CN117625564A - Erythrose reductase mutant and application thereof - Google Patents
Erythrose reductase mutant and application thereof Download PDFInfo
- Publication number
- CN117625564A CN117625564A CN202311537001.5A CN202311537001A CN117625564A CN 117625564 A CN117625564 A CN 117625564A CN 202311537001 A CN202311537001 A CN 202311537001A CN 117625564 A CN117625564 A CN 117625564A
- Authority
- CN
- China
- Prior art keywords
- erythrose reductase
- mutated
- erythritol
- erythrose
- asparagine
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
- 102000016912 Aldehyde Reductase Human genes 0.000 title claims abstract description 132
- 108010053754 Aldehyde reductase Proteins 0.000 title claims abstract description 132
- UNXHWFMMPAWVPI-UHFFFAOYSA-N Erythritol Natural products OCC(O)C(O)CO UNXHWFMMPAWVPI-UHFFFAOYSA-N 0.000 claims abstract description 52
- 239000004386 Erythritol Substances 0.000 claims abstract description 50
- UNXHWFMMPAWVPI-ZXZARUISSA-N erythritol Chemical compound OC[C@H](O)[C@H](O)CO UNXHWFMMPAWVPI-ZXZARUISSA-N 0.000 claims abstract description 50
- 229940009714 erythritol Drugs 0.000 claims abstract description 50
- 235000019414 erythritol Nutrition 0.000 claims abstract description 50
- 108090000623 proteins and genes Proteins 0.000 claims abstract description 48
- 241000235015 Yarrowia lipolytica Species 0.000 claims abstract description 37
- DCXYFEDJOCDNAF-UHFFFAOYSA-N Asparagine Natural products OC(=O)C(N)CC(N)=O DCXYFEDJOCDNAF-UHFFFAOYSA-N 0.000 claims abstract description 22
- DCXYFEDJOCDNAF-REOHCLBHSA-N L-asparagine Chemical compound OC(=O)[C@@H](N)CC(N)=O DCXYFEDJOCDNAF-REOHCLBHSA-N 0.000 claims abstract description 22
- 229960001230 asparagine Drugs 0.000 claims abstract description 22
- 235000009582 asparagine Nutrition 0.000 claims abstract description 22
- 230000035772 mutation Effects 0.000 claims abstract description 17
- 239000004472 Lysine Substances 0.000 claims abstract description 15
- KDXKERNSBIXSRK-UHFFFAOYSA-N Lysine Natural products NCCCCC(N)C(O)=O KDXKERNSBIXSRK-UHFFFAOYSA-N 0.000 claims abstract description 15
- 125000003588 lysine group Chemical group [H]N([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])(N([H])[H])C(*)=O 0.000 claims abstract description 15
- DHMQDGOQFOQNFH-UHFFFAOYSA-N Glycine Natural products NCC(O)=O DHMQDGOQFOQNFH-UHFFFAOYSA-N 0.000 claims abstract description 9
- 239000004471 Glycine Substances 0.000 claims abstract description 8
- FFEARJCKVFRZRR-BYPYZUCNSA-N L-methionine Chemical compound CSCC[C@H](N)C(O)=O FFEARJCKVFRZRR-BYPYZUCNSA-N 0.000 claims abstract description 8
- KZSNJWFQEVHDMF-UHFFFAOYSA-N Valine Natural products CC(C)C(N)C(O)=O KZSNJWFQEVHDMF-UHFFFAOYSA-N 0.000 claims abstract description 8
- 229930182817 methionine Natural products 0.000 claims abstract description 8
- 239000004474 valine Substances 0.000 claims abstract description 8
- 125000002987 valine group Chemical group [H]N([H])C([H])(C(*)=O)C([H])(C([H])([H])[H])C([H])([H])[H] 0.000 claims abstract description 8
- 125000003630 glycyl group Chemical group [H]N([H])C([H])([H])C(*)=O 0.000 claims abstract description 7
- OUYCCCASQSFEME-QMMMGPOBSA-N L-tyrosine Chemical compound OC(=O)[C@@H](N)CC1=CC=C(O)C=C1 OUYCCCASQSFEME-QMMMGPOBSA-N 0.000 claims abstract description 6
- COLNVLDHVKWLRT-UHFFFAOYSA-N phenylalanine Natural products OC(=O)C(N)CC1=CC=CC=C1 COLNVLDHVKWLRT-UHFFFAOYSA-N 0.000 claims abstract description 6
- COLNVLDHVKWLRT-QMMMGPOBSA-N phenylalanine group Chemical group N[C@@H](CC1=CC=CC=C1)C(=O)O COLNVLDHVKWLRT-QMMMGPOBSA-N 0.000 claims abstract description 6
- OUYCCCASQSFEME-UHFFFAOYSA-N tyrosine Natural products OC(=O)C(N)CC1=CC=C(O)C=C1 OUYCCCASQSFEME-UHFFFAOYSA-N 0.000 claims abstract description 6
- 230000014509 gene expression Effects 0.000 claims description 21
- 238000000034 method Methods 0.000 claims description 21
- 241000894006 Bacteria Species 0.000 claims description 19
- 238000000855 fermentation Methods 0.000 claims description 13
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 claims description 12
- 230000004151 fermentation Effects 0.000 claims description 12
- 239000013598 vector Substances 0.000 claims description 10
- 230000000813 microbial effect Effects 0.000 claims description 5
- 238000010276 construction Methods 0.000 claims description 4
- 229910052799 carbon Inorganic materials 0.000 claims description 3
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 claims description 2
- 101100010303 Drosophila melanogaster PolG1 gene Proteins 0.000 claims description 2
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 claims description 2
- 101150078890 POLG gene Proteins 0.000 claims description 2
- 102000004190 Enzymes Human genes 0.000 abstract description 44
- 108090000790 Enzymes Proteins 0.000 abstract description 44
- 230000000694 effects Effects 0.000 abstract description 39
- 238000010353 genetic engineering Methods 0.000 abstract description 4
- 230000008901 benefit Effects 0.000 abstract description 3
- 238000009776 industrial production Methods 0.000 abstract description 2
- 102220145503 rs28365994 Human genes 0.000 description 40
- 238000006243 chemical reaction Methods 0.000 description 25
- 210000004027 cell Anatomy 0.000 description 22
- 150000001413 amino acids Chemical group 0.000 description 18
- 238000004519 manufacturing process Methods 0.000 description 16
- YTBSYETUWUMLBZ-UHFFFAOYSA-N D-Erythrose Natural products OCC(O)C(O)C=O YTBSYETUWUMLBZ-UHFFFAOYSA-N 0.000 description 15
- YTBSYETUWUMLBZ-IUYQGCFVSA-N D-erythrose Chemical compound OC[C@@H](O)[C@@H](O)C=O YTBSYETUWUMLBZ-IUYQGCFVSA-N 0.000 description 15
- 239000000243 solution Substances 0.000 description 15
- 241001198387 Escherichia coli BL21(DE3) Species 0.000 description 13
- 239000012634 fragment Substances 0.000 description 13
- 239000002609 medium Substances 0.000 description 13
- 239000007788 liquid Substances 0.000 description 12
- 239000000758 substrate Substances 0.000 description 12
- 108010050375 Glucose 1-Dehydrogenase Proteins 0.000 description 10
- ACFIXJIJDZMPPO-NNYOXOHSSA-N NADPH Chemical compound C1=CCC(C(=O)N)=CN1[C@H]1[C@H](O)[C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OC[C@@H]2[C@H]([C@@H](OP(O)(O)=O)[C@@H](O2)N2C3=NC=NC(N)=C3N=C2)O)O1 ACFIXJIJDZMPPO-NNYOXOHSSA-N 0.000 description 10
- 229930027945 nicotinamide-adenine dinucleotide Natural products 0.000 description 10
- 102000004169 proteins and genes Human genes 0.000 description 10
- 239000013604 expression vector Substances 0.000 description 9
- 235000018102 proteins Nutrition 0.000 description 9
- 238000012216 screening Methods 0.000 description 9
- 102000040430 polynucleotide Human genes 0.000 description 8
- 108091033319 polynucleotide Proteins 0.000 description 8
- 239000002157 polynucleotide Substances 0.000 description 8
- 239000007787 solid Substances 0.000 description 8
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 6
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 6
- 229940024606 amino acid Drugs 0.000 description 6
- 235000001014 amino acid Nutrition 0.000 description 6
- 230000003321 amplification Effects 0.000 description 6
- 230000009977 dual effect Effects 0.000 description 6
- 239000008103 glucose Substances 0.000 description 6
- 238000003199 nucleic acid amplification method Methods 0.000 description 6
- 239000013612 plasmid Substances 0.000 description 6
- 239000000843 powder Substances 0.000 description 6
- 239000000047 product Substances 0.000 description 6
- 241000588724 Escherichia coli Species 0.000 description 5
- 230000001580 bacterial effect Effects 0.000 description 5
- 230000003197 catalytic effect Effects 0.000 description 5
- 238000006555 catalytic reaction Methods 0.000 description 5
- 238000001502 gel electrophoresis Methods 0.000 description 5
- 238000003780 insertion Methods 0.000 description 5
- 230000037431 insertion Effects 0.000 description 5
- 238000006467 substitution reaction Methods 0.000 description 5
- 239000006228 supernatant Substances 0.000 description 5
- 239000000872 buffer Substances 0.000 description 4
- 230000008859 change Effects 0.000 description 4
- 238000003032 molecular docking Methods 0.000 description 4
- 239000002773 nucleotide Substances 0.000 description 4
- 125000003729 nucleotide group Chemical group 0.000 description 4
- 108090000765 processed proteins & peptides Proteins 0.000 description 4
- 230000035484 reaction time Effects 0.000 description 4
- 229920001817 Agar Polymers 0.000 description 3
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 3
- 240000004808 Saccharomyces cerevisiae Species 0.000 description 3
- 239000008272 agar Substances 0.000 description 3
- 239000003054 catalyst Substances 0.000 description 3
- 238000012217 deletion Methods 0.000 description 3
- 230000037430 deletion Effects 0.000 description 3
- 238000010586 diagram Methods 0.000 description 3
- 238000011081 inoculation Methods 0.000 description 3
- 229930027917 kanamycin Natural products 0.000 description 3
- SBUJHOSQTJFQJX-NOAMYHISSA-N kanamycin Chemical compound O[C@@H]1[C@@H](O)[C@H](O)[C@@H](CN)O[C@@H]1O[C@H]1[C@H](O)[C@@H](O[C@@H]2[C@@H]([C@@H](N)[C@H](O)[C@@H](CO)O2)O)[C@H](N)C[C@@H]1N SBUJHOSQTJFQJX-NOAMYHISSA-N 0.000 description 3
- 229960000318 kanamycin Drugs 0.000 description 3
- 229930182823 kanamycin A Natural products 0.000 description 3
- 239000007791 liquid phase Substances 0.000 description 3
- XIXADJRWDQXREU-UHFFFAOYSA-M lithium acetate Chemical compound [Li+].CC([O-])=O XIXADJRWDQXREU-UHFFFAOYSA-M 0.000 description 3
- 108020004707 nucleic acids Proteins 0.000 description 3
- 102000039446 nucleic acids Human genes 0.000 description 3
- 150000007523 nucleic acids Chemical class 0.000 description 3
- 230000008569 process Effects 0.000 description 3
- 239000011780 sodium chloride Substances 0.000 description 3
- 238000003786 synthesis reaction Methods 0.000 description 3
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 3
- 238000010356 CRISPR-Cas9 genome editing Methods 0.000 description 2
- 206010056474 Erythrosis Diseases 0.000 description 2
- ROHFNLRQFUQHCH-YFKPBYRVSA-N L-leucine Chemical compound CC(C)C[C@H](N)C(O)=O ROHFNLRQFUQHCH-YFKPBYRVSA-N 0.000 description 2
- ROHFNLRQFUQHCH-UHFFFAOYSA-N Leucine Natural products CC(C)CC(N)C(O)=O ROHFNLRQFUQHCH-UHFFFAOYSA-N 0.000 description 2
- 102000004316 Oxidoreductases Human genes 0.000 description 2
- 108090000854 Oxidoreductases Proteins 0.000 description 2
- 239000001888 Peptone Substances 0.000 description 2
- 108010080698 Peptones Proteins 0.000 description 2
- 229930006000 Sucrose Natural products 0.000 description 2
- CZMRCDWAGMRECN-UGDNZRGBSA-N Sucrose Chemical compound O[C@H]1[C@H](O)[C@@H](CO)O[C@@]1(CO)O[C@@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](CO)O1 CZMRCDWAGMRECN-UGDNZRGBSA-N 0.000 description 2
- 238000002835 absorbance Methods 0.000 description 2
- 230000002210 biocatalytic effect Effects 0.000 description 2
- 230000015572 biosynthetic process Effects 0.000 description 2
- 238000012258 culturing Methods 0.000 description 2
- 238000013461 design Methods 0.000 description 2
- 238000001514 detection method Methods 0.000 description 2
- 238000005516 engineering process Methods 0.000 description 2
- 235000013305 food Nutrition 0.000 description 2
- 230000002068 genetic effect Effects 0.000 description 2
- 238000010362 genome editing Methods 0.000 description 2
- 239000003550 marker Substances 0.000 description 2
- 230000002018 overexpression Effects 0.000 description 2
- 235000019319 peptone Nutrition 0.000 description 2
- 239000011541 reaction mixture Substances 0.000 description 2
- 239000000126 substance Substances 0.000 description 2
- 239000005720 sucrose Substances 0.000 description 2
- 238000012546 transfer Methods 0.000 description 2
- 230000001131 transforming effect Effects 0.000 description 2
- -1 At the same time Natural products 0.000 description 1
- 241000972773 Aulopiformes Species 0.000 description 1
- 241000196324 Embryophyta Species 0.000 description 1
- 241000233866 Fungi Species 0.000 description 1
- 239000012880 LB liquid culture medium Substances 0.000 description 1
- 229910009891 LiAc Inorganic materials 0.000 description 1
- QIVBCDIJIAJPQS-UHFFFAOYSA-N Tryptophan Natural products C1=CC=C2C(CC(N)C(O)=O)=CNC2=C1 QIVBCDIJIAJPQS-UHFFFAOYSA-N 0.000 description 1
- 101100215634 Yarrowia lipolytica (strain CLIB 122 / E 150) XPR2 gene Proteins 0.000 description 1
- 239000002253 acid Substances 0.000 description 1
- 150000001298 alcohols Chemical class 0.000 description 1
- 125000000539 amino acid group Chemical group 0.000 description 1
- 238000004458 analytical method Methods 0.000 description 1
- 210000004102 animal cell Anatomy 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- 230000004071 biological effect Effects 0.000 description 1
- 230000006696 biosynthetic metabolic pathway Effects 0.000 description 1
- 238000009835 boiling Methods 0.000 description 1
- 238000004113 cell culture Methods 0.000 description 1
- 239000003153 chemical reaction reagent Substances 0.000 description 1
- 238000004587 chromatography analysis Methods 0.000 description 1
- 230000004186 co-expression Effects 0.000 description 1
- 239000005515 coenzyme Substances 0.000 description 1
- 238000007796 conventional method Methods 0.000 description 1
- 238000002425 crystallisation Methods 0.000 description 1
- 230000008025 crystallization Effects 0.000 description 1
- 239000012531 culture fluid Substances 0.000 description 1
- 208000002925 dental caries Diseases 0.000 description 1
- 238000003028 enzyme activity measurement method Methods 0.000 description 1
- 238000001952 enzyme assay Methods 0.000 description 1
- 238000002474 experimental method Methods 0.000 description 1
- 239000000499 gel Substances 0.000 description 1
- 239000001963 growth medium Substances 0.000 description 1
- 238000004128 high performance liquid chromatography Methods 0.000 description 1
- 230000006872 improvement Effects 0.000 description 1
- 230000003834 intracellular effect Effects 0.000 description 1
- BPHPUYQFMNQIOC-NXRLNHOXSA-N isopropyl beta-D-thiogalactopyranoside Chemical compound CC(C)S[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O BPHPUYQFMNQIOC-NXRLNHOXSA-N 0.000 description 1
- 230000002503 metabolic effect Effects 0.000 description 1
- 244000005700 microbiome Species 0.000 description 1
- 239000011259 mixed solution Substances 0.000 description 1
- 239000000203 mixture Substances 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 235000013615 non-nutritive sweetener Nutrition 0.000 description 1
- 230000009965 odorless effect Effects 0.000 description 1
- 230000037361 pathway Effects 0.000 description 1
- 230000004108 pentose phosphate pathway Effects 0.000 description 1
- 238000002360 preparation method Methods 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 230000000284 resting effect Effects 0.000 description 1
- 235000019515 salmon Nutrition 0.000 description 1
- 230000035939 shock Effects 0.000 description 1
- 238000002415 sodium dodecyl sulfate polyacrylamide gel electrophoresis Methods 0.000 description 1
- 230000000392 somatic effect Effects 0.000 description 1
- 230000007480 spreading Effects 0.000 description 1
- 238000003892 spreading Methods 0.000 description 1
- 239000013589 supplement Substances 0.000 description 1
- 230000009466 transformation Effects 0.000 description 1
- 125000000430 tryptophan group Chemical class [H]N([H])C(C(=O)O*)C([H])([H])C1=C([H])N([H])C2=C([H])C([H])=C([H])C([H])=C12 0.000 description 1
- 230000007306 turnover Effects 0.000 description 1
- 238000011144 upstream manufacturing Methods 0.000 description 1
- 238000012795 verification Methods 0.000 description 1
- 239000013603 viral vector Substances 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/0004—Oxidoreductases (1.)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/80—Vectors or expression systems specially adapted for eukaryotic hosts for fungi
- C12N15/81—Vectors or expression systems specially adapted for eukaryotic hosts for fungi for yeasts
- C12N15/815—Vectors or expression systems specially adapted for eukaryotic hosts for fungi for yeasts for yeasts other than Saccharomyces
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P7/00—Preparation of oxygen-containing organic compounds
- C12P7/02—Preparation of oxygen-containing organic compounds containing a hydroxy group
- C12P7/04—Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic
- C12P7/18—Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic polyhydric
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12R—INDEXING SCHEME ASSOCIATED WITH SUBCLASSES C12C - C12Q, RELATING TO MICROORGANISMS
- C12R2001/00—Microorganisms ; Processes using microorganisms
- C12R2001/645—Fungi ; Processes using fungi
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Genetics & Genomics (AREA)
- Organic Chemistry (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Biomedical Technology (AREA)
- Mycology (AREA)
- Molecular Biology (AREA)
- General Chemical & Material Sciences (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Physics & Mathematics (AREA)
- Biophysics (AREA)
- Plant Pathology (AREA)
- Medicinal Chemistry (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
Abstract
Description
技术领域Technical field
本发明属于基因工程领域,具体涉及一种赤藓糖还原酶突变体及其应用。The invention belongs to the field of genetic engineering, and specifically relates to an erythrose reductase mutant and its application.
背景技术Background technique
赤藓糖醇(1,2,3,4-丁四醇),是一种白色、无味、不吸湿、无光学活性、热稳定性好且易溶于水的四碳醇,甜度为蔗糖的60%~70%,热量为0.2kcal/g,仅为蔗糖热量的5%,是一种低热量的甜味剂。因其口感清凉、不致龋齿、结晶好等优点,在食品工业领域有着较为广泛的应用。赤藓糖醇可以通过化学法和微生物发酵法合成,然而化学合成法存在生产效率低、成本高和操作危险等缺点;微生物发酵法生产过程温和且容易控制,成为现今赤藓糖醇生产的主要途径。解脂耶氏酵母Yarrowia lipolytica作为公认的食品安全微生物,因抗胁迫能力强、基因结构独特、可利用的底物非常广泛等优点,成为目前国内外产赤藓糖醇的主要利用菌株。Erythritol (1,2,3,4-butanetetraol) is a four-carbon alcohol that is white, odorless, non-hygroscopic, non-optically active, has good thermal stability and is easily soluble in water. Its sweetness is that of sucrose. 60% to 70% of sugar, with a caloric value of 0.2kcal/g, only 5% of the caloric content of sucrose. It is a low-calorie sweetener. Because of its cool taste, non-caries, good crystallization and other advantages, it has been widely used in the food industry. Erythritol can be synthesized through chemical methods and microbial fermentation methods. However, chemical synthesis methods have shortcomings such as low production efficiency, high costs, and dangerous operations. The production process of microbial fermentation methods is gentle and easy to control, and it has become the main method for erythritol production today. way. Yarrowia lipolytica, as a recognized food safety microorganism, has become the main strain used to produce erythritol at home and abroad due to its strong resistance to stress, unique genetic structure, and wide range of available substrates.
在解脂耶氏酵母中,赤藓糖醇通过戊糖磷酸途径(PPP)作为渗透保护剂产生得到。赤藓糖醇代谢合成途径的最后一步是经赤藓糖还原酶(ER)的催化,将D-赤藓糖还原为赤藓糖醇,同时赤藓糖还原酶在催化过程中以NADPH为辅因子。赤藓糖还原酶是赤藓糖醇生物合成途径最后一步中唯一的酶,被认为是整个反应的关键酶。In Yarrowia lipolytica, erythritol is produced as an osmoprotectant via the pentose phosphate pathway (PPP). The last step of the erythritol metabolic synthesis pathway is the reduction of D-erythrose to erythritol through the catalysis of erythrose reductase (ER). At the same time, erythrose reductase uses NADPH as a supplement during the catalytic process. factor. Erythrose reductase is the only enzyme in the last step of the erythritol biosynthetic pathway and is considered the key enzyme for the entire reaction.
作为生产赤藓糖醇的限速酶,赤藓糖还原酶的表达与活性对于赤藓糖醇的合成效率至关重要。但是目前针对此酶进行的蛋白质工程改造工作却很少,因此获得一种催化能力提升的赤藓糖还原酶突变体,对进一步提高赤藓糖醇的产量具有重要意义。As the rate-limiting enzyme for the production of erythritol, the expression and activity of erythritol reductase are crucial to the synthesis efficiency of erythritol. However, there is currently very little protein engineering work on this enzyme. Therefore, obtaining an erythrose reductase mutant with improved catalytic ability is of great significance to further increase the production of erythritol.
发明内容Contents of the invention
为解决现有技术中赤藓糖醇产量低的问题,本发明提供了一种解脂耶氏酵母来源的赤藓糖还原酶突变体及其编码基因,以及在微生物发酵生产赤藓糖醇中的应用。相较于解脂耶氏酵母来源的野生型赤藓糖还原酶,本发明提供的赤藓糖还原酶突变体酶活提高了26%~44%;且所提供的含有赤藓糖还原酶突变体编码基因的高产赤藓糖醇基因工程菌其赤藓糖醇产量较单过表达赤藓糖还原酶野生型的菌株有明显的提升。In order to solve the problem of low erythritol production in the prior art, the present invention provides an erythrose reductase mutant derived from Yarrowia lipolytica and its encoding gene, as well as in the production of erythritol by microbial fermentation. Applications. Compared with wild-type erythrose reductase derived from Yarrowia lipolytica, the enzyme activity of the erythrose reductase mutant provided by the invention is increased by 26% to 44%; and the erythrose reductase mutant provided by the invention contains an erythrose reductase mutation. The erythritol production of the high-yield erythritol genetically engineered strain encoding the somatic gene is significantly improved compared to the single-overexpressing wild-type strain of erythrose reductase.
本发明提供了一种赤藓糖还原酶突变体,与来源于解脂耶氏酵母Yarrowialipolytica的YALI0F18590g基因编码的赤藓糖还原酶相比,其进行了以下位点的单点突变或组合突变:The present invention provides an erythrose reductase mutant, which undergoes a single point mutation or a combination of mutations at the following sites compared with the erythrose reductase encoded by the YALIOF18590g gene derived from Yarrowia lipolytica:
(1)26号位点的赖氨酸突变成天冬酰胺;(1) Lysine at position 26 is mutated into asparagine;
(2)215号位点的甘氨酸突变成天冬酰胺;(2) Glycine at position 215 is mutated into asparagine;
(3)216号位点的苯丙氨酸突变成酪氨酸;(3) Phenylalanine at position 216 is mutated into tyrosine;
(4)295号位点的缬氨酸突变成蛋氨酸。(4) The valine at position 295 was mutated into methionine.
本发明将来源于解脂耶氏酵母的赤藓糖还原酶的氨基酸序列使用AlphaFold进行建模,并结合底物D-赤藓糖和NADPH模型,使用Autodock进行分子对接,选择了16个影响酶活的关键位点,进一步使用FoldX对这16个位点进行突变后稳定性分析。经分子对接结合热稳定性筛选后,选取了具有较好稳定性的突变位点进行赤藓糖还原酶突变体的构建。将构建得到的赤藓糖还原酶单突变体经载体转化至Escherichia coli BL21(DE3)中进行表达并收集粗酶液,通过检测各赤藓糖还原酶单突变体在催化D-赤藓糖生成赤藓糖醇的过程中NADPH的消耗量测定其反应酶活,由此粗筛确定了酶活正向提升的6个赤藓糖还原酶单突变体。对筛选得到的6个赤藓糖还原酶单突变体进行两两组合构建得到15个赤藓糖还原酶双突变体并对其进行反应酶活的测定,最终确定了酶活明显提升的突变体K26N、K26N/V295M、K26N/G215N、K26N/F216Y。将这四种赤藓糖还原酶突变体的编码基因进一步与葡萄糖脱氢酶GDH编码基因共同构建至双表达载体中并转化至Escherichia coli BL21(DE3)中构建得到基因工程菌,以该基因工程菌的湿菌体为催化剂进行以D-赤藓糖为底物,以葡萄糖为辅底物生成赤藓糖醇的生物催化反应,以此探究赤藓糖还原酶突变体对赤藓糖还原酶酶活表达的影响。结果显示,相较于野生型赤藓糖还原酶,上述的四种赤藓糖还原酶突变体酶活提高1.26~1.44倍,其中赤藓糖还原酶突变体K26N/V295M酶活提升44%,相对具有最高酶活。为进一步获得高产赤藓糖醇的基因工程菌,本发明应用CRISPR-Cas9基因编辑技术,以解脂耶氏酵母Yarrowia lipolytica Po1g(ATCC20460)为底盘菌株,将赤藓糖还原酶突变体K26N/V295M的完整基因表达框插入到底盘菌株的基因组上,并选用组合型启动子hp4d作为该表达框的启动子,实现赤藓糖还原酶突变体基因的过表达,进一步提升了赤藓糖醇的生物合成产量。In this invention, the amino acid sequence of erythrose reductase derived from Yarrowia lipolytica was modeled using AlphaFold, combined with the substrate D-erythrose and NADPH models, and Autodock was used for molecular docking, and 16 influencing enzymes were selected. For the active key sites, FoldX was further used to conduct post-mutation stability analysis on these 16 sites. After molecular docking combined with thermal stability screening, mutation sites with better stability were selected to construct erythrose reductase mutants. The constructed single mutants of erythrose reductase were transformed into Escherichia coli BL21 (DE3) through vectors for expression and the crude enzyme solution was collected. The performance of each single mutant of erythrose reductase in catalyzing the production of D-erythrose was detected. The consumption of NADPH during the process of erythritol was used to measure the reaction enzyme activity. From this, 6 erythrose reductase single mutants with positive increase in enzyme activity were identified through rough screening. The 6 erythrose reductase single mutants obtained through screening were combined in pairs to construct 15 erythrose reductase double mutants, and their reaction enzyme activities were measured, and finally the mutants with significantly improved enzyme activity were determined. K26N, K26N/V295M, K26N/G215N, K26N/F216Y. The coding genes of these four erythrose reductase mutants were further co-constructed with the glucose dehydrogenase GDH coding gene into a dual expression vector and transformed into Escherichia coli BL21 (DE3) to construct a genetically engineered strain. The wet cells of the bacteria were used as catalysts to carry out biocatalytic reactions using D-erythrose as the substrate and glucose as the co-substrate to produce erythritol, in order to explore the effects of erythrose reductase mutants on erythrose reductase. Effects on enzyme activity expression. The results showed that compared with wild-type erythrose reductase, the enzyme activity of the above four erythrose reductase mutants increased by 1.26 to 1.44 times, among which the enzyme activity of the erythrose reductase mutant K26N/V295M increased by 44%. Relatively has the highest enzyme activity. In order to further obtain genetically engineered bacteria with high erythritol production, the present invention applied CRISPR-Cas9 gene editing technology, using Yarrowia lipolytica Po1g (ATCC20460) as the chassis strain, and transformed the erythrose reductase mutant K26N/V295M The complete gene expression cassette was inserted into the genome of the chassis strain, and the combined promoter hp4d was selected as the promoter of the expression cassette to achieve overexpression of the erythrose reductase mutant gene, further improving the biological properties of erythritol. Synthetic Yield.
作为优选,所述赤藓糖还原酶突变体与来源于解脂耶氏酵母Yarrowialipolytica的YALI0F18590g基因编码的赤藓糖还原酶相比,其进行了下列之一的组合突变:Preferably, the erythrose reductase mutant has undergone one of the following combined mutations compared with the erythrose reductase encoded by the YALIOF18590g gene derived from Yarrowia lipolytica:
(1)26号位点的赖氨酸突变成天冬酰胺且215号位点的甘氨酸突变成天冬酰胺;(1) The lysine at position 26 is mutated into asparagine and the glycine at position 215 is mutated into asparagine;
(2)26号位点的赖氨酸突变成天冬酰胺且216号位点的苯丙氨酸突变成酪氨酸;(2) The lysine at position 26 is mutated into asparagine and the phenylalanine at position 216 is mutated into tyrosine;
(3)26号位点的赖氨酸突变成天冬酰胺且295号位点的缬氨酸突变成蛋氨酸。(3) The lysine at position 26 was mutated into asparagine and the valine at position 295 was mutated into methionine.
作为进一步优选,所述赤藓糖还原酶突变体与来源于解脂耶氏酵母Yarrowialipolytica的YALI0F18590g基因编码的赤藓糖还原酶相比,其进行了以下的组合突变:26号位点的赖氨酸突变成天冬酰胺且295号位点的缬氨酸突变成蛋氨酸。As a further preference, the erythrose reductase mutant has undergone the following combined mutations compared with the erythrose reductase encoded by the YALIOF18590g gene derived from Yarrowia lipolytica: lysine at position 26 The acid was mutated to asparagine and the valine at position 295 was mutated to methionine.
具体地,本发明对由氨基酸序列如SEQ ID NO.1所示的赤藓糖还原酶第26位赖氨酸突变为天冬酰胺,获得氨基酸序列如SEQ ID NO.2所示的赤藓糖还原酶突变体;或者,对由氨基酸序列如SEQ ID NO.1所示的赤藓糖还原酶第26位赖氨酸突变为天冬酰胺,同时第215位甘氨酸突变为天冬酰胺,获得氨基酸序列如SEQ ID NO.3所示的赤藓糖还原酶突变体;或者,对由氨基酸序列如SEQ ID NO.1所示的赤藓糖还原酶第26位赖氨酸突变为天冬酰胺,同时第216位苯丙氨酸突变为酪氨酸,获得氨基酸序列如SEQ ID NO.4所示的赤藓糖还原酶突变体;或者,对由氨基酸序列如SEQ ID NO.1所示的赤藓糖还原酶第26位赖氨酸突变为天冬酰胺,同时第295位缬氨酸突变为蛋氨酸,获得氨基酸序列如SEQ ID NO.5所示的赤藓糖还原酶突变体。Specifically, the present invention mutates lysine at position 26 of erythrose reductase as shown in SEQ ID NO.1 to asparagine to obtain erythrose with an amino acid sequence as shown in SEQ ID NO.2 Reductase mutant; alternatively, mutate lysine at position 26 to asparagine and glycine at position 215 to asparagine of erythrose reductase whose amino acid sequence is as shown in SEQ ID NO.1 to obtain amino acids An erythrose reductase mutant with a sequence as shown in SEQ ID NO.3; or a mutation of lysine at position 26 of an erythrose reductase with an amino acid sequence as shown in SEQ ID NO.1 to asparagine, At the same time, phenylalanine at position 216 was mutated to tyrosine to obtain an erythrose reductase mutant with an amino acid sequence as shown in SEQ ID NO.4; or, an erythrose reductase mutant with an amino acid sequence as shown in SEQ ID NO.1 was obtained. Lysine at position 26 of erythrose reductase was mutated to asparagine, and valine at position 295 was mutated to methionine, thereby obtaining an erythrose reductase mutant with the amino acid sequence shown in SEQ ID NO.5.
由于氨基酸序列的特殊性,任何含有本发明所示氨基酸序列的肽蛋白的片段或其变体,如其保守性变体、生物活性片段或衍生物,只要该肽蛋白的片段或肽蛋白变体与前述氨基酸序列同源性在90%以上,均属于本发明保护范围之列。具体的,所述改变包括氨基酸序列中氨基酸的缺失、插入或替换;其中,对于变体的保守性改变,所替换的氨基酸具有与原氨基酸相似的结构或化学性质,如用亮氨酸替换异亮氨酸,变体也可具有非保守性改变,如用色氨酸替换甘氨酸。Due to the particularity of the amino acid sequence, any fragment of the peptide protein or its variant containing the amino acid sequence shown in the present invention, such as its conservative variant, biologically active fragment or derivative, as long as the fragment of the peptide protein or the variant of the peptide protein is consistent with The above-mentioned amino acid sequence homology is more than 90%, and all fall within the protection scope of the present invention. Specifically, the changes include the deletion, insertion or substitution of amino acids in the amino acid sequence; wherein, for conservative changes in variants, the replaced amino acids have similar structures or chemical properties to the original amino acids, such as replacing different amino acids with leucine. Leucine, variants can also have non-conservative changes, such as the substitution of tryptophan for glycine.
本发明还提供了编码上述赤藓糖还原酶突变体的基因,所述赤藓糖还原酶突变体的编码基因的核苷酸序列优选如SEQ ID NO.6、SEQ ID NO.7、SEQ ID NO.8、SEQ ID NO.9所示。由于核苷酸序列的特殊性,任何本发明所示多核苷酸的变体,只要其与前述多核苷酸具有90%以上同源性,均属于本发明保护范围之列。所述多核苷酸的变体是指一种具有一个或多个核苷酸改变的多核苷酸序列。此多核苷酸的变体可以是生的变位变异体或非生的变异体,包括取代变异体、缺失变异体和插入变异体。如本领域所知的,等位变异体是一个多核苷酸的替换形式,它可能是一个多核苷酸的取代、缺失或插入,但不会从实质上改变其编码的肽蛋白的功能。The present invention also provides a gene encoding the above-mentioned erythrose reductase mutant. The nucleotide sequence of the encoding gene of the erythrose reductase mutant is preferably as SEQ ID NO.6, SEQ ID NO.7, SEQ ID NO.8 and SEQ ID NO.9 are shown. Due to the particularity of the nucleotide sequence, any variant of the polynucleotide shown in the present invention, as long as it has more than 90% homology with the aforementioned polynucleotide, falls within the protection scope of the present invention. The polynucleotide variant refers to a polynucleotide sequence that has one or more nucleotide changes. Variants of this polynucleotide may be biological substitution variants or non-genetic variants, including substitution variants, deletion variants and insertion variants. As known in the art, an allelic variant is an alternative form of a polynucleotide, which may be a substitution, deletion or insertion of a polynucleotide, but does not substantially change the function of the peptide protein it encodes.
本发明还提供了含有所述的赤藓糖还原酶突变体编码基因的重组载体。所述重组载体包含与适合指导在宿主细胞中表达的控制序列可操作地连接的多核苷酸。本领域常规的各种载体,如各种质粒、噬菌体或病毒载体等,连接本发明的赤藓糖还原酶突变体核苷酸序列,均应属于本发明的保护范围。所述重组载体优选以质粒pET-28a(+)为表达载体,并将所述的赤藓糖还原酶突变体的编码基因克隆至所述的质粒pET-28a(+)。此外,当赤藓糖还原酶突变体编码基因进一步与葡萄糖脱氢酶GDH编码基因共同构建至双表达载体中时,一般可以选择以pCDF-Duet(+)为双表达载体。The present invention also provides a recombinant vector containing the gene encoding the erythrose reductase mutant. The recombinant vector comprises a polynucleotide operably linked to control sequences suitable for directing expression in a host cell. Various conventional vectors in this field, such as various plasmids, phages or viral vectors, etc., connected to the erythrose reductase mutant nucleotide sequence of the present invention, should all fall within the protection scope of the present invention. The recombinant vector preferably uses plasmid pET-28a(+) as an expression vector, and the coding gene of the erythrose reductase mutant is cloned into the plasmid pET-28a(+). In addition, when the gene encoding the erythrose reductase mutant is further co-constructed with the gene encoding glucose dehydrogenase GDH into a dual expression vector, pCDF-Duet(+) can generally be selected as the dual expression vector.
本发明还提供了含有所述的赤藓糖还原酶突变体编码基因的基因工程菌。将外源赤藓糖还原酶突变体编码基因通过基因工程技术导入到宿主细胞构建得到基因工程菌并进行表达,以获得本发明所述的赤藓糖还原酶突变体;其中,所述的宿主细胞可以是细菌、真菌、植物细胞或动物细胞,优选大肠杆菌Escherichia coli BL21(DE3)、解脂耶氏酵母Yarrowia lipolytica作为表达宿主。The invention also provides genetically engineered bacteria containing the gene encoding the erythrose reductase mutant. The exogenous erythrose reductase mutant encoding gene is introduced into the host cell through genetic engineering technology to construct the genetically engineered bacteria and expressed to obtain the erythrose reductase mutant of the present invention; wherein, the host The cells can be bacteria, fungi, plant cells or animal cells, and Escherichia coli BL21 (DE3) and Yarrowia lipolytica are preferred as expression hosts.
本发明还提供了一种高产赤藓糖醇基因工程菌的构建方法,所述方法包括:以解脂耶氏酵母Yarrowia lipolytica Po1g菌株作为底盘菌株,将所述的赤藓糖还原酶突变体的基因表达框定点插入Yarrowia lipolytica Po1g基因组上并进行过表达,构建得到高产赤藓糖醇基因工程菌。作为优选,选用组合型启动子hp4d作为所述基因表达框的启动子,以增强赤藓糖还原酶的表达。The invention also provides a method for constructing a genetically engineered strain with high yield of erythritol. The method includes: using Yarrowia lipolytica Polg strain as the chassis strain, and converting the erythrose reductase mutant into The gene expression frame was inserted into the genome of Yarrowia lipolytica Po1g and overexpressed to construct a genetically engineered strain with high yield of erythritol. Preferably, the combinatorial promoter hp4d is selected as the promoter of the gene expression box to enhance the expression of erythrose reductase.
本发明还提供了所述的赤藓糖还原酶突变体及其编码基因、重组载体、基因工程菌,或上述方法构建得到的高产赤藓糖醇基因工程菌在微生物发酵生产赤藓糖醇中的应用。The invention also provides the erythrose reductase mutant and its encoding gene, recombinant vector, genetically engineered bacteria, or the high-yield erythritol genetically engineered bacteria constructed by the above method in the production of erythritol through microbial fermentation. Applications.
作为优选,所述应用包括:将赤藓糖还原酶突变体编码基因与葡萄糖脱氢酶GDH编码基因共同构建至双表达载体pCDF-Duet(+)中并转化至Escherichia coli BL21(DE3)中构建得到基因工程菌,并以基因工程菌的湿菌体或湿菌体经破碎后制得的粗酶液为催化剂进行以D-赤藓糖为底物,以葡萄糖为辅底物生成赤藓糖醇的生物催化反应。Preferably, the application includes: co-constructing the erythrose reductase mutant encoding gene and the glucose dehydrogenase GDH encoding gene into the dual expression vector pCDF-Duet (+) and transforming it into Escherichia coli BL21 (DE3) for construction Genetically engineered bacteria are obtained, and the wet cells of the genetically engineered bacteria or the crude enzyme liquid obtained after crushing the wet cells are used as catalysts to generate erythrose with D-erythrose as the substrate and glucose as the auxiliary substrate. Biocatalytic reactions of alcohols.
作为优选,所述应用包括:将所述高产赤藓糖醇基因工程菌接种至发酵培养基中,以甘油作为碳源,进行摇瓶发酵生产赤藓糖醇。Preferably, the application includes: inoculating the high-yield erythritol genetically engineered bacteria into a fermentation medium, using glycerol as a carbon source, and performing shake flask fermentation to produce erythritol.
本发明的有益效果:本发明通过分子对接结合热稳定性筛选进行选点并进行定点定向突变改变蛋白质氨基酸残基,将酶活性催化中心附近氨基酸进行突变,得到了活性提高的赤藓糖还原酶突变体;与解脂耶氏酵母来源的野生型赤藓糖还原酶相比,突变体酶活提高了26%~44%。将赤藓糖还原酶突变体基因定点插入底盘菌株解脂耶氏酵母Yarrowialipolytica Po1g基因组上后,得到的高产赤藓糖醇基因工程菌的赤藓糖醇产量较单过表达赤藓糖还原酶野生型的菌株有明显的提升,对赤藓糖醇的工业生产具有重要意义。Beneficial effects of the present invention: The present invention selects sites through molecular docking combined with thermal stability screening and performs site-directed mutations to change protein amino acid residues, mutates amino acids near the enzyme active catalytic center, and obtains erythrose reductase with improved activity. Mutant; compared with wild-type erythrose reductase derived from Yarrowia lipolytica, the enzyme activity of the mutant increased by 26% to 44%. After the erythrose reductase mutant gene was inserted into the genome of the chassis strain Yarrowia lipolytica Po1g, the erythritol production of the high-producing erythritol genetically engineered strain was higher than that of the wild type overexpressing erythrose reductase alone. The strain has been significantly improved, which is of great significance to the industrial production of erythritol.
附图说明Description of drawings
图1为构建得到的赤藓糖还原酶与葡萄糖脱氢酶双表达载体核酸凝胶电泳图;泳道:1:250kb marker;2:ER片段的扩增产物;3:ER K26N片段的扩增产物;4:ER K26N/G215N片段的扩增产物;5:ER K26N/F216Y片段的扩增产物;6:ERK26N/V295M片段的扩增产物;7:pCDF-Dute-GDH表达框架的扩增产物。Figure 1 is a nucleic acid gel electrophoresis diagram of the constructed dual expression vector of erythrose reductase and glucose dehydrogenase; lanes: 1: 250kb marker; 2: amplification product of ER fragment; 3: amplification product of ER K26N fragment ; 4: Amplification product of ER K26N/G215N fragment; 5: Amplification product of ER K26N/F216Y fragment; 6: Amplification product of ERK26N/V295M fragment; 7: Amplification product of pCDF-Dute-GDH expression framework.
图2为突变菌株赤藓糖还原酶和葡萄糖脱氢酶双表达蛋白凝胶电泳图;泳道:1:marker;2:原始菌株E.coli BL21-pCDF-Dute-ER-GDH;3:E.coli BL21-pCDF-Dute-ERK26N-GDH;4:E.coli BL21-pCDF-Dute-ER K26N/G215N-GDH;5:E.coli BL21-pCDF-Dute-ERK26N/F216Y-GDH;6:E.coli BL21-pCDF-Dute-ER K26N/V295M-GDH。Figure 2 is a gel electrophoresis diagram of the mutant strain erythrose reductase and glucose dehydrogenase dual-expression protein gel electrophoresis; lanes: 1: marker; 2: original strain E.coli BL21-pCDF-Dute-ER-GDH; 3: E. coli BL21-pCDF-Dute-ERK26N-GDH; 4: E.coli BL21-pCDF-Dute-ER K26N/G215N-GDH; 5: E.coli BL21-pCDF-Dute-ERK26N/F216Y-GDH; 6: E. coli BL21-pCDF-Dute-ER K26N/V295M-GDH.
图3为赤藓糖还原酶催化底物反应时间进程。Figure 3 shows the time course of the substrate reaction catalyzed by erythrose reductase.
图4为赤藓糖还原酶野生型以及突变体K26N、K26N/V295M、K26N/G215N、K26N/F216Y的相对酶活。Figure 4 shows the relative enzyme activities of erythrose reductase wild type and mutants K26N, K26N/V295M, K26N/G215N, and K26N/F216Y.
图5为赤藓糖还原酶野生型编码基因以及突变体K26N/V295M编码基因在解脂耶氏酵母Yarrowia lipolytica Po1g底盘菌株中过表达后摇瓶发酵144h赤藓糖醇产量及OD600。Figure 5 shows the erythritol production and OD 600 of the wild-type encoding gene of erythrose reductase and the mutant K26N/V295M encoding gene after overexpression in Yarrowia lipolytica Po1g chassis strain after shake flask fermentation for 144 hours.
具体实施方式Detailed ways
以下通过特定的具体实施例说明本发明的实施方式,本领域技术人员可由本说明书所揭露的内容轻易地了解本发明的其他优点与功效。本发明还可以通过另外不同的具体实施方式加以实施或应用,本说明书中的各项细节也可以基于不同观点与应用,在没有背离本发明的精神下进行各种修饰或改变。需说明的是,在不冲突的情况下,以下实施例及实施例中的特征可以相互组合。本发明实施例中如无特殊说明所用方法均为常规方法,所用试剂均可从商业途径获得。The following describes the implementation of the present invention through specific specific examples. Those skilled in the art can easily understand other advantages and effects of the present invention from the content disclosed in this specification. The present invention can also be implemented or applied through other different specific embodiments. Various details in this specification can also be modified or changed in various ways based on different viewpoints and applications without departing from the spirit of the present invention. It should be noted that, as long as there is no conflict, the following embodiments and the features in the embodiments can be combined with each other. Unless otherwise specified, the methods used in the examples of the present invention are conventional methods, and all reagents used can be obtained from commercial sources.
【培养基、溶液的配置方法】[How to prepare culture media and solutions]
LB液体培养基:蛋白胨10g/L,酵母粉5g/L,NaCl 5g/L,121℃灭菌20min。LB liquid culture medium: peptone 10g/L, yeast powder 5g/L, NaCl 5g/L, sterilized at 121°C for 20 minutes.
LB固体培养基:LB液体培养基基础上添加15g/L琼脂粉,121℃,灭菌20min。LB solid medium: Add 15g/L agar powder to LB liquid medium, sterilize at 121°C for 20 minutes.
50mM PBS缓冲液:NaCl 4g/L,KCl 0.1g/L,Na2HPO40.72 g/L,KH2PO40.12 g/L,浓HCl调pH至6.0。50mM PBS buffer: NaCl 4g/L, KCl 0.1g/L, Na 2 HPO 4 0.72 g/L, KH 2 PO 4 0.12 g/L, and concentrated HCl to adjust pH to 6.0.
YPD液体培养基:葡萄糖20g/L,酵母粉10g/L,蛋白胨20g/L,115℃,灭菌20min。YPD liquid medium: glucose 20g/L, yeast powder 10g/L, peptone 20g/L, 115°C, sterilized for 20 minutes.
YPD固体培养基:YPD液体培养基基础上添加20g/L琼脂粉,115℃,灭菌20min。YPD solid medium: Add 20g/L agar powder to YPD liquid medium, sterilize at 115°C for 20 minutes.
SD固体培养基:葡萄糖20g/L,YNB 6.7g/L,琼脂粉20g/L,115℃,灭菌20min。SD solid medium: glucose 20g/L, YNB 6.7g/L, agar powder 20g/L, 115°C, sterilized for 20 minutes.
ESM发酵培养基:甘油100g/L,(NH4)2SO42.3 g/L,KH2PO40.22 g/L,MgSO4·7H2O1g/L,酵母粉1g/L,NaCl 25g/L,浓H2SO4调pH至3.0,121℃,灭菌20min,接种前加入灭过菌的CaCO33 g/L。ESM fermentation medium: glycerol 100g/L, (NH 4 ) 2 SO 4 2.3 g/L, KH 2 PO 4 0.22 g/L, MgSO 4 ·7H 2 O1g/L, yeast powder 1g/L, NaCl 25g/L , adjust the pH to 3.0 with concentrated H 2 SO 4 , sterilize at 121°C for 20 minutes, and add sterilized CaCO 3 3 g/L before inoculation.
实施例1:赤藓糖还原酶突变体筛选Example 1: Screening of erythrose reductase mutants
(1)赤藓糖还原酶突变体的获得(1) Obtaining erythrose reductase mutants
将来源于解脂耶氏酵母Yarrowia lipolytica的赤藓糖还原酶的氨基酸序列使用AlphaFold进行建模,PubChem网站下载两底物D-赤藓糖和NADPH模型,使用Autodock进行分子对接,选择了16个影响酶活的关键位点,进一步使用Fold X对这16个位点进行突变后稳定性分析,选取稳定性最好的突变进行赤藓糖还原酶突变体的构建。以构建好的载体pET-28a-ER为模板,设计合理的引物PCR引入突变位点,构建各赤藓糖还原酶突变体表达载体;其中,引物见表1。The amino acid sequence of erythrose reductase derived from Yarrowia lipolytica was modeled using AlphaFold. The two-substrate D-erythrose and NADPH model was downloaded from the PubChem website, and Autodock was used for molecular docking. 16 were selected. For the key sites that affect enzyme activity, Fold Using the constructed vector pET-28a-ER as a template, reasonably designed primers were used to introduce mutation sites through PCR to construct expression vectors for each erythrose reductase mutant; the primers are shown in Table 1.
表1:引物序列Table 1: Primer sequences
(2)湿菌体的获得(2) Obtaining wet bacteria
将各赤藓糖还原酶突变体表达载体转化至宿主感受态Escherichia coli BL21(DE3)中;验证成功的转化子菌液划线于终浓度100μg/ml的卡那霉素固体LB平板中,37℃静置培养12h,挑取单菌落接种于终浓度100μg/ml的卡那霉素的LB液体培养基中,37℃,220rpm摇床培养约7h直至OD600为0.8~1.0以获取种子液。种子液以体积浓度1%的接种量接种于终浓度100μg/ml的卡那霉素的LB液体培养基中,37℃培养2h后按照0.1mM的终浓度添加IPTG,28℃,220rpm诱导12h。所得菌液在超低温高速离心机中8000g、4℃条件下离心10min,获得的湿菌体置于-20℃冰箱保存。Each erythrose reductase mutant expression vector was transformed into the competent host Escherichia coli BL21 (DE3); the successfully verified transformant strain was streaked on a kanamycin solid LB plate with a final concentration of 100 μg/ml, 37 Cultivation for 12 hours at ℃, pick a single colony and inoculate it into LB liquid medium with kanamycin at a final concentration of 100 μg/ml, and culture it on a shaking table at 37 ℃ and 220 rpm for about 7 hours until the OD 600 is 0.8 to 1.0 to obtain the seed liquid. The seed solution was inoculated into LB liquid medium with a final concentration of kanamycin of 100 μg/ml at an inoculation volume of 1%. After culturing for 2 hours at 37°C, IPTG was added at a final concentration of 0.1mM and induced at 28°C and 220 rpm for 12 hours. The obtained bacterial liquid was centrifuged in an ultra-low temperature high-speed centrifuge at 8000g and 4°C for 10 minutes, and the wet bacterial cells obtained were stored in a -20°C refrigerator.
(3)粗酶液的制备(3) Preparation of crude enzyme solution
称取2g静息细胞,重悬于10mL的50mM PBS(pH=6.0)缓冲液中,利用超声破碎,释放胞内蛋白,破碎液始终置于冰浴状态,破碎程序为:功率250W,破碎时间1s,间隔时间2s,总破碎时间10min。破碎结束后将混合液置于10000g转速,4℃下离心10min,除去细胞碎片等固体物,收集上清液为粗酶液。将其使用50mM PBS(pH=6.0)缓冲液稀释40倍,稀释液可用于后续酶活测定反应。Weigh 2g of resting cells and resuspend them in 10mL of 50mM PBS (pH=6.0) buffer. Use ultrasonic disruption to release intracellular proteins. The disruption solution should always be placed in an ice bath. The disruption procedure is: power 250W, disruption time 1s, interval time 2s, total crushing time 10min. After the crushing is completed, place the mixed solution at 10,000 g and centrifuge at 4°C for 10 min to remove solid matter such as cell debris and collect the supernatant as crude enzyme solution. Dilute it 40 times with 50mM PBS (pH=6.0) buffer, and the diluted solution can be used for subsequent enzyme activity measurement reactions.
(4)突变体的粗筛(4) Coarse screening of mutants
赤藓糖还原酶在催化D-赤藓糖生成赤藓糖醇的过程中需要消耗NADPH作为辅因子,粗筛通过检测NADPH消耗量来反应赤藓糖还原酶的酶活。以获得的粗酶液作为催化液,通过酶标仪检测340nm下吸光度的变化值计算NADPH的消耗量进而反应酶活,实现对赤藓糖还原酶突变体的粗筛。Erythrose reductase needs to consume NADPH as a cofactor in the process of catalyzing D-erythrose to produce erythritol. The coarse screen reflects the enzyme activity of erythrose reductase by detecting NADPH consumption. The crude enzyme solution obtained was used as the catalytic solution, and the change in absorbance at 340 nm was detected by a microplate reader to calculate the consumption of NADPH and then react the enzyme activity to achieve a rough screening of erythrose reductase mutants.
粗筛酶活反应体系为:150μL 50mM PBS(pH=6.0),10μL D-赤藓糖(400mM),20μLNADPH(2mM),20μL粗酶液。The crude screening enzyme activity reaction system is: 150 μL 50mM PBS (pH=6.0), 10μL D-erythrose (400mM), 20μL NADPH (2mM), 20μL crude enzyme solution.
粗筛酶活测定方法:反应在96孔细胞培养板中进行,单个反应的总体积为200μL,先加入150μL 50mM PBS(pH=6.0),然后加入10μL400 mM D-赤藓糖,随后加入20μL 2mMNADPH,最后使用八连排抢分别加入20μL稀释到适当倍数的赤藓糖还原酶野生型及突变体的粗酶液,反应在30℃下进行,通过酶标仪检测反应前1min在340nm下吸光度的变化值从而计算出NADPH的消耗量。以反应开始前1min消耗1mM NADPH所需要的酶量为一个酶活力单位(U),相对酶活=(突变体酶活力单位/野生型酶活力单位)*100%。以此确定了酶活正向提升的6个赤藓糖还原酶单突变体,对这6个突变点进行两两组合构建15个双突变体,最终获得的突变体K26N、K26N/G215N、K26N/F216Y、K26N/V295M相较于野生型酶活分别提升了32.2%、35.6%、27.7%、48.0%,对这些突变体进行了进一步的催化反应。Crude screening enzyme activity assay method: The reaction is carried out in a 96-well cell culture plate. The total volume of a single reaction is 200 μL. First add 150 μL 50mM PBS (pH=6.0), then add 10 μL 400 mM D-erythrose, and then add 20 μL 2mMNADPH. , and finally use eight consecutive rows to add 20 μL of crude enzyme solution of erythrose reductase wild type and mutant diluted to appropriate multiples. The reaction is carried out at 30°C, and the absorbance at 340nm is detected by a microplate reader 1 minute before the reaction. Change the value to calculate NADPH consumption. The amount of enzyme required to consume 1mM NADPH 1 minute before the reaction is started is one enzyme activity unit (U), and the relative enzyme activity = (mutant enzyme activity unit/wild-type enzyme activity unit)*100%. In this way, 6 single mutants of erythrose reductase with positive increase in enzyme activity were determined. These 6 mutation points were combined in pairs to construct 15 double mutants. The final mutants K26N, K26N/G215N, and K26N were obtained. The enzyme activities of /F216Y and K26N/V295M were increased by 32.2%, 35.6%, 27.7%, and 48.0% respectively compared with the wild type. Further catalytic reactions were carried out on these mutants.
实施例2:赤藓糖还原酶突变体对赤藓糖还原酶酶活表达的影响Example 2: Effect of erythrose reductase mutants on the expression of erythrose reductase enzyme activity
以pET-28a-ER为模板,利用引物K26N-F、K26N-R(如表1)进行PCR,突变第26号位甘氨酸替换为天冬酰胺,条带大小验证正确后转入Escherichia coli BL21(DE3)感受态,获得定点突变菌株命名为Escherichia coli BL21(DE3)pET-28a-ERK26N。设计引物G215N-F/G215N-R,F216Y-F/F216Y-R,V295M-F/V295M-R(如表1),以Escherichia coli BL21(DE3)pET-28a-ER K26N为模板进行PCR,分别构建双点突变的赤藓糖还原酶突变体菌株Escherichia coli BL21(DE3)pET-28a-ERK26N/G215N,Escherichia coli BL21(DE3)Use pET-28a-ER as the template, use primers K26N-F and K26N-R (as shown in Table 1) to perform PCR, mutate the glycine at position 26 to asparagine, and transfer the band size to Escherichia coli BL21 ( DE3) competent state, the site-directed mutant strain was obtained and named Escherichia coli BL21(DE3)pET-28a-ERK26N. Design primers G215N-F/G215N-R, F216Y-F/F216Y-R, V295M-F/V295M-R (as shown in Table 1), and use Escherichia coli BL21(DE3)pET-28a-ER K26N as the template for PCR, respectively. Construction of double-point mutation erythrose reductase mutant strain Escherichia coli BL21(DE3)pET-28a-ERK26N/G215N, Escherichia coli BL21(DE3)
pET-28a-ER K26N/F216Y,Escherichia coli BL21(DE3)pET-28a-ER K26N/V295M。pET-28a-ER K26N/F216Y, Escherichia coli BL21(DE3)pET-28a-ER K26N/V295M.
以赤藓糖还原酶野生型菌株pET28a-ER以及构建好的酶活提升的各个赤藓糖还原酶突变体菌株(pET-28a-ER K26N、pET-28a-ER K26N/G215N、pET-28a-ER K26N/F216Y、pET-28a-ER K26N/V295M)作为模板,利用表1中所示引物以分别扩增赤藓糖还原酶野生型ER及突变体(ER K26N、ER K26N/G215N、ER K26N/F216Y、ER K26N/V295M)的基因片段。以实验室已有的含有pCDF-Dute-GDH的菌株为模板,利pCDF-Dute-GDH-F/pCDF-Dute-GDH-R引物对,扩增葡萄糖脱氢酶GDH表达框架。对扩增片段通过核酸凝胶电泳验证条带长度,扩增片段正常,核酸胶图如图1所示。分别将含有赤藓糖还原酶野生型或突变体的编码基因以及含有葡萄糖脱氢酶编码基因的两片段进行一步克隆得到双表达载体pCDF-Dute-ER-GDH,并转入宿主Escherichia coli BL21(DE3)。以与实施例1(2)中相同的方法制备含有赤藓糖还原酶突变体与葡萄糖脱氢酶共表达基因的Escherichia coli BL21(DE3)/pCDF-Dute-ER-GDH湿菌体,将其重悬于50mM PBS(pH=6.0)缓冲液中,通过SDS-PAGE凝胶电泳验证蛋白表达情况,重组菌正确表达蛋白,表达情况如图2所示。The erythrose reductase wild-type strain pET28a-ER and the constructed erythrose reductase mutant strains with improved enzyme activity (pET-28a-ER K26N, pET-28a-ER K26N/G215N, pET-28a- ER K26N/F216Y, pET-28a-ER K26N/V295M) as template, use the primers shown in Table 1 to amplify erythrose reductase wild-type ER and mutants (ER K26N, ER K26N/G215N, ER K26N) respectively. /F216Y, ER K26N/V295M) gene fragment. Using the strain containing pCDF-Dute-GDH existing in the laboratory as a template, the pCDF-Dute-GDH-F/pCDF-Dute-GDH-R primer pair was used to amplify the glucose dehydrogenase GDH expression framework. The amplified fragment was verified by nucleic acid gel electrophoresis to verify the band length. The amplified fragment was normal, and the nucleic acid gel diagram is shown in Figure 1. The two fragments containing the coding gene for erythrose reductase wild type or mutant and the coding gene for glucose dehydrogenase were cloned in one step to obtain the dual expression vector pCDF-Dute-ER-GDH, and transformed into the host Escherichia coli BL21 ( DE3). Escherichia coli BL21(DE3)/pCDF-Dute-ER-GDH wet cells containing erythrose reductase mutant and glucose dehydrogenase co-expression genes were prepared in the same manner as in Example 1(2), and Resuspend in 50mM PBS (pH=6.0) buffer, and verify the protein expression through SDS-PAGE gel electrophoresis. The recombinant bacteria correctly express the protein. The expression is shown in Figure 2.
为探究赤藓糖还原酶突变体对赤藓糖还原酶酶活表达的影响,将上述收集到的湿菌体作为催化剂,进行以D-赤藓糖为底物生成赤藓糖醇的生物催化反应,检测赤藓糖还原酶野生型或其突变体的催化活性。In order to explore the effect of erythrose reductase mutants on the expression of erythrose reductase enzyme activity, the wet bacterial cells collected above were used as catalysts to perform biocatalysis to generate erythritol using D-erythrose as the substrate. Reaction to detect the catalytic activity of erythrose reductase wild type or its mutants.
催化反应体系中含有终浓度50mM的D-赤藓糖,100mM的葡萄糖,20g/L的湿菌体;反应在30℃,800rpm的条件下进行。The catalytic reaction system contains D-erythrose with a final concentration of 50mM, 100mM glucose, and 20g/L wet cells; the reaction is carried out at 30°C and 800rpm.
催化反应中赤藓糖还原酶酶活力的测定方法:反应在1.5mL EP管中进行,单个反应总体系为500μL,先加入362μL 50mM PBS(pH=6.0),然后加入25μL 2M葡萄糖,随后加入50μL稀释到适当倍数的赤藓糖还原酶野生型/突变体和葡萄糖脱氢酶共表达湿菌体,将上述反应混合液预先反应2min以调动起辅酶循环系统,最后加入底物63μL400 mM D-赤藓糖。从加入底物开始计时,反应30min后热终止反应,即对装有反应混合液的1.5mL EP管沸水浴10min。将处理后的反应液进行离心,吸取上清液稀释2倍后进行进行高效液相检测。配制不同浓度的赤藓糖醇溶液,并用示差液相检测峰面积,根据标准曲线计算产量,相对酶活=(突变体赤藓糖醇产量/出发菌株赤藓糖醇产量)*100%。结果如图4所示。其中突变体K26N酶活提升25.9%,K26N/G215N酶活提升25.7%,K26N/F216Y酶活提升38.5%,K26N/V295M酶活提升43.9%。Determination method of erythrose reductase enzyme activity in catalytic reaction: The reaction is carried out in a 1.5mL EP tube. The total system of a single reaction is 500μL. First add 362μL 50mM PBS (pH=6.0), then add 25μL 2M glucose, and then add 50μL Dilute the erythrose reductase wild type/mutant and glucose dehydrogenase to wet bacterial cells co-expressed to appropriate multiples. Pre-react the above reaction mixture for 2 minutes to mobilize the coenzyme circulation system. Finally, add 63 μL of 400 mM D-erythrose substrate as the substrate. Moss sugar. Start timing from the addition of substrate, and thermally terminate the reaction after 30 minutes of reaction, that is, place the 1.5 mL EP tube containing the reaction mixture in a boiling water bath for 10 minutes. The processed reaction solution was centrifuged, and the supernatant was aspirated and diluted 2 times for high-performance liquid phase detection. Prepare erythritol solutions of different concentrations, and use differential liquid phase to detect the peak area. Calculate the yield according to the standard curve. Relative enzyme activity = (mutant erythritol yield/starting strain erythritol yield)*100%. The results are shown in Figure 4. Among them, the enzyme activity of mutant K26N increased by 25.9%, the enzyme activity of K26N/G215N increased by 25.7%, the enzyme activity of K26N/F216Y increased by 38.5%, and the enzyme activity of K26N/V295M increased by 43.9%.
其中,为探索合适的反应时间,催化反应首先以赤藓糖还原酶野生型与葡萄糖脱氢酶共表达的重组菌湿菌体中进行反应时间进程的探索,在反应进行的第1min、3min、5min、10min、30min、60min、90min取样,通过高效液相色谱分别检测D-赤藓糖和赤藓糖醇的含量,反应进程结果图如图3所示。反应进行到90min即达平衡,为反应突变体与野生型的酶活差异,取反应达平衡前30%处的反应时间作为赤藓糖还原酶突变体及野生型间比较的反应时长,确定后续反应总时长为30min。Among them, in order to explore the appropriate reaction time, the catalytic reaction was first carried out in wet cells of recombinant bacteria co-expressing wild-type erythrose reductase and glucose dehydrogenase. During the 1st, 3rd and 3rd minutes of the reaction, Samples were taken at 5 min, 10 min, 30 min, 60 min, and 90 min, and the contents of D-erythrose and erythritol were detected by high-performance liquid chromatography. The reaction process results are shown in Figure 3. The reaction reaches equilibrium after 90 minutes, which is the difference in enzyme activity between the reaction mutant and the wild type. The reaction time at 30% before the reaction reaches equilibrium is used as the reaction time for comparison between the erythrose reductase mutant and the wild type to determine the subsequent The total reaction time is 30min.
实施例3:高产赤藓糖醇基因工程菌的构建及应用Example 3: Construction and application of genetically engineered bacteria with high yield of erythritol
利用CRISPR-Cas9基因编辑技术实现赤藓糖还原酶野生型以及突变体ER K26N/V295M编码基因的定点插入。首先将赤藓糖还原酶野生型ER以及突变体ER K26N/V295M的基因片段整合到pINA1312载体上的hp4d组合型启动子以及XPR2 TER终止子中间,获得ER及ERK26N/V295M基因的完整表达框。后分别构建载体pCRISPRyl-URA-MHY(ER)、pCRISPRyl-URA-MHY(ERK26N/V295M),将完整的赤藓糖还原酶野生型或突变体基因表达框置于MHY位点的上游同源臂和下游同源臂之间。提取pCRISPRyl-URA-MHY(ER)、pCRISPRyl-URA-MHY(ERK26N/V295M)菌株质粒,并转入解脂耶氏酵母Yarrowia lipolytica Po1g感受态中,经验证获得赤藓糖还原酶表达框架定点插入成功的菌株Yarrowia lipolytica Po1g::ER、Yarrowialipolytica Po1g::ER K26N/V295M。CRISPR-Cas9 gene editing technology was used to achieve site-specific insertion of genes encoding erythrose reductase wild-type and mutant ER K26N/V295M. First, the gene fragments of erythrose reductase wild-type ER and mutant ER K26N/V295M were integrated into the hp4d combined promoter and XPR2 TER terminator on the pINA1312 vector to obtain the complete expression cassettes of the ER and ERK26N/V295M genes. Then the vectors pCRISPRyl-URA-MHY(ER) and pCRISPRyl-URA-MHY(ERK26N/V295M) were constructed respectively, and the complete erythrose reductase wild-type or mutant gene expression cassette was placed on the upstream homology arm of the MHY site. and between downstream homology arms. Extract the pCRISPRyl-URA-MHY(ER) and pCRISPRyl-URA-MHY(ERK26N/V295M) strain plasmids and transfer them into Yarrowia lipolytica Po1g competent cells. After verification, the site-directed insertion of the erythrose reductase expression framework is obtained. Successful strains Yarrowia lipolytica Po1g::ER, Yarrowialipolytica Po1g::ER K26N/V295M.
其中,解脂耶氏酵母Yarrowia lipolytica Po1g底盘菌株感受态的制备方法包括:从保藏的甘油管取100μL的Yarrowia lipolytica Po1g菌液,涂布于YPD固体平板中,30℃培养箱静置培养约24h。用无菌枪头刮取适量培养好的解脂耶氏酵母细胞,重悬于预冷的装有1ml TE Buffer(1M,pH=7)的无菌EP管中,5000rpm离心5min后倒掉上清液,将细胞重悬于600μL的醋酸锂(0.1M,pH=6.0)溶液中,30℃恒温培养箱孵育1h,每10min翻转重悬一次。之后5000rpm离心5min后倒掉上清液,加入100μL的0.1M醋酸锂重悬菌体即得感受态细胞。将感受态分装于1.5mL的无菌EP管,每管40μL,用于后续转化实验。Among them, the method for preparing the competent base strain of Yarrowia lipolytica Po1g includes: taking 100 μL of Yarrowia lipolytica Po1g bacterial liquid from the preserved glycerol tube, spreading it on a YPD solid plate, and cultivating it statically in a 30°C incubator for about 24 hours. . Use a sterile pipette tip to scrape an appropriate amount of cultured Yarrowia lipolytica cells, resuspend them in a pre-cooled sterile EP tube containing 1ml TE Buffer (1M, pH=7), centrifuge at 5000rpm for 5 minutes and then pour it out. supernatant, resuspend the cells in 600 μL of lithium acetate (0.1M, pH=6.0) solution, incubate in a 30°C constant-temperature incubator for 1 hour, and turn over and resuspend every 10 minutes. Then centrifuge at 5000 rpm for 5 min, discard the supernatant, and add 100 μL of 0.1 M lithium acetate to resuspend the cells to obtain competent cells. Dispense the competent cells into 1.5 mL sterile EP tubes, 40 μL per tube, for subsequent transformation experiments.
将质粒转化至上述Yarrowia lipolytica Po1g底盘菌株感受态的方法包括:取40μL感受态细胞,依次加入2μL 10mg/ml鲑鱼精DNA和10μL质粒,吹打混匀后,于30℃恒温培养箱中静置培养15min。依次加入350μL PEG4000-LiAc(0.1M,pH=6.0),16.7μL 1M DTT,于30℃恒温培养箱培养1h。加入46.7μLDMSO,39℃水浴锅热击10min。加入600μL 0.1M醋酸锂并缓慢吹打混匀,30℃恒温培养箱静置30min后涂布于SD固体培养基。The method of transforming the plasmid into the competent form of the above-mentioned Yarrowia lipolytica Po1g chassis strain includes: taking 40 μL of competent cells, adding 2 μL of 10 mg/ml salmon sperm DNA and 10 μL of plasmid in sequence, pipetting to mix, and then culturing statically in a 30°C constant-temperature incubator. 15 minutes. Add 350 μL PEG4000-LiAc (0.1M, pH=6.0) and 16.7 μL 1M DTT in sequence, and incubate in a 30°C constant-temperature incubator for 1 hour. Add 46.7 μL DMSO and heat shock in a water bath at 39°C for 10 min. Add 600 μL of 0.1M lithium acetate and mix slowly by pipetting, let stand in a 30°C constant temperature incubator for 30 minutes, and then spread on SD solid medium.
分别将上述转化成功的基因工程菌株Yarrowia lipolytica Po1g::ER、Yarrowialipolytica Po1g::ER K26N/V295M以及底盘菌株Yarrowia lipolytica Po1g划线于YPD固体平板中30℃静置培养24h,挑取单菌落接种于YPD液体培养基,置于200rpm转速摇床中30℃培养24h,获得种子液;以2%体积接种量接种种子液于ESM发酵培养基中,220rpm培养144h。将发酵后培养液离心,取上清稀释到适当倍数,使用Bio-RadAminex HPX-87H层析柱进行安捷伦示差液相检测赤藓糖醇的产量。结果如图5所示,高产赤藓糖醇基因工程菌Yarrowia lipolytica Po1g::ER K26N/V295M的赤藓糖醇产量达到47g/L,较底盘菌株Yarrowia lipolytica Po1g以及过表达野生型赤藓糖还原酶编码基因的基因工程菌株Yarrowia lipolytica Po1g::ER产量分别提升了14.59%和8.4%。The above-mentioned successfully transformed genetically engineered strains Yarrowia lipolytica Po1g::ER, Yarrowialipolytica Po1g::ER K26N/V295M and chassis strain Yarrowia lipolytica Po1g were streaked on YPD solid plates and cultured statically at 30°C for 24 hours, and single colonies were picked and inoculated YPD liquid medium was placed in a shaker with a rotation speed of 200 rpm and cultured at 30°C for 24 hours to obtain a seed liquid; the seed liquid was inoculated into the ESM fermentation medium with an inoculation volume of 2% and cultured at 220 rpm for 144 hours. Centrifuge the post-fermentation culture fluid, take the supernatant and dilute it to an appropriate multiple, and use a Bio-RadAminex HPX-87H chromatography column to perform Agilent differential liquid phase detection of erythritol production. The results are shown in Figure 5. The erythritol production of the high-yield genetically engineered strain Yarrowia lipolytica Po1g::ER K26N/V295M reached 47g/L, which was lower than that of the bottom strain Yarrowia lipolytica Po1g and the overexpressed wild-type erythritol. The genetically engineered strain Yarrowia lipolytica Po1g::ER with enzyme encoding genes increased the production by 14.59% and 8.4% respectively.
以上所述的实施例仅仅是对本发明的优选实施方式进行描述,并非对本发明的范围进行限定,在不脱离本发明设计精神的前提下,本领域普通技术人员对本发明的技术方案作出的各种变形和改进,均应落入本发明的保护范围内。The above-described embodiments are only descriptions of preferred embodiments of the present invention and do not limit the scope of the present invention. Without departing from the design spirit of the present invention, those of ordinary skill in the art may make various modifications to the technical solutions of the present invention. All deformations and improvements shall fall within the protection scope of the present invention.
Claims (10)
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202311537001.5A CN117625564A (en) | 2023-11-17 | 2023-11-17 | Erythrose reductase mutant and application thereof |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202311537001.5A CN117625564A (en) | 2023-11-17 | 2023-11-17 | Erythrose reductase mutant and application thereof |
Publications (1)
Publication Number | Publication Date |
---|---|
CN117625564A true CN117625564A (en) | 2024-03-01 |
Family
ID=90026160
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CN202311537001.5A Pending CN117625564A (en) | 2023-11-17 | 2023-11-17 | Erythrose reductase mutant and application thereof |
Country Status (1)
Country | Link |
---|---|
CN (1) | CN117625564A (en) |
-
2023
- 2023-11-17 CN CN202311537001.5A patent/CN117625564A/en active Pending
Similar Documents
Publication | Publication Date | Title |
---|---|---|
KR100872694B1 (en) | Arabinos isomerase expressed from a strain of the genus Corynebacterium and a method for preparing tagatose using the same | |
US8900838B2 (en) | Method for the preparation of 1,3-propanediol from sucrose | |
WO2022001038A1 (en) | Phosphinothricin dehydrogenase mutant, genetically engineered bacterium, and one-pot multi-enzyme synchronous directed evolution method | |
KR20220139351A (en) | Modified Microorganisms and Methods for Improved Production of Ectoins | |
CN112852795B (en) | Psicose 3-epimerase mutant, engineering bacterium for expressing mutant and application | |
CN105671010A (en) | Aldehyde ketone reductase mutant, gene, engineering bacterium and application of mutant | |
CN103898072B (en) | A kind of Ketoreductase mutant and application thereof | |
CN107002019A (en) | The method for producing the recombination yeast of 3 hydracrylic acids and 3 hydracrylic acids being produced using it | |
CN113151201B (en) | High thermostability and high activity isoeugenol monooxygenase mutant and its application | |
CN115960875A (en) | A mutant enzyme of alginate lyase with improved thermostability | |
JP2022544085A (en) | Psicose 3-epimerase mutant, genetically engineered fungus for expressing same, immobilized enzyme and immobilization method thereof | |
CN111808829B (en) | Gamma-glutamyl methylamine synthetase mutant and application thereof | |
CN108048440B (en) | A kind of high temperature resistant glucose isomerase mutant and its application | |
CN105018443B (en) | A kind of epoxide hydrolase mutant and preparation method thereof | |
CN114657159B (en) | 4-hydroxyl-L-threonine-phosphate dehydrogenase PdxA mutant and application thereof in preparation of vitamin B 6 In (1) | |
CN110055233B (en) | A MTSase mutant with improved thermal stability and its application | |
CN113337495B (en) | A kind of method and application of improving sialic acid production | |
CN113201516B (en) | P-nitrobenzyl esterase mutant and application thereof | |
CN110358745B (en) | 4-xylitol dehydrogenase mutant and application thereof | |
CN117625564A (en) | Erythrose reductase mutant and application thereof | |
CN114736884B (en) | Cytidine monophosphate kinase mutant and gene and application thereof | |
Li et al. | Characterization of xylitol 4-dehydrogenase from Erwinia aphidicola and its co-expression with NADH oxidase in Bacillus subtilis | |
CN110452899B (en) | Glucose isomerase, mutant and application of mutant in preparation of D-fructose | |
CN115058401B (en) | Ketopantoic acid hydroxymethyl transferase mutant, coding gene and application | |
CN112680425B (en) | A kind of alcohol dehydrogenase mutant and its application |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PB01 | Publication | ||
PB01 | Publication | ||
SE01 | Entry into force of request for substantive examination | ||
SE01 | Entry into force of request for substantive examination |