CN117603927A - Novel firefly luciferase variant and application thereof in organoid cell viability detection - Google Patents

Novel firefly luciferase variant and application thereof in organoid cell viability detection Download PDF

Info

Publication number
CN117603927A
CN117603927A CN202311576815.XA CN202311576815A CN117603927A CN 117603927 A CN117603927 A CN 117603927A CN 202311576815 A CN202311576815 A CN 202311576815A CN 117603927 A CN117603927 A CN 117603927A
Authority
CN
China
Prior art keywords
organoid
cell
cell viability
amino acid
firefly luciferase
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
CN202311576815.XA
Other languages
Chinese (zh)
Inventor
岳敏
李民强
符海鑫
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Dalian Bgbioscience Co ltd
Original Assignee
Dalian Bgbioscience Co ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Dalian Bgbioscience Co ltd filed Critical Dalian Bgbioscience Co ltd
Priority to CN202311576815.XA priority Critical patent/CN117603927A/en
Publication of CN117603927A publication Critical patent/CN117603927A/en
Pending legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/0004Oxidoreductases (1.)
    • C12N9/0069Oxidoreductases (1.) acting on single donors with incorporation of molecular oxygen, i.e. oxygenases (1.13)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/66Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving luciferase
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y113/00Oxidoreductases acting on single donors with incorporation of molecular oxygen (oxygenases) (1.13)
    • C12Y113/12Oxidoreductases acting on single donors with incorporation of molecular oxygen (oxygenases) (1.13) with incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(1.13.12)
    • C12Y113/12007Photinus-luciferin 4-monooxygenase (ATP-hydrolysing) (1.13.12.7), i.e. firefly-luciferase
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/5005Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
    • G01N33/5008Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2503/00Use of cells in diagnostics
    • C12N2503/02Drug screening
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2333/00Assays involving biological materials from specific organisms or of a specific nature
    • G01N2333/90Enzymes; Proenzymes
    • G01N2333/902Oxidoreductases (1.)
    • G01N2333/90241Oxidoreductases (1.) acting on single donors with incorporation of molecular oxygen, i.e. oxygenases (1.13)
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2500/00Screening for compounds of potential therapeutic value
    • G01N2500/10Screening for compounds of potential therapeutic value involving cells

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Immunology (AREA)
  • Genetics & Genomics (AREA)
  • Biomedical Technology (AREA)
  • Molecular Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Urology & Nephrology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Medicinal Chemistry (AREA)
  • Hematology (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Cell Biology (AREA)
  • Toxicology (AREA)
  • Biophysics (AREA)
  • Food Science & Technology (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Enzymes And Modification Thereof (AREA)

Abstract

The invention belongs to the field of molecular biology, and particularly discloses a novel firefly luciferase variant and application thereof in organoid cell viability detection. The activity and stability of the novel firefly luciferase mutant disclosed by the invention are obviously improved, and the prepared organoid cell activity detection reagent has stronger chemiluminescence brightness and longer luminescence duration; the invention also provides a novel firefly luciferase variant-based organoid cell viability detection method which is simple to operate, time-saving, labor-saving, high in sensitivity and high in stability, and the organoid cell viability detection method is used for detecting the change of ATP content in organoid cells and reacting to the change of organoid viability. Meanwhile, the organoid cell viability detection reagent provided by the invention can realize rapid organoid viability detection without cell washing, culture medium removal or multi-step pipetting operation.

Description

Novel firefly luciferase variant and application thereof in organoid cell viability detection
Technical Field
The invention belongs to the field of molecular biology, and particularly discloses a novel firefly luciferase variant and application thereof in organoid cell viability detection.
Background
The most direct source of energy in organisms is Adenosine Triphosphate (ATP), which is completely degraded when cells die, and ATP levels reflect the number of living cells. Organoid viability can thus be assessed by analysis of the ATP of the organoids. ATP is rapidly reduced and decomposed into adenosine and phosphoric acid due to the activity of an intrinsic ATP degrading enzyme in serum or cell origin. Thus, rapid disruption of cells and rapid and sufficient release of ATP becomes a critical factor in accurately detecting cell viability.
Firefly luciferase (Firefly Luciferase) is an enzyme that catalyzes the oxidation of firefly luciferin and the production of bioluminescence in the presence of ATP, divalent metal ions such as magnesium ions and oxygen. In the presence of excess firefly luciferase and luciferin, the generation of fluorescence is proportional to the amount of ATP present in the reaction, and this luminescence property makes firefly luciferase widely used in various studies, production, etc. for measuring ATP. However, the use of wild-type (WT) beetle luciferases is often limited by the inadequate stability of these enzymes at temperatures above 30 ℃. Furthermore, certain conditions may have an inhibitory effect on the luciferase reaction, thereby affecting the sensitivity of the assay.
The organoid is an in vitro 3D culture cultured by stem cells in an in-vivo microenvironment simulation mode, and with the development of 3D organoid culture technology, higher requirements are put forward on cell viability detection and the like, and when the common ATP chemiluminescent detection reagent is applied to organoid cell viability detection, the reagent has the defects of poor repeatability, poor linearity and poor accuracy. Therefore, there is a need to further improve the activity, stability, etc. of firefly luciferase and optimize the existing ATP chemiluminescent detection reagents so that they can meet the detection requirements of organoid viability.
Disclosure of Invention
In view of the deficiencies of the prior art, disclosed herein is a novel firefly luciferase variant and its use in organoid cell viability assays.
The invention comprises the following technical scheme:
a novel firefly luciferase variant comprising the amino acid sequence of any one of 1) -4):
1) An amino acid sequence as shown in SEQ ID No. 1;
2) An amino acid sequence of a fusion protein obtained by connecting a signal peptide and/or a tag to the N end and/or the C end of the amino acid sequence shown in SEQ ID No. 1;
2) Amino acid sequence of protein with same function obtained by substituting and/or deleting and/or adding one or several amino acid residues of the amino acid sequence shown in SEQ ID No. 1;
4) And SEQ ID No:1 is more than 95% and has the same function.
Preferably, the mutant of firefly luciferase according to the invention is a mutation occurring on the basis of a wild type firefly luciferase. The number of mutation sites is 4. The mutation site comprises that the 216 th amino acid is mutated from Asn to Ala, the 217 th amino acid is mutated from Ala to Leu, the 366 th amino acid is mutated from Lys to Arg, and the 465 th amino acid is mutated from Asn to Arg. In some embodiments, the amino acid sequence of the mutant is shown in SEQ ID NO.1.
Further, a biomaterial as described above comprising a biomaterial as defined in any one of a) to d),
a) A nucleic acid molecule comprising an amino acid sequence as set forth in SEQ ID NO. 1;
b) A recombinant vector comprising the nucleic acid molecule of a);
c) A recombinant microorganism comprising the nucleic acid molecule as described in a) or comprising the recombinant vector as described in b);
d) A recombinant cell comprising the nucleic acid molecule as set forth in a) or comprising the recombinant vector as set forth in b).
Further, the sequence of the nucleic acid molecule of the biological material is shown as SEQ ID NO. 2.
Further, the above-mentioned biological material, the said recombinant vector is a prokaryotic system expression vector or eukaryotic system expression vector; the prokaryotic system expression vector is an escherichia coli expression vector; the eukaryotic expression vector is a yeast expression vector, or an insect cell expression vector, or a mammalian cell expression vector.
Further, the above-mentioned biological material, the recombinant cell is a prokaryotic cell or a eukaryotic cell;
the prokaryotic cell is Escherichia coli; the eukaryotic cell is a yeast cell, or an insect cell, or a mammalian cell.
The invention also discloses a reagent for detecting the activity of organoid cells, which is characterized by comprising the firefly luciferase mutant according to claim 1.
Further, the organoid cell viability detection reagent further comprises: buffer solution, 1-10mg/ml fluorescein, 1-4% CHAPS, 1-4% ASB-14, 1-4% SB3-10, 1-5mM TBP, 5-50% glycerol, 3-7mM MgSO 4
Further, the invention discloses a kit for detecting the activity of organoid cells, which comprises the organoid cell activity detection reagent; the kit is formed by placing the above-described reagents in a suitable packaging material.
The invention also discloses application of the reagent or the kit in detecting the activity of organoid cells, wherein the detection of organoid cell activity refers to detection of cell activity in a drug screening experiment, a cell proliferation assay experiment, a cytotoxicity assay experiment or a tumor drug sensitivity experiment.
Furthermore, the invention discloses a using method of the organoid cell viability detection kit, which comprises the following steps:
uniformly mixing organoid cell viability detection reagent with organoid culture medium in equal proportion, then placing on a chemiluminescent plate reader, and setting a detection program as follows: shaking for 5min, incubating for 25min, and starting detection; and the luminescence value was recorded.
The invention has the following beneficial effects:
the invention provides a novel firefly luciferase mutant, which has obviously improved activity and stability, so that the organoid activity detection reagent has stronger chemiluminescence brightness and longer luminescence duration. The organoid activity detection reagent disclosed by the invention is specially used for detecting the cell activity of micro-tissues generated by 3D cell culture, contains a large amount of cracking components in a formula, has stronger cracking capacity, has stronger luciferase mutant stability, and further improves the stability of the reagent. Meanwhile, the organoid activity detection reagent provided by the invention can detect the result after 30min without cell washing, culture medium removal or multi-step pipetting operation, so that the efficiency is improved, the time is saved, and the organoid activity can be rapidly detected.
Drawings
Fig. 1: SDS-PAGE of luciferase mutant (M);
fig. 2: enzyme thermostability analysis graph;
fig. 3: a standard relationship between ATP solution concentration and fluorescence intensity;
fig. 4: a chemiluminescent brightness and stability comparison chart;
fig. 5: cell pellet lysis performance comparison.
Detailed Description
The following description of the technical solutions in the embodiments of the present invention will be clear and complete, and it is obvious that the described embodiments are only some embodiments of the present invention, but not all embodiments. All other embodiments, which can be made by those skilled in the art based on the embodiments of the invention without making any inventive effort, are intended to be within the scope of the invention. The appropriate amount of the invention is determined by one of ordinary skill in the art according to national technical specifications and practical production conditions. The raw materials described in the present invention are commercially available unless otherwise specified.
The specific sequence is as follows:
SEQ ID No.1=
Met Glu Asn Met Glu Asn Asp Glu Asn Ile Val Tyr Gly Pro Glu Pro Phe Tyr Pro Ile 20
Glu Glu Gly Ser Ala Gly Ala Gln Leu Arg Lys Tyr Met Asp Arg Tyr Ala Lys Leu Gly 40
Ala Ile Ala Phe Thr Asn Ala Leu Thr Gly Val Asp Tyr Thr Tyr Ala Glu Tyr Leu Glu 60
Lys Ser Cys Cys Leu Gly Glu Ala Leu Lys Asn Tyr Gly Leu Val Val Asp Gly Arg Ile 80
Ala Leu Cys Ser Glu Asn Cys Glu Glu Phe Phe Ile Pro Val Leu Ala Gly Leu Phe Ile 100
Gly Val Gly Val Ala Pro Thr Asn Glu Ile Tyr Thr Leu Arg Glu Leu Val His Ser Leu 120
Gly Ile Ser Lys Pro Thr Ile Val Phe Ser Ser Lys Lys Gly Leu Asp Lys Val Ile Thr 140
Val Gln Lys Thr Val Thr Ala Ile Lys Thr Ile Val Ile Leu Asp Ser Lys Val Asp Tyr 160
Arg Gly Tyr Gln Ser Met Asp Asn Phe Ile Lys Lys Asn Thr Pro Gln Gly Phe Lys Gly 180
Ser Ser Phe Lys Thr Val Glu Val Asn Arg Lys Glu Gln Val Ala Leu Ile Met Asn Ser 200
Ser Gly Ser Thr Gly Leu Pro Lys Gly Val Gln Leu Thr His Glu Ala Leu Val Thr Arg 220
Phe Ser His Ala Arg Asp Pro Ile Tyr Gly Asn Gln Val Ser Pro Gly Thr Ala Ile Leu 240
Thr Val Val Pro Phe His His Gly Phe Gly Met Phe Thr Thr Leu Gly Tyr Leu Thr Cys 260
Gly Phe Arg Ile Val Met Leu Thr Lys Phe Asp Glu Glu Thr Phe Leu Lys Thr Leu Gln 280
Asp Tyr Lys Cys Ser Ser Val Ile Leu Val Pro Thr Leu Phe Ala Ile Leu Asn Arg Ser 300
Glu Leu Leu Asp Lys Tyr Asp Leu Ser Asn Leu Val Glu Ile Ala Ser Gly Gly Ala Pro 320
Leu Ser Lys Glu Ile Gly Glu Ala Val Ala Arg Arg Phe Asn Leu Pro Gly Val Arg Gln 340
Gly Tyr Gly Leu Thr Glu Thr Thr Ser Ala Ile Ile Ile Thr Pro Glu Gly Asp Asp Lys 360
Pro Gly Ala Ser Gly Arg Val Val Pro Leu Phe Lys Ala Lys Val Ile Asp Leu Asp Thr 380
Lys Lys Thr Leu Gly Pro Asn Arg Arg Gly Glu Val Cys Val Lys Gly Pro Met Leu Met 400
Lys Gly Tyr Val Asp Asn Pro Glu Ala Thr Arg Glu Ile Ile Asp Glu Glu Gly Trp Leu 420
His Thr Gly Asp Ile Gly Tyr Tyr Asp Glu Glu Lys His Phe Phe Ile Val Asp Arg Leu 440
Lys Ser Leu Ile Lys Tyr Lys Gly Tyr Gln Val Pro Pro Ala Glu Leu Glu Ser Val Leu 460
Leu Gln His Pro Arg Ile Phe Asp Ala Gly Val Ala Gly Val Pro Asp Pro Ile Ala Gly 480
Glu Leu Pro Gly Ala Val Val Val Leu Glu Lys Gly Lys Ser Met Thr Glu Lys Glu Val 500
Met Asp Tyr Val Ala Ser Gln Val Ser Asn Ala Lys Arg Leu Arg Gly Gly Val Arg Phe 520
Val Asp Glu Val Pro Lys Gly Leu Thr Gly Lys Ile Asp Gly Lys Ala Ile Arg Glu Ile 540
Leu Lys Lys Pro Val Ala Lys Met His His His His His His 554
SEQ ID No.2=
ATGGAGAACATGGAGAATGATGAGAACATCGTGTACGGCCCGGAACCGTT
TTATCCGATTGAAGAAGGTAGCGCAGGTGCACAGCTGCGTAAATATATGG
ATCGTTATGCAAAACTGGGCGCCATTGCATTTACCAATGCACTGACCGGT
GTTGATTATACCTATGCAGAATATCTGGAGAAGAGCTGTTGCCTGGGTGA
AGCACTGAAAAATTATGGTCTGGTTGTTGACGGCCGCATTGCACTGTGTA
GCGAAAATTGTGAAGAATTTTTCATCCCGGTTCTGGCCGGCCTGTTTATT
GGTGTTGGTGTTGCACCGACCAATGAAATTTATACCCTGCGTGAACTGGT
TCACAGCCTGGGTATTAGCAAACCGACCATTGTTTTTAGCAGCAAAAAAG
GCCTGGATAAGGTGATCACCGTGCAGAAAACCGTTACCGCAATTAAAACC
ATTGTGATCCTGGACAGCAAGGTGGACTATCGCGGTTATCAGAGCATGGA
CAATTTTATCAAAAAGAACACCCCGCAGGGTTTTAAGGGTAGCAGCTTTA
AAACCGTTGAAGTGAACCGTAAGGAGCAGGTTGCACTGATTATGAATAGC
AGCGGTAGCACCGGTCTGCCGAAAGGTGTTCAGCTGACCCATGAAGCACT
GGTTACCCGTTTTAGCCATGCACGTGATCCGATTTATGGTAATCAGGTTA
GCCCGGGTACCGCAATTCTGACCGTTGTTCCGTTTCATCATGGTTTTGGT
ATGTTTACCACCCTGGGTTATCTGACCTGTGGTTTTCGTATTGTTATGCT
GACCAAATTCGACGAGGAGACATTTCTGAAAACCCTGCAGGATTATAAAT
GCAGCAGCGTTATTCTGGTGCCGACCCTGTTTGCAATTCTGAATCGTAGC
GAACTGCTGGATAAATATGATCTGAGCAATCTGGTTGAGATCGCCAGCGG
TGGTGCACCGTTAAGCAAAGAAATTGGTGAAGCAGTTGCACGCCGTTTTA
ATCTGCCGGGTGTTCGTCAGGGTTATGGTCTGACCGAAACCACCAGCGCA
ATTATTATTACCCCGGAAGGTGATGATAAACCGGGTGCAAGCGGTCGTGT
TGTTCCGCTGTTTAAAGCAAAAGTTATTGACCTGGACACCAAGAAAACCC
TGGGCCCGAATCGTCGTGGTGAAGTTTGTGTTAAAGGTCCGATGCTGATG
AAAGGTTATGTTGATAATCCGGAGGCCACCCGTGAAATTATTGATGAAGA
AGGTTGGCTGCATACCGGTGATATTGGTTATTATGATGAGGAGAAGCACT
TCTTCATCGTGGATCGCCTGAAAAGCCTGATCAAATATAAAGGCTACCAG
GTGCCGCCGGCAGAACTGGAAAGTGTTCTGCTGCAACATCCGCGTATTTT
TGATGCAGGTGTTGCAGGTGTTCCGGATCCGATTGCAGGTGAACTGCCGG
GTGCAGTTGTTGTTCTGGAAAAAGGTAAAAGCATGACCGAAAAAGAG
GTG
ATGGACTATGTTGCCAGCCAGGTTAGCAATGCAAAACGTCTGCGTGGT
GG
TGTTCGTTTTGTTGATGAAGTTCCGAAAGGTCTGACCGGTAAAATTGA
TG
GTAAAGCCATTCGTGAAATCCTGAAGAAGCCGGTTGCAAAAATGCATCAT
CATCATCATCATTAA。
example 1
Mutation, expression and purification of firefly luciferase.
The 216 th amino acid of the wild firefly luciferase is mutated from Asn to Ala, the 217 th amino acid is mutated from Ala to Leu, the 366 th amino acid is mutated from Lys to Arg, the 465 th amino acid is mutated from Asn to Arg, and the amino acid sequence is SEQ ID NO.1.
The preparation method of the firefly luciferase mutant comprises the following steps:
a. the 216 th amino acid of the amino acid sequence of firefly luciferase (GenBank: CAA 47358.1) is mutated from Asn to Ala, the 217 th amino acid is mutated from Ala to Leu, the 366 th amino acid is mutated from Lys to Arg, the 465 th amino acid is mutated from Asn to Arg, and a hexahistidine tag is added at the C end of the sequence to obtain a luciferase mutant, and the amino acid sequence of the luciferase mutant is SEQ ID NO.1. Optimizing the sequence of a gene coding region of the luciferase mutant according to the codon preference of the escherichia coli to obtain a firefly luciferase variant sequence with a nucleotide sequence of SEQ ID NO. 2;
b. adding restriction enzyme Nde I restriction enzyme site at the 5 'end of firefly luciferase variant sequence, adding restriction enzyme HindIII restriction enzyme site at the 3' end of optimized sequence, performing total gene synthesis (Beijing Liuhua big gene technology Co., ltd.), and connecting between Nde I restriction enzyme site and HindIII restriction enzyme site of prokaryotic expression vector pET30a (purchased from Novagen Co.), to obtain recombinant prokaryotic expression plasmid pET30a-M;
c. transforming the obtained recombinant prokaryotic expression plasmid pET30a-M into escherichia coli BL21 (DE 3) by a heat shock method, culturing on an LB plate containing kanamycin with the final concentration of 30 mug/ml, and selecting single colony for sequencing identification;
d. inoculating a single colony containing recombinant positive plasmid into LB liquid culture medium containing kanamycin with a final concentration of 30 mug/ml, culturing at 37 ℃ under shaking at 200rpm for 12-16 h, inoculating the cultured bacterial liquid into fresh LB liquid culture medium containing kanamycin with a volume ratio of 1%, culturing at 37 ℃ under shaking at 200rpm until the bacterial liquid concentration OD600 is 0.8-1.2, adding inducer IPTG to the working concentration of 1mM, continuing culturing for 24 h, centrifuging at 4 ℃ and 8000rpm for 10min, and collecting bacterial bodies;
e. the collected thalli are centrifugally washed twice by PBS, 1/10 volume of PBS is added into LB culture medium, thalli are fully suspended, PMSF is added into the mixture to the working concentration of 1mM, the mixture is uniformly mixed, the mixture is ultrasonically crushed on ice, the power is 200W, the ultrasonic waves are 5s, the interval is 5s and 10min, and then the mixture is centrifugally treated at the temperature of 4 ℃ and at the speed of 8000rpm for 30min, so that the supernatant containing the soluble total protein is obtained.
f. The method comprises the steps of adopting a Ni-NTA agarose chromatographic column, balancing the chromatographic column by using 5 times of column bed volume balancing buffer (20 mM phosphate, 500mM NaCl,5mM imidazole, pH 7.8), loading the supernatant containing the soluble total protein on the column at the speed of 1mL/min, adding an elution buffer (20 mM phosphate, 500mM NaCl,500mM imidazole, pH 7.8) for eluting after all the fluid in the chromatographic column flows out of a medium, collecting by a branch pipe, identifying the purity of each pipe of target protein by SDS-PAGE, collecting components with the purity of more than 95%, and storing in glycerol. The luciferase mutant (M) was subjected to SDS-PAGE electrophoresis, and the result of the electrophoresis is shown in FIG. 1.
Example 2
Luciferase mutant (M) activity assay and other enzymatic property assays.
Analysis of luminous intensity: protein concentration was measured by BCA protein concentration assay, and BSA was used as a standard curve. After the protein is quantified, 0.1mg/ml protein solution is prepared, and the measurement system is 10 mu l of the protein solution with the concentration of 0.1mg/ml, 30 mu l of pH 7.4, 50mM Tris-HCl and 10mM MgCl 2 Is used as a substrate mixture of 10. Mu.l. As shown in Table 1, the modified luciferase mutant (M) showed an improvement in enzyme activity by about 2-fold increase in luminescence intensity compared with the wild-type luciferase (WT) when measured by using a multifunctional microplate reader (BioTek).
TABLE 1 luciferase mutant (M) compared to luciferase luminescence intensity (RLU) of Wild Type (WT)
Luciferase enzyme RLU
WT 265946
M 539752
Thermal stability analysis: the wild type enzyme solution and the mutant enzyme solution are respectively placed in water baths with the temperature of 25 ℃,30 ℃, 35 ℃,37 ℃ and 40 ℃ for incubation for 10min, quickly taken out, placed in ice water for cooling for 1min, and then subjected to luminescence measurement. As shown in FIG. 2 (a), the luminescence intensity of both the wild type and the mutant luciferases decreased with the increase of the water bath temperature, the enzyme activity of the wild type was almost lost after 10min of water bath at 40℃and the luminescence intensity was very weak, but the mutant could maintain the luminescence intensity of more than 90%.
As shown in FIG. 2 (b), under the same measurement conditions, the luminous intensity of the wild type luciferase is reduced to about 30% of the original luminous intensity after 20min of water bath at 37 ℃ and weaker as the time is longer, but the mutant luciferase can still maintain more than 95% of the luminous intensity even after 20min of water bath at 37 ℃. The modified mutant has better thermal stability than wild luciferase, and can meet more practical application requirements.
Example 3
The organoid activity detection reagent is used for detecting ATP standard.
The protein concentration was determined according to the BCA protein concentration determination kit, and organoid activity detection reagents (formula: 5. Mu.g/ml firefly luciferase mutant, 50mM sodium citrate, pH 6.0,1mg/ml luciferin, 1% CHAPS, 1% ASB-14, 1% SB3-10, 1mM TBP, 5% glycerol, 3mM MgSO 4) were prepared from the firefly luciferase mutant obtained by purification.
The using effect of the 3D organoid activity detection reagent is determined by detecting an ATP standard substance, the ATP standard substance is diluted into ATP standard solutions with the concentration of 0, 20 mu M, 40 mu M, 60 mu M, 80 mu M and 100 mu M respectively by using PBS, 100 microliters of each ATP standard substance is added into a 96-well plate to be used as a standard substance hole, 100 microliters of the 3D organoid activity detection reagent is added into each hole, and chemiluminescence detection is carried out after uniform mixing. A standard relationship between ATP solution concentration and fluorescence intensity is plotted, see FIG. 3. The results show that the 3D organoid activity detection reagent has good linearity on the ATP standard in the concentration range of 0-100 mu M.
Example 4
The 3D organoid activity detection reagent is used for detecting organoid activity and detecting luminous signal stability.
According to the protein concentration measurement result of BCA protein concentration measurement kit, 3D organoid activity detection reagent (formula: 15. Mu.g/ml firefly luciferase mutant, 50mM MES, pH 6.0, 10mg/ml luciferin, 4% CHAPS, 4% ASB-14, 4% SB3-10, 5mM TBP, 50% glycerol, 7mM MgSO) was prepared from the firefly luciferase mutant obtained by purification 4 )。
HCT116 cells were directly suspended in matrigel at 10 μl/well, the number of cells contained therein was 1000 cells/well, then the cell suspension was inoculated in a 48-well plate, the plate was turned over after the inoculation was completed, and the cell suspension formed suspended droplets, and was coagulated at 37 ℃ for 30min. After solidification, enough McCOY' S5A complete medium to cover the matrix was slowly added along the walls of the wells and incubated for 5 days. Adding organoid activity detection reagent with the same volume as the culture medium into the culture hole, uniformly mixing, then placing on a chemiluminescent plate reader, and setting a detection program as follows: shaking for 5min, incubating for 25min, and starting detection; and the luminescence value was recorded every 5 min.
Control experiment: the experimental conditions are the same, and the commercially available P brand 2D cell viability detection reagent and organoid viability detection reagent are used as a control experiment to detect the organoid viability. Results of testing the viability of HCT 116D cell spheres using the present invention are shown in FIG. 4. The formulation of the embodiment shows better chemiluminescence brightness and stability than the commercially available 2D cell viability detection reagent and organoid viability detection reagent.
Example 5
Detection of cleavage effect of organoid vitality detection reagent
According to the protein concentration measurement result of the BCA protein concentration measurement kit, a 3D organoid activity detection reagent (formula: 10. Mu.g/ml firefly luciferase mutant, 100mM phosphate buffer salt, pH 6.0,8mg/ml luciferin, 2% CHAPS, 2% ASB-14, 2% SB3-10, TBP at a concentration of 2.5mM, 20% glycerol, 5mM MgSO 4) was prepared from the firefly luciferase mutant obtained by purification.
The combination of the surfactants ASB-14, SB3-10 and TBP enables the reagent to have stronger cracking capability, and the 3D organoid activity detection reagent of the embodiment is compared with the commercially available 2D cell activity detection reagent and organoid activity detection reagent for HCT 116D cytoball cracking performance, the detection result is shown in figure 5, and the cracking capability shown by the formula of the embodiment is better than that of the commercially available 2D cell activity detection reagent and organoid activity detection reagent.
From the above examples, the present invention provides a novel firefly luciferase mutant, the activity and stability of which are significantly improved, so that the organic organ activity detection reagent has stronger chemiluminescent brightness and longer luminescence duration. The organoid activity detection reagent disclosed by the invention is specially used for detecting the cell activity of micro-tissues generated by 3D cell culture, contains a large amount of cracking components in a formula, has stronger cracking capacity, has stronger luciferase mutant stability, and further improves the stability of the reagent. Meanwhile, the organoid activity detection reagent provided by the invention can detect the result after 30min without cell washing, culture medium removal or multi-step pipetting operation, so that the efficiency is improved, the time is saved, and the organoid activity can be rapidly detected.
The above embodiments are only preferred embodiments of the present invention, and the scope of the present invention is not limited thereto, i.e. the present invention is not limited to the above embodiments, but is capable of being modified and varied in all ways according to the following claims and the detailed description.

Claims (10)

1. A novel firefly luciferase variant comprising an amino acid sequence according to any one of claims 1) to 4):
1) An amino acid sequence as shown in SEQ ID No. 1;
2) An amino acid sequence of a fusion protein obtained by connecting a signal peptide and/or a tag to the N end and/or the C end of the amino acid sequence shown in SEQ ID No. 1;
2) Amino acid sequence of protein with same function obtained by substituting and/or deleting and/or adding one or several amino acid residues of the amino acid sequence shown in SEQ ID No. 1;
4) And SEQ ID No:1 is more than 95% and has the same function.
2. A biomaterial comprising a biomaterial according to any one of a) to d),
a) A nucleic acid molecule comprising an amino acid sequence as set forth in SEQ ID NO. 1;
b) A recombinant vector comprising the nucleic acid molecule of a);
c) A recombinant microorganism comprising the nucleic acid molecule as described in a) or comprising the recombinant vector as described in b);
d) A recombinant cell comprising the nucleic acid molecule as set forth in a) or comprising the recombinant vector as set forth in b).
3. The biomaterial according to claim 2, wherein the sequence of the nucleic acid molecule is as shown in SEQ ID No. 2.
4. The biomaterial of claim 2, wherein the recombinant vector is a prokaryotic or eukaryotic expression vector;
the prokaryotic system expression vector is an escherichia coli expression vector; the eukaryotic expression vector is a yeast expression vector, or an insect cell expression vector, or a mammalian cell expression vector.
5. The biomaterial of claim 2, wherein the recombinant cell is a prokaryotic cell or a eukaryotic cell;
the prokaryotic cell is Escherichia coli; the eukaryotic cell is a yeast cell, or an insect cell, or a mammalian cell.
6. An organoid cell viability assay reagent comprising the firefly luciferase mutant according to claim 1.
7. The organoid cell viability assay reagent of claim 6, further comprising: buffer solution, 1-10mg/ml fluorescein, 1-4% CHAPS, 1-4% ASB-14, 1-4% SB3-10, 1-5mM TBP, 5-50% glycerol, 3-7mM MgSO 4
8. A kit for detecting organoid cell viability, said kit comprising the organoid cell viability detection reagent of claim 6.
9. The use of a reagent according to claim 6 or 7 or a kit according to claim 8 for detecting organoid cell viability, wherein detecting organoid cell viability is detecting cell viability in a drug screening assay, a cell proliferation assay, a cytotoxicity assay or a tumour drug sensitivity assay.
10. The method of using the organoid cell viability assay kit of claim 8 comprising the steps of: uniformly mixing organoid cell viability detection reagent with organoid culture medium in equal proportion, then placing on a chemiluminescent plate reader, and setting a detection program as follows: shaking for 5min, incubating for 25min, and starting detection; and the luminescence value was recorded.
CN202311576815.XA 2023-11-24 2023-11-24 Novel firefly luciferase variant and application thereof in organoid cell viability detection Pending CN117603927A (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CN202311576815.XA CN117603927A (en) 2023-11-24 2023-11-24 Novel firefly luciferase variant and application thereof in organoid cell viability detection

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN202311576815.XA CN117603927A (en) 2023-11-24 2023-11-24 Novel firefly luciferase variant and application thereof in organoid cell viability detection

Publications (1)

Publication Number Publication Date
CN117603927A true CN117603927A (en) 2024-02-27

Family

ID=89957381

Family Applications (1)

Application Number Title Priority Date Filing Date
CN202311576815.XA Pending CN117603927A (en) 2023-11-24 2023-11-24 Novel firefly luciferase variant and application thereof in organoid cell viability detection

Country Status (1)

Country Link
CN (1) CN117603927A (en)

Similar Documents

Publication Publication Date Title
CN113061591B (en) Novel firefly luciferase mutant, preparation method and application thereof
AU773714B2 (en) Cell assay, method and reagents
CN114350627B (en) Firefly luciferase mutant and preparation method thereof
CN111575265B (en) Keratinase mutant with improved thermal stability
Kapitan et al. Click beetle luciferases as dual reporters of gene expression in Candida albicans
CN116555204B (en) Mutant luciferase with improved performance and application thereof
Prodromou et al. The aconitase of Escherichia coli: purification of the enzyme and molecular cloning and map location of the gene (acn)
CN117603927A (en) Novel firefly luciferase variant and application thereof in organoid cell viability detection
CN109161556B (en) M1PDH gene in kelp, protein and application thereof
US11788068B2 (en) Modified/mutant bacterial luciferases
CN116121215A (en) Mutant of glycerophosphate oxidase and application thereof
Xiong et al. Directed evolution of a beta-galactosidase from Pyrococcus woesei resulting in increased thermostable beta-glucuronidase activity
Xiong et al. High efficiency and throughput system in directed evolution in vitro of reporter gene
RU2420594C2 (en) Agent for adenosine-5'-triphosphate
CN116814568B (en) Firefly luciferase mutant, protein, nucleic acid, recombinant vector, recombinant bacterium, reagent composition and preparation method
Bashmakova et al. Development of the method to produce functionally active recombinant streptavidin in escherichia coli cells
CN111394323B (en) Recombinant RecA protein and expression method and application thereof
CN109402222B (en) High-throughput screening method for hydrolase
CN109266634B (en) Application of deinococcus radiodurans keratinase gene kerA
CN115161296A (en) Mutant of oplophorus elatus luciferase Nluc and application thereof
CN113151210B (en) Peroxidase mutant with high specific enzyme activity and application thereof
CN114634965B (en) High-throughput screening method of malonate transporter mutant library and application of mutants and 3-hydroxypropionic acid synthesis
CN118834846A (en) Efficient and stable firefly luciferase mutant and application thereof
Guimarães et al. Effect of carbon source on alkaline phosphatase production and excretion in Aspergillus caespitosus
KR20180007725A (en) Mass production method of beta agarase

Legal Events

Date Code Title Description
PB01 Publication
PB01 Publication
SE01 Entry into force of request for substantive examination
SE01 Entry into force of request for substantive examination