CN1982469A - Appraisement of Tangshen variety - Google Patents

Appraisement of Tangshen variety Download PDF

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Publication number
CN1982469A
CN1982469A CN 200510022871 CN200510022871A CN1982469A CN 1982469 A CN1982469 A CN 1982469A CN 200510022871 CN200510022871 CN 200510022871 CN 200510022871 A CN200510022871 A CN 200510022871A CN 1982469 A CN1982469 A CN 1982469A
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sequence
sample
codonopsis
cmed
numbering
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邵鹏柱
徐宏喜
毕培曦
张艳波
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Hong Kong Jockey Club Institute of Chinese Medicine Ltd
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Hong Kong Jockey Club Institute of Chinese Medicine Ltd
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Abstract

Tangshen 5S rDNA sequence and discrimination of various Tangshen, pseudo-campanumoea javanica and radix platycodi thereby are disclosed.

Description

Identify the method for Radix Codonopsis kind
Technical field:
The present invention relates to molecular biology, genomics, biotechnology and identification and assessment of Chinese medicines field.
Background of invention:
According to Chinese Pharmacopoeia (version in 2000) Radix Codonopsis is campanulaceae plant Radix Codonopsis Codonopsispilosula (Franch.) Nannf., the dry root of radix codonpsis tangshen Codonopsis tangshen Oliv. and plain flower Radix Codonopsis Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen.Its nature and flavor are sweet flat, nontoxic, and invigorating the spleen and replenishing QI is arranged, invigorating the spleen benefit lung effect.Cure mainly a little less than the spleen deficiency syndrome of the lung, the palpitaition of breathing hard, anorexia and loose stool, void is breathed with cough and is coughed, and interior heat disease such as quench one's thirst is the traditional tonic of China.But it is also common to pipe flower Radix Codonopsis Codonopsis tubelosa Kom. on market, the Codonopsis clematidea of codonopsis clematidea Clarke (Schyenk) C.B.Cl., gray wool Radix Codonopsis Codonopsiscanescens Nannf. and globe daisy Radix Codonopsis Codonopsis subglobosa W.W.Sm are sold as the puppet product as Radix Codonopsis surrogate and equal plant leopard Campanumoea javanica Blume ssp.japonica (Makino) Hong and balloonflower root Platycodon grandiflorum (Jacq.) A.DC..In Hong Kong, Radix Codonopsis is normally sold with trade(brand)name plate party, anti-party and line party.But the source, the specification difference, price difference is very big, with bad fill excellent common.In addition, the Radix Codonopsis that a kind of appearance scribbles red material is found on the Hongkong market first, and businessman is the stopping leak purpose with it.Be safe medication, we are by 5S rDNA gene sequencing technology and cooperate morphology, histology, HPLC-UV and X-Ray diffractive technology, and medicinal material itself and appearance material have been carried out deeply, studied in great detail.Found that this its plant origin of red Radix Codonopsis is plain flower Radix Codonopsis.Because geographical environment is planted method for planting, the variation of aspects such as upgrowth situation and complete processing has brought very big influence to the quality of quality, pharmaceutical intermediate and the Chinese patent medicine of codonopsis pilosula self.The traditional discrimination method of codonopsis pilosula is mainly based on form, micro-.Have no talent so far and find the compound that can be used as identifying mark in the chemistry aspect.Show that according to available data Radix Codonopsis at present more adopts control medicinal material to identify in contrast, does not obtain suitable reference substance so far.
How fast, accurately identify Radix Codonopsis source and all size, the true and false and quality, the existence of detection of a target Radix Codonopsis composition from the Radix Codonopsis product, it is one of important topic of the modernization of Chinese medicine that effective quality monitoring and quality evaluation carried out in Radix Codonopsis market.Though exploitation molecular engineering monitoring traditional Chinese medicine quality is at the early-stage, shown its broad prospect of application.In most of eukaryotes, rrna 5S rDNA gene is a series connection multiple multi-copy gene, and they independently exist, do not link to each other with main body RNA (18S-5.8S-28S rDNA), content is abundant in vivo, extensively distributes, and is called as biological intravital living fossil.In higher plant, each repeating unit of 5S rDNA gene is by transcriptional domain and transcribed spacer (Non transcribed spacer, NTS) form, the transcriptional domain high conservative, and transcribed spacer has bigger variation, the unification of this high conservative and variability, the useful mark that the molecule that makes 5S rDNA gene order become multi-copy gene in the research eukaryote forms and develops.The present invention utilizes the difference of 5S rDNA sequence to identify the Radix Codonopsis kind or distinguish its true and false just.For effectively controlling the labile factor in raw material sources and the production process, set about from genomics, with source, the true and false, the quality of identifying Radix Codonopsis kind medicinal material and the quality product of controlling Chinese patent medicine better, thereby, improve the safety and effectiveness of medicine for pharmaceutical industry provides scientific and reasonable guidance.
Summary of the invention:
A: the 5S rDNA sequence that codonopsis pilosula is provided.
B: utilize the kind of the 5S rDNA Sequence Identification stem of noble dendrobium and the method for telling truth from falsehood.
To achieve the object of the present invention, the contriver has collected 25 duplicate samples in different provinces from the whole nation, comprises 7 common Radix Codonopsis kinds in market, 3 commodity Radix Codonopsis, 3 specialty goods Radix Codonopsis and 2 pseudo-product kinds.All samples all passes through expert statement.The 5SrDNA sequence of 25 measured samples is as follows:
A. 7 kinds of Radix Codonopsis amount to 17 samples
(1) Radix Codonopsis Codonopsis pilosula (Franch.) Nannf. sample (numbering CMED-0038-04) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTGCTG GTATGCACCC
GTCAACTCCC CTCCTCTTTA TTCTTTGTAC TATCTCTAAA
CCATATAAGA AGGTCGTTTT GACTGCTCAC GCGCCCAAAA
CCGAGCAAAA CGACCTTTTC GCGCTCTTTC TTAATGTACG
CTGAGTAAAA AAAAGGAGGG AAGTTGACGG G
(2) Radix Codonopsis Codonopsis pilosula (Franch.) Nannf. sample (numbering CMED-0038-05) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTGCTG GTATGCACCC
GTCAAGTCCC CTCCTCTTTA TTGTTTGTAC TATCTCTAAA
CCATATAAGA AGGTCGTTTT GACTGCACAC GCGCCCAAAA
CCGAGCAAAA TGACCTTTTC GCGCTCTTTC TTAATGTACG
CTGAGTAAAA AAAAGGAGGG AAGTTGACGG G
(3) Radix Codonopsis Codonopsis pilosula (Franch.) Nannf. sample (numbering CMED-0038-08) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTGCTG GTATCCACCC
GTCAACTCCC CTCCTCTTTA TTCTTGGTAC TATCTCTAAA
CCATATAAGA AGGTCGTTAT GACTGCTGAC GCGCCCAAAA
GCGAGCAAAA CGTGCTTTTC GCGCTCTTAA TTATTGTACG
GTGAGCAAAA AAAAGGAGGG AAGTTGACGG G
(4) Radix Codonopsis Codonopsis pilsula (Franch.) Nannf. sample (numbering CMED-0038-12) 5S rDNA sequence:
CTAGGATGGG TGACCCCCAG GGAAGTGCTG GTATGCACCG
GTCAAGTCCC CTCCTCTTTA TTCTTTGTAA CATCTCTAAA
CCATATAAGA AGGTCGTTTT GACTGCTCAC GCGCCCAAAA
CCGAGCAAAA CGACCTTTTC GCGCTCTTGT TTAATGCGCG
CTGAGTAAAA AAAAGGAGGG AAGTTGACGG G
(5) plain flower Radix Codonopsis Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-0093-01) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTGCACC
CCCCTTTTGC TGTTTTTTTT ACTCAGCGTA CATTAAGAAA
CCATATAAAA GAAAGAAAAT GCTCGGTTTT GGGCGCGTGA
GCAGTCAAAA CGACCTTCTC GCGCTCTTTA GAGATAGTAC
AAAAGAATAA AGAGGAGGGA AGTTGACGGG
(6) plain flower Radix Codonopsis Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-0093-03) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTGCAGC
CCCCTTTTGC TCTTTTTTTT AATCAGCGTA CATTAACAAA
CCATATAAAA GAAAGAAAAT GCTCGGTTTT ACGCGCGTCA
GCAGTCAAAA CGACCTTCTC GCGCTCTTTA CACATAGTAC
AAAAGAATAA AGAGGTGGGA AGTTGACGGG
(7) plain flower Radix Codonopsis Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-0093-04) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTGCACC
CCCCTTTTGC TGTTTTTTT TACTCAGCCT ACTTTAAGAA
ACCATATAAA AGAAAGAAAA TCCTCGGTTT TGGGCGCGT
GAGCAGTCAA AACGACCTTC TCGCGCTCTT TAGAGATAGT
TCAAAAGAAT AAAGAGGAGG GAAGTTGACG GG
(8) plain flower Radix Codonopsis Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-0093-05) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTGCACC
CCCCTTTTGC TATTTTTTTT ACTCTGCCTA CATTAAGAAA
CGATATAAAA GAAAGAAAAT GCTCGGTTTT GGGCGAGTCA
GCAGTCAAAA GGACCTTCTC GCGGTCTTTA GAGATTGTAC
AAAAGAATAA AGCGGAGGGA AGTTGACGGG
(9) radix codonpsis tangshen Codonopsis tanghshen Oliv. sample (numbering CMED-0101-01) 5SrDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTCAACTCCC
CCCCCTTTTG CTGTTTTGTT TTACTCAGCG TACATTAAGA
AACCATATAA ACTGCTCACG CGCTCAAAAC CGGGCATTTT
CTTTCTCATA AACGACCTTC TAGTACGCTC TTTAGAGATA
GTACAAAAGA ATAAAGAGGA GGGAAGTTGA CGGG
(10) radix codonpsis tangshen Codonopsis tangshen Oliv. sample (numbering CMED-0101-02) 5SrDNA sequence:
CTAGGATGGG TGACCCCCTG GGAACCCCTC GTCAAGTCCC
CCCCCTTTTG GTGTTTTGTT TTACTCACCG TACATTAAGA
AACCTTATAA AGTGCTCACG CGGTCAAAAC CGGCCATTTT
CTTTCTCAAA AACGACCTTC TAGTACGGGC TTTAGAGATA
CTACAAAAGA ATAAAGAGCA GGGAAGTTGA CGGG
(11) radix codonpsis tangshen Codonopsis tangshen Oliv. sample (numbering CMED-0101-05) 5SrDNA sequence:
CTAGGATGGG TGGCCCCCTG GCAAGTCCTC GTCAAGTCCC
CCCCCTTTTG GTGTTTTGTT TTTCTCAGCG TACGTTAAGA
AACCATATAA AGGGCTCACG CGGTCAAAAC CGGGCGTTTT
CTTTCTAATA AACTGCCTTC TAGTAGGCTC TTTAGACATA
GTAGAAAAGA ATAAAGAGCA GGGAAGTTGA CGGG
(12) pipe flower Radix Codonopsis Codonopsis tubelosa Kom. sample (numbering CMED-0102-01) 5S rDNA sequence:
CTAGGACTGC TCACGGCCCG AAAAGTCCGA GCATTTTTCT
TTCTTTTATA CTGGTTTCTT AATGTACGGT GAGTAAAAAA
ACAGCAAAAG GGGGGGTGCA ACACGAGGTT CCCAGGGGGT
CACCCATCCT AATACTACTC TCGCCCTCAT TTGAGTTCGT
ACAAAACGAC CATATGGGAG AGGAGTTGAC GGG
(13) pipe flower Radix Codonopsis Codonopsis tubelosa Kom. sample (numbering CMED-0102-02) 5S rDNA sequence:
CTAGGACTGC TCACGGCCCG AAAAGTCCTA GCATGTTTCT
TTCTTTTATA CTGTTTTCTT ACTGTACGGT GACTAAAAAA
ACAGCTAAAG GGGGGGTGCT ACACGAGGTC GCCAGGGGGA
CACGCATCCT AATACGACTC TCTCCCTCAT TTTAGTTCGT
ACAAAACTAC AAAAAGGGAG AGAAGTTGAC GGG
(14) Codonopsis of codonopsis clematidea Clarke clematidea (Schyenk) C.B.Cl. sample (numbering CMED-0109-01) 5S rDNA sequence:
CTAGGATGGT CGACCATATG GGAAAGCTTC GCGTTTTTCT
CCCTTTTTGA GTTTTTTTTA GTGTCACCTA AATAAGGAAA
CCATTAAAAG AAAGAAACTA CACGAGGTTT TGGGGCCGTT
ATCCGCTCAC AAACTATTCT GGCATTCGTT TGGGATAGCA
TAAAAGACTA AAGCCGGGGG GAGTTGACGG G
(15) gray wool Radix Codonopsis Codonopsis canescens Nannf. sample (numbering CMED-0110-01) 5S rDNA sequence:
CTAGGACGCG GGAATTCGAG AAGAGTGCTG GTATGATCGC
ACCCGCTGTT TTTTTTCCTC TTTATTCTTT TGTACTATCT
CTAAAGAGCG CGAGAAGGTC CGGTTTTGAC TTCTCACGCG
CCCAAAACAA AACGAGCTTT TTGCCTTTCG TTTGAGACGG
TATAAAAGTA CGCTGAGGAG GGGAGTTGAC GGG
(16) globe daisy Radix Codonopsis Codonopsis subglobosa W.W.Sm sample (numbering CMED-0107-01) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTATGCACCC
GTTAACCCCC CCTTTTTTTG TTTTTTTTAC TATCTCTACG
TTAAGAAAAT GCTCGGTTTG ACTGCTCATG GGCGCGTGAG
CAGTCAAAAC GACCTTCTCG CGCTCTTTAG AGATATGTAC
AAAAGAATAA AGAGGAGGGG AGTTGACGGG
(17) globe daisy Radix Codonopsis Codonopsis subglobosa W.W.Sm sample (numbering CMED-0107-02) 5S rDNA sequence:
CTAGGATGGG TGTCCCCCTG GGAAGACCTC GTATGCACCC
CCTAACCCCC CCTTTTTTTG TTTTTTTTAC TATCGCAACG
TTAAGAAAAT GCTTCCTTTG ACTGCTGATG GGCGCGTCAG
CAATCAAAAC GTCCTTCTCG CGCACTTTAG AGATATGGAC
AAAAGAATAA AGAGGACGGG TGTTGACGGG
B. 3 samples of commodity Radix Codonopsis
(18) the Radix Codonopsis of plate party sample (numbering CMED-DS-8-DFH) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTTTTA GTCAACTATG
CCCGCTTTTG CTGTTTTGTT TTCCTCAGCG TTCTTTAAGA
ATCCATAAAG ACTGCTCACG GGCTCAAAAC CGGGCATTTT
CTTTCCCAAA ACCGAGCTTC TAGTTCGCTC TTTAGAGATA
GTACAAAAGA ATAAAGAGGA GGGAAGTTGA CGGG
(19) the anti-Radix Codonopsis of party sample (numbering CMED-DS-9-YH) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAATCTTC GTGTTGCACC
CCCCTTTTGC TGTTTTTTTT ACTAAACGGA CATTAAGAAG
CGAATAAAAG AAAGAAAATG CTCGGTTTTG AGCGCGAGAG
CAGTCAAAAA GAACTTCTCG CGGTTGTTTG AGATAGTATA
AAAGAATAAA GAGGAGGGAA GTTGACGGG
(20) the Radix Codonopsis of line party sample (numbering CMED-DS-10-YRS) 5SrDNA sequence:
CTAGGATGGG TGACTCCCTG GGAAGTCCTC GTGTTGCACC
CCCCTTTTGC TGTTTTTTTT ACTCACCGTA CATTAAGAAA
CCATATAAAA GAAAGAAAAA TGCTCGGTTT TGGGGCCGTG
AGCAGTCAAA ACGACCTTCT GGCGCTCGTT TGAGATAGTA
CAAAAGAATA AAGAGGAGGG GAGTTGACGG G
C. 3 samples are joined in the specialty goods Colorado Party
(21) Colorado Party ginseng Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-DS-7-XH) 5S rDNA sequence:
CTAGGATGGA TGACCCCCTG GGAAGTCCTC GTGTTGCACC
CCCCCTTTTG GTGTTTTTTT TACTCTGCGT ACATTAAGAA
ACGATATAAA AGAAAGAAAA TGCTGGGTTT TGGGCGCGTG
AGCAGTCAGA ACGACCTTGT CGCGCTCTTT AGAGATAGTA
CAAAAGAATA AAGAGGAGGG GAGTTGACGG G
(22) Colorado Party ginseng Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-DS-11-WYT) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTCGTC GTGTTGCACC
CCCCCTTTTG CTGTTTTTTT TACTGAGCGT ACATTAAGAA
ACCATGTAAA AGAAAGAAAA TGCTCGGTTT TGGGCCCGTG
AGCAGTCAAA ACGACGTTCT CGCGCTCTTT GAGATAGTAC
AAAAGAATAA AGAGGAGGGG AGTTGACGGG
(23) Colorado Party ginseng Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-DS-12-YRS) 5S rDNA sequence:
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTACACC
CCCCTTTTGC TGTTTTTTTT GCTCAGCGTA CATTAAGAAA
TCATGTAAAA GAAAGAAAAT GCTCGGTTTT GGGCGCCTGA
GCAGTCAAAA CGACCTTCTC GCGGTCTTTA GAGATAGTAC
AAAAGAATAA AGAGGAGGGG AGTTGACGGG
D. the pseudo-product leopard of Radix Codonopsis and 2 kinds of balloonflower root
(24) leopard Campanumoea javanica Blume ssp.japonica (Makino) Hong sample (numbering CMED-0108-01) 5S rDNA sequence:
CTAGGATGGG AGACACCCTG GTAAATCTTC GTGTTGCAAT
TCCCCTTTTG CTGTTTTTTT TACTAAACGG AGGTCTAGAA
GCGAATAAAA GAAAGAAAGA ATAACCATTT TTGAGGCTGA
GGTAAGGTCT GAAGAACTTC TGAAGGTTGT TTGAGGCCGT
ATAAAAATGT TCGAACAAGG GGAGTTGACG GG
(25) balloonflower root Platycodon grandiflorum (Jacq.) A.DC. sample (numbering CMED-0111-01) 5S rDNA sequence:
CTAGGATGGG TGACCTCCTG GGAAGGCCTC CTGTTGCACC
CCCCATTTTT TTTATTTAAT TTTTGATTTA TTTATGTTAT
CGGTAGGTCG TTTTTTTTGT AGCTGTTGGA ATCATATTGC
GTTTTGTGAG TGCGTTTATC CGTAATAATA GGGAGCGTAA
CGGTAAGGTT TCGGGTGTCG GGTCCGTAAC GGTTGAAACG
GGGAATCGTA ATGAGGGAAA ACGGTGGAAT TTCGGTTAAA
ATGGTAAAAG GATGTTGAAT AAAATGCAAT TTATGGTGAG
AGTATATGGG
Embodiment:
The measuring method of the 5S rDNA sequence of above-mentioned 25 samples comprises the following steps:
(1) collects plant sample, carry out cultivar identification work;
(2) from the plant that step (1) is selected, extract DNA;
(3) DNA that extracts with step (2) is a template, with the primer of oligonucleotide as polymerase chain reaction (PCR), and amplification 5S rDNA section, used primer picks up from the conservative section at plant 5SrDNA two ends respectively;
(4) using the cloning and sequencing technology checks order to the PCR product that is obtained in the step (3).
Each sample repeat at least to check order 3 times and the sequence of sample also internet page National Center for Biotechnology Information (NCBI) and EuropeanMolecular Biology Laboratory (EMBL) and other plant sequence make comparisons and verify to guarantee 25 sequences of the present invention accurate.
Mean difference at dna level between the sample of above-mentioned measured same kind is 6.2% to 9.9%, and the difference of 5S rDNA sequence is 26% to 60% between described Radix Codonopsis kind.And the difference of the 5S rDNA sequence of Radix Codonopsis and Campanumoea javanica is 37% to 57%.The difference of the 5S rDNA sequence of Radix Codonopsis and balloonflower root is 63% to 72%.
The present invention utilizes in the difference of 5S rDNA sequence plant in the Radix Codonopsis class plant and the comparison between kind, identifies different Radix Codonopsis kinds whereby and distinguishes its true and false.The method that is adopted comprises the following steps:
1. from plant sample, extract DNA;
2. the DNA that extracts with step 1 is a template, with oligonucleotide as polymerase chain reaction (PCR) primer, amplification 5S rDNA section, used primer picks up from the conservative section at plant 5S rDNA two ends respectively;
3. using the cloning and sequencing technology checks order to the PCR product that step 2 obtained;
4. the 5S rDNA sequence comparison of the dna sequence dna that step 3 is recorded and above-mentioned 18 Radix Codonopsis and Campanumoea javanica is with the Radix Codonopsis kind of identifying institute's measuring plants and tell truth from falsehood.
Describe described method in detail:
(1) extraction of DNA
DNA extraction method of plant and Draper and Scott (Draper and Scott, 1988) are described roughly the same, are summarized as follows: the exsiccant vegetable material is washed with 70% alcoholic acid distilled water solution, then, mix and grind into powder with liquid nitrogen.The powdered sample of gained and the CTAB of 6 times of volumes are extracted the damping fluid mixing, and insulation added chloroform-primary isoamyl alcohol (24: 1) mixed solution extracting of equivalent after 30 minutes in 56 ℃ of water-baths, and is centrifugal, gets supernatant liquor.The 10%CTAB solution that adds 0.1 volume in resistates, room temperature is placed after 10 minutes and extracted once with chloroform-primary isoamyl alcohol, and is centrifugal, gets supernatant liquor and mixes with last time supernatant liquor.The CTAB precipitation buffering liquid that adds equivalent in the gained supernatant liquor produces precipitation, and room temperature was placed after 1 hour with 13000g centrifugal 15 minutes.Be dissolved in the TE damping fluid (10mMTris-HCl, pH 7.5,1mM EDTA) after with ethanol purification the DNA throw out standby.
(2) pcr amplification reaction
The DNA of 5S rDNA section is obtained by pcr amplification reaction.The primer that reacts used is 5S2F and 5S2R:
The 5S2F sequence is: 5 ' GTG CTT GGG CGA GAG TAG TA
The 5S2R sequence is: 5 ' TTA GTG CTG GTA TGA TCG CA
Reaction soln comprises: 10ng DNA of plants, 1XTag buffered soln (10mMTris-HCl, pH8.3,0.001% gelatin), 0.2mM dNTPs, 1 μ M primer, and the Taq DNA polymerase of 1 unit.Reaction conditions is: in 94 ℃ of pre-treatment 5 minutes, carry out 35 circulations then, cycling condition is: 94 ℃, and 1 minute, 60 ℃, 1 minute, 72 ℃, 2 minutes; Last 72 ℃, 10 minutes.
(3) cloning and sequencing technology
(Bio 101, USA) carry out purifying with DNA purification kit GENCLEAN IIIKit for the PCR product that step (2) is obtained.Take out the PCR fragment of 1 μ l (about 50ng) purifying, with clone test kit TA cloning Kit (pGEM-T Easy Vector Systems, Promega, USA) with this PCR fragment cloning to carrier.After transformant is cultivated, with plasmid purification test kit Rapid Plasmid Miniprep System (Marligen Bioscience, Germany) plasmid purification.Order-checking is by reaction kit ABI Prism BigDye Terminator CycleSequencing Ready Reaction Kit (PE Biosystems, USA) and genetic analyzer Genetic analyzer (ABI Prism 3100, Applied Biosystems USA) carries out.(Perkin Elmer is USA) with DNAsis version 7.00 (Hitachi, Japan) dna sequence dna of analysis and definite sample to use sequence analysis software Sequencing Analysis version 3.0 at last.
(4) dna sequence dna relatively
Sequence is stored with the Fasta form, use sequence analysis software BioEdit version7.0.1 (Isis Pharmaceuticals then, USA) sort and calculated difference per-cent, the result imports Excel 2002 (Microsoft Corporation, USA) analysis that takes statistics again.
(5) evaluation of tested plant sample
The 5S rDNA sequence of institute's test sample product and the DNA standard of all Radix Codonopsis kinds disclosed by the invention are compared as stated above one by one.As find that the sequence of this plant sample and certain Radix Codonopsis 5S rDNA sequence calibration are complementary, that is to say that its sequence difference is less than 9.9%, i.e. tested plant sample of susceptible of proof and Radix Codonopsis, and with calibration (Radix Codonopsis) be same kind.On the contrary, as all not being complementary by the 5S rDNA sequence of measuring plants and any one Radix Codonopsis standard DNA sequence, then this tested plant variety of explanation is not a Radix Codonopsis.
If which kind of pseudo-product or surrogate thinks further to understand this is by the measuring plants product, then the sequence of its sequence and several pseudo-product disclosed by the invention and surrogate can be compared, as finding coupling, illustrate promptly this sample is to belong to which kind of pseudo-product or surrogate.
Therefore, adopt dna sequence dna and the authentication method of the 5S rDNA of Radix Codonopsis provided by the invention, the comparison of the dna sequence dna by its 5S rDNA makes convenient and reliable to the evaluation of Chinese medicine Radix Codonopsis.
Sequence table
<210>SEQ?ID?NO:1
<211>LENGTH:210
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?(Franch.)?Nannf?1
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:1
CTAGGATGGG TGACCCCCTG GGAAGTGCTG GTATGCACCC GTCAACTCCC CTCCTCTTTA
60
TTCTTTGTAC TATCTCTAAA CCATATAAGA AGGTCGTTTT GACTGCTCAC GCGCCCAAAA
120
CCGAGCAAAA CGACCTTTTC GCGCTCTTTC TTAATGTACG CTGAGTAAAA AAAAGGAGGG
180
AAGTTGACGG G
191
<210>SEQ?ID?NO:2
<211>LENGTH:211
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?(Franch.)?Nannf?2
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:2
CTAGGATGGG TGACCCCCTG GGAAGTGCTG GTATGCACCC GTCAAGTCCC CTCCTCTTTA
60
TTGTTTGTAC TATCTCTAAA?CCATATAAGA AGGTCGTTTT GACTGCACAC GCGCCCAAAA
120
CCGAGCAAAA?TGACCTTTTC GCGCTCTTTC TTAATGTACG CTGAGTAAAA AAAAGGAGGG
180
AAGTTGACGG G
191
<210>SEQ?ID?NO:3
<211>LENGTH:210
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?(Franch.)?Nannf?3
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:3
CTAGGATGGG TGACCCCCTG GGAAGTGCTG GTATCCACCC GTCAACTCCC CTCCTCTTTA
60
TTCTTGGTAC TATCTCTAAA CCATATAAGA AGGTCGTTAT GACTGCTGAC GCGCCCAAAA
120
GCGAGCAAAA CGTGCTTTTC GCGCTCTTAA TTATTGTACG GTGAGCAAAA AAAAGGAGGG
180
AAGTTGACGG G
191
<210>SEQ?ID?NO:4
<211>LENGTH:210
<212>TYpE:DNA
<213>ORGANISM:Codonopsis?pilosula?(Franch.)?Nannf?4
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:4
CTAGGATGGG TGACCCCCAG GGAAGTGCTG GTATGCACCG GTCAAGTCCC CTCCTCTTTA
60
TTCTTTGTAA CATCTCTAAA CCATATAAGA AGGTCGTTTT GACTGCTCAC GCGCCCAAAA
120
CCGAGCAAAA CGACCTTTTC GCGCTCTTGT TTAATGCGCG CTGAGTAAAA AAAAGGAGGG
180
AAGTTGACGG G
191
<210>SEQID?NO:5
<211>LENGTH:208
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?var.?Modesta?(Nannf.)?L.T.Shen?5
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:5
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTGCACC CCCCTTTTGC TGTTTTTTTT
60
ACTCAGCGTA CATTAAGAAA CCATATAAAA GAAAGAAAAT GCTCGGTTTT GGGCGCGTGA
120
GCAGTCAAAA CGACCTTCTC GCGCTCTTTA GAGATAGTAC AAAAGAATAA AGAGGAGGGA
180
AGTTGACGG G
190
<210>SEQ?ID?NO:6
<211>LENGTH:208
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?var.?Modesta?(Nannf.)?L.T.Shen?6
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:6
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTGCAGC CCCCTTTTGC TCTTTTTTTT
60
AATCAGCGTA CATTAACAAA CCATATAAA GAAAGAAAT GCTCGGTTTT ACGCGCGTCA
120
GCAGTCAAAA CGACCTTCTC GCGCTCTTTA CACATAGTAC AAAAGAATAA AGAGGTGGGA
180
AGTTGACGGG
190
<210>SEQID?NO:7
<211>LENGTH:209
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?var.?Modesta?(Nannf.)?L.T.Shen?7
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:7
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTGCACC CCCCTTTTGC TGTTTTTTTT
60
ACTCAGCCTA CTTTAAGAAA CCATATAAAA GAAAGAAAAT CCTCGGTTTT GGGCGCGTGA
120
GCAGTCAAAA CGACCTTCTC GCGCTCTTTA GAGATAGTTC AAAAGAATAA AGAGGAGGGA
180
AGTTGACGGG
190
<210>SEQ?ID?NO:8
<211>LENGTH:208
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?var.?Modesta?(Nannf.)?L.T.Shen?8
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:8
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTGCACC CCCCTTTTGC TATTTTTTTT
60
ACTCTGCCTA CATTAAGAAA CGATATAAAA GAAAGAAAAT GCTCGGTTTT GGGCGAGTCA
120
GCAGTCAAAA GGACCTTCTC GCGGTCTTTA GAGATTGTAC AAAAGAATAA AGCGGAGGGA
180
AGTTGACGGG
190
<210>SEQ?ID?NO:9
<211>LENGTH:213
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?tangshen?Oliv.9
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:9
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTCAACTCCC CCCCCTTTTG CTGTTTTGTT
60
TTACTCAGCG TACATTAAGA AACCATATAA ACTGCTCACG CGCTCAAAAC CGGGCATTTT
120
CTTTCTCATA AACGACCTTC TAGTACGCTC TTTAGAGATA GTACAAAAGA ATAAAGAGGA
180
GGGAAGTTGA CGGG
194
<210>SEQID?NO:10
<211>LENGTH:213
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?tangshen?Oliv.10
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:10
CTAGGATGGG TGACCCCCTG GGAACCCCTC GTCAAGTCCC CCCCCTTTTG GTGTTTTGTT
60
TTACTCACCG TACATTAAGA AACCTTATAA AGTGCTCACG CGGTCAAAAC CGGCCATTTT
120
CTTTCTCAAA AACGACCTTC TAGTACGGGC TTTAGAGATA CTACAAAAGA ATAAAGAGCA
180
GGGAAGTTGA CGGG
194
<210>SEQID?NO:11
<211>LENGTH:213
<212>TYPE:DNA
<213>ORGANISM:Codonopsis tangshen?Oiv.11
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:11
CTAGGATGGG TGGCCCCCTG GCAAGTCCTC GTCAAGTCCC CCCCCTTTTG GTGTTTTGTT
60
TTTCTCAGCG TACGTTAAGA AACCATATAA AGGGCTCACG CGGTCAAAAC CGGGCGTTTT
120
CTTTCTAATA AACTGCCTTC TAGTAGGCTC TTTAGACATA GTAGAAAAGA ATAAAGAGCA
180
GGGAAGTTGA CGGG
194
<210>SEQID?NO:12
<211>LENGTH:212
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?tubelosa?Kom.12
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:12
CTAGGACTGC TCACGGCCCG AAAAGTCCGA GCATTTTTCT TTCTTTTATA CTGGTTTCTT
60
AATGTACGGT GAGTAAAAAA ACAGCAAAAG GGGGGGTGCA ACACGAGGTT CCCAGGGGGT
120
CACCCATCCT AATACTACTC TCGCCCTCAT TTGAGTTCGT ACAAAACGAC CATATGGGAG
180
AGGAGTTGAC GGG
193
<210>SEQ?ID?NO:13
<211>LENGTH:212
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?tubelosa?Kom.13
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:13
CTAGGACTGC TCACGGCCCG AAAAGTCCTA GCATGTTTCT TTCTTTTATA CTGTTTTCTT
60
ACTGTACGGT GACTAAAAAA ACAGCTAAAG GGGGGGTGCT ACACGAGGTC GCCAGGGGGA
120
CACGCATCCT AATACGACTC TCTCCCTCAT TTTAGTTCGT ACAAAACTAC AAAAAGGGAG
180
AGAAGTTGAC GGG
193
<210>SEQID?NO:14
<211>LENGTH:210
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?clematidea?(Schyenk)?C.B.Cl.14
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:14
CTAGGATGGT CGACCATATG GGAAAGCTTC GCGTTTTTCT CCCTTTTTGA GTTTTTTTTA
60
GTGTCACCTA AATAAGGAAA CCATTAAAAG AAAGAAACTA CACGAGGTTT TGGGGCCGTT
120
ATCCGCTCAC AAACTATTCT GGCATTCGTT TGGGATAGCA TAAAAGACTA AAGCCGGGGG
180
GAGTTGACGG G
191
<210>SEQID?NO:15
<211>LENGTH:212
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?canescens?Nannf.15
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:15
CTAGGACGCG GGAATTCGAG AAGAGTGCTG GTATGATCGC ACCCGCTGTT TTTTTTCCTC
60
TTTATTCTTT TGTACTATCT CTAAAGAGCG CGAGAAGGTC CGGTTTTGAC TTCTCACGCG
120
CCCAAAACAA AACGAGCTTT TTGCCTTTCG TTTGAGACGG TATAAAAGTA CGCTGAGGAG
180
GGGAGTTGAC GGG
193
<210>SEQID?NO:16
<211>LENGTH:208
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?subglobosa?W.W.Sm?16
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:16
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTATGCACCC GTTAACCCCC CCTTTTTTTG
60
TTTTTTTTAC TATCTCTACG TTAAGAAAAT GCTCGGTTTG ACTGCTCATG GGCGCGTGAG
120
CAGTCAAAAC GACCTTCTCG CGCTCTTTAG AGATATGTAC AAAAGAATAA AGAGGAGGGG
180
AGTTGACGGG
190
<210>SEQID?NO:17
<211>LENGTH:208
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?subglobosa?W.W.Sm?17
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:17
CTAGGATGGG TGTCCCCCTG GGAAGACCTC GTATGCACCC CCTAACCCCC CCTTTTTTTG
60
TTTTTTTTAC TATCGCAACG TTAAGAAAAT GCTTCCTTTG ACTGCTGATG GGCGCGTCAG
120
CAATCAAAAC GTCCTTCTCG CGCACTTTAG AGATATGGAC AAAAGAATAA AGAGGACGGG
180
TGTTGACGGG
190
<210>SEQID?NO:18
<211>LENGTH:213
<212>TYPE:DNA
<213>ORGANISM:Radix?Codonopsis?18
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:18
CTAGGATGGG TGACCCCCTG GGAAGTTTTA GTCAACTATG CCCGCTTTTG CTGTTTTGTT
60
TTCCTCAGCG TTCTTTAAGA ATCCATAAAG ACTGCTCACG GGCTCAAAAC CGGGCATTTT
120
CTTTCCCAAA ACCGAGCTTC TAGTTCGCTC TTTAGAGATA GTACAAAAGA ATAAAGAGGA
180
GGGAAGTTGA CGGG
194
<210>SEQ?ID?NO:19
<211>LENGTH:207
<212>TYPE:DNA
<213>ORGANISM:Radix?Codonopsis?19
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:19
CTAGGATGGG TGACCCCCTG GGAAATCTTC GTGTTGCACC CCCCTTTTGC TGTTTTTTTT
60
ACTAAACGGA CATTAAGAAG CGAATAAAAG AAAGAAAATG CTCGGTTTTG AGCGCGAGAG
120
CAGTCAAAAA GAACTTCTCG CGGTTGTTTG AGATAGTATA AAAGAATAAA GAGGAGGGAA
180
GTTGACGGG
189
<210>SEQID?NO:20
<211>LENGTH:210
<212>TYPE:DNA
<213>ORGANISM:Radix?Codonopsis?20
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:20
CTAGGATGGG TGACTCCCTG GGAAGTCCTC GTGTTGCACC CCCCTTTTGC TGTTTTTTTT
60
ACTCACCGTA CATTAAGAAA CCATATAAAA GAAAGAAAAA TGCTCGGTTT TGGGGCCGTG
120
AGCAGTCAAA ACGACCTTCT GGCGCTCGTT TGAGATAGTA CAAAAGAATA AAGAGGAGGG
180
GAGTTGACGG G
191
<210>SEQ?ID?NO:21
<211>LENGTH:210
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?var.?Modesta?(Nannf.)?L.T.Shen?21
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:21
CTAGGATGGA TGACCCCCTG GGAAGTCCTC GTGTTGCACC CCCCCTTTTG GTGTTTTTTT
60
TACTCTGCGT ACATTAAGAA ACGATATAAA AGAAAGAAAA TGCTGGGTTT TGGGCGCGTG
120
AGCAGTCAGA ACGACCTTGT CGCGCTCTTT AGAGATAGTA CAAAAGAATA AAGAGGAGGG
180
GAGTTGACGG G
191
<210>SEQ?ID?NO:22
<211>LENGTH:208
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?var.?Modesta?(Nannf.)?L.T.Shen?22
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:22
CTAGGATGGG TGACCCCCTG GGAAGTCGTC GTGTTGCACC CCCCCTTTTG CTGTTTTTTT
60
TACTGAGCGT ACATTAAGAA ACCATGTAAA AGAAAGAAAA TGCTCGGTTT TGGGCCCGTG
120
AGCAGTCAAA ACGACGTTCT CGCGCTCTTT GAGATAGTAC AAAAGAATAA AGAGGAGGGG
180
AGTTGACGGG
190
<210>SEQ?ID?NO:23
<211>LENGTH:208
<212>TYPE:DNA
<213>ORGANISM:Codonopsis?pilosula?var.?Modesta?(Nannf.)?L.T.Shen?23
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:23
CTAGGATGGG TGACCCCCTG GGAAGTCCTC GTGTTACACC CCCCTTTTGC TGTTTTTTTT
60
GCTCAGCGTA CATTAAGAAA TCATGTAAAA GAAAGAAAAT GCTCGGTTTT GGGCGCCTGA
120
GCAGTCAAAA CGACCTTCTC GCGGTCTTTA GAGATAGTAC AAAAGAATAA AGAGGAGGGG
180
AGTTGACGGG
190
<210>SEQ?ID?NO:24
<211>LENGTH:211
<212>TYPE:DNA
<213>ORGANISM:Campanumoea?javanica?Blume?ssp.?japonica?(Makino)?Hong?24
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:24
CTAGGATGGG AGACACCCTG GTAAATCTTC GTGTTGCAAT TCCCCTTTTG CTGTTTTTTT
60
TACTAAACGG AGGTCTAGAA GCGAATAAAA GAAAGAAAGA ATAACCATTT TTGAGGCTGA
120
GGTAAGGTCT GAAGAACTTC TGAAGGTTGT TTGAGGCCGT ATAAAAATGT TCGAACAAGG
180
GGAGTTGACG GG
192
<210>SEQ?ID?NO:25
<211>LENGTH:319
<212>TYPE:DNA
<213>ORGANISM:Platycodon?grandiflorum?(Jacq.)?A.DC.25
<223>OTHER?INFORMATION:5S?rDNA?Spacer
<400>SEQUENCE:25
CTAGGATGGG TGACCTCCTG GGAAGGCCTC CTGTTGCACC CCCCATTTTT TTTATTTAAT
60
TTTTGATTTA TTTATGTTAT CGGTAGGTCG TTTTTTTTGT AGCTGTTGGA ATCATATTGC
120
GTTTTGTGAG TGCGTTTATC CGTAATAATA GGGAGCGTAA CGGTAAGGTT TCGGGTGTCG
180
GGTCCGTAAC GGTTGAAACG GGGAATCGTA ATGAGGGAAA ACGGTGGAAT TTCGGTTAAA
240
ATGGTAAAAG GATGTTGAAT AAAATGCAAT TTATGGTGAG AGTATATGGG
290

Claims (9)

1. method of identifying the Radix Codonopsis kind, it is characterized in that, use one or more dna sequence dnas that are selected from the calibration group, the 5S rDNA of sample to be identified is compared as calibration, thereby obtain the sequence difference per-cent of this sample and calibration, used calibration group comprises following dna sequence dna:
(1) the 5S rDNA sequence of Radix Codonopsis Codonopsis pilosula (Franch.) Nannf. sample (numbering CMED-0038-04), this sequence is shown in SEQ ID NO.1;
(2) the 5S rDNA sequence of Radix Codonopsis Codonopsis pilosula (Franch.) Nannf. sample (numbering CMED-0038-05), this sequence is shown in SEQ ID NO.2;
(3) the 5S rDNA sequence of Radix Codonopsis Codonopsis pilosula (Franch.) Nannf. sample (numbering CMED-0038-08), this sequence is shown in SEQ ID NO.3;
(4) the 5S rDNA sequence of Radix Codonopsis Codonopsis pilosula (Franch.) Nannf. sample (numbering CMED-0038-12), this sequence is shown in SEQ ID NO.4;
(5) the 5S rDNA sequence of plain flower Radix Codonopsis Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-0093-01), this sequence is shown in SEQ IDNO.5;
(6) the 5S rDNA sequence of plain flower Radix Codonopsis Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-0093-03), this sequence is shown in SEQ IDNO.6;
(7) the 5S rDNA sequence of plain flower Radix Codonopsis Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-0093-04), this sequence is shown in SEQ IDNO.7;
(8) the 5S rDNA sequence of plain flower Radix Codonopsis Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-0093-05), this sequence is shown in SEQ IDNO.8;
(9) the 5S rDNA sequence of radix codonpsis tangshen Codonopsis tangshen Oliv. sample (numbering CMED-0101-01), this sequence is shown in SEQ ID NO.9;
(10) the 5S rDNA sequence of radix codonpsis tangshen Codonopsis tangshen Oliv. sample (numbering CMED-0101-02), this sequence is shown in SEQ ID NO.10;
(11) the 5S rDNA sequence of radix codonpsis tangshen Codonopsis tangshen Oliv. sample (numbering CMED-0101-05), this sequence is shown in SEQ ID NO.11;
(12) the 5S rDNA sequence of pipe flower Radix Codonopsis Codonopsis tubelosa Kom. sample (numbering CMED-0102-01), this sequence is shown in SEQ ID NO.12;
(13) the 5S rDNA sequence of pipe flower Radix Codonopsis Codonopsis tubelosa Kom. sample (numbering CMED-0102-02), this sequence is shown in SEQ ID NO.13;
(14) the 5S rDNA sequence of the Codonopsis of codonopsis clematidea Clarke clematidea (Schyenk) C.B.C1. sample (numbering CMED-0109-01), this sequence is shown in SEQ ID NO.14;
(15) the 5S rDNA sequence of gray wool Radix Codonopsis Codonopsis canescens Nannf. sample (numbering CMED-0110-01), this sequence is shown in SEQ ID NO.15;
(16) the 5S rDNA sequence of globe daisy Radix Codonopsis Codonopsis subglobosa W.W.Sm sample (numbering CMED-0107-01), this sequence is shown in SEQ ID NO.16;
(17) the 5S rDNA sequence of globe daisy Radix Codonopsis Codonopsis subglobosa W.W.Sm sample (numbering CMED-0107-02), this sequence is shown in SEQ ID NO.17;
(18) the 5S rDNA sequence of the Radix Codonopsis of plate party sample (numbering CMED-DS-8-DFH), this sequence is shown in SEQ ID NO.18;
(19) the 5SrDNA sequence of the anti-Radix Codonopsis of party sample (numbering CMED-DS-9-YH), this sequence is shown in SEQ ID NO.19;
(20) the 5S rDNA sequence of the Radix Codonopsis of line party sample (numbering CMED-DS-10-YRS), this sequence is shown in SEQ ID NO.20;
(21) the 5S rDNA sequence of Colorado Party ginseng Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-DS-7-XH), this sequence is shown in SEQ ID NO.21;
(22) the 5S rDNA sequence of Colorado Party ginseng Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-DS-11-WYT), this sequence is shown in SEQ IDNO.22;
(23) the 5S rDNA sequence of Colorado Party ginseng Codonopsis pilosula var.Modesta (Nannf.) L.T.Shen sample (numbering CMED-DS-12-YRS), this sequence is shown in SEQ IDNO.23;
(24) the 5S rDNA sequence of leopard Campanumoea javanica Blume ssp.japonica (Makino) Hong sample (numbering CMED-0108-01), this sequence is shown in SEQ IDNO.24; With
(25) the 5S rDNA sequence of balloonflower root Platycodon grandiflorum (Jacq.) A.DC. sample (numbering CMED-0111-01), this sequence is shown in SEQ ID NO.25.
2. the method for claim 1, it is characterized in that, further comprise a determining step, this determining step is according to a difference thresholding (threshold), sequence difference per-cent can tentatively judge then that less than this thresholding this sample and calibration are same kinds between sample and calibration.
3. method as claimed in claim 2 is characterized in that, described difference thresholding is between 8% to 12%.
4. method as claimed in claim 3 is characterized in that, described difference thresholding is 9.9%.
5. the method for claim 1 is characterized in that, this method comprises following concrete steps:
(a) from sample to be identified, extract DNA;
(b) be template with above-mentioned DNA, and be primer, use polymerase chain reaction (PCR) amplification 5S rDNA section with suitable oligonucleotide;
(c) the 5S rDNA section to above-mentioned amplification carries out sequencing;
(d) above-mentioned institute test sample product sequence and one or more dna sequence dnas that is selected from the calibration group are compared, and calculate difference percentage between it; With
(e) according to above-mentioned difference percentage judge this identified sample whether be same sample than calibration.
6. method as claimed in claim 5 is characterized in that, described primer is 5S2F, and its sequence is 5 ' GTG CTT GGG CGA GAG TAG TA and 5S2R, and its sequence is 5 ' TTA GTG CTG GTA TGA TCG CA.
7. method as claimed in claim 6 is characterized in that, the judgement of step (e) realizes that according to a difference thresholding sequence difference per-cent can tentatively judge then that less than this thresholding this sample and calibration are same kinds between sample and calibration.
8. method as claimed in claim 7 is characterized in that, described difference thresholding is between 8% to 12%.
9. method as claimed in claim 8 is characterized in that, described difference thresholding is 9.9%.
CN 200510022871 2005-12-13 2005-12-13 Appraisement of Tangshen variety Pending CN1982469A (en)

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Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN103131781A (en) * 2013-02-28 2013-06-05 中国科学院成都生物研究所 PCR detection method of DNA of biological counterfeit drug in Chinese patent drug
CN113109485A (en) * 2021-04-14 2021-07-13 云南中医药大学 Method for identifying white cloud ginseng and codonopsis pilosula

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN103131781A (en) * 2013-02-28 2013-06-05 中国科学院成都生物研究所 PCR detection method of DNA of biological counterfeit drug in Chinese patent drug
CN103131781B (en) * 2013-02-28 2015-10-28 中国科学院成都生物研究所 The PCR detection method of biological species adulterant DNA in Chinese patent medicine
CN113109485A (en) * 2021-04-14 2021-07-13 云南中医药大学 Method for identifying white cloud ginseng and codonopsis pilosula

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