CN117965473A - Dehydrogenase system and application thereof in preparation of P34HB - Google Patents
Dehydrogenase system and application thereof in preparation of P34HB Download PDFInfo
- Publication number
- CN117965473A CN117965473A CN202410370527.7A CN202410370527A CN117965473A CN 117965473 A CN117965473 A CN 117965473A CN 202410370527 A CN202410370527 A CN 202410370527A CN 117965473 A CN117965473 A CN 117965473A
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- Prior art keywords
- dehydrogenase
- gabd4
- adhp
- amino acid
- mutant
- Prior art date
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Links
- 101710088194 Dehydrogenase Proteins 0.000 title claims abstract description 30
- 238000002360 preparation method Methods 0.000 title claims description 5
- 108020002663 Aldehyde Dehydrogenase Proteins 0.000 claims abstract description 32
- 102000005369 Aldehyde Dehydrogenase Human genes 0.000 claims abstract description 30
- 102000007698 Alcohol dehydrogenase Human genes 0.000 claims abstract description 29
- 108010021809 Alcohol dehydrogenase Proteins 0.000 claims abstract description 28
- 241000894006 Bacteria Species 0.000 claims abstract description 15
- 101100108536 Rattus norvegicus Aldh3a1 gene Proteins 0.000 claims abstract description 11
- 101150061843 dhaT gene Proteins 0.000 claims abstract description 7
- 101100268630 Escherichia coli (strain K12) patD gene Proteins 0.000 claims abstract description 6
- 101100246459 Escherichia coli (strain K12) puuC gene Proteins 0.000 claims abstract description 6
- -1 gabD4 Proteins 0.000 claims abstract description 3
- 150000001413 amino acids Chemical class 0.000 claims description 27
- 235000004279 alanine Nutrition 0.000 claims description 25
- 239000013612 plasmid Substances 0.000 claims description 25
- 238000000855 fermentation Methods 0.000 claims description 24
- 230000004151 fermentation Effects 0.000 claims description 24
- 235000001014 amino acid Nutrition 0.000 claims description 20
- 125000003295 alanine group Chemical group N[C@@H](C)C(=O)* 0.000 claims description 13
- QNAYBMKLOCPYGJ-REOHCLBHSA-N L-alanine Chemical compound C[C@H](N)C(O)=O QNAYBMKLOCPYGJ-REOHCLBHSA-N 0.000 claims description 12
- 238000004519 manufacturing process Methods 0.000 claims description 11
- 239000002773 nucleotide Substances 0.000 claims description 11
- 125000003729 nucleotide group Chemical group 0.000 claims description 11
- 238000000034 method Methods 0.000 claims description 10
- 241000206596 Halomonas Species 0.000 claims description 7
- KDXKERNSBIXSRK-UHFFFAOYSA-N Lysine Natural products NCCCCC(N)C(O)=O KDXKERNSBIXSRK-UHFFFAOYSA-N 0.000 claims description 6
- 239000004472 Lysine Substances 0.000 claims description 6
- 108090000623 proteins and genes Proteins 0.000 claims description 4
- 241000607142 Salmonella Species 0.000 claims description 2
- 238000000338 in vitro Methods 0.000 claims description 2
- WERYXYBDKMZEQL-UHFFFAOYSA-N butane-1,4-diol Chemical compound OCCCCO WERYXYBDKMZEQL-UHFFFAOYSA-N 0.000 abstract description 16
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 abstract description 7
- 230000015572 biosynthetic process Effects 0.000 abstract description 7
- 229910052799 carbon Inorganic materials 0.000 abstract description 7
- 230000037353 metabolic pathway Effects 0.000 abstract description 5
- 108020005199 Dehydrogenases Proteins 0.000 abstract description 3
- 230000010354 integration Effects 0.000 abstract description 3
- 101710181816 Pyruvate-formate-lyase deactivase Proteins 0.000 abstract description 2
- 238000005457 optimization Methods 0.000 abstract description 2
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- 230000002195 synergetic effect Effects 0.000 abstract description 2
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- 108090000790 Enzymes Proteins 0.000 description 11
- 239000002609 medium Substances 0.000 description 11
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 10
- 230000003321 amplification Effects 0.000 description 10
- 241001454102 Halomonas lutescens Species 0.000 description 9
- 238000003199 nucleic acid amplification method Methods 0.000 description 9
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- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 7
- 238000006243 chemical reaction Methods 0.000 description 7
- 239000008103 glucose Substances 0.000 description 7
- CSNNHWWHGAXBCP-UHFFFAOYSA-L Magnesium sulfate Chemical compound [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 description 6
- 150000001299 aldehydes Chemical class 0.000 description 6
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- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Chemical compound O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 5
- SJZRECIVHVDYJC-UHFFFAOYSA-N 4-hydroxybutyric acid Chemical compound OCCCC(O)=O SJZRECIVHVDYJC-UHFFFAOYSA-N 0.000 description 4
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- XLYOFNOQVPJJNP-ZSJDYOACSA-N heavy water Substances [2H]O[2H] XLYOFNOQVPJJNP-ZSJDYOACSA-N 0.000 description 4
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- 229940006015 4-hydroxybutyric acid Drugs 0.000 description 3
- UXVMQQNJUSDDNG-UHFFFAOYSA-L Calcium chloride Chemical compound [Cl-].[Cl-].[Ca+2] UXVMQQNJUSDDNG-UHFFFAOYSA-L 0.000 description 3
- 241000588724 Escherichia coli Species 0.000 description 3
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 3
- 230000000694 effects Effects 0.000 description 3
- 238000001962 electrophoresis Methods 0.000 description 3
- 239000000499 gel Substances 0.000 description 3
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- 239000007788 liquid Substances 0.000 description 3
- 239000000203 mixture Substances 0.000 description 3
- 229910000402 monopotassium phosphate Inorganic materials 0.000 description 3
- 235000019796 monopotassium phosphate Nutrition 0.000 description 3
- 239000012452 mother liquor Substances 0.000 description 3
- PJNZPQUBCPKICU-UHFFFAOYSA-N phosphoric acid;potassium Chemical compound [K].OP(O)(O)=O PJNZPQUBCPKICU-UHFFFAOYSA-N 0.000 description 3
- 239000002243 precursor Substances 0.000 description 3
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- 239000006228 supernatant Substances 0.000 description 3
- 239000012137 tryptone Substances 0.000 description 3
- QKNYBSVHEMOAJP-UHFFFAOYSA-N 2-amino-2-(hydroxymethyl)propane-1,3-diol;hydron;chloride Chemical compound Cl.OCC(N)(CO)CO QKNYBSVHEMOAJP-UHFFFAOYSA-N 0.000 description 2
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 2
- 229910021580 Cobalt(II) chloride Inorganic materials 0.000 description 2
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 2
- 102000003960 Ligases Human genes 0.000 description 2
- 108090000364 Ligases Proteins 0.000 description 2
- 229910021380 Manganese Chloride Inorganic materials 0.000 description 2
- GLFNIEUTAYBVOC-UHFFFAOYSA-L Manganese chloride Chemical compound Cl[Mn]Cl GLFNIEUTAYBVOC-UHFFFAOYSA-L 0.000 description 2
- 229910018890 NaMoO4 Inorganic materials 0.000 description 2
- 229910021586 Nickel(II) chloride Inorganic materials 0.000 description 2
- 102000004316 Oxidoreductases Human genes 0.000 description 2
- 108090000854 Oxidoreductases Proteins 0.000 description 2
- 241000589776 Pseudomonas putida Species 0.000 description 2
- 102000004357 Transferases Human genes 0.000 description 2
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- 229940088710 antibiotic agent Drugs 0.000 description 2
- 239000001110 calcium chloride Substances 0.000 description 2
- 229910001628 calcium chloride Inorganic materials 0.000 description 2
- 229910052927 chalcanthite Inorganic materials 0.000 description 2
- 238000001816 cooling Methods 0.000 description 2
- 238000012258 culturing Methods 0.000 description 2
- 125000000151 cysteine group Chemical group N[C@@H](CS)C(=O)* 0.000 description 2
- HNDVDQJCIGZPNO-UHFFFAOYSA-N histidine Natural products OC(=O)C(N)CC1=CN=CN1 HNDVDQJCIGZPNO-UHFFFAOYSA-N 0.000 description 2
- 238000002347 injection Methods 0.000 description 2
- 239000007924 injection Substances 0.000 description 2
- 229910052943 magnesium sulfate Inorganic materials 0.000 description 2
- 235000019341 magnesium sulphate Nutrition 0.000 description 2
- 239000011565 manganese chloride Substances 0.000 description 2
- 230000004060 metabolic process Effects 0.000 description 2
- QMMRZOWCJAIUJA-UHFFFAOYSA-L nickel dichloride Chemical compound Cl[Ni]Cl QMMRZOWCJAIUJA-UHFFFAOYSA-L 0.000 description 2
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- 238000012163 sequencing technique Methods 0.000 description 2
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- 229910000368 zinc sulfate Inorganic materials 0.000 description 2
- NWONKYPBYAMBJT-UHFFFAOYSA-L zinc sulfate Chemical compound [Zn+2].[O-]S([O-])(=O)=O NWONKYPBYAMBJT-UHFFFAOYSA-L 0.000 description 2
- 239000011686 zinc sulphate Substances 0.000 description 2
- 101100536799 Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) tgnE gene Proteins 0.000 description 1
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- 101000623895 Bos taurus Mucin-15 Proteins 0.000 description 1
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- 241001670062 Halomonas utahensis Species 0.000 description 1
- 241000544058 Halophila Species 0.000 description 1
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 description 1
- 241000588747 Klebsiella pneumoniae Species 0.000 description 1
- CKLJMWTZIZZHCS-REOHCLBHSA-N L-aspartic acid Chemical compound OC(=O)[C@@H](N)CC(O)=O CKLJMWTZIZZHCS-REOHCLBHSA-N 0.000 description 1
- HNDVDQJCIGZPNO-YFKPBYRVSA-N L-histidine Chemical compound OC(=O)[C@@H](N)CC1=CN=CN1 HNDVDQJCIGZPNO-YFKPBYRVSA-N 0.000 description 1
- QIVBCDIJIAJPQS-VIFPVBQESA-N L-tryptophane Chemical compound C1=CC=C2C(C[C@H](N)C(O)=O)=CNC2=C1 QIVBCDIJIAJPQS-VIFPVBQESA-N 0.000 description 1
- MTCFGRXMJLQNBG-UHFFFAOYSA-N Serine Natural products OCC(N)C(O)=O MTCFGRXMJLQNBG-UHFFFAOYSA-N 0.000 description 1
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- QIVBCDIJIAJPQS-UHFFFAOYSA-N Tryptophan Natural products C1=CC=C2C(CC(N)C(O)=O)=CNC2=C1 QIVBCDIJIAJPQS-UHFFFAOYSA-N 0.000 description 1
- 239000002253 acid Substances 0.000 description 1
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- 150000001298 alcohols Chemical class 0.000 description 1
- 229960000723 ampicillin Drugs 0.000 description 1
- AVKUERGKIZMTKX-NJBDSQKTSA-N ampicillin Chemical compound C1([C@@H](N)C(=O)N[C@H]2[C@H]3SC([C@@H](N3C2=O)C(O)=O)(C)C)=CC=CC=C1 AVKUERGKIZMTKX-NJBDSQKTSA-N 0.000 description 1
- 239000008346 aqueous phase Substances 0.000 description 1
- 235000003704 aspartic acid Nutrition 0.000 description 1
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical compound [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 description 1
- OQFSQFPPLPISGP-UHFFFAOYSA-N beta-carboxyaspartic acid Natural products OC(=O)C(N)C(C(O)=O)C(O)=O OQFSQFPPLPISGP-UHFFFAOYSA-N 0.000 description 1
- 229920000704 biodegradable plastic Polymers 0.000 description 1
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- KGBXLFKZBHKPEV-UHFFFAOYSA-N boric acid Chemical compound OB(O)O KGBXLFKZBHKPEV-UHFFFAOYSA-N 0.000 description 1
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- JZCCFEFSEZPSOG-UHFFFAOYSA-L copper(II) sulfate pentahydrate Chemical compound O.O.O.O.O.[Cu+2].[O-]S([O-])(=O)=O JZCCFEFSEZPSOG-UHFFFAOYSA-L 0.000 description 1
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- 238000000227 grinding Methods 0.000 description 1
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- 239000001257 hydrogen Substances 0.000 description 1
- 229910052739 hydrogen Inorganic materials 0.000 description 1
- 239000007943 implant Substances 0.000 description 1
- 238000009776 industrial production Methods 0.000 description 1
- 239000002054 inoculum Substances 0.000 description 1
- 230000003834 intracellular effect Effects 0.000 description 1
- 150000002500 ions Chemical class 0.000 description 1
- 239000004313 iron ammonium citrate Substances 0.000 description 1
- 235000000011 iron ammonium citrate Nutrition 0.000 description 1
- 229960000318 kanamycin Drugs 0.000 description 1
- SBUJHOSQTJFQJX-NOAMYHISSA-N kanamycin Chemical compound O[C@@H]1[C@@H](O)[C@H](O)[C@@H](CN)O[C@@H]1O[C@H]1[C@H](O)[C@@H](O[C@@H]2[C@@H]([C@@H](N)[C@H](O)[C@@H](CO)O2)O)[C@H](N)C[C@@H]1N SBUJHOSQTJFQJX-NOAMYHISSA-N 0.000 description 1
- 229930027917 kanamycin Natural products 0.000 description 1
- 229930182823 kanamycin A Natural products 0.000 description 1
- 150000002576 ketones Chemical class 0.000 description 1
- 239000007791 liquid phase Substances 0.000 description 1
- CDUFCUKTJFSWPL-UHFFFAOYSA-L manganese(II) sulfate tetrahydrate Chemical compound O.O.O.O.[Mn+2].[O-]S([O-])(=O)=O CDUFCUKTJFSWPL-UHFFFAOYSA-L 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 238000011177 media preparation Methods 0.000 description 1
- 239000012528 membrane Substances 0.000 description 1
- 238000012269 metabolic engineering Methods 0.000 description 1
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 1
- 238000002156 mixing Methods 0.000 description 1
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- 229910052757 nitrogen Inorganic materials 0.000 description 1
- 231100000252 nontoxic Toxicity 0.000 description 1
- 230000003000 nontoxic effect Effects 0.000 description 1
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- 102200005981 rs104894561 Human genes 0.000 description 1
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- 239000011684 sodium molybdate Substances 0.000 description 1
- 235000015393 sodium molybdate Nutrition 0.000 description 1
- TVXXNOYZHKPKGW-UHFFFAOYSA-N sodium molybdate (anhydrous) Chemical compound [Na+].[Na+].[O-][Mo]([O-])(=O)=O TVXXNOYZHKPKGW-UHFFFAOYSA-N 0.000 description 1
- 239000007787 solid Substances 0.000 description 1
- 238000006467 substitution reaction Methods 0.000 description 1
- QAOWNCQODCNURD-UHFFFAOYSA-N sulfuric acid Substances OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 1
- 238000010257 thawing Methods 0.000 description 1
- 231100000331 toxic Toxicity 0.000 description 1
- 230000002588 toxic effect Effects 0.000 description 1
- 230000009466 transformation Effects 0.000 description 1
- AUALKMYBYGCYNY-UHFFFAOYSA-E triazanium;2-hydroxypropane-1,2,3-tricarboxylate;iron(3+) Chemical compound [NH4+].[NH4+].[NH4+].[Fe+3].[Fe+3].[Fe+3].[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O.[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O.[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O.[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O AUALKMYBYGCYNY-UHFFFAOYSA-E 0.000 description 1
- 238000010200 validation analysis Methods 0.000 description 1
- 238000005303 weighing Methods 0.000 description 1
- 239000012138 yeast extract Substances 0.000 description 1
- RZLVQBNCHSJZPX-UHFFFAOYSA-L zinc sulfate heptahydrate Chemical compound O.O.O.O.O.O.O.[Zn+2].[O-]S([O-])(=O)=O RZLVQBNCHSJZPX-UHFFFAOYSA-L 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/0004—Oxidoreductases (1.)
- C12N9/0008—Oxidoreductases (1.) acting on the aldehyde or oxo group of donors (1.2)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/74—Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/0004—Oxidoreductases (1.)
- C12N9/0006—Oxidoreductases (1.) acting on CH-OH groups as donors (1.1)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P7/00—Preparation of oxygen-containing organic compounds
- C12P7/62—Carboxylic acid esters
- C12P7/625—Polyesters of hydroxy carboxylic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y101/00—Oxidoreductases acting on the CH-OH group of donors (1.1)
- C12Y101/01—Oxidoreductases acting on the CH-OH group of donors (1.1) with NAD+ or NADP+ as acceptor (1.1.1)
- C12Y101/01001—Alcohol dehydrogenase (1.1.1.1)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y101/00—Oxidoreductases acting on the CH-OH group of donors (1.1)
- C12Y101/01—Oxidoreductases acting on the CH-OH group of donors (1.1) with NAD+ or NADP+ as acceptor (1.1.1)
- C12Y101/01202—1,3-Propanediol dehydrogenase (1.1.1.202)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y102/00—Oxidoreductases acting on the aldehyde or oxo group of donors (1.2)
- C12Y102/01—Oxidoreductases acting on the aldehyde or oxo group of donors (1.2) with NAD+ or NADP+ as acceptor (1.2.1)
- C12Y102/01003—Aldehyde dehydrogenase (NAD+) (1.2.1.3)
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Abstract
The invention provides a dehydrogenase system and application thereof in preparing P34HB, wherein the dehydrogenase system comprises aldehyde dehydrogenase and alcohol dehydrogenase; the aldehyde dehydrogenase is any one of aldD1, aldD, gabD4, aldH and ydcW; the alcohol dehydrogenase is any one of adhp and dhaT. The dehydrogenase system of the invention overcomes the integration problem of dehydrogenases from different sources, can play a synergistic effect, and is important for promoting the sustainability and efficiency of BDO biosynthesis. Through a dehydrogenase system, a high-efficiency metabolic pathway is constructed, so that engineering bacteria can utilize 1, 4-Butanediol (BDO) as a carbon source to produce P34HB, the synthetic efficiency of 4HB is improved through selection and optimization of the dehydrogenase, and the content of 4HB in the P34HB is further improved.
Description
Technical Field
The invention relates to the field of bioengineering, in particular to a dehydrogenase system and application thereof in preparation of P34 HB.
Background
Polyhydroxyalkanoates (PHAs) are a class of biodegradable plastics synthesized by microorganisms. Of these, 4-hydroxybutyric acid (4 HB) is an important component of PHA, and the introduction of 4HB can improve the physical properties of PHA, for example, increase the flexibility and ductility of the material, making PHA more elastic and more suitable for some specific applications, such as degradable implants in the medical field. The biosynthetic pathway for PHA production typically involves the use of renewable resources such as biomass, which, by increasing 4HB content, better enables sustainable PHA production, helping to reduce reliance on limited resources such as petroleum. Therefore, research on how to increase the 4HB content in PHA through metabolic engineering means has important application value.
PHA synthesis by metabolic pathways under the condition of glucose as a carbon source is a common production method. In order to increase the 4HB content in PHA, 1, 4-Butanediol (BDO) may be used as a precursor for 4HB, producing 4-hydroxybutyric acid during the synthesis of PHA. At present, BDO is used as a precursor for production, and in industrial application, the PHA production efficiency is low, the cost is high, and the 4HB content in the PHA is low, so that the requirement of customers on high-quality PHA cannot be met.
Alcohol dehydrogenases (Alcohol dehydrogenase, ADH) are a class of oxidases that catalyze the conversion of alcohols to aldehydes or ketones. It exists widely in organisms and participates in various physiological processes such as alcohol metabolism, alcohol degradation and the like. Aldehyde dehydrogenases (Aldehyde dehydrogenase, ALDH) are a class of oxidases that catalyze the conversion of aldehydes to acids. The enzymes are mainly involved in aldehyde metabolism in organisms and play an important role in regulating redox balance in cells and maintaining the homeostasis of intracellular aldehyde substances. Alcohol dehydrogenases and aldehyde dehydrogenases are involved in the regulatory network of metabolic pathways in organisms and thus have a wide range of applications in medicine and industry, in particular in enzyme engineering. However, because of the difference between the enzymes from different sources, the reaction conditions and the performance of the enzymes have different degrees of variation, a combination of dehydrogenases which can overcome the integration problem of the enzymes from different sources and is most suitable for biosynthesis is needed, and a more reliable technical route is provided for industrial production.
Disclosure of Invention
Aiming at the defects in the prior art, the invention provides a dehydrogenase system and application thereof in preparing poly-3-hydroxybutyrate-4-hydroxybutyrate (P34 HB).
The present invention provides a dehydrogenase system comprising an aldehyde dehydrogenase and an alcohol dehydrogenase;
The aldehyde dehydrogenase is any one of aldD1, aldD, gabD4, aldH and ydcW; the nucleotide sequence of aldD1 is shown as SEQ ID No.32, and the amino acid sequence is shown as SEQ ID No. 40; the nucleotide sequence of aldD is shown as SEQ ID No.33, and the amino acid sequence is shown as SEQ ID No. 41; the nucleotide sequence of the gabD4 is shown as SEQ ID No.34, and the amino acid sequence is shown as SEQ ID No. 42; the nucleotide sequence of aldH is shown as SEQ ID No.35, and the amino acid sequence is shown as SEQ ID No. 43; the nucleotide sequence of ydcW is shown as SEQ ID No.36, and the amino acid sequence is shown as SEQ ID No. 44;
The alcohol dehydrogenase is any one of adhp and dhaT; the nucleotide sequence of adhp is shown as SEQ ID No.37, and the amino acid sequence is shown as SEQ ID No. 45; the nucleotide sequence of dhaT is shown as SEQ ID No.38, and the amino acid sequence is shown as SEQ ID No. 46.
The present invention also provides a dehydrogenase system comprising an aldehyde dehydrogenase and an alcohol dehydrogenase;
the aldehyde dehydrogenase is a gabD4 mutant, and is different from gabD4 in that the 144 th amino acid of the gabD4 mutant is alanine and the 169 th amino acid of the gabD4 mutant is alanine; the alcohol dehydrogenase is adhp.
The present invention also provides a dehydrogenase system comprising an aldehyde dehydrogenase and an alcohol dehydrogenase;
the aldehyde dehydrogenase is a gabD4 mutant, and is different from gabD4 in that the 144 th amino acid of the gabD4 mutant is alanine and the 169 th amino acid of the gabD4 mutant is alanine;
the alcohol dehydrogenase is adhp mutant, and the difference between the alcohol dehydrogenase and adhp is any one of the following:
(i) The amino acid 201 of adhp mutant is alanine and the amino acid 263 is alanine;
(ii) The 261 st amino acid of adhp mutant is alanine and the 271 st amino acid is lysine;
(iii) The adhp mutant has alanine at amino acid 101 and lysine at amino acid 79.
The invention also provides a recombinant vector comprising a nucleotide sequence encoding the dehydrogenase system.
The invention also provides a recombinant genetically engineered bacterium, which contains the recombinant vector.
Furthermore, the recombinant genetically engineered bacterium is halomonas, preferably Halomonas lutescens MDF-9;
The Halomonas lutescens MDF-9 strain used in the present application was deposited at the microorganism strain collection in Guangdong province (GDMCC address: guangzhou City, highway 100, no. 59 building 5, ministry of microorganisms, guangdong province, post code 510070) on day 8 and 2 of 2021. Deposit number GDMCC NO:61850. the strain was designated Halomonas lutescens MDF-9 and the classification was designated as halomonas (Halomonas lutescens).
The invention also provides an application of the dehydrogenase system or the recombinant vector or the recombinant genetically engineered bacterium in preparing P34 HB.
The invention also provides a method for producing P34HB, comprising the following steps:
s1: amplifying OrfZ gene sequences in vitro, and inserting the sequences into a vector to obtain a first vector plasmid;
s2: inserting a nucleotide sequence encoding the dehydrogenase system into the first vector plasmid S1 to obtain a second vector plasmid;
s3: introducing the second vector plasmid of S2 into Salmonella;
S4: inoculating the seed solution of the halomonas in the S3 into a fermentation medium for fermentation culture; the OrfZ gene sequence is shown as SEQ ID No. 39.
Further, the fermentation culture temperature in the step S4 is 30-45 ℃.
Further, in the step S4, the pH of the fermentation culture is 6-12, and the time is 30-60 hours.
In conclusion, compared with the prior art, the invention achieves the following technical effects:
1. The dehydrogenase system of the invention overcomes the integration problem of dehydrogenases from different sources, can play a synergistic effect, and is important for promoting the sustainability and efficiency of BDO biosynthesis.
2. According to the invention, a high-efficiency metabolic pathway is constructed through a dehydrogenase system, so that engineering bacteria can utilize 1, 4-Butanediol (BDO) as a carbon source to produce P34HB, and the synthetic efficiency of 4HB is improved through the selection and optimization of the dehydrogenase, so that the content of 4HB in the P34HB is improved.
3. In the process of producing P34HB, the invention can utilize 1, 4-butanediol as a raw material carbon source, is environment-friendly, safe and nontoxic, and reduces the toxic effect of the raw material on microorganisms in the production process. The production cost of the 1, 4-butanediol is low, and the cost of the raw material for producing the P34HB is reduced.
Drawings
In order to more clearly illustrate the technical solutions of the embodiments of the present invention, the drawings that are needed in the embodiments will be briefly described below, it being understood that the following drawings only illustrate some embodiments of the present invention and therefore should not be considered as limiting the scope, and other related drawings may be obtained according to these drawings without inventive effort for a person skilled in the art.
FIG. 1 is a pathway diagram of the production of P34HB according to an embodiment of the invention;
FIG. 2 is a map of pSEVA 321-OrfZ-aldD-dhaT plasmid constructed in example 1 of the present invention;
FIG. 3 is a plasmid map of pSEVA321-OrfZ-aldD1-adhp constructed in example 1 of the present invention;
FIG. 4 is a map of pSEVA321-OrfZ-aldD2-dhaT plasmid constructed in example 1 of the present invention;
FIG. 5 is a plasmid map of pSEVA321-OrfZ-aldD2-adhp constructed in example 1 of the present invention;
FIG. 6 is a plasmid map of pSEVA321-OrfZ-gabD4-dhaT constructed in example 1 of the present invention;
FIG. 7 is a plasmid map of pSEVA321-OrfZ-gabD4-adhp constructed in example 1 of the present invention;
FIG. 8 is a map of pSEVA321-OrfZ-aldH-dhaT plasmid constructed in example 1 of the present invention;
FIG. 9 is a plasmid map of pSEVA321-OrfZ-aldH-adhp constructed in example 1 of the present invention;
FIG. 10 is a map of pSEVA321-OrfZ-ydcW-dhaT plasmid constructed in example 1 of the present invention;
FIG. 11 is a plasmid map of pSEVA321-OrfZ-ydcW-adhp constructed in example 1 of the present invention;
FIG. 12 is an electrophoresis chart of a fragment of interest according to example 1 of the present invention; wherein the No. 1 is a gabD4-adhp fragment; the fragment No. 2 is gabD 4-dhaT; the fragment 3 is aldH-adhp; the fragment No. 4 is aldH-dhaT; fragment number 5 ydcW-adhp; the ydcW-dhaT fragment No. 6; fragment number 7 aldD to adhp; aldD1-dhaT fragment number 8; fragment number 9 aldD, fragments 2-adhp; no. 10 is aldD fragment 2-dhaT.
Detailed Description
In order that those skilled in the art will better understand the present invention, a technical solution in the embodiments of the present invention will be clearly and completely described below with reference to the accompanying drawings in which it is apparent that the described embodiments are only some embodiments of the present invention, not all embodiments. All other embodiments, which can be made by those skilled in the art based on the embodiments of the invention without making any inventive effort, shall fall within the scope of the invention.
In Halomonas lutescens MDF-9 strains, 10 strains which are different in enzyme combination and have the capability of producing 4HB are successfully obtained by amplifying combinations of 5 aldehyde dehydrogenases from different sources and 2 alcohol dehydrogenases from different sources, and P34HB is synthesized by taking glucose and BDO as precursors, as shown in figure 1. The 5 different sources of aldehyde dehydrogenases were aldD from the halophila strain Halomonas bluephagenesis, aldD from pseudomonas putida Pseudomonas putida, gabD4 from copper greedy Cupriavidus necator, aldH from escherichia coli ESCHERICHIA COLI, and ydcW from klebsiella pneumoniae Klebsiella pneumoniae, respectively. The 2 different sources of alcohol dehydrogenases were dhaT from pseudomonas putida Pseudomonas putida and adhp from pseudomonas halophila strain Halomonas bluephagenesis, respectively.
Subsequently 10 strains of different enzymes were combined and the strains with the ability to produce 4HB were subjected to fermentation tests, screening the highest efficiency enzyme combination system.
The method for producing P34HB by utilizing Halomonas lutescens MDF-9 modified bacteria comprises the following steps:
(1) Plate seed culture: activating strains; (2) shake flask seed culture;
(3) Dissolved oxygen and pH electrode correction; (4) setting fermentation parameters;
(5) Inoculating; (6) fermentation process control; (7) PHA extraction from the cells.
Fermenter temperature: 36-38 ℃;
pH 8~9。
EXAMPLE 1 construction of P34HB Strain synthesized with glucose and BDO as carbon sources
Since Halomonas lutescens MDF-9 strain itself lacks genes encoding the enzymes aldehyde dehydrogenase, alcohol dehydrogenase of this pathway, this example introduced BDO (1, 4-butanediol) metabolic pathway in the strain, which involved 3 enzymes aldehyde dehydrogenase, alcohol dehydrogenase and CoA transferase. To further obtain BDO-highly transformed strains, the above two enzymes were screened and tested, and specific experimental procedures were as follows:
(1) Constructing a plasmid:
The overlapping extension PCR was used to amplify the ligation of CoA transferase OrfZ to pSEVA321 backbone, and ligation was performed by Gibson ligase to construct plasmid pSEVA321-OrfZ. The 5 aldehyde dehydrogenases aldD, aldD2, gabD4, aldH, ydcW and 2 alcohol dehydrogenases dhaT, adhp and pSEVA321-OrfZ backbones were amplified by PCR. The 5 aldehyde dehydrogenase genes, 2 alcohol dehydrogenases and pSEVA321-OrfZ frameworks respectively form new plasmids under the action of Gibson ligase, 10 plasmids are total, and the information of the plasmids respectively named pSEVA321-OrfZ-aldD1-dhaT、pSEVA321-OrfZ-aldD1-adhp、pSEVA321-OrfZ-aldD2-dhaT、pSEVA321-OrfZ-aldD2-adhp、pSEVA321-OrfZ-gabD4-dhaT、pSEVA321-OrfZ-gabD4-adhp、pSEVA321-OrfZ-aldH-dhaT、pSEVA321-OrfZ-aldH-adhp、pSEVA321-OrfZ-ydcW-dhaT、pSEVA321-OrfZ-ydcW-adhp, is shown in figures 2-11.
(A) The primer sequences (5 '-3') used in the above plasmid construction procedure were as follows:
Aldehyde dehydrogenase amplification primer linked to alcohol dehydrogenase adhp:
aldD1-F1: see SEQ ID No.1;
aldD1-R1: see SEQ ID No.2;
aldD2-F1: see SEQ ID No.3;
aldD2-R1: see SEQ ID No.4;
gabD4-F1: see SEQ ID No.5;
gabD4-R1: see SEQ ID No.6;
aldH-F1: see SEQ ID No.7;
aldH-R1: see SEQ ID No.8;
ydcW-F1: see SEQ ID No.9;
ydcW-R1: see SEQ ID No.10;
adhp-F: see SEQ ID No.11;
adhp-R: see SEQ ID No.12;
aldehyde dehydrogenase amplification primer linked to alcohol dehydrogenase dhaT:
aldD1-F1: see SEQ ID No.1;
aldD1-R2: see SEQ ID No.13;
aldD2-F1: see SEQ ID No.3;
aldD2-R2: see SEQ ID No.14;
gabD4-F1: see SEQ ID No.5;
gabD4-R2: see SEQ ID No.15;
aldH-F1: see SEQ ID No.7;
aldH-R2: see SEQ ID No.16;
ydcW-F1: see SEQ ID No.9;
ydcW-R2: see SEQ ID No.17;
dhaT-F: see SEQ ID No.18;
dhaT-R: see SEQ ID No.19;
Backbone and OrfZ amplification primers:
pSEVA321-F: see SEQ ID No.20;
pSEVA321-R: see SEQ ID No.21;
OrfZ-F: see SEQ ID No.22;
OrfZ-R: see SEQ ID No.23;
pSEVA321-OrfZ-F: see SEQ ID No.24;
pSEVA321-OrfZ-R: see SEQ ID No.25.
(B) The amplification system and amplification procedure are shown in tables 1 and 2:
TABLE 1 amplification System Table
TABLE 2 amplification program Table
After the PCR reaction is completed, agarose gel with corresponding concentration is prepared, electrophoresis is carried out to observe the size of DNA bands, the gel is placed under an ultraviolet lamp, the gel of the target DNA fragment is rapidly cut off, and the redundant gel is cut off as much as possible.
(C) Gibson Assembly method connection
The concentration of the recovered DNA was measured, and the addition ratio of the DNA was calculated based on the length and concentration of the desired fragment and pSEVA321 backbone, and ligation was performed using Gibson enzyme mixture, the Gibson Assembly ligation system and the procedure are shown in Table 3 and Table 4:
TABLE 3 Gibson Assembly connection System Table
Table 4 Gibson Assembly connection procedure
(2) S17-1 E.coli transformation
Step 1: taking out competent cells of the S17-1 escherichia coli prepared in advance from the temperature of minus 80 ℃, thawing on ice, and waiting for fungus blocks to be thawed after 5 min;
Step 2: mu.L of the ligation product was added to competent cells, and the reaction was mixed with gentle vessel wall (shaking-free). And (3) injection: the ligation product conversion volume should not exceed at most 1/10 of the competent cell volume used;
step 3: ice bath for 30 min, water bath heat shock at 42 ℃ of 2 min, immediately cooling 2 min on ice, injecting: shaking can reduce conversion efficiency;
Step 4: 400 mu L of LB culture medium (without antibiotics) is added into the centrifuge tube, and the mixture is placed into a shaking table at 37 ℃ for resuscitation of 200 rpm to 60 min;
Step 5:5000 Centrifuging at rpm for 5 min to collect bacteria, discarding 350 μl of supernatant, taking 100 μl of resuspended bacteria mass, gently blowing and coating onto LB medium containing corresponding antibiotics;
step 6: and inverting the culture medium into a 37 ℃ incubator for culturing for 12-16 hours.
(3) Monoclonal colony positive verification
Colonies were picked on corresponding resistant LB plates, colony PCR verified, and PCR products with correct band sizes were sent to Bio-company for sequencing.
(4) Selecting single bacterial colony with correct sequence for expansion culture, jointing the single bacterial colony with Halomonas lutescens MDF-9 in a 20LB plate after 12-16 hours, and picking a small amount of jointed thalli to be coated on a 60LB plate with corresponding resistance after 8-h; 36-48 h followed by a further monoclonal colony validation.
(5) PCR identification results
The monoclonal colony is selected for PCR verification, the result of the electrophoresis verification is shown in figure 12, the number 1 is gabD4-adhp fragment, and the band size is 2471 bp; the fragment No. 2 gabD4-dhaT has a band size of 2627 bp; the fragment 3 is aldH-adhp, and the band size is 2532 bp; the size of the band is 2688 bp for aldH-dhaT fragment 4; fragment number 5 ydcW-adhp, band size 2471 bp; ydcW-dhaT fragment number 6, band size 2627 bp; fragment number 7 aldD to adhp, band size 2564 bp; aldD1-dhaT fragment number 8, band size 2720 bp; fragment number 9 aldD-adhp, band size 2564 bp; the aldD-dhaT fragment 10, band size 2720 bp. The results of the verification were all expected to indicate successful introduction of the 10-group enzyme combination plasmid into Halomonas lutescens MDF-9 strains. The 10 strains were designated as MDF-9-aldD1-A、MDF-9-aldD1-D、MDF-9-aldD2-A、MDF-9-aldD2-D、MDF-9-gabD4-A、MDF-9-gabD4-D、MDF-9-aldH-A、MDF-9-aldH-D、MDF-9-ydcW-A、MDF-9-ydcW-D.
EXAMPLE 2 screening test for 10 recombinant bacteria
(1) Culture medium:
60LB plate medium: yeast extract 5 g/L, tryptone 10 g/L, sodium chloride 60g/L, agar powder 1.8 g/100 mL, ampicillin 50. Mu.g/mL, kanamycin 30 g/mL, pH 8.0.
Component I: 0.2 g/L magnesium sulfate, 1.0 g/L urea (50 times concentrated mother liquor: 10 g/L magnesium sulfate, 3 g/L urea);
component II: potassium dihydrogen phosphate 5.2 g/L, 50 times mother liquor 260 g/L, glucose solution 30 g/L: glucose mother liquor is 500 g/L;
Component III (10 mL/L): ferric ammonium citrate 5 g/L, anhydrous calcium chloride 1.5 g/L,12 mol/L hydrochloric acid 41.7 mL/L;
Component IV (1 mL/L): 100 mg/L of zinc sulfate heptahydrate, 30 mg/L of manganese sulfate tetrahydrate, 300 mg/L of boric acid, 10 mg/L of copper sulfate pentahydrate and 30 mg/L of sodium molybdate.
Fermentation medium (50 MM medium): 1, 4-butanediol 5 g/L, glucose 30g/L, sodium chloride 50 g/L, yeast powder 1.2 g/L, urea 0.2-3 g/L, anhydrous magnesium sulfate 0.2 g/L, and potassium dihydrogen phosphate 1.5~5.5 g/L,Fe(III)-NH4-Citrate 5 g/L,CaCl2·2H2O 2 g/L,HCl 12 mol/L,ZnSO4·7H2O 0.1 g/L,MnCl2·4H2O 0.03 g/L,H2BO3 0.3 g/L,CoCl2·6H2O 0.2 g/L,CuSO4·5H2O 0.01 g/L,NiCl2·6H2O 0.02 g/L,NaMoO4·2H2O 0.03 g/L.
(2) Seed liquid preparation
Fermentation was performed using 10 bacteria constructed in example 1.
① Activating strains:
the strains were collected in a laboratory at-80℃in a refrigerator, and inoculated onto a plate solid medium (yeast powder 5 g/L; tryptone 10 g/L; sodium chloride 60 g/L; pH 8.5) by streaking with a gun head, followed by culturing at 37℃for 24. 24 h.
② Primary seed culture:
Single colonies were picked up and inoculated into 12 mL shaking tubes (5 mL 60LB medium: yeast powder 5 g/L; tryptone 10 g/L; sodium chloride 60 g/L; pH 8.5), and the culture broth was placed in a shaking table 37 ℃, 220 rpm, and cultured for 12 h.
③ Secondary seed culture:
200. Mu.L of the primary bacterial liquid (1% of the inoculum size) was aspirated, inoculated into 150 mL Erlenmeyer flasks (20 mL 60LB medium) and placed in a shaker at 37℃and 220rpm for 12 h.
(3) Fermentation medium preparation
Fermentation medium (50 MM medium): 1, 4-butanediol 5 g/L, glucose 30g/L, sodium chloride 50 g/L, yeast powder 1.2 g/L, urea 0.2-3 g/L, anhydrous magnesium sulfate 0.2 g/L, and potassium dihydrogen phosphate 1.5~5.5 g/L,Fe(III)-NH4-Citrate 5 g/L,CaCl2·2H2O 2 g/L,HCl 12 mol/L,ZnSO4·7H2O 0.1 g/L,MnCl2·4H2O 0.03 g/L,H2BO3 0.3 g/L,CoCl2·6H2O 0.2 g/L,CuSO4·5H2O 0.01 g/L,NiCl2·6H2O 0.02 g/L,NaMoO4·2H2O 0.03 g/L.
(4) Fermentation culture
Seed solution was inoculated (2.5 mL) in 500 mL Erlenmeyer flask at 5% and incubated at shaker 37℃and 220 rpm for 48 h.
(5) Determination of cell dry weight and PHA content
Cell Dry Weight (CDW): placing 30-35 mL of fermented bacterial liquid into a 50 mL centrifuge tube, centrifuging for 6 minutes at room temperature, wherein the rotating speed is 8000 rpm, and pouring out the supernatant; adding proper deionized water to restore the original volume, re-suspending to ensure complete disappearance of the precipitate, centrifuging under the same condition, and pouring out the supernatant; placing the sealing membrane sealing centrifuge tube in a refrigerator at-80 ℃ for freezing 2 h; drying the centrifuge tube in a vacuum freeze dryer for 12-16 hours; the cells were weighed and dry weight (g/L) was calculated.
Measuring PHA content: weighing 0.05 g of dried bacterial cells of a sample obtained by fermentation after grinding, treating the standard 4-hydroxybutyric acid of 4HB with the same sample, placing the sample in an esterification pipe with good sealing property, adding 2mL chloroform, 1700 mu L methanol and 300 mu L concentrated sulfuric acid, reacting 1 h in an oil bath at 100 ℃, cooling at room temperature, adding 1mL of ddH 2 O, fully shaking and uniformly mixing, and standing for layering. After the aqueous and organic phases were completely separated, the chloroform layer (typically the lower layer) was filtered into a liquid phase bottle using a 0.22 μm organic filter, and GC was performed using a GC-7800 gas chromatograph, a capillary column (Rtx-5 type, length 30 m, inner diameter 0.25 mm and stationary phase 0.25 μm) and hydrogen Flame Ion Detection (FID). The carrier gas is high purity nitrogen. The temperature programming settings are shown in table 5:
TABLE 5 program temperature settings
The sample injection volume is 1 mu L, the PHA is quantitatively analyzed by adopting an external standard method, and the yield of the PHA is calculated according to the peak area.
(6) Fermentation results
The fermentation results are shown in Table 6:
TABLE 6 fermentation results of 10 recombinant bacteria
The results showed that the synthesis of 4HB was able to be promoted by introducing an aldehyde dehydrogenase and an alcohol dehydrogenase in the MDF-9 strain. From the above 10 combinations of test results, it was found that MDF-9-gabD4-A had the best effect, and the cell dry weight, PHA and 4HB content were all the highest, respectively 12.68 g/L, 85.35 wt%, 12.01 mol%.
EXAMPLE 3 mutant screening of dehydrogenase
(1) Aldehyde dehydrogenase active site mutant construction
The active site of the aldehyde dehydrogenase contains conserved cysteine residues that interact directly with the aldehyde of the substrate, and in order to determine which cysteine residues are involved in substrate binding, the 2 cysteine-encoding positions (144, 169) of the aldehyde dehydrogenase are changed to alanine by site-directed mutagenesis. Alanine substitution was used because the methyl functionality of alanine was not effective in nucleophilic attack of the carbon-based carbon of the aldehyde. Specific construction procedure for site-directed mutagenesis is described in example 1.
The primers were designed as follows:
C144A-F: see SEQ ID No.26;
C144A-R: see SEQ ID No.27;
C169A-F: see SEQ ID No.28;
C169A-R: see SEQ ID No.29;
pSEVA321-OrfZ-F: see SEQ ID No.24;
pSEVA321-OrfZ-R: see SEQ ID No.25.
(2) Screening for random mutations in alcohol dehydrogenase
For more efficient expression of the dehydrogenase system, adhp was subjected to chemical random mutagenesis, and the mutants were screened for more efficient combinations with the aldehyde dehydrogenase gabD4 (C144A, C169A), for specific construction procedures, see example 1.
(A) The amplification primers were as follows:
adhp-F1: see SEQ ID No.30;
adhp-R1: see SEQ ID No.31.
(B) The amplification system is shown in Table 7:
TABLE 7 amplification System
Wherein, tris-HCl mix main component: tris-HCl 10mM, KCl 50 mM, mgCl 2 2 mM.
(C) Mutants of 4 strains adhp were obtained after screening and sequencing, respectively, the 44 th site of adhp was mutated from threonine to histidine and alanine (T44H, T44A), the 201 st site was mutated from aspartic acid to alanine, the 263 rd site was mutated from serine to alanine (D201A, S263H), the 261 st site was mutated from tryptophan to alanine, the 271 st site was mutated to lysine (W261A, S271K), the 101 st site was mutated from histidine to alanine, and the 79 th site was mutated to lysine (H101A, S79K).
After that, fermentation tests were carried out, and the specific fermentation medium and components are the same as in example 2, and the fermentation results are shown in table 8:
TABLE 8 fermentation results of dehydrogenase mutants
The results showed that when glutamic acid at 144 and 169 sites of aldehyde dehydrogenase gabD4 was mutated to alanine, both the cell dry weight and PHA content of the strain were increased and the synthesis of 4HB was promoted. After binding to adhp of the four mutants, MDF-9-gabD4 (C144A, C169A) -adhp (D201A, S263H) was combined with the best effect, and the cell dry weight, PHA and 4HB content was increased to 13.09 g/L, 93.11% and 13.11%, respectively.
The foregoing description of the preferred embodiments of the invention is not intended to limit the invention to the precise form disclosed, and any such modifications, equivalents, and alternatives falling within the spirit and scope of the invention are intended to be included within the scope of the invention.
Claims (10)
1. A dehydrogenase system, wherein the dehydrogenase system comprises an aldehyde dehydrogenase and an alcohol dehydrogenase;
the aldehyde dehydrogenase is any one of aldD1, aldD, gabD4, aldH and ydcW;
the alcohol dehydrogenase is any one of adhp and dhaT.
2. A dehydrogenase system, wherein the dehydrogenase system comprises an aldehyde dehydrogenase and an alcohol dehydrogenase;
The aldehyde dehydrogenase is a gabD4 mutant, and is different from gabD4 in that the 144 th amino acid of the gabD4 mutant is alanine and the 169 th amino acid of the gabD4 mutant is alanine;
The alcohol dehydrogenase is adhp.
3. A dehydrogenase system, wherein the dehydrogenase system comprises an aldehyde dehydrogenase and an alcohol dehydrogenase;
the aldehyde dehydrogenase is a gabD4 mutant, and is different from gabD4 in that the 144 th amino acid of the gabD4 mutant is alanine and the 169 th amino acid of the gabD4 mutant is alanine;
the alcohol dehydrogenase is adhp mutant, and the difference between the alcohol dehydrogenase and adhp is any one of the following:
(i) The amino acid 201 of adhp mutant is alanine and the amino acid 263 is alanine;
(ii) The 261 st amino acid of adhp mutant is alanine and the 271 st amino acid is lysine;
(iii) The adhp mutant has alanine at amino acid 101 and lysine at amino acid 79.
4. A recombinant vector comprising a nucleotide sequence encoding the dehydrogenase system of any one of claims 1 to 3.
5. A recombinant genetically engineered bacterium comprising the recombinant vector of claim 4.
6. The recombinant genetically engineered bacterium of claim 5, wherein the recombinant genetically engineered bacterium is a halomonas.
7. The dehydrogenase system according to any one of claims 1 to 3 or the recombinant vector according to claim 4 or the recombinant genetically engineered bacterium according to any one of claims 5 to 6, for use in the preparation of P34 HB.
8. A method for producing P34HB, comprising the steps of:
s1: amplifying OrfZ gene sequences in vitro, and inserting the sequences into a vector to obtain a first vector plasmid;
s2: inserting a nucleotide sequence encoding the dehydrogenase system of any one of claims 1-3 into the first vector plasmid of S1 to obtain a second vector plasmid;
s3: introducing the second vector plasmid of S2 into Salmonella;
s4: inoculating the seed solution of the halomonas in the S3 into a fermentation medium for fermentation culture.
9. The method according to claim 8, wherein the fermentation culture temperature in step S4 is 30-45 ℃.
10. The method according to claim 8, wherein the fermentation culture in step S4 has a pH of 6 to 12 for 30 to 60 hours.
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