin C. The fragment was then introduced into the expression plasmid mentioned in Example 3 containing the temperature-inducible λPR promoter.
20 EKSEMPEL 5EXAMPLE 5
Ekspression af periplasmatisk modificeret 3-des-OH-cysta-tin C i E. coli 25Expression of periplasmically modified 3-des-OH cysteine T in E. coli 25
Fra ekspressionsplasmidet pHD313 (eksempel 3) blev isoleret et Hindlll/EcoRI fragment på ca. 700 bp. Fragmentet blev introduceret i M13 MP18 og udsat for in vitro muta-genisering, således at kodesekvensen for cystatin C blev 30 ændret til at indeholde en eller flere af nedenstående modifikationer, tabel 1. Efter in vitro mutagenisering blev en række kloner opdyrket og sekvensbestemt. Kloner med korrekt sekvens blev herefter skåret med Clal/EcoRI, hvorefter et fragment på ca. 700 bp blev isoleret og in-35 troduceret i ekspressionsplasmidet pHD313. De herved opnåede plasmider blev dyrket og produktet oprenset, som beskrevet ovenfor.From the expression plasmid pHD313 (Example 3), a HindIII / EcoRI fragment of ca. 700 bp. The fragment was introduced into M13 MP18 and subjected to in vitro mutagenization, so that the coding sequence for cystatin C was changed to contain one or more of the following modifications, Table 1. After in vitro mutagenization, a number of clones were cultured and sequenced. Clones of correct sequence were then cut with Clal / EcoRI, followed by a fragment of ca. 700 bp were isolated and introduced into the expression plasmid pHD313. The resulting plasmids were grown and the product purified as described above.
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Tabel 1 3-des-OH-cystatin C-mutanter med modificeret DNA-sekvens 5 1. Gly11 -* pos. ladet, f.eks. Arg 2. Gly11 -* neg. ladet, f.eks. Glu 11 3. Gly -► kraftigt hydrofob, f.eks. Trp 10 11 11 11 11 4. 4.Gly -> Ala , 5Gly ->Ser 5. Substitution ved enkelte aminosyrer, f.eks.Table 1 3-des-OH-cystatin C mutants with modified DNA sequence 5 1. Gly11 - * pos. charged, e.g. Arg 2. Gly11 - * neg. charged, e.g. Glu 11 3. Gly -► strongly hydrophobic, e.g. Trp 10 11 11 11 11 4. 4.Gly -> Ala, 5Gly -> Ser 5. Substitution by single amino acids, e.g.
OISLAND
a.) Arg -♦ Glu g 15 b. ) Leu -♦ Arg,Glu c. ) Val10 - Arg,Glu d. ) Gly12 -» Arg,Glu 13 e. ) Pro -* Arg,Glu,Trp 14 f. ) Arg -* Arg, Glu 20 6. Substitution af hele regionen f.eks.a.) Arg - ♦ Glu g 15 b.) Leu - ♦ Arg, Glu c.) Val10 - Arg, Glu d.) Gly12 - »Arg, Glu 13 e.) Pro - * Arg, Glu, Trp 14 f. Arg - * Arg, Glu 20 6. Substitution of the whole region e.g.
Arg^-Met"*·^ -♦ Gly-Gly-Gly-Gly-Gly-Gly-Gly EKSEMPEL 6 25Arg ^ -With "* · ^ - ♦ Gly-Gly-Gly-Gly-Gly-Gly-Gly EXAMPLE 6 25
Fremstilling af 3-des-OH-cystatin C i teknisk målestok ved portionsfermentering E. coli MC1061 pHD 313-1-1, der udtrykker 3-des-OH-cysta-30 tin C med korrekt N-terminal, dyrkes på LB petriplade indeholdende ampicillin. En enkeltkoloni overføres til en 100 ml rystekolbe indeholdende LB medium samt 50 m g/1 ampicillin. Denne inkuberes ved 30 °C, 200 rpm i 20 timer.Preparation of 3-des-OH-cystatin C on a technical scale by portion fermentation E. coli MC1061 pHD 313-1-1, which expresses 3-des-OH-cysteine C with correct N-terminal, is grown on LB petri plate containing ampicillin. A single colony is transferred to a 100 ml shake flask containing LB medium as well as 50 m g / l ampicillin. This is incubated at 30 ° C, 200 rpm for 20 hours.
Ferménteringen udføres i 10 1 laboratoriefermentor ved følgende betingelser: pH = 7,2, beluftning = 1 WM, omrø- 35 11The fermentation is carried out in 10 L of laboratory fermentor under the following conditions: pH = 7.2, aeration = 1 WM, stirring
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ring = 1000 rpm og temperatur = 30 °C i den første fase.ring = 1000 rpm and temperature = 30 ° C in the first phase.
Det benyttede medium består af gærekstrakt, casaminosyrer og forskellige salte.The medium used consists of yeast extract, casamino acids and various salts.
5 Fermentoren podes med 100 ml kultur fra rystekolben, og glucosedoseringen starter, når biomassekoncentrationen er OD525 = 5. Doseringshastighed skal være 3,5 g gluco- se/l’h, og den fastholdes under det resterende forløb af processen. Dannelsen af 3-des-0H-cystatin C induceres ved 10 at hæve temperaturen i fermentoren til 40 °C i den sene vækstfase (OD-,,.- = 50). 3-des-OH-Cystatin C dannes 525 nm hurtigt, og - 2 timer efter at temperaturen er hævet afsluttes fermenteringen ved at sænke temperaturen til 20 °C og hæve pH til 9,0. Hele fermenteringsprocessen tager 15 ca. 12 timer.5 The fermenter is seeded with 100 ml culture from the shake flask and the glucose dosing starts when the biomass concentration is OD525 = 5. The dosage rate should be 3.5 g glucose / l and maintained during the remainder of the process. The formation of 3-des-OH-cystatin C is induced by raising the temperature of the fermentor to 40 ° C in the late growth phase (OD -, - = 50). 3-des-OH-Cystatin C forms 525 nm rapidly and - 2 hours after raising the temperature, the fermentation is terminated by lowering the temperature to 20 ° C and raising the pH to 9.0. The whole fermentation process takes 15 approx. 12 hours.
Ved processen opnås slutkoncentrationer af 3-des-OH-cystatin C på ca. 1000 mg/1 (3-des-OH-cystatin C udgør ca. 10% af totalproteinet i cellen).In the process, final concentrations of 3-des-OH-cystatin C of approx. 1000 mg / l (3-des-OH-cystatin C constitutes about 10% of the total protein in the cell).
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Ekstraktion I af 3-des-OH-cystatin C fra E. coliExtraction I of 3-des-OH-cystatin C from E. coli
Cellesuspension fra fermenteringen centrifugeres. Cellerne resuspenderes i 20-25% w/w saccharose, 0,1M EDTA, 0,2M 25 Tris pH 9,0 og henstår under omrøring i 20 minutter.Cell suspension from the fermentation is centrifuged. The cells are resuspended in 20-25% w / w sucrose, 0.1M EDTA, 0.2M Tris pH 9.0 and left under stirring for 20 minutes.
Supernatanten herfra indeholder 3-des-OH-cystatin C fra den periplasmatiske fase (70% af total ekstraktion ved mekanisk homogenisering).The supernatant thereof contains 3-des-OH-cystatin C from the periplasmic phase (70% of total extraction by mechanical homogenization).
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Ekstraktion II af 3-des-OH-cystatin C fra E. coliExtraction II of 3-des-OH-cystatin C from E. coli
Cellesuspension fra fermentering justeres til pH = 10,5 med 5M NaOH. Efter omrøring i 20 minutter centrifugeres 35 suspensionen. Supernatanten herfra indeholder 3-des-OH-cyståtin C.Cell suspension from fermentation is adjusted to pH = 10.5 with 5M NaOH. After stirring for 20 minutes, the suspension is centrifuged. The supernatant thereof contains 3-des-OH cysteine C.
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1212
Ekstraktion III af 3-des-OH-cystatin C fra E. coliExtraction III of 3-des-OH-cystatin C from E. coli
Cellesuspension fra fermentering centrifugeres og resus-penderes i 0,5M Tris pH = 10,5. Efter omrøring i 20 mi-5 nutter centrifugeres supensionen. Supernatanten herfra indeholder 3-des-OH-cystatin C.Cell suspension from fermentation is centrifuged and resuspended in 0.5M Tris pH = 10.5. After stirring for 20 minutes, the supernatant is centrifuged. The supernatant thereof contains 3-des-OH-cystatin C.
Ekstrakten dialyseres mod 20 mM ethanolamin, pH = 10,0 med en dialysemembran af typen Spectrapor© (mv-afskær 10 3500) og påføres dernæst en Q-Sepharosekoionne, som er ækvilibreret i 20 mM ethanolamin, pH = 10,0. Fraktioner indeholdende 3-des-OH-cystatin C forenes og koncentreres på et filter af typen Diaflo®YM2. Dernæst påføres materialet en kolonne af typen Bio-Gel®P60, som er ækvilibre-15 ret i 0,05 M ammoniumhydrogencarbonat. Fraktioner indeholdende 3-des-OH-cystatin C opsamles. Udbyttet er typisk 50-60% ved denne isoleringsprocedure.The extract is dialyzed against 20 mM ethanolamine, pH = 10.0 with a Spectrapor® type dialysis membrane (cut-off 10 3500) and then applied to a Q-Sepharose ion equilibrated in 20 mM ethanolamine, pH = 10.0. Fractions containing 3-des-OH-cystatin C are combined and concentrated on a Diaflo®YM2 type filter. Next, the material is applied to a column of the Bio-Gel® P60 type which is equilibrated in 0.05 M ammonium hydrogen carbonate. Fractions containing 3-des-OH-cystatin C are collected. The yield is typically 50-60% in this isolation procedure.
EKSEMPEL 7 20EXAMPLE 7 20
Konstruktion af et syntetisk gen, der koder for 3-des-OH-cystatin C under anvendelse af optimale E. coli kodonerConstruction of a synthetic gene encoding 3-des-OH-cystatin C using optimal E. coli codons
Fra litteraturen er det kendt, at højt udtrykte E. coli 25 proteiner forudsætter anvendelse af bestemte kodoner for de enkelte aminosyrer. Samtidig med fremstilling af cDNA for 3-des-OH-cystatin C blev der på basis af den publicerede aminosyresekvens syntetiseret et 3-des-OH-cystatin C gen, indeholdende de kodoner, der foretrækkes for højt 30 udtrykte E. coli proteiner. Genet var samtidig modificeret på en sådan måde, at det tillod en fusion med signalsekvensen fra enten outer membrane protein A fra E. coli eller signalsekvensen fra fibria-proteinet K88/99 fra E. coli. Efter syntese blev ovennævnte gen klonet trinvis i 35 plasmidet pUC18. Genet blev herefter isoleret og indført i det i eksempel 3 nævnte ekspressionsplasmid i kombination med een af ovennævnte signalsekvenser. PlasmidetFrom the literature, it is known that highly expressed E. coli 25 proteins require the use of certain codons for the individual amino acids. Simultaneously with the preparation of cDNA for 3-des-OH-cystatin C, a 3-des-OH-cystatin C gene was synthesized based on the published amino acid sequence containing the codons preferred for highly expressed E. coli proteins. The gene was simultaneously modified in such a way that it allowed a fusion with the signal sequence from either outer membrane protein A from E. coli or the signal sequence from fibria protein K88 / 99 from E. coli. After synthesis, the above gene was cloned stepwise into plasmid pUC18. The gene was then isolated and introduced into the expression plasmid mentioned in Example 3 in combination with one of the above signal sequences. plasmid
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13 blev indført i E. coli MC1061 og dyrket som beskrevet ovenfor.13 was introduced into E. coli MC1061 and grown as described above.
OmpA-3-des-OH-cystatin c genet med optimale kodoner for 5 E. coli har følgende struktur: CG-ATG-AAA-AAA-ACT-GCT-ATC-GCT-ATC-GCT-GTT-GCT-CTG-GCT-GGT-TTC-GCT-ACT-GTT-GCT-CAG-GCT-TCT-TCT-CCT-GGT-AAA-CCG-10 CCT-CGT-CTG-GTT-GGT-GGT-CCG-ATG-GAC-GCT-TCT-GTT-GAA-GAA- GAA-GGT-GTT—CGT-CGT-GCT-CTG-GAC-TTC-GCT-GTT-GGT-GAA-TAO AAC-AAA-GCT-GTT-AAC-GAC-ATG-TAC-CAC-TCT-CGT-GCT-CTG-CAG-GTT-GTT-CGT-GCT-CGT-AAA-CAG-ATC-GTT-GCT-GGT-GTT-AAC-TAC-TTC-CTG-GAC-GTT-GAA-CTG-GGT-CGT-ACC-ACC-TGC-ACC-AAA-ACC-χ 5 CAG-CCG-AAC-CTG-GAC-AAC-TGC-CCG-TTC-CAC-GAC-CAG-CCG-CAC-The ompA-3-des-OH cystatin c gene with optimal codons for 5 E. coli has the following structure: CG-ATG-AAA-AAA-ACT-GCT-ATC-GCT-ATC-GCT-GTT-GCT-CTG-GCT -GGT-TTC-GCT-ACT-GTT-GCT-CAG-GCT-TCT-TCT-CCT-GGT-AAA-CCG-10 CCT-CGT-CTG-GTT-GGT-GGT-CCG-ATG-GAC-GCT- TCT-GTT-GAA-GAA-GAA-GGT-GTT — CGT-CGT-GCT-CTG-GAC-TTC-GCT-GTT-GGT-GAA-TAO AAC-AAA-GCT-GTT-AAC-GAC-ATG-TAC -CAC-TCT CGT GCT CTG CAG GTT GTT CGT GCT CGT-AAA CAG ATC GTT GCT GGT GTT AAC TAC TTC CTG GAC GTT GAA -CTG-GGT-CGT-ACC-ACC-TGC-ACC-AAA-ACC-χ 5 CAG-CCG-AAC-CTG-GAC-AAC-TGC-CCG-TTC-CAC-GAC-CAG-CCG-CAC-
CTG-AAA-CGT-AAA-GCT-TTC-TGC-TCT-TTC-CAG-ATC-TAC-GCT-GTT-CCG-TGG-CAG-GGT-ACC-A'TG-ACC-CTG-TCT-AAA-TCT-ACC-TGC-CAG-GAC-GCT-TAA-TAGCTG-AAA CGT-AAA GCT TTC TGC TCT TTC CAG ATC TAC GCT-GTT CCG TGG CAG GGT ACC A'TG-ACC-CTG TCT AAA TCT ACC TGC CAG GAC GCT TAA TAG
20 EKSEMPEL 8EXAMPLE 8
Fremstilling og isolation af 3-des-OH-cystatin C 25Preparation and isolation of 3-des-OH-cystatin C 25
Bakterie-medier indeholdende 3-des-OH-cystatin c blev centrifugeret, og bakteriefrit medium blev koncentreret på et Diaflo™YM2 filter. Koncentratet blev dialyseretBacterial media containing 3-des-OH cystatin c were centrifuged and bacterial-free medium was concentrated on a Diaflo ™ YM2 filter. The concentrate was dialyzed
TMTM
overfor 20 mM ethanolamin, pH = 10,0 i en Spectrapor 1 2 3 4 5 6 dialysemembran (mol vægt af skæring 3500) og derefter påført 2to 20 mM ethanolamine, pH = 10.0 in a Spectrapor 1 2 3 4 5 6 dialysis membrane (mole weight of cutting 3500) and then applied 2
TMTM
3 en Q-Sepharose kolonne, ækvilibreret i 20 mM ethanolamin, pH = 10,0. Fraktioner indeholdende 3-des-OH-cystatin C blev samlet og koncentreret på et Diaflo™YM2 fil- 43 a Q-Sepharose column, equilibrated in 20 mM ethanolamine, pH = 10.0. Fractions containing 3-des-OH-cystatin C were pooled and concentrated on a Diaflo ™ YM2
TMTM
5 ter. Materialet blev påført en Bio-Gel kolonne, ækvili- 6 breret i 0,05 M ammoniumbicarbonat. Fraktioner indeholdende 3-des-OH-cystatin blev forenet. Ved denne isolationsprocedure er udbyttet af 3-des-OH-cystatin C typisk5 ter. The material was applied to a Bio-Gel column, equilibrated in 0.05 M ammonium bicarbonate. Fractions containing 3-des-OH-cystatin were combined. In this isolation procedure, the yield of 3-des-OH-cystatin C is typical
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14 50-60%.14 50-60%.
EKSEMPEL 9EXAMPLE 9
5 Karakterisering af 3-des-OH-cystatin C5 Characterization of 3-des-OH-cystatin C
3-des-OH-cystatin C, der er isoleret som ovenfor beskrevet udfra en kultur af pHD 313-tranformeret E. coli, blev fysisk-kemisk karakteriseret i henseende til biologisk 10 aktivitet. Resultaterne af karakteriseringen blev sammenlignet med resultater fra tilsvarende analyser af human cystatin C.3-des-OH-cystatin C, isolated as described above from a culture of pHD 313-transformed E. coli, was physicochemically characterized for biological activity. The results of the characterization were compared with results from similar analyzes of human cystatin C.
En analyse ifølge Ouchterlony baseret på dobbelt immun 15 diffusionsteknik viste, at alle cystatin C-epitoper, som genkendes ved et polyklonal anti-serum, der er dyrket over for human cystatin C, også er tilstede i 3-des-OH-cystatin C. Agarosegel elektroforese ved pH-8,6 og SDS-PAGE under reducerende eller ikke-reducerende betingelser 20 viste, at 3-des-OH-cystatin C og human cystatin C er identiske med henseende til ladning og molekylvægt. En aminosyreanalyse viste, at aminosyresammensætningen i 3-des-OH-cystatin C er næsten identisk med sammensætningen i human cystatin C. Automatisk sekvensbestemmelse viste, 25 at 3-des-OH-cystatin C har N-terminalsekvensen: SSPGKPPRLVGGPMDASVEEEGV—ALDFAVGEYNKASNDMY ved hver position, hvilket er identisk med sekvensen i human cystatin C (jf. ref. 1), og at desuden 100% af prolin-remanensen ved position 3 i 3-des-OH-cystatin C manglede en hydrox-30 ylgruppe. Aminosyreanalyse af disulfidbundet polypeptider viste, at 3-des-OH-cystatin C har disulfidbroer mellem Cys^-Cys^ og Cys^-Cys^, dvs. det samme som er tilfældet for human cystatin C (jf. ref. 15).A double-immuno diffusion technique based on Ouchterlony showed that all cystatin C epitopes recognized by a polyclonal anti-serum grown against human cystatin C are also present in 3-des-OH cystatin C. Agarose gel electrophoresis at pH-8.6 and SDS-PAGE under reducing or non-reducing conditions 20 showed that 3-des-OH-cystatin C and human cystatin C are identical in terms of charge and molecular weight. An amino acid analysis showed that the amino acid composition of 3-des-OH-cystatin C is almost identical to the composition of human cystatin C. Automatic sequence determination showed that 3-des-OH-cystatin C has the N-terminal sequence: SSPGKPPRLVGGPMDASVEEEGV-ALDFAVGEYNK , which is identical to the sequence in human cystatin C (cf. ref. 1), and in addition 100% of the proline residue at position 3 of 3-des-OH-cystatin C lacked a hydroxyl group. Amino acid analysis of disulfide-linked polypeptides showed that 3-des-OH-cystatin C has disulfide bridges between Cys ^ -Cys ^ and Cys ^ -Cys ^, i.e. the same as for human cystatin C (cf. ref. 15).
35 Biologisk aktivitet af 3-des-OH-cystatin C er bestemt ved titrering overfor koncentreret determineret papain. 3-des-OH-cystatin C var 83% aktiv, hvilket er højere end de 15 tilsvarende tal for human cystatin C (55%). Styrken af bindingen 3-des-OH-cystatin C på cysteinproteinaserne papain (EC 3.4.22.2), cathepsin B (EC 3.4.22.1) og dipepti-dylpeptidase I (EC 3.4.14.1) blev bestemt. Ligevægtkon-5 stanten for dissociation af 3-des-OH-cystatin C enzymkom-pleks (<0,005 nM, 0,50 nM og 3,5 nM) lå indenfor den eksperimentelle fejlgrænse, identisk med ligevægtskonstanten for human cystatin C enzymkompleks (<0,005 nM, 0,27 nM og 3,5 nM). Således udviste fysisk-kemisk karakterisation og 10 analyser, udført ved indvirkning af 3-des-OH-cystatin med cysteinproteinaser, at 3-des-OH-cystatin C har fuldt biologisk aktivitet og er identisk med human cystatin C med den undtagelse, at hydroxylgruppen i position 3 helt mangler.Biological activity of 3-des-OH-cystatin C is determined by titration against concentrated determined papain. 3-des-OH-cystatin C was 83% active, which is higher than the 15 corresponding figures for human cystatin C (55%). The strength of the binding 3-des-OH-cystatin C on the cysteine proteinases papain (EC 3.4.22.2), cathepsin B (EC 3.4.22.1) and dipeptidylpeptidase I (EC 3.4.14.1) was determined. The equilibrium constant for dissociation of 3-des-OH-cystatin C enzyme complex (<0.005 nM, 0.50 nM and 3.5 nM) was within the experimental error limit, identical to the equilibrium constant of human cystatin C enzyme complex (<0.005 nM, 0.27 nM and 3.5 nM). Thus, physicochemical characterization and assays performed by the action of 3-des-OH-cystatin with cysteine proteinases showed that 3-des-OH-cystatin C has full biological activity and is identical to human cystatin C except that the hydroxyl group in position 3 completely missing.
15 EKSEMPEL 10EXAMPLE 10
Sammenligning af den biologiske aktivitet af 3-des-OH-cystatin C med cystatin C af human oprindelse 20Comparison of the biological activity of 3-des-OH-cystatin C with cystatin C of human origin 20
Den papain-inhiberende kapacitet af rekombinant 3-des-OH-cystatin C blev sammenlignet med den tilsvarende aktivitet af human cystatin C. 1 2 3 4 5 6 7 8 9 10 11The papain-inhibitory capacity of recombinant 3-des-OH-cystatin C was compared to the corresponding activity of human cystatin C. 1 2 3 4 5 6 7 8 9 10 11
Human cystatin C blev isoleret af urin fra patienter med 2 blandet glomerulær-tubulær proteinuri ved ultrafiltre 3 ring, ionbytningskromatografi og gelfiltrering som be 4 skrevet i litteraturen (ref. 2,3) og lyofiliseret. Ialt 5 10 forskellige præparater af dels human cystatin C dels 6 3-des-OH-cystatin C blev testet for deres cystein-protei- 7 nase-inhibitoriske kapacitet. Cystatin C og 3-des-0H-Cy- 8 statin C præparaterne udvundet henholdsvis af human urin 9 og fremstillet ved rekombinant teknik blev hver for sig 10Human cystatin C was isolated from urine from patients with 2 mixed glomerular-tubular proteinuria by ultrafilter 3 ring, ion exchange chromatography and gel filtration as described in literature (ref. 2.3) and lyophilized. A total of 5 different preparations of both human cystatin C and 6 3-des-OH-cystatin C were tested for their cysteine protein 7 inhibitory capacity. Cystatin C and 3-des-OH-Cy8 statin C preparations derived from human urine 9, respectively, and prepared by recombinant technique were separately 10
opløst i 0,15 mol/liter ammoniumbicarbonat. Cystatin Cdissolved in 0.15 mol / liter ammonium bicarbonate. Cystatin C
11 koncentrationer af de resulterende opløsninger blev bestemt fysisk kemisk og ved immun-diffusion og kvantificering af aminosyrer frigivet ved hydrolyse i 6 mol/liter 16Eleven concentrations of the resulting solutions were determined physically chemically and by immuno-diffusion and quantification of amino acids released by hydrolysis in 6 moles / liter 16
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HCIJ Cystein-proteinase-inhiberingskapaciteten af disse opløsninger blev bestemt ved tilsætning af en opløsning af isoleret papain (ref. 4), der er en plantecystein-pro-teinase, som generelt anvendes som en model for cystein-5 proteinase, og derpå bestemtes den resterende proteoly-tiske aktivitet af de dannede blandinger.The HCIJ cysteine proteinase inhibition capacity of these solutions was determined by adding a solution of isolated papain (ref. 4) which is a plant cysteine proteinase which is generally used as a model for cysteine proteinase and then determined residual proteolytic activity of the mixtures formed.
Cystein-proteinase-aktiviteterne af papainopløsningen og cystatin C-papainblandingerne blev bestemt under anven-10 delse af substratet Z-Phe-Arg-NHMec (ref. 5). Den molære koncentration af aktivt enzym i papain-opløsningerne bestemtes ved hjælp af den irreversible papain-inhibitor E-64 (ref. 6).The cysteine proteinase activities of the papain solution and cystatin C-papain mixtures were determined using the substrate Z-Phe-Arg-NHMec (ref. 5). The molar concentration of active enzyme in the papain solutions was determined by the irreversible papain inhibitor E-64 (ref. 6).
15 De molære inhibitor-kapaciteter af de forskellige præparater af cystatin C blev beregnet som forholdet mellem papain-inhibitor-kapaciteten af cystatin C opløsningerne, idet 1 mol cystatin C antages at inhibere 1 mol papain, hvorved den molære koncentration af cystatin C i opløs-20 ningerne er målt ved fysisk-kemiske eller immunokemiske metoder under forudsætning af en molvægt på 13343 for cystatin C. Målt på denne måde opnåedes molær inhibitorisk kapacitet af cystatin C isoleret fra human urin til 5-55%, medens den inhibitoriske kapacitet af flere prøver 25 af rekombinant 3-des-OH-cystatin C lå i området 83-98%.The molar inhibitor capacities of the various preparations of cystatin C were calculated as the ratio of the papain inhibitor capacity of the cystatin C solutions, assuming 1 mol of cystatin C to inhibit 1 mol of papain, thereby increasing the molar concentration of cystatin C in the solution. The measurements were measured by physicochemical or immunochemical methods assuming a molecular weight of 13343 for cystatin C. Measured in this way, the molar inhibitory capacity of cystatin C isolated from human urine was obtained to 5-55%, while the inhibitory capacity of several samples. 25 of recombinant 3-des-OH-cystatin C ranged from 83-98%.
Det fremgår heraf, at den biologiske potens af alle undersøgte præparater af rekombinant 3-des-OH-cystatin C væsentlig overstiger den biologiske potens af alle cystatin C præparater, der er isoleret fra humane biologiske 30 væsker.It can be seen from this that the biological potency of all investigated preparations of recombinant 3-des-OH-cystatin C substantially exceeds the biological potency of all cystatin C preparations isolated from human biological fluids.
EKSEMPEL 11EXAMPLE 11
Terapeutisk anvendelse af rekombinant 3-des-OH-cystatin C 35 som et CNS-beskyttende middel ved chymopapin-behandling af sciatica 17Therapeutic use of recombinant 3-des-OH-cystatin C 35 as a CNS protective agent in chymopapine treatment of sciatica 17
Umiddelbart før chymopapinbehandling af patienter med sciatica blev en molær mængde 3-des-OH-cystatin C, 3 gange højere end den anvendte molære mængde chymopapin, injiceret i den cerebrospinale væske. Hvis f.eks. 8 mg chy-5 mopapin (den aktive komponent af de for tiden tilgængelige lægemidler: Disease®; Travenol Laboratories Ltd.,Immediately prior to chymopapine treatment of patients with sciatica, a molar amount of 3-des-OH-cystatin C, 3 times higher than the molar amount of chymopapine used, was injected into the cerebrospinal fluid. For example, 8 mg of chy-5 mopapine (the active component of currently available drugs: Disease®; Travenol Laboratories Ltd.,
Thetford, UK and Chymodiactin®; Smith Laboratories, Inc., Rosemont, IL, U.S.A.) skal anvendes til intradiscal injektion, injiceres 12 mg 3-des-OH-cystatin C i den cere-10 brospinale væske. Injektionspræparatet kunne være sammensat af 5 mg 3-des-OH-cystatin C pr. ml steril fysiologisk saltopløsning. Dette vil beskytte over for enhver sidevirkning, der skyldes proteolytisk nedbrydning af nervevæv, forårsaget af fejlagtig injektion af chymopapain i 15 den cerebrospinale væske.Thetford, UK and Chymodiactin®; Smith Laboratories, Inc., Rosemont, IL, U.S.A.) is to be used for intradiscal injection, 12 mg of 3-des-OH-cystatin C is injected into the cere-10 bridge spinal fluid. The injection preparation could be composed of 5 mg of 3-des-OH-cystatin C per day. ml of sterile physiological saline solution. This will protect against any side effect caused by proteolytic degradation of nerve tissue caused by incorrect injection of chymopapain into the cerebrospinal fluid.
Hvis kliniske eller radiografiske tegn på fejlagtig chy-mopapininjektion i den cerebrospinale væske i stedet iagttages ved eller efter udførelse af den tilsigtede in-20 tradiscale chymopapaininjektion, anvendes en molær mængde 3-des-OH-cystatin C, som er tre gange højere end den molære mængde af det anvendte chymopapain, og det injiceres straks i den cerebrospinale væske for at inhibere den vævsbeskadigende effekt af chymopapain. Umiddelbart efter 25 injektion af 3-des-OH-cystatin C bliver patienten udsat for en vis bevægelse for at sikre en hurtig fordeling af den injicerede opløsning af 3-des-OH-cystatin C med den cerebrospinale væske på patienten.If clinical or radiographic evidence of erroneous chymopapine injection into the cerebrospinal fluid is observed instead or at the time of the intended intradermal chymopapain injection, a molar amount of 3-des-OH cystatin C, which is three times higher than the molar amount of the chymopapain used and it is immediately injected into the cerebrospinal fluid to inhibit the tissue-damaging effect of chymopapain. Immediately after injection of 3-des-OH-cystatin C, the patient is subjected to some movement to ensure a rapid distribution of the injected solution of 3-des-OH-cystatin C with the cerebrospinal fluid on the patient.
30 EKSEMPEL 12EXAMPLE 12
Terapeutisk anvendelse af 3-des-OH-cystatin C ved behandling af Herpes simplex 35 Præparater indeholdende rekombinant 3-des-OH-cystatin C, fremstillet ifølge opfindelsen, blev sammenlignet for antiviral aktivitet med de kendte antivirale medikamenter 18Therapeutic use of 3-des-OH-cystatin C in the treatment of Herpes simplex 35 Compositions containing recombinant 3-des-OH-cystatin C, prepared according to the invention, were compared for antiviral activity with the known antiviral drugs 18
DK 164283 BDK 164283 B
Cyclovir® og Z-LVG-CNH^.Cyclovir® and Z-LVG-CNH
I den første serie eksperimenter blev papirskiver imprægneret med Z-LVG-CNH2 (24 ug pr. skive) og placeret på mo-5 nolag af nyreceller fra grønne aber inficeret med poliovirus 1 eller herpes simplex virus type 1 (HSV).In the first series of experiments, paper slices were impregnated with Z-LVG-CNH2 (24 µg per slice) and placed on monolayers of green monkey kidney cells infected with poliovirus 1 or herpes simplex virus type 1 (HSV).
Ved denne screening for antiviral aktivitet blev der ikke observeret nogen plaque-dannelse med poliovirus. Markante 10 inhiberingszoner opstod dog omkring disse skiver, når celler blev inficeret med HSV. Derpå undersøgtes, hvorvidt tilsætning af Z-LVG-CNH2 til dyrkningsmediet kunne påvirke væksten af poliovirus eller HSV i cellekulturer.In this screening for antiviral activity, no plaque formation with poliovirus was observed. However, striking 10 inhibition zones occurred around these slices when cells were infected with HSV. It was then investigated whether adding Z-LVG-CNH2 to the culture medium could affect the growth of poliovirus or HSV in cell cultures.
Også i dette tilfælde blev HSV-replikationen blokeret 15 (>99,9% inhibering) medens effekten på poliovirus-repli- kation næppe var mærkbar (jævnfør tabel 2).In this case too, HSV replication was blocked (> 99.9% inhibition) while the effect on poliovirus replication was hardly noticeable (see Table 2).
TABEL 2TABLE 2
Anti-virale aktiviteter af 3-des-OH-cystatin C og Z-LVG-CNH« 20 ΔAnti-viral activities of 3-des-OH-cystatin C and Z-LVG-CNH «20 Δ
Virus udbytte (pfu/ml) 3-des-OH- Medium Z-LVG-CNH2 cysta- med 1% i 1%Virus Yield (pfu / ml) 3-des-OH- Medium Z-LVG-CNH2 Cysteine with 1% in 1%
Virus Medium tin C DMSO DMSOVirus Medium tin C DMSO DMSO
Poliovirus a η n 7 type 1 1,2 x 10° 1,1 x 10° 1,5 x 10° 4,8 x 10 HVS type 1 8,8 x 107 2,4 x 103 6,4 x 106 1,4 x 103 METODE: Celler på grønne aber (stamme GMK-AH1) blev infi-30 ceret med poliovirus (Mahoney-stamme) eller HSV- 35 19 type 1 (F-stamme) med en multiplicitet på henholdsvis 1 og 10). Efter 2 timer blev tilsat serum-frit medium (MEM, Flow Laboratories) indstillet til at indeholde 0,10 mM cystatin C eller 0,4 5 mM Z-LVG-CNH2. Z-LVG-CNH2blev opløst i MEM medium indeholdende 1% dimethylsulfoxid (DMSO) for at holde peptidderivatet i opløsning. Plaque-titreringer (pfu: plaque-dannende enheder) blev udført på GMK-celler som tidligere beskrevet. Ved alle 10 forsøg blev anvendt 3 Petri-skåle (Falcon 6 cm diameter) i hvert fortyndingstrin. Værdier bestemt ved tælling ved mindst 40 pfu og værdierne angivet i tabellen er fra typiske og reproducerbare forsøg.Poliovirus a η n 7 type 1 1.2 x 10 ° 1.1 x 10 ° 1.5 x 10 ° 4.8 x 10 HVS type 1 8.8 x 107 2.4 x 103 6.4 x 106 1, 4 x 103 METHOD: Cells on green monkeys (strain GMK-AH1) were infected with poliovirus (Mahoney strain) or HSV-19 type 1 (F strain) with a multiplicity of 1 and 10, respectively). After 2 hours, serum-free medium (MEM, Flow Laboratories) was added to contain 0.10 mM cystatin C or 0.4 mM Z-LVG-CNH2. Z-LVG-CNH2 was dissolved in MEM medium containing 1% dimethyl sulfoxide (DMSO) to keep the peptide derivative in solution. Plaque titrations (pfu: plaque-forming units) were performed on GMK cells as previously described. In all 10 experiments, 3 Petri dishes (Falcon 6 cm diameter) were used in each dilution step. Values determined by counting at least 40 pfu and the values given in the table are from typical and reproducible experiments.
1515
Fig. 5 illustrerer vækstkurverne for herpes simplex virus type 1 i nærvær af forskellige koncentrationer af rekom-binant 3-des-0H-cystatin C, Z-LVG-CNH^ og Acyclovir®. Ved undersøgelsen blev CMK-AH1 celler podet med 10 pfu 20 (plaque-dannende enheder) pr. celle svarende til 5 x 10^ pfu pr. ml i 1 time ved 37 °C. Efter vask blev målt en 3 rest-infektivitet på ca. 10 pfu, og denne værdi repræsenterer således baggrundsniveauer ved begyndelsestidspunktet for vækstkurverne. På dette tidspunkt blev serum-25 frit medium (MEM) indeholdende forskellige koncentrationer af inhibitorerne tilsat til de HSV-inficerede celler efterfulgt af dyrkning ved 37 °C i 48 timer. Til slut blev cellerne frosset og tøet, og der udførtes plaque-ti-treringer. Koncentrationen af 3-des-OH-cystatin C, som 30 var nødvendig for inhibering af viral replikation til baggrunds-niveauet var ca. 0,13 mM, medens de tilsvarende koncentrationer af Z-LVG~CNH2 og Acyclovir var henholdsvis 0,44 mM og 0,22 mM. Anti-HSV-potensen af rekombinant cystatin C og af peptid-derivatet, Z-LVG-CNH2, svarende 35 til en del af dets proteinase-bindende center, er af samme størrelsesorden som for Acyclovir.FIG. 5 illustrates the growth curves of herpes simplex virus type 1 in the presence of various concentrations of recombinant 3-des-OH-cystatin C, Z-LVG-CNH + and Acyclovir®. In the study, CMK-AH1 cells were seeded at 10 pfu 20 (plaque-forming units) per ml. cell corresponding to 5 x 10 ml for 1 hour at 37 ° C. After washing, a 3 residual infectivity of approx. 10 pfu, and this value thus represents background levels at the beginning of the growth curves. At this time, serum-free medium (MEM) containing various concentrations of the inhibitors was added to the HSV-infected cells followed by culture at 37 ° C for 48 hours. Finally, the cells were frozen and thawed and plaque titrations were performed. The concentration of 3-des-OH-cystatin C required for inhibition of viral replication to the background level was approx. 0.13 mM, while the corresponding concentrations of Z-LVG ~ CNH2 and Acyclovir were 0.44 mM and 0.22 mM, respectively. The anti-HSV potency of recombinant cystatin C and of the peptide derivative, Z-LVG-CNH2, corresponding to a portion of its proteinase binding center, is of the same order of magnitude as that of Acyclovir.
2020
DK 164283 BDK 164283 B
Ved de ovenfor beskrevne forsøg blev 3-des-0H-cystatin C og Z-LVG-CNH2 sat til mediet efter at cellerne var podet med virus og derpå grundigt vasket. Da inhibitorerne ikke var til stede i det første trin, indvirker de åbenbart på 5 de senere trin af HSV-replikation. Dette blev også vist, når Z-LVG-CNH2 (0,40 mM) blev blandet med en fortyndet HSV suspension og kun var til stede under den 2 timer lange virale adsorption til cellerne. I dette tilfælde blev antallet af plague ikke reduceret. Inhibering af 10 HSV-replikation var iøvrigt ikke begrænset til celler fra abe-nyrer.In the experiments described above, 3-des-OH-cystatin C and Z-LVG-CNH2 were added to the medium after the cells were inoculated with virus and then thoroughly washed. Since the inhibitors were not present in the first step, they evidently affect the later stages of HSV replication. This was also shown when Z-LVG-CNH2 (0.40 mM) was mixed with a diluted HSV suspension and was present only during the 2 hour viral adsorption to the cells. In this case, the number of plagues was not reduced. Incidentally, inhibition of 10 HSV replication was not restricted to monkey cells.
15 20 " 25 30 35 2115 20 "25 30 35 21
Litteraturliste 1. Grubb, A. & Ldfberg, H., Lt: Proc. Natl. Acad. Sci. 79, 3024-3027, 2982., 5 2. Ldfberg H & Grubb A (1979) Scand J. Clin Lab Invest 39, 619-626.Literature List 1. Grubb, A. & Ldfberg, H., Lt: Proc. Natl. Acad. Sci. 79, 3024-3027, 2982., 5 2. Ldfberg H & Grubb A (1979) Scand J. Clin Lab Invest 39, 619-626.
3. Løfberg H. Grubb A & Brun A (1981) Biomed Res, 298- 10 306.3. Løfberg H. Grubb A & Brun A (1981) Biomed Res, 298-10306.
4. Lindahl P, ALriksson E, Jornvall H & Bj5rk I (1988) Biochemistry 28: 5074-5082).4. Lindahl P, ALriksson E, Jornvall H & Birk I (1988) Biochemistry 28: 5074-5082).
15 5. Barrett AJ & Kirschke H (1982) Methods Enzymol 80, 535-561.5. Barrett AJ & Kirschke H (1982) Methods Enzymol 80, 535-561.
6. Barret AJ, Kembhavi AA; Brown MA, Kirschke H, Knight CG, Tamai M & Hanada K (1982) Biochem J 201, 189- 20 198).6. Barret AJ, Kembhavi AA; Brown MA, Kirschke H, Knight CG, Tamai M & Hanada K (1982) Biochem J 201, 189-20 198).
7. Ghiso et al., Proc. Nat. Acad. Sci. Vol 83 (May 1986), p. 2974-2978.7. Ghiso et al., Proc. Night. Acad. Sci. Vol 83 (May 1986), pp. 2974-2978.
25 8. Biochem. Biophys. Res. Commun. (1986), 136, 548-554. 1 358. Biochem. Biophys. Res. Commun. (1986), 136, 548-554. 1 35
Claims (8)
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
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DK583589A DK164283C (en) | 1987-05-22 | 1989-11-21 | POLYPEPTIDE WITH CYSTATIN C ACTIVITY, DNA SEQUENCE FOR EXPRESSION OF 3-DES-OH CYSTATIN C OR A MODIFICATION THEREOF, PROCEDURES FOR THE PREPARATION OF 3-DES-HYDROXY-CYSTATINE MELDOMMANE MADRIDME OR MADIFICANE MADRIDME USE OF 3-DES-OH CYSTATIN C OR ITS MODIFICATION FOR THE PREPARATION OF A THERAPEUTIC PREPARATION |
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DK260987A DK260987D0 (en) | 1987-05-22 | 1987-05-22 | PROCEDURE FOR PREPARING A HUMAN PROTEIN AND THE DNA SEQUENCE FOR USE IN EXERCISING THE PROCEDURE |
DK260987 | 1987-05-22 | ||
PCT/DK1988/000082 WO1988009384A1 (en) | 1987-05-22 | 1988-05-20 | Method of producing cystatin c or modifications hereof and dna-sequence for use when carrying out the method |
DK8800082 | 1988-05-20 | ||
DK583589A DK164283C (en) | 1987-05-22 | 1989-11-21 | POLYPEPTIDE WITH CYSTATIN C ACTIVITY, DNA SEQUENCE FOR EXPRESSION OF 3-DES-OH CYSTATIN C OR A MODIFICATION THEREOF, PROCEDURES FOR THE PREPARATION OF 3-DES-HYDROXY-CYSTATINE MELDOMMANE MADRIDME OR MADIFICANE MADRIDME USE OF 3-DES-OH CYSTATIN C OR ITS MODIFICATION FOR THE PREPARATION OF A THERAPEUTIC PREPARATION |
DK583589 | 1989-11-21 |
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DK164283B true DK164283B (en) | 1992-06-01 |
DK164283C DK164283C (en) | 1992-10-26 |
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DK583589A DK164283C (en) | 1987-05-22 | 1989-11-21 | POLYPEPTIDE WITH CYSTATIN C ACTIVITY, DNA SEQUENCE FOR EXPRESSION OF 3-DES-OH CYSTATIN C OR A MODIFICATION THEREOF, PROCEDURES FOR THE PREPARATION OF 3-DES-HYDROXY-CYSTATINE MELDOMMANE MADRIDME OR MADIFICANE MADRIDME USE OF 3-DES-OH CYSTATIN C OR ITS MODIFICATION FOR THE PREPARATION OF A THERAPEUTIC PREPARATION |
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