CN1475495A - Ethylene response conjugated protein transcription factor of ice plant and its coded gene and application - Google Patents
Ethylene response conjugated protein transcription factor of ice plant and its coded gene and application Download PDFInfo
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- Peptides Or Proteins (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Abstract
A vinylrespondent binin-transcription factor McEREB of cryophyte and its coding gene are disclosed. Said McEREB is the protein having the residue sequence of amino acid of sequence 2 in sequence table. Its coding gene is one of such neucleotide sequences: the DNA sequence of sequence 1 in sequence table and the DNA sequence with more than 90% of homology with the DNA sequence limited by sequence 1 in sequence table and coding the same function protein. Said gene can be used to culture the stress-resistant plant.
Description
Technical field
The present invention relates to plant transcription factor and encoding gene thereof and application, particularly derive from transcription factor and the encoding gene and the application of ice plant.
Background technology
Biologies such as cause of disease, arid, saline and alkaline, low temperature and the abiotic environment factor of coercing have material impact to growth and development of plant.Under the environment stress environment, a series of physio-biochemical characteristics can take place in the plant materials usually change.Plant experienced the variation of external environment before this by number of ways, and extracellular signal transferred to cell interior, chain reaction passes to transcription factor with signal through a series of phosphorylation level, transcription factor interacts by its specific function amino acid and goal gene again, startup produces the destination gene expression of replying to environment stress, thereby improves the resistance of plant.For example, some gene that contains the ERF class transcription factor in the conservative territory of ERF function can be accepted the environment-stress signal and start the adverse circumstance response gene, makes plant resistance to environment stress improve.Verified, ethene is one of regulatory factor of stress response, coercing the factor induces ethene intravital synthetic plant, some can be combined with the needed GCC zygote of a disease-resistant antigen gene expressed core sequence by the ethene inductive gene relevant with defence, and the expression that starts disease-resistant gene is especially having good characteristic performance to reach the degeneration-resistant effect of crop aspect the anti-plant bacterial plaque disease.
The ice plant of ice leaf Mesembryanthemum, being called for short ice plant (Mesembryanthemum crystallinum), is a kind of herbaceous plant that derives from Africa, has the function that stores juice, adverse-resistant characteristic from molecular biological angle research ice plant has important theory and realistic meaning.
Summary of the invention
The purpose of this invention is to provide the ethylene response conjugated protein transcription factor and the encoding gene thereof that derive from ice plant, this transcription factor has stronger degeneration-resistant and disease resisting effect.
The name of ethylene response conjugated protein transcription factor provided by the present invention is called McEREB, be protein, or the amino acid residue sequence of sequence 2 is passed through replacement, disappearance or the interpolation of one or several amino-acid residue and has identical active by sequence 2 deutero-protein with the amino acid residue sequence of sequence 2 with sequence 2 amino acid residue sequences in the sequence table.
The protein that sequence 2 amino acid residue sequences are made up of 282 amino-acid residues in the sequence table.The ERF function that is transcription factor McEREB from carbon teminal to 137-195 amino-acid residue of nitrogen end in the described sequence 2 is guarded the territory.
The encoding gene of ethylene response conjugated protein transcription factor McEREB is one of following nucleotide sequences:
1) dna sequence dna of sequence 1 in the sequence table;
2) with sequence table in the dna sequence dna that limits of sequence 1 have 90% above homology, and the identical function protein DNA sequence of encoding.
The dna sequence dna of sequence 1 is by 1205 based compositions in the sequence table, and the reading frame of this gene is the 113rd to the 959th bit base, and its expression is induced by the instantaneous of ethene, arid, low temperature and high salt mainly.
Gene with encoding transcription factor M cEREB provided by the present invention, use any carrier transformed plant that can guide foreign gene in plant, to express, can obtain transgenic cell line and transfer-gen plant that arid, low temperature and high-salt stress tolerance are enhanced.Gene of the present invention can add any enhancing promotor or inducible promoter in being building up to plant expression vector the time before its transcription initiation Nucleotide.For the ease of transgenic plant cells or plant being identified and screening, can process employed carrier, as adding the alternative mark of plant.Carry McEREB expression carrier of the present invention and can import vegetable cell by using conventional biotechnological meanss such as Ti-plasmids, Ri plasmid, plant viral vector, directly DNA conversion, microinjection, electroporation.
Can use the plant expression vector that comprises McEREB gene of the present invention to transform plant host, both can be monocotyledons, also can be dicotyledons, cultivates the plant variety of drought resisting, cold-resistant and anti-salt.Gene pairs of the present invention is cultivated the adversity resistant plant kind, and then the condition of improving the ecological environment, and it is significant to popularize township afforestation.
Description of drawings
Fig. 1 is the vivoexpression of McEREB gene in intestinal bacteria.
Fig. 2 is Southern hybridization analysis result.
Fig. 3 is the McEREB allelic expression that Northern hybridization detects under the different stress conditions.
Embodiment
The clone of embodiment 1, ice plant McEREB transcription factor cDNA and sequential structure analysis
Long 10 days ice plant seedling at room temperature places after cleaning on the filter paper of adequate thickness and dewatered 5 hours, collect plant and in liquid nitrogen, be ground to fine degree, place the 4mol/L guanidinium isothiocyanate, use acid phenol/chloroform extracting mixture again, get supernatant liquor, with the total RNA of isopropanol precipitating, repeat above-mentioned steps more once, RNA is dissolved in the DEPC water, (Davis etc. write to be stored in-80 ℃, molecular biological basic skills: [Basic Methods inMolecular Biology], pp.777, APPLETON ﹠amp; LANCE, Norwalk, Connecticut, USA, 1994).
Get the total RNA of 1 microgram and carry out pcr amplification reaction (I represents Trophicardyl in the primer) by 12 pairs of special degenerated primerses.Article 4, the 5 '-YRGVR-3 ' forward primer (Forward primers) corresponding to the conservative territory N-end of AP2/REBP is:
DF1：5’-TA(C/T)CGIGGIGTICGI-3’
DF2：5’-TA(C/T)AG(A/G)GGIGTICGI-3’
DF3：5’-TA(C/T)AG(A/G)GGIGTIAG(A/G)-3’
DF4：5’-TA(C/T)CGIGGIGTIAG(A/G)-3’
Article 4, guard reverse primer 5 '-ALLNFP-3 ' the Reverse primers of territory C-end corresponding to the AP2/EREBP of AtERF-1 and AtERF-2) be:
DR1：5’-IGG(A/G)AA(A/G)TTIAGICGIGC-3’
DR2：5’-IGG(A/G)AA(A/G)TTIAG(C/T)CTIGC-3’
DR3：5’-IGG(A/G)AA(A/G)TT(T/C)AA(T/C)CTIG?C-3’
DR4：5’-IGG(A/G)AA(A/G)TT(T/C)AAICGIGC-3’
The PCR condition is: 4 ℃, and 3 minutes; 94 ℃ 30 seconds, 60 ℃ 30 seconds, 72 ℃ 1.5 minutes, 30 the circulation; 72 ℃, 10 minutes; 4 ℃ of preservations.The PCR product is connected to and is used for order-checking on the pMD18-T carrier, is that template utilizes a pair of Auele Specific Primer DFR:5 '-CCGGACACCGCGGTAGTG-3 ' and DRF:5 '-GCATTGTTGAAC TTTCCG-3 ' to hold by the 5 ' end and 3 ' of reverse transcription PCR reaction amplifying target genes again with the positive colony.External then packing Invitro-McEREB gene order, design a pair of Auele Specific Primer McF:5 '-ATGAGCTTAATCG CCAAT-3 ' McR:5 '-AGTAACTAATAACTGATC-3 ' McEREB-cDNA that increases again, the PCR product is connected in the pMD18-T carrier and checks order, one and the on all four cDNA clone of external packaging sequence have been obtained, called after McEREB is the sequence in the sequence table 1.It is 1205bp that this gene inserts fragment, contains the open reading frame (113 initial-959 stop) of 846bp, the polypeptide (sequence 2 in the sequence table) that 282 amino-acid residues of encoding are formed, and its 5 ' end is 112bp, 3 ' end non-coding region is 282bp.This gene contains a typical A P2/EREBP conserved domain, and this structural domain can interact and the expression of startup purpose adversity gene with the cis-acting elements of element responsive to ethylene GCC zygote core.
Embodiment 2, the vivoexpression of ice plant McEREB gene in a big bacillus are identified
According to the McEREB gene order that clones, utilize a pair of Auele Specific Primer McF:377 5 '-AAAAGAATTCCAATCCGGGTCAGAATCC-3 ' 394 and McR:895 5 '-AAAACTCGAGTTGCATTCCCTCCACCAC-3 ' 878, obtain one section cDNA fragment (519bp) that comprises the conservative territory of AP2/EREBP by PCR, and be inserted into corresponding EcoRI and the XhoI site of protein expression vector pGEX-4T-1, transform this fusion expression vector in intestinal bacteria, induce in intestinal bacteria through IPTG, SDS-PAGE detects and shows that this gene can carry out external accurate translation in intestinal bacteria, the polyacrylate hydrogel electrophoretic band as shown in Figure 1, M is Marker; 1, the 2nd, through the inductive bacterial strain; The 3rd, without the inductive bacterial strain.As can be seen from Figure 1, there is protein band to occur, do not have protein band to occur without the inductive bacterial strain through the inductive bacterial strain.
The number of copies analysis in ice plant of embodiment 3, McEREB gene
Utilization is carried out Southern hybridization analysis for probe with the ice plant genomic dna that digests through different restriction enzymes (EcoRV, PstI, XhoI, SalI) through the McEREB cDNA coding region of isotropic substance phosphorus-32 mark, and wash film through the rigorous degree of height, the result as shown in Figure 2, a hybrid belt appears in the DNA of each digestion except EcoRV, shows that the McEREB gene is a single copy gene or the homologous gene that low copy is arranged in genome.
Embodiment 4, the expression characteristic of ice plant McEREB gene under the environment stress condition.
The ice plant seedling in 2 week of growth places the aqueous solution of 4 ℃ of water, 250mM NaCl and the vinyl solution of 2mM to carry out illumination cultivation respectively, it is that ice plant seedling with 2 week of growth is placed on dehydration at room temperature on the filter paper that is enough to suck dry moisture only through washing that arid is handled, and respectively at 1 hour, 5 hours, 12 hours and sampling in 24 hours are extracted total RNA and McEREB cDNA probe and are carried out Northern hybridization check and analysis.The result as shown in Figure 3, wherein A is the result that arid is handled, B is the result of 4 ℃ of subzero treatment, C is the result that 250mM NaCl handles, D is the result that 2mM ethene is handled, as can be seen from Figure 3, transcribing of gene M cEREB induced by ethene and salt mainly, and different degree is subjected to arid and cryogenic instantaneous inducing.
＜160〉2＜210〉1＜211〉1205＜212〉DNA＜213〉 ( Mesembryanthemum crystallinum )＜400〉1cttacgtgaa acaaaattca attcaaattc aacggcttta agctgaaatt tgcgatacgc 60aattcaaaat ttacattttt gagctgaatt cgccaatact cagttggtaa agatgagctt 120aatcgccaat ttcgagtctg attttgctgt tcttgagtcg attcgacgac acttgttaga 180agattgggac ccacgagccg gagctccggc gataaccacc ggatccggcc cggtttatca 240ccggaattcg agcttcagca gcttataccc ttgtttgact gataactggg gtgagttgcc 300attgaaagaa gatgattcag aggatatggt tctttttggt gtgctccgag acgccgttca 360taccgggtgg tcgccgcaat ccgggtcaga atccgggtcc gggtctccgg cgccggtgac 420ggtcaagcct gagccggtcg attctccggt gagttcgccg gcgccggtta gggtcgccgg 480cggtgaggct ccggtggccg cagctccggc gagggggaag cactaccgcg gtgtccggag 540gaggccgtgg gggaagttcg cggctgagat ccgcgaccct gcgaagaacg gagcgcgtgt 600gtggctcgga acatttgaga cggcggagga cgcggcgttg gcctatgaec gggccgcctt 660ccggatgcgg gggtccaagg cattgttgaa ctttccgctc cgggtcaact cgggcgagcc 720cgacccggtc cggattacgt cgaagcggtc ctcgcccgag aggtccgtgt cgtcttcgtc 780gtcggaaagc gcctcgccta agaggaggaa gaaggaggag gtggtggttg ggccggtggc 840gggccaggcc aggccaggct tacaacaagt gggaaatgtg gtggagggaa tgcaagtggg 900agtgggatgt caagttggtg tggggacaat gccacttggc gatcagttat tagttactta 960agatattata aaaaaacaaa aaaaggaaag ggggtttgaa agaatggaat tctcattggg 1020gggaaaggtg atggccctta taaaaaaaac ctttcctggt ctcttaatga aaggccgctt 1080ttagggcagc acaaatcctc tgctagcaga gaattcggca cgaggctctg ctccatggag 1140tagtaggaat aaacactgtg ctagccggct aggtattggt gcaagtgcaa aaaaaaaaaa 1200aaaaa 1205＜210〉2＜211〉282＜212〉PRT＜213〉 ( Mesembryanthemum crystallinum )＜400〉2Met Ser Leu Ile Ala Asn Phe Glu Ser Asp Phe Ala Val Leu Glu
5 10 15Ser?Ile?Arg?Arg?His?Leu?Leu?Glu?Asp?Trp?Asp?Pro?Arg?Ala?Gly
20 25 30Ala?Pro?Ala?Ile?Thr?Thr?Gly?Ser?Gly?Pro?Val?Tyr?His?Arg?Asn
35 40 45Ser?Ser?Phe?Ser?Ser?Leu?Tyr?Pro?Cys?Leu?Thr?Asp?Asn?Trp?Gly
50 55 60Glu?Leu?Pro?Leu?Lys?Glu?Asp?Asp?Ser?Glu?Asp?Met?Val?Leu?Phe
65 70 75Gly?Val?Leu?Arg?Asp?Ala?Val?His?Thr?Gly?Trp?Ser?Pro?Gln?Ser
80 85 90Gly?Ser?Glu?Ser?Gly?Ser?Gly?Ser?Pro?Ala?Pro?Val?Thr?Val?Lys
95 100 105Pro?Glu?Pro?Val?Asp?Ser?Pro?Val?Ser?Ser?Pro?Ala?Pro?Val?Arg
110 115 120Val?Ala?Gly?Gly?Glu?Ala?Pro?Val?Ala?Ala?Ala?Pro?Ala?Arg?Gly
125 130 135Lys?His?Tyr?Arg?Gly?Val?Arg?Arg?Arg?Pro?Trp?Gly?Lys?Phe?Ala
140 145 150Ala?Glu?Ile?Arg?Asp?Pro?Ala?Lys?Asn?Gly?Ala?Arg?Val?Trp?Leu
155 160 165Gly?Thr?Phe?Glu?Thr?Ala?Glu?Asp?Ala?Ala?Leu?Ala?Tyr?Asp?Arg
170 175 180Ala?Ala?Phe?Arg?Met?Arg?Gly?Ser?Lys?Ala?Leu?Leu?Asn?Phe?Pro
185 190 195Leu?Arg?Val?Asn?Ser?Gly?Glu?Pro?Asp?Pro?Val?Arg?Ile?Thr?Ser
200 205 210Lys?Arg?Ser?Ser?Pro?Glu?Arg?Ser?Val?Ser?Ser?Ser?Ser?Ser?Glu
215 220 225Ser?Ala?Ser?Pro?Lys?Arg?Arg?Lys?Lys?Glu?Glu?Val?Val?Val?Gly
230 235 240Pro?Val?Ala?Gly?Gln?Ala?Arg?Pro?Gly?Leu?Gln?Gln?Val?Gly?Asn
245 250 255Val?Val?Glu?Gly?Met?Gln?Val?Gly?Val?Gly?Cys?Gln?Val?Gly?Val
260 265 270Gly?Thr?Met?Pro?Leu?Gly?Asp?Gln?Leu?Leu?Val?Thr
275 280 282
Claims (10)
1, ethylene response conjugated protein transcription factor McEREB, be protein, or the amino acid residue sequence of sequence 2 is passed through replacement, disappearance or the interpolation of one or several amino-acid residue and has identical active by sequence 2 deutero-protein with the amino acid residue sequence of sequence 2 with sequence 2 amino acid residue sequences in the sequence table.
2, transcription factor according to claim 1 is characterized in that: it is the protein with sequence 2 amino acid residue sequences in the sequence table.
3, transcription factor according to claim 2 is characterized in that: the ERF function that is transcription factor McEREB from the nitrogen end to 137-195 amino-acid residue of carbon teminal in the described sequence 2 is guarded the territory.
4, the encoding gene of ethylene response conjugated protein transcription factor McEREB is one of following nucleotide sequences:
1) dna sequence dna of sequence 1 in the sequence table;
2) with sequence table in the dna sequence dna that limits of sequence 1 have 90% above homology, and the identical function protein DNA sequence of encoding.
5, gene according to claim 4 is characterized in that: the encoding gene of described ethylene response conjugated protein transcription factor McEREB is the dna sequence dna of sequence 1 in the sequence table.
6, gene according to claim 5 is characterized in that: the reading frame of this gene is for holding the 113rd to the 959th bit base from 3 '.
7, contain the described expression carrier of claim 4.
8, the clone that contains the described gene of claim 4.
9, the application of the described gene of claim 4 in cultivating degeneration-resistant border plant variety.
10, application according to claim 9 is characterized in that: described adverse circumstance is drought injury, cold damage and salt damage.
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN 02128817 CN1216903C (en) | 2002-08-14 | 2002-08-14 | Ethylene response conjugated protein transcription factor of ice plant and its coded gene and application |
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| CN 02128817 CN1216903C (en) | 2002-08-14 | 2002-08-14 | Ethylene response conjugated protein transcription factor of ice plant and its coded gene and application |
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| CN1475495A true CN1475495A (en) | 2004-02-18 |
| CN1216903C CN1216903C (en) | 2005-08-31 |
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Cited By (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN100395337C (en) * | 2004-06-11 | 2008-06-18 | 中国农业科学院作物育种栽培研究所 | Plant ethylene response component binding protein and its coding gene |
| CN100395338C (en) * | 2004-06-11 | 2008-06-18 | 中国农业科学院作物育种栽培研究所 | Ethylene response component binding protein and its coding gene |
| CN100430415C (en) * | 2005-09-21 | 2008-11-05 | 中国农业科学院作物科学研究所 | Thinopyrum intermedium ERF-transcription factor and its coding gene and use |
| CN106179190A (en) * | 2016-08-11 | 2016-12-07 | 江苏开放大学 | A kind of modified alta-mud prepares aflatoxin B1the method of adsorbent |
| CN115161332A (en) * | 2022-06-28 | 2022-10-11 | 福建省农业科学院果树研究所 | VdERF2 gene of Vitis davidii, and coding protein and application thereof |
-
2002
- 2002-08-14 CN CN 02128817 patent/CN1216903C/en not_active Expired - Fee Related
Cited By (6)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN100395337C (en) * | 2004-06-11 | 2008-06-18 | 中国农业科学院作物育种栽培研究所 | Plant ethylene response component binding protein and its coding gene |
| CN100395338C (en) * | 2004-06-11 | 2008-06-18 | 中国农业科学院作物育种栽培研究所 | Ethylene response component binding protein and its coding gene |
| CN100430415C (en) * | 2005-09-21 | 2008-11-05 | 中国农业科学院作物科学研究所 | Thinopyrum intermedium ERF-transcription factor and its coding gene and use |
| CN106179190A (en) * | 2016-08-11 | 2016-12-07 | 江苏开放大学 | A kind of modified alta-mud prepares aflatoxin B1the method of adsorbent |
| CN115161332A (en) * | 2022-06-28 | 2022-10-11 | 福建省农业科学院果树研究所 | VdERF2 gene of Vitis davidii, and coding protein and application thereof |
| CN115161332B (en) * | 2022-06-28 | 2023-10-03 | 福建省农业科学院果树研究所 | Vitis spinosa VdERF2 gene and encoding protein and application thereof |
Also Published As
| Publication number | Publication date |
|---|---|
| CN1216903C (en) | 2005-08-31 |
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