CN116964197A - Novel engineered and chimeric nucleases - Google Patents

Novel engineered and chimeric nucleases Download PDF

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CN116964197A
CN116964197A CN202280020679.3A CN202280020679A CN116964197A CN 116964197 A CN116964197 A CN 116964197A CN 202280020679 A CN202280020679 A CN 202280020679A CN 116964197 A CN116964197 A CN 116964197A
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leu
ala
glu
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布莱恩·C·托马斯
克利斯多佛·布朗
克里斯蒂娜·布特弗尔德
林俊良
亚伦·布鲁克斯
莫拉伊玛·M·特莫彻-迪亚兹
格雷格·科斯特
丽贝卡·拉莫特
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Macrogenomics
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Macrogenomics
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Priority claimed from PCT/US2022/013396 external-priority patent/WO2022159758A1/en
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Abstract

Disclosed herein are engineered nucleases and nuclease systems comprising chimeric nucleases and chimeric nuclease systems. The engineered and chimeric nucleases disclosed herein comprise nucleic acid guided nucleases. Further disclosed herein are methods of producing the engineered nucleases and methods of using the engineered nucleases.

Description

Novel engineered and chimeric nucleases
Cross reference to related applications
The present application relates to International application No. PCT/US2021/031136 entitled "enzyme with RUVC domain (ENZYMES WITH RUVC DOMAINS)" filed on month 5 and 6 of 2021 and PCT/US2020/018432 entitled "enzyme with RUVC domain (ENZYMES WITH RUVC DOMAINS)" filed on month 2 and 14 of 2020, each of which is incorporated herein by reference in its entirety.
The present application claims the benefit of U.S. provisional application No. 63/237,484 entitled "NOVEL engineered and chimeric NUCLEASES (NOVEL ENGINEERED AND CHIMERIC NUCLEASES)" filed on month 26 of 2021 and U.S. provisional application No. 63/140,620 entitled "NOVEL engineered and chimeric NUCLEASES (NOVEL ENGINEERED AND CHIMERIC NUCLEASES)" filed on month 22 of 2021, each of which is incorporated herein by reference in its entirety.
Background
Cas enzymes and their associated Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) guide ribonucleic acids (RNAs) appear to be a common component of the prokaryotic immune system (about 45% bacteria, about 84% archaebacteria) for protecting such microorganisms from non-self nucleic acids, such as infectious viruses and plasmids, by CRISPR-RNA-guided nucleic acid cleavage. While the deoxyribonucleic acid (DNA) element encoding the CRISPR RNA element may be relatively conserved in structure and length, its CRISPR-associated (Cas) protein is highly diverse, containing a variety of nucleic acid interaction domains. While CRISPR DNA elements were observed as early as 1987, the programmable endonuclease cleavage capability of CRISPR/Cas complexes was not until recently recognized, leading to the use of recombinant CRISPR/Cas systems in a variety of DNA manipulation and gene editing applications.
Disclosure of Invention
In some aspects, the present disclosure provides a fusion endonuclease comprising: (a) An N-terminal sequence comprising at least a portion of a RuvC domain, REC domain, or HNH domain of an endonuclease or variant thereof having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to SEQ ID NO 696; and (b) a C-terminal sequence comprising a WED, TOPO or CTD domain of an endonuclease or variant thereof having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any one of SEQ ID NOS: 697-721, wherein said N-terminal sequence and said C-terminal sequence are not naturally present together in the same reading frame. In some embodiments, the endonuclease is a type II, type II Cas endonuclease. In some embodiments, the endonuclease is a class II, V Cas endonuclease. In some embodiments, the N-terminal sequence and the C-terminal sequence are derived from different organisms. In some embodiments, the N-terminal sequence further comprises a RuvC-I, BH or RuvC-II domain. In some embodiments, the C-terminal sequence further comprises a PAM interaction domain. In some embodiments, the fusion endonuclease comprises a sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to any of SEQ ID NOS. In some embodiments, the fusion endonuclease is configured to bind to PAM (SEQ ID NO: 53) that is not nnRGGnT. In some embodiments, the fusion endonuclease is configured to bind to PAM comprising any of SEQ ID NOS: 46-52 or 54-66.
In some aspects, the disclosure provides an endonuclease comprising an engineered amino acid sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to any one of SEQ ID NOs 1-27 or 108, or a variant thereof.
In some aspects, the disclosure provides an endonuclease comprising an engineered amino acid sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to any one of SEQ ID NOs 109-110, or a variant thereof.
In some aspects, the present disclosure provides a nucleic acid comprising a sequence encoding any one of the endonucleases, fusion endonucleases, or Cas enzymes described herein. In some aspects, the sequence is codon optimized for expression in a host cell. In some embodiments, the host cell is prokaryotic, eukaryotic, mammalian, or human.
In some aspects, the present disclosure provides a vector comprising any of the nucleic acid sequences described herein.
In some aspects, the present disclosure provides a host cell comprising any one of the vectors, systems, or nucleic acids described herein. In some embodiments, the host cell is prokaryotic, eukaryotic, mammalian, or human.
In some aspects, the present disclosure provides an engineered nuclease system comprising: (a) Any of the nucleases, cas enzymes or fusion endonucleases described herein; and (b) an engineered guide ribonucleic acid structure configured to form a complex with the endonuclease, the engineered guide ribonucleic acid structure comprising: a guide ribonucleic acid configured to hybridize to a target deoxyribonucleic acid sequence; wherein the guide ribonucleic acid sequence is configured to bind to the endonuclease. In some embodiments, the guide ribonucleic acid further comprises a tracr ribonucleic acid sequence configured to bind to the endonuclease. In some embodiments, the endonuclease is derived from an uncultured microorganism. In some embodiments, the endonuclease is not a Cas9 endonuclease, a Cas14 endonuclease, a Cas12a endonuclease, a Cas12b endonuclease, a Cas12 c endonuclease, a Cas12d endonuclease, a Cas12e endonuclease, a Cas13a endonuclease, a Cas13b endonuclease, a Cas13c endonuclease, or a Cas13d endonuclease. In some embodiments, the endonuclease has less than 86% identity to a SpyCas9 endonuclease. In some embodiments, the system further comprises Mg 2+ Is a source of (a). In some embodiments, the endonuclease comprises any of SEQ ID NOs 8-12, 26-27 or 108What has at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity, or a variant thereof. In some embodiments, the guide ribonucleic acid sequence comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to a non-degenerate nucleotide of any one of SEQ ID NOs 33, 34, 44, 45, 78, 84 or 87.
In some aspects, the present disclosure provides an engineered nuclease comprising: (a) A class II, type II Cas enzyme RuvC and HNH domain, or a variant thereof, having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to the RuvC and HNH domain of any of SEQ ID NOs 1-27, 108 or 109-110; and (b) a class II, type II Cas enzyme PAM Interaction (PI) domain or variant thereof having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to the PAM Interaction (PI) domain of any one of SEQ ID NOs 1-27, 108, or 109-110. In some embodiments, (a) and (b) do not naturally occur together. In some embodiments, the class II, type II Cas enzyme is derived from an uncultured microorganism. In some embodiments, the endonuclease has less than 86% identity to a SpyCas9 endonuclease. In some embodiments, the engineered nuclease comprises a sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any one of SEQ ID NOs 1-27, or a variant thereof.
In some aspects, the present disclosure provides an engineered nuclease system comprising: (a) Any of the endonucleases described herein; and (b) an engineered guide ribonucleic acid structure configured to form a complex with the endonuclease, the engineered guide ribonucleic acid structure comprising: a guide ribonucleic acid sequence configured to hybridize to a target deoxyribonucleic acid sequence and configured to bind to the endonuclease. In some embodiments, the guide ribonucleic acid further comprises a tracr ribonucleic acid sequence configured to bind to the endonuclease. In some embodiments, the guide ribonucleic acid sequence comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to a non-degenerate nucleotide of any one of SEQ ID NOS 28-32 or 33-44, or a variant thereof. In some embodiments, the system further comprises a PAM sequence compatible with the nuclease adjacent to the target nucleic acid site. In some embodiments, the PAM sequence is located 3' to the target deoxyribonucleic acid sequence. In some embodiments, the PAM sequence is located 5' to the target deoxyribonucleic acid sequence. In some embodiments, the PAM sequence includes any of SEQ ID NOS 46-66.
In some aspects, the disclosure provides a method of targeting an albumin gene, the method comprising introducing into a cell any of the systems described herein, wherein the guide ribonucleic acid sequence is configured to hybridize to: a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any of SEQ ID NOs 67-86. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some aspects, the present disclosure provides a method of targeting a HAO1 gene or locus, the method comprising introducing into a cell any of the systems described herein, wherein the guide ribonucleic acid sequence is configured to hybridize to: a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any of SEQ ID NOs 611-633. In some embodiments, the guide ribonucleic acid sequence is configured to hybridize to: a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any of SEQ ID NOs 615, 618, 620, 624 or 626. In some embodiments, the guide ribonucleic acid comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any one of SEQ ID NOS 645-684. In some embodiments, the guide ribonucleic acid comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identity to any of SEQ ID NOS 645-649, 652-656, 660-671, 674-675, or 681-684, or a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identity to any of the targeting sequence of any of SEQ ID NOS 645-649, 652-656, 660-671, 674-675, or 681-684. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some embodiments, the present disclosure provides a method of disrupting a HAO-1 locus in a cell, the method comprising introducing into the cell: (a) Any of the endonucleases described herein; and (b) an engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the HAO-1 locus, wherein the engineered guide RNA is configured to hybridize to or comprises: a targeting sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to SEQ ID NO 611-626 or 627-633. In some embodiments, the endonuclease is a class 2, type II Cas endonuclease. In some embodiments, the class 2, type II Cas endonuclease comprises any one of the fusion or engineered endonucleases described herein. In some embodiments, the endonuclease includes any of the fusion or engineered endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease comprises a sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identity to SEQ ID No. 10, or a variant thereof. In some embodiments, the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to a non-degenerate nucleotide of SEQ ID NO 722. In some embodiments, the engineered guide RNA comprises a sequence that has at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to any of SEQ ID NOS 618, 620, 624, or 626, or a sequence that has at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to a targeting sequence of any of SEQ ID NOS 618, 620, 624, or 626. In some embodiments, the engineered guide RNAs comprise the nucleotide sequences of any one of the guide RNAs of table 9 or table 12. In some embodiments, the cell is a mammalian cell. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some aspects, the present disclosure provides a method of disrupting a TRAC locus in a cell, the method comprising introducing into the cell: (a) Any of the endonucleases described herein; and (b) an engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the TRAC locus, wherein the engineered guide RNA is configured to hybridize to or comprise: a targeting sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to SEQ ID NOs 139-158; or wherein the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to any of SEQ ID NOs 119-138. In some embodiments, the endonuclease is a class 2, type II Cas endonuclease. In some embodiments, the class 2, type II Cas endonuclease comprises any one of the fusion or engineered endonucleases described herein. In some embodiments, the endonuclease includes any of the fusion or engineered endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease includes any of the fusion endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease comprises the fusion endonuclease having at least 55% identity to SEQ ID No. 10 or a variant thereof. In some embodiments, the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to a non-degenerate nucleotide of SEQ ID NO 722. In some embodiments, the engineered guide RNA comprises a sequence that is at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identical to any of SEQ ID NOS 121, 132, 136, 130, 134, 135, or 137 or a sequence that is at least 80% identical to a targeting sequence of any of SEQ ID NOS 121, 132, 136, 130, 134, 135, or 137. In some embodiments, the engineered guide RNAs comprise the nucleotide sequences of any one of the guide RNAs of table 7A. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some embodiments, the disclosure provides a method of disrupting a B2M locus in a cell, the method comprising introducing into the cell: (a) Any of the endonucleases described herein; and (B) an engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the B2M locus, wherein the engineered guide RNA is configured to hybridize to or comprise: a targeting sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to SEQ ID nos. 185-210; or wherein the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to any of SEQ ID NOs 159-184. In some embodiments, the endonuclease is a class 2, type II Cas endonuclease. In some embodiments, the class 2, type II Cas endonuclease comprises any one of the fusion or engineered endonucleases described herein. In some embodiments, the endonuclease includes any of the fusion or engineered endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease includes any of the fusion endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease comprises a fusion endonuclease comprising a sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to SEQ ID No. 10, or a variant thereof. In some embodiments, the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to a non-degenerate nucleotide of SEQ ID NO 722. In some embodiments, the engineered guide RNA comprises a sequence that is at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identical to any of SEQ ID NOS 159, 165, 168, 174, or 184, or a sequence that is at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identical to a targeting sequence of any of SEQ ID NOS 159, 165, 168, 174, or 184. In some embodiments, the engineered guide RNAs comprise the nucleotide sequences of any one of the guide RNAs of table 7B. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some aspects, the disclosure provides a method of disrupting a TRBC1 locus in a cell, the method comprising introducing into the cell: (a) Any of the endonucleases described herein; and (b) an engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the TRBC1 locus, wherein the engineered guide RNA is configured to hybridize to or comprises: a targeting sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to SEQ ID nos. 252-292; or wherein the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to any one of SEQ ID NOs 211-251. In some embodiments, the endonuclease is a class 2, type II Cas endonuclease. In some embodiments, the class 2, type II Cas endonuclease comprises any one of the fusion or engineered endonucleases described herein. In some embodiments, the endonuclease includes any of the fusion or engineered endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease includes any of the fusion endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease comprises a fusion endonuclease comprising a sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to SEQ ID No. 10, or a variant thereof. In some embodiments, the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to a non-degenerate nucleotide of SEQ ID NO 722. In some embodiments, the engineered guide RNA is a targeting sequence comprising a sequence having at least 80% identity to any one of SEQ ID NOS: 211, 212, 215, 241, or 242 or comprising a targeting sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identity to any one of SEQ ID NOS: 211, 212, 215, 241, or 242. In some embodiments, the engineered guide RNAs comprise the nucleotide sequences of any one of the guide RNAs of table 7C. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some aspects, the disclosure provides a method of disrupting a TRBC2 locus in a cell, the method comprising introducing into the cell: (a) Any of the endonucleases described herein; and (b) an engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the TRBC2 locus, wherein the engineered guide RNA is configured to hybridize to or comprises: a targeting sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to SEQ ID NOs 338-382; or wherein the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to any of SEQ ID NOs 293-337. In some embodiments, the endonuclease is a class 2, type II Cas endonuclease. In some embodiments, the class 2, type II Cas endonuclease comprises any one of the fusion or engineered endonucleases described herein. In some embodiments, the endonuclease includes any of the fusion or engineered endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease is any of the fusion endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease comprises a fusion endonuclease comprising a sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to SEQ ID No. 10, or a variant thereof. In some embodiments, the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to a non-degenerate nucleotide of SEQ ID NO 722. In some embodiments, the engineered guide RNA comprises a sequence that is at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identical to any of SEQ ID NOS 296, 306, or 332 or comprises a targeting sequence that is at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identical to a targeting sequence of any of SEQ ID NOS 296, 306, or 332. In some embodiments, the engineered guide RNAs comprise the nucleotide sequences of any one of the guide RNAs of table 7C. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some aspects, the present disclosure provides a method of disrupting an ANGPTL3 locus in a cell, the method comprising introducing into the cell: (a) Any of the endonucleases described herein; and (b) an engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the ANGPTL3 locus, wherein the engineered guide RNA is configured to hybridize to or comprises: a targeting sequence having at least 80% identity to SEQ ID NOS 478-572; or wherein the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to any one of SEQ ID nos. 383-477. In some embodiments, the endonuclease is a class 2, type II Cas endonuclease. In some embodiments, the class 2, type II Cas endonuclease comprises any one of the fusion or engineered endonucleases described herein. In some embodiments, the endonuclease includes any of the fusion or engineered endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease includes any of the fusion endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease comprises a fusion endonuclease having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identity to SEQ ID No. 10, or a variant thereof. In some embodiments, the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to a non-degenerate nucleotide of SEQ ID NO 722. In some embodiments, the engineered guide RNA comprises a sequence that is at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identical to any of SEQ ID NOs 419, 425, 431, 439, 447, 453, 461, 467, 471, or 473, or a sequence that is at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identical to any of SEQ ID NOs. In some embodiments, the engineered guide RNAs comprise the nucleotide sequences of any one of the guide RNAs of table 7D. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some aspects, the disclosure provides a method of disrupting a PCSK9 locus in a cell, the method comprising introducing into the cell: (a) Any of the endonucleases described herein; and (b) an engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the PCSK9 locus, wherein the engineered guide RNA is configured to hybridize to or comprise: a targeting sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to SEQ ID No. 588-602; or wherein the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to any of SEQ ID NOs 573-587. In some embodiments, the endonuclease is a class 2, type II Cas endonuclease. In some embodiments, the class 2, type II Cas endonuclease comprises any one of the fusion or engineered endonucleases described herein. In some embodiments, the endonuclease includes any of the fusion or engineered endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease includes any of the fusion endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease comprises a fusion endonuclease comprising a sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to SEQ ID No. 10, or a variant thereof. In some embodiments, the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to a non-degenerate nucleotide of SEQ ID NO 722. In some embodiments, the engineered guide comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identity to any of SEQ ID NOs 574, 578, 581, or 585. In some embodiments, the engineered guide RNAs comprise the nucleotide sequences of any one of the guide RNAs of table 7E. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some embodiments, the present disclosure provides a method of disrupting an albumin locus in a cell, the method comprising introducing into the cell: (a) Any of the endonucleases described herein; and (b) an engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the albumin locus, wherein the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identity to any of SEQ ID NOs 67-86 or 646-695; or wherein the engineered guide RNA comprises a targeting sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to the targeting sequence of any one of SEQ ID NOs 67-86 or 646-695. In some embodiments, the endonuclease is a class 2, type II Cas endonuclease. In some embodiments, the class 2, type II Cas endonuclease comprises any one of the fusion or engineered endonucleases described herein. In some embodiments, the endonuclease includes any of the fusion or engineered endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease comprises any of the type II Cas endonucleases described herein. In some embodiments, the class 2, type II Cas endonuclease comprises a fusion endonuclease having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% identity to SEQ ID No. 10, or a variant thereof. In some embodiments, the engineered guide RNA comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to a non-degenerate nucleotide of SEQ ID NO 722. In some embodiments, the engineered guide RNA comprises or is complementary to a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identity to any of SEQ ID NOs 67, 68, 70, 71, 72, 76, 79, 80, 647, 648, 649, 653, 654, 655, 656, 673, 680, 681 or 682. In some embodiments, the engineered guide RNAs comprise the nucleotide sequences of any one of the guide RNAs of table 6. In some embodiments, introducing into the cell further comprises contacting the cell with a nucleic acid or vector encoding the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the vector or nucleic acid. In some embodiments, introducing into the cell further comprises contacting the cell with a ribonucleoprotein complex (RNP) comprising the fusion protein or the guide-polynucleotide or comprises contacting the cell with a Lipid Nanoparticle (LNP) comprising the RNP.
In some aspects, the present disclosure provides an endonuclease comprising an engineered amino acid sequence having at least 55% sequence identity to any one of SEQ ID NOS: 1-27, 108 or 109-110, or a variant thereof.
In some aspects, the present disclosure provides an engineered nuclease system comprising: endonucleases described herein; and an engineered guide ribonucleic acid structure configured to form a complex with the endonuclease, the engineered guide ribonucleic acid structure comprising: a guide ribonucleic acid sequence configured to hybridize to a target deoxyribonucleic acid sequence; and a tracr ribonucleic acid sequence configured to bind to the endonuclease. In some embodiments, the endonuclease is derived from an uncultured microorganism. In some embodiments, the endonuclease is not a Cas9 endonuclease,Cas14 endonuclease, cas12a endonuclease, cas12b endonuclease, cas12 c endonuclease, cas12d endonuclease, cas12e endonuclease, cas13a endonuclease, cas13b endonuclease, cas13c endonuclease, or Cas13d endonuclease. In some embodiments, the endonuclease has less than 86% identity to the SpyCas9 endonuclease. In some embodiments, the system further comprises an MG 2+ Is a source of (a).
In some aspects, the present disclosure provides an engineered nuclease comprising: (a) A class II, type II Cas enzyme RuvC and HNH domain, or variants thereof, having at least 55% sequence identity to the RuvC and HNH domain of any one of SEQ ID NOs 1-27, 108 or 109-110; and (b) a class II, type II Cas enzyme PAM Interaction (PI) domain or variant thereof, the class II, type II Cas enzyme PI domain having at least 55% sequence identity to a PAM Interaction (PI) domain of any one of SEQ ID NOs 1-27, 108 or 109-110. In some embodiments, (a) and (b) do not naturally occur together. In some embodiments, the class II, type II Cas enzyme is derived from an uncultured microorganism. In some embodiments, the endonuclease has less than 86% identity to the SpyCas9 endonuclease. In some embodiments, the engineered nuclease comprises a sequence having at least 55% sequence identity to any one of SEQ ID NOs 1-27.
In some aspects, the present disclosure provides an engineered nuclease system comprising: an endonuclease according to any of the aspects or embodiments described herein; and an engineered guide ribonucleic acid structure configured to form a complex with the endonuclease, the engineered guide ribonucleic acid structure comprising: a guide ribonucleic acid sequence configured to hybridize to a target deoxyribonucleic acid sequence; and a tracr ribonucleic acid sequence configured to bind to the endonuclease. In some embodiments, the guide ribonucleic acid sequence comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of any one of SEQ ID NOS.28-32 or 33-44, or a variant thereof. In some embodiments, the system further comprises a PAM sequence compatible with the nuclease adjacent to the target nucleic acid site. In some embodiments, the PAM sequence is located 3' to the target deoxyribonucleic acid sequence. In some embodiments, the PAM sequence includes any of SEQ ID NOS 46-66.
In some embodiments, the present disclosure provides an engineered single molecule heterologous guide-polynucleotide that is compatible with a class II, class II enzyme according to any of the aspects or embodiments described herein, wherein the heterologous guide-polynucleotide comprises a chemical modification according to any of SEQ ID NOs 645-684.
In some aspects, the present disclosure provides a method of targeting an albumin gene, the method comprising introducing into a cell a system according to any one of the aspects or embodiments described herein, wherein the guide ribonucleic acid sequence is configured to hybridize to a sequence comprising any one of SEQ ID NOs 67-86.
In some aspects, the present disclosure provides a method of targeting a HAO1 gene, the method comprising introducing into a cell a system according to any of the aspects or embodiments described herein, wherein the guide ribonucleic acid sequence is configured to hybridize to any of SEQ ID NOs 611-633. In some embodiments, the guide ribonucleic acid sequence is configured to hybridize to any of SEQ ID NOs 615, 618, 620, 624, or 626. In some embodiments, the guide ribonucleic acid comprises a sequence according to any one of SEQ ID NOS: 645-684. In some embodiments, the guide ribonucleic acid comprises a sequence according to any one of SEQ ID NOS 645-649, 652-656, 660-671, 674-675, or 681-684.
In some aspects, the present disclosure provides cells comprising an endonuclease described herein. In some aspects, the present disclosure provides a cell comprising any of the nucleic acid molecules described herein. In some aspects, the present disclosure provides cells comprising the engineered nuclease systems described herein.
Additional aspects and advantages of the present disclosure will become apparent to those skilled in the art from the following detailed description, wherein only illustrative embodiments of the present disclosure are shown and described. As will be realized, the present disclosure is capable of other different embodiments and its several details are capable of modification in various obvious respects, all without departing from the present disclosure. Accordingly, the drawings and description are to be regarded as illustrative in nature and not as restrictive.
Incorporated by reference
All publications, patents, and patent applications mentioned in this specification are herein incorporated by reference to the same extent as if each individual publication, patent, or patent application was specifically and individually indicated to be incorporated by reference.
Drawings
The novel features of the invention are set forth with particularity in the appended claims. A better understanding of the features and advantages of the present invention will be obtained by reference to the following detailed description that sets forth illustrative embodiments, in which the principles of the invention are utilized, and the accompanying drawings (also referred to herein as "Figure/fig") ":
FIGS. 1A-1B depict the natural PAM specificity of the various effectors described herein. FIG. 1A shows a phylogenetic tree of the various effectors described herein. Fig. 1B is a PAM-specific table of natural RNA guided CRISPR-associated endonucleases.
Figure 2 illustrates the concept of domain exchange between RNA-guided CRISPR-associated nucleases.
Figures 3A and 3B depict an alignment of multiple sequences to guide the determination of the optimal breakpoint. Fig. 3A shows SaCas9 and SpCas9 aligned with several proteins described herein, and the terminal conserved residues (alanine residues) of these sequences were identified as the proposed C-terminal of the exchange segment. FIG. 3B depicts the C-terminal domain of the SaCas9 protein as the exchange span of the RuvC-III, WED, TOPO and CTD domains. PAM interactive domains consist of TOPO domains and CTD domains. The exchanged C-terminal domain does not contain active site residues (D10, E477 and H701 of RuvC domain and D556, D557 and N580 of NHN domain).
FIG. 4 depicts screening of chimeras by in vitro PAM enrichment assays when MG3-6 was recombined with various C-terminal domains from closely and remotely related nucleases. Sgrnas from the N-terminal parent domain are used for RNA-guided nuclease activity.
Fig. 5A-5B depict PAM sequences (fig. 5A) and Seq Logo depictions (fig. 5B) of PAM sequences of functional chimeras described herein. Given the breakpoint exchange of the predicted C-terminal domain of RuvC-III, WED, TOPO and CTD, the chimera is functional if recombined with a closely related nuclease. Even if the native protein is not functional in the same experiment, engineered chimeras tend to retain PAM specificity of the PAM interaction domain of the native protein.
FIG. 6 shows screening of chimeras by in vitro PAM enrichment assays in cases where the chimeras recombine MG3-6 with various c-terminal domains from closely and remotely related nucleases. Sgrnas from the C-terminal parent domain are used for RNA-guided nuclease activity. The numbers in brackets indicate sgRNA species. There was no rescue activity using sgrnas from the C-terminal parental domain.
FIG. 7 shows predicted structures of MG3-6 and MG 15-1. The WED and PI domains of MG3-6 were exchanged with the domains of the MG15-1 counterpart to generate chimera 1 (C1). Alternatively, the PI domain of MG3-6 is exchanged with the counterpart of MG15-1 to generate chimera 2 (C2).
Fig. 8A-8B depict PAM enrichment assay and sanger sequencing (Sanger sequencing) results in vitro for PAM specificity. C1: MG3-6+MG15-1 (WP) and C2: MG3-6+MG15-1 (P). Engineered chimeras tend to retain PAM specificity of the PAM interaction domain of the native protein. PAM enrichment assays were performed in triplicate. (FIG. 8A) shows an agarose gel description of an assay indicating that the sequence was cleaved in the presence of active enzyme, and (FIG. 8B) shows a Seqlogo description of the PAM sequence determined by the assay.
Figures 9A-9B depict the activity of the chimeras described herein in mammalian cells. mRNA encoding the chimera was co-transfected with 20 different sgRNAs (see, e.g., SEQ ID No: 67-86) into Hepa1-6 cells. Editing was assessed by sanger sequencing and CRISPR editing Inference (ICE). Fig. 9A shows the editing efficiency of the tested wizard. Two biological replicates are shown. FIG. 9B shows an insertion and deletion (indel) curve created by a representative wizard.
FIG. 10 depicts the results of guide screening in Hepa1-6 cells; the guide was delivered as mRNA and gRNA using lipofectamine Messenger Max.
FIG. 11A depicts structural parts of the MG3-6/3-4 guide. FIG. 11B depicts structural portions of the MG3-6 guide.
FIG. 12 depicts the activity of chemically modified MG3-6/3-4 guides in Hepa1-6 cells when using lipofectamine Messenger Max as mRNA and gRNA delivery.
FIG. 13 depicts the stability of the chemically modified MG3-6/3-4 guide at 37℃over 9 hours.
FIG. 14 depicts the stability of the chemically modified MG3-6/3-4 guide at 37℃over 21 hours.
FIGS. 15A-15B depict in vitro screening of V-A type chimeras. FIG. 15A depicts agarose gels of amplified cleavage products of each cleavage reaction. Positive enrichment was observed by the MG29-1+MG29-5 chimera, domain switching from the same family (numbers in brackets indicate sgRNA species). Fig. 15B depicts Seqlogo descriptions for PAM of parent enzyme and chimeras derived therefrom.
FIG. 16 depicts the results of gene editing of TRAC at the DNA level in HEK293T cells.
FIG. 17 depicts the results of gene editing of B2M at the DNA level in HEK293T cells.
FIG. 18 depicts the results of gene editing of TRAC at the DNA and phenotype level in T cells.
FIG. 19 depicts the results of gene editing of B2M at the DNA level in T cells.
FIG. 20 depicts gene editing results of TRBC1 and TRBC2 at the phenotypic level in T cells.
FIG. 21 depicts the results of gene editing of ANGPTL3 at the DNA level in Hep3B cells.
FIG. 22 depicts gene editing results of PCSK9 at the DNA level in Hep3B cells.
FIG. 23 depicts genome editing of MG3-6/3-4 at the HAO-1 locus in wild-type mice analyzed by next generation sequencing.
FIG. 24 depicts glycolate oxidase protein levels in the liver of mice treated with MG3-6/3-4mRNA and guide RNA targeting the HAO-1 gene.
FIG. 25 depicts genome editing at the HAO-1 locus in wild type mice treated with MG3-6/3-4mRNA and guide RNA 7 (G7) with 4 different chemical modifications that target HAO-1.
FIG. 26 depicts Western blot analysis of Glycolate Oxidase (GO) protein levels in the liver of 11 th day mice after treatment with LNP encapsulating MG3-6/3-4mRNA and sgRNA 7 (G7) with 4 different chemical modifications.
Brief description of the sequence Listing
The sequence listing filed herewith provides example polynucleotide and polypeptide sequences for use in methods, compositions and systems according to the present disclosure. The following is an example description of sequences therein.
MG3-6 chimera
SEQ ID NOS.1-27 show the full-length peptide sequences of MG3-6 chimeric nucleases.
SEQ ID NO. 108 shows the nucleotide sequence of an MG3-6/3-4 nuclease comprising a 5'UTR, NLS, CDS, NLS, 3' UTR and a polyA tail.
SEQ ID NOS.28-45 and 605-610 show the nucleotide sequences of sgRNAs engineered to function with MG3-6 chimeric nucleases.
SEQ ID NOS.46-59 show the natural PAM specificity of the various effectors.
SEQ ID NOS.60-66 show the PAM specificity of the chimeric nucleases described herein.
SEQ ID NO. 603 shows the DNA coding sequence of MG 3-6/3-4.
SEQ ID NO. 604 shows the protein sequence of the MG3-6/3-4 cassette coding sequence.
MG29-1 chimera
SEQ ID NOS.109-110 show the full-length peptide sequences of MG29-1 chimeric nucleases.
SEQ ID NOS.111-113 show the nucleotide sequences of sgRNAs engineered to function with MG29-1 chimeric nucleases.
SEQ ID NOS.114-116 show the natural PAM specificity of the various effectors.
SEQ ID NO 117 shows the PAM specificity of the chimeric nucleases described herein.
TRAC targeting
SEQ ID NOS.119-138 shows the nucleotide sequences of sgRNAs engineered to function with MG3-6/3-4 nucleases to target TRAC.
SEQ ID NOS 139-158 shows the DNA sequence of the TRAC target site.
B2M targeting
SEQ ID NOS.159-184 shows the nucleotide sequences engineered to function with MG3-6/3-4 nucleases in order to target the sgRNA of B2M.
The DNA sequence of the B2M target site is shown in SEQ ID NOS.185-210.
TRBC1 targeting
SEQ ID NOS.211-251 shows the nucleotide sequences of sgRNAs engineered to function with MG3-6/3-4 nucleases in order to target TRBC 1.
SEQ ID NOS.252-292 shows the DNA sequence of the TRBC1 target site.
TRBC2 targeting
SEQ ID NOS.293-337 shows the nucleotide sequences of sgRNAs engineered to function with MG3-6/3-4 nucleases in order to target TRBC 2.
SEQ ID NOS.338-382 shows the DNA sequence of the TRBC2 target site.
ANGPTL3 targeting
SEQ ID NOS: 383-477 shows the nucleotide sequence of an sgRNA engineered to function with MG3-6/3-4 nuclease in order to target ANGPTL 3.
SEQ ID NOS 478-572 shows the DNA sequence of the target site of ANGPTL 3.
PCSK9 targeting
SEQ ID NO 573-587 shows the nucleotide sequence of an sgRNA engineered to function with MG3-6/3-4 nuclease to target PCSK 9.
SEQ ID NO. 588-602 shows the DNA sequence of the PCSK9 target site.
Detailed Description
While various embodiments of the present invention have been shown and described herein, it will be obvious to those skilled in the art that such embodiments are provided by way of example only. Numerous variations, changes, and substitutions will now occur to those skilled in the art without departing from the invention. It should be understood that various alternatives to the embodiments of the invention described herein may be employed.
Practice of some of the methods disclosed herein employs techniques of immunology, biochemistry, chemistry, molecular biology, microbiology, cell biology, genomics, and recombinant DNA unless otherwise indicated. See, e.g., sambrook and Green et al, molecular cloning: laboratory Manual (Molecular Cloning: A Laboratory Manual), 4 th edition (2012); cluster books "current guidelines for molecular biology experiments (Current Protocols in Molecular Biology) (edited by F.M. Ausubel et al); books "methods of enzymology (Methods In Enzymology) (Academic Press, inc.)," PCR 2: practical methods (PCR 2:A Practical Approach) (M.J.MacPherson, B.D.Hames and G.R.Taylor edition (1995)), harlow and Lane edition (1988) antibodies: laboratory manuals (Antibodies, A Laboratory Manual), animal cell culture: basic technology and specialty applications Manual (Culture of Animal Cells: A Manual of Basic Technique and Specialized Applications), 6 th edition (R.I. Freshney edit (2010)), which is incorporated herein by reference in its entirety.
As used herein, the singular forms "a," "an," and "the" are intended to include the plural forms as well, unless the context clearly indicates otherwise. Furthermore, where the term "include" or "having" or variations thereof is used in the detailed description or claims, such term is intended to be inclusive in a manner similar to the term "comprising".
The term "about" or "approximately" means within an acceptable error range for a particular value as determined by one of ordinary skill in the art, which will depend in part on how the value is measured or determined, e.g., limitations of the measurement system. For example, "about" may mean within one or more than one standard deviation in accordance with the practice in the art. Alternatively, "about" may mean a range of up to 20%, up to 15%, up to 10%, up to 5%, or up to 1% of a given value.
As used herein, "cell" generally refers to a biological cell. The cell may be the basic structure, function or biological unit of a living organism. The cells may be derived from any organism having one or more cells. Some non-limiting examples include: prokaryotic cells, eukaryotic cells, bacterial cells, archaebacterial cells, cells of single cell eukaryotes, protozoa cells, cells from plants (e.g., from planted crops, fruits, vegetables, grains, soybeans, corn, maize, wheat, seeds, tomatoes, rice, tapioca, sugarcane, pumpkin, hay, potatoes, cotton, hemp, tobacco, flowering plants, conifers, gymnosperms, ferns, lycopodium, goldfish algae, liverwort, moss cells), algae cells (e.g., botrytis cinerea (Botryococcus braunii), chlamydomonas reinharderia (Chlamydomonas reinhardtii), pseudomicroalga (Nannochloropsis gaditana), pyrenoidosa (Chlorella pyrenoidosa), c.agardh b. Horsetail algae (Sargassum c.agardh), etc.), algae (e.g., kelp), fungal cells (e.g., yeast cells, cells from mushrooms), animal cells, cells from invertebrates (e.g., fruit, spinosa, echinoderm, nematodes, etc.), cells from animals (e.g., fish, amphibians, reptiles, birds, rodents, animals (e.g., rats, mice, rats, etc.), non-human animals, rats, etc.). Sometimes, the cells are not derived from a natural organism (e.g., the cells may be synthetically manufactured, sometimes referred to as artificial cells).
As used herein, the term "nucleotide" generally refers to a base-sugar-phosphate combination. Nucleotides may include synthetic nucleotides. Nucleotides may include synthetic nucleotide analogs. Nucleotides may be monomeric units of nucleic acid sequences such as deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). The term nucleotide may comprise ribonucleoside triphosphates, adenosine Triphosphate (ATP), uridine Triphosphate (UTP), cytosine Triphosphate (CTP), guanosine Triphosphate (GTP) and deoxyribonucleoside triphosphates such as dATP, dCTP, dITP, dUTP, dGTP, dTTP or derivatives thereof. Such derivatives may comprise, for example, [ αS ] dATP, 7-deaza-dGTP and 7-deaza-dATP, as well as nucleotide derivatives which confer nuclease resistance to the nucleic acid molecules containing them. The term nucleotide as used herein may refer to dideoxyribonucleoside triphosphates (ddntps) and derivatives thereof. Illustrative examples of dideoxyribonucleoside triphosphates can include, but are not limited to: ddATP, ddCTP, ddGTP, ddITP and ddTTP. The nucleotides may be unlabeled or detectably labeled, such as with a moiety comprising an optically detectable moiety (e.g., a fluorophore). The marks may also be made with quantum dots. The detectable label may comprise, for example, a radioisotope, a fluorescent label, a chemiluminescent label, a bioluminescent label, and an enzymatic label. Fluorescent labels for nucleotides may include, but are not limited to, fluorescein, 5-carboxyfluorescein (FAM), 2'7' -dimethoxy-4 '5-dichloro-6-carboxyfluorescein (JOE), rhodamine, 6-carboxyrhodamine (R6G), N' -tetramethyl-6-carboxyrhodamine (TAMRA), 6-carboxy-X-Rhodamine (ROX), 4- (4 'dimethylaminophenylazo) benzoic acid (DABCYL), waterfall blue, oregon green, texas red, cyan, and 5- (2' -aminoethyl) aminonaphthalene-1-sulfonic acid (EDANS). Specific examples of the fluorescent-labeled nucleotide may include [ R6G ] dUTP, [ TAMRA ] dUTP, [ R110] dCTP, [ R6G ] dCTP, [ TAMRA ] dCTP, [ JOE ] ddATP, [ R6G ] ddATP, [ FAM ] ddCTP, [ R110] ddCTP, [ TAMRA ] ddGTP, [ ROX ] ddTTP, [ dR6G ] ddATP, [ dR110] ddCTP, [ dAMRA ] ddGTP and [ dROX ] ddTTP, which are available from platinum Alzheimer's company (Perkin Elmer, foster City, calif.); fluoLink deoxynucleotides, fluoLink Cy3-dCTP, fluoLink Cy5-dCTP, fluoroLink Fluor X-dCTP, fluoLink Cy3-dUTP and FluoLink Cy5-dUTP available from Amersham, arlington Heights, ill.) in Allington, ill; fluorescein-15-dATP, fluorescein-12-dUTP, tetramethyl-rhodamine-6-dUTP, IR770-9-dATP, fluorescein-12-ddUTP, fluorescein-12-UTP, and fluorescein-15-2' -dATP, available from Boehringer Mannheim company (Boehringer Mannheim, indianapolis, ind.) of Indianapolis; and chromosome-labeled nucleotides available from Molecular Probes, eugenia, oreg, BODIPY-FL-14-UTP, BODIPY-FL-4-UTP, BODIPY-TMR-14-dUTP, BODIPY-TR-14-UTP, BODIPY-TR-14-dUTP, waterfall blue-7-UTP, waterfall blue-7-dUTP, fluorescein-12-UTP, fluorescein-12-dUTP, oreg green 488-5-dUTP, rhodamine green-5-dUTP, tetramethylrhodamine-6-UTP, tetramethylrhodamine-6-dUTP, texas red-5-UTP, texas red-5-dUTP, and Texas red-12-dUTP. Nucleotides may also be labeled or tagged by chemical modification. The chemically modified mononucleotide may be biotin-dNTP. Some non-limiting examples of biotinylated dNTPs may comprise biotin-dATP (e.g., bio-N6-ddATP, biotin-14-dATP), biotin-dCTP (e.g., biotin-11-dCTP, biotin-14-dCTP), and biotin-dUTP (e.g., biotin-11-dUTP, biotin-16-dUTP, biotin-20-dUTP).
The terms "polynucleotide," "oligonucleotide," and "nucleic acid" are used interchangeably to refer generally to a polymeric form of nucleotides of any length, either deoxyribonucleotides or ribonucleotides or analogs thereof, in single-stranded, double-stranded or multi-stranded form. Polynucleotides may be exogenous or endogenous to the cell. The polynucleotide may be present in a cell-free environment. The polynucleotide may be a gene or fragment thereof. The polynucleotide may be DNA. The polynucleotide may be RNA. The polynucleotide may have any three-dimensional structure and may perform any function. Polynucleotides may include one or more analogs (e.g., altered backbones, sugars, or nucleobases). Modification of the nucleotide structure, if present, may be imparted either before or after assembly of the polymer. Some non-limiting examples of analogs include: 5-bromouracil, peptide nucleic acids, heterologous nucleic acids, morpholino, locked nucleic acids, glycerol nucleic acids, threose nucleic acids, dideoxynucleotides, cordycepin, 7-deaza-GTP, fluorophores (e.g., rhodamine or fluorescein linked to sugars), thiol-containing nucleotides, biotin-linked nucleotides, fluorescent base analogues, cpG islands, methyl-7-guanosine, methylated nucleotides, inosine, thiouridine, pseudouridine, dihydrouridine, plait-glycosides and Russian glycosides. Non-limiting examples of polynucleotides include coding or non-coding regions of a gene or gene fragment, multiple loci (one locus), exons, introns, messenger RNAs (mRNA), transfer RNAs (tRNA), ribosomal RNAs (rRNA), short interfering RNAs (siRNA), short hairpin RNAs (shRNA), micrornas (miRNA), ribozymes, cDNA, recombinant polynucleotides, branched polynucleotides, plasmids, vectors, isolated DNA of any sequence, isolated RNA of any sequence, cell-free polynucleotides comprising cell-free DNA (cfDNA) and cell-free RNA (cfRNA), nucleic acid probes and primers defined according to ligation assays. The nucleotide sequence may be interspersed with non-nucleotide components.
The term "transfection" or "transfected" generally refers to the introduction of a nucleic acid into a cell by a non-viral or viral-based method. The nucleic acid molecule may be a gene sequence encoding the whole protein or a functional part thereof. See, e.g., sambrook et al (1989), molecular cloning: laboratory Manual, 18.1-18.88.
The terms "peptide," "polypeptide," and "protein" are used interchangeably herein to generally refer to a polymer of at least two amino acid residues joined by peptide bonds. This term does not denote a specific length of the polymer nor is it intended to suggest or distinguish whether the peptide was produced using recombinant techniques, chemical or enzymatic synthesis or naturally occurring. The term applies to naturally occurring amino acid polymers and amino acid polymers comprising at least one modified amino acid. In some cases, the polymer may be interspersed with non-amino acids. The term encompasses amino acid chains of any length, including full-length proteins as well as proteins with or without secondary or tertiary structures (e.g., domains). The term also encompasses amino acid polymers that have been modified; for example by disulfide bond formation, glycosylation, lipidation, acetylation, phosphorylation, oxidation and any other manipulation, such as conjugation with a labeling component. As used herein, the terms "amino acids" and "amino acids" generally refer to natural and unnatural amino acids, including, but not limited to, modified amino acids and amino acid analogs. The modified amino acids may comprise natural amino acids and unnatural amino acids that have been chemically modified to comprise groups or chemical moieties that do not naturally occur on the amino acid. Amino acid analogs may refer to amino acid derivatives. The term "amino acid" encompasses D-amino acids and L-amino acids.
As used herein, "non-native" may generally refer to a nucleic acid or polypeptide sequence that is not found in a native nucleic acid or protein. Non-natural may refer to an affinity tag. Non-natural may refer to fusion. Non-naturally may refer to naturally occurring nucleic acid or polypeptide sequences that include mutations, insertions, or deletions. The non-native sequence may exhibit or encode an activity (e.g., enzymatic activity, methyltransferase activity, acetyltransferase activity, kinase activity, ubiquitination activity, etc.) that may also be exhibited by a nucleic acid or polypeptide sequence fused to the non-native sequence. The non-native nucleic acid or polypeptide sequence may be joined to a naturally occurring nucleic acid or polypeptide sequence (or variant thereof) by genetic engineering to produce a chimeric nucleic acid or polypeptide sequence encoding a chimeric nucleic acid or polypeptide.
As used herein, the term "promoter" generally refers to a regulatory DNA region that controls transcription or expression of a gene and may be located adjacent to or overlapping with a nucleotide or nucleotide region that initiates transcription of RNA. Promoters may contain specific DNA sequences that bind protein factors (commonly referred to as transcription factors) that promote binding of RNA polymerase to DNA, thereby resulting in transcription of the gene. A 'base promoter', also referred to as a 'core promoter', may generally refer to a promoter that contains all the essential elements that promote transcriptional expression of an operably linked polynucleotide. In some cases, the eukaryotic basal promoter comprises a TATA box or CAAT box.
As used herein, the term "expression" generally refers to the process of transcribing a nucleic acid sequence or polynucleotide (e.g., into mRNA or other RNA transcript) from a DNA template or the subsequent translation of the transcribed mRNA into a peptide, polypeptide, or protein. Transcripts and encoded polypeptides may be collectively referred to as "gene products". If the polynucleotide is derived from genomic DNA, expression may comprise splicing of mRNA in eukaryotic cells.
As used herein, "operably linked," "operably linked," or grammatical equivalents thereof generally refers to the juxtaposition of genetic elements, such as promoters, enhancers, polyadenylation sequences, and the like, wherein the elements are in a relationship permitting them to operate in a desired manner. For example, a regulatory element, which may include a promoter or enhancer sequence, is operably linked to a coding region if the regulatory element helps to initiate transcription of the coding sequence. As long as this functional relationship is maintained, insertion residues will exist between the regulatory element and the coding region.
As used herein, "vector" generally refers to a macromolecule or association of macromolecules that includes or is associated with a polynucleotide and that can be used to mediate delivery of the polynucleotide to a cell. Examples of vectors include plasmids, viral vectors, liposomes, and other gene delivery vehicles. Vectors typically include genetic elements, such as regulatory elements, operably linked to a gene to facilitate expression of the gene in a target.
As used herein, an "expression cassette" and a "nucleic acid cassette" are generally used interchangeably to refer to a combination of nucleic acid sequences or elements that are expressed together or operably linked for expression. In some cases, an expression cassette refers to a combination of a regulatory element and one or more genes that are operably linked for expression.
"functional fragment" of a DNA or protein sequence generally refers to a fragment that retains a biological activity (function or structure) substantially similar to that of the full-length DNA or protein sequence. The biological activity of a DNA sequence may be its ability to affect expression in a manner attributed to the full length sequence.
As used herein, an "engineered" object generally indicates that the object has been modified by human intervention. According to a non-limiting example: nucleic acids may be modified by changing their sequence to a sequence that does not exist in nature; nucleic acids can be modified by ligating them to nucleic acids with which they are not associated in nature, such that the ligation product has a function that is not present in the original nucleic acid; the engineered nucleic acid can be synthesized in vitro using sequences that do not exist in nature; the protein may be modified by changing the amino acid sequence of the protein to a sequence that does not exist in nature; engineered proteins may acquire new functions or properties. An "engineering" system includes at least one engineering component.
As used herein, "synthetic" and "artificial" are used interchangeably to refer to a protein or domain thereof that has low sequence identity (e.g., less than 50% sequence identity, less than 25% sequence identity, less than 10% sequence identity, less than 5% sequence identity, less than 1% sequence identity) to a naturally occurring human protein. For example, the VPR and VP64 domains are synthetic transactivation domains.
As used herein, the term "tracrRNA" or "tracrRNA sequence" may generally refer to a nucleic acid having at least about 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95% or 100% sequence identity or sequence similarity to a wild-type example tracrRNA sequence (e.g., tracrRNA or SEQ ID NO from streptococcus pyogenes, staphylococcus aureus (s. Aureus), etc.). tracrRNA may refer to a nucleic acid having up to about 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90% or 100% sequence identity or sequence similarity to a wild-type example tracrRNA sequence (e.g., tracrRNA from streptococcus pyogenes, staphylococcus aureus, etc.). tracrRNA may refer to a modified form of tracrRNA, which may include nucleotide changes, such as deletions, insertions or substitutions, variants, mutations or chimeras. tracrRNA may refer to a nucleic acid that is at least about 60% identical in a stretch of at least 6 contiguous nucleotides to a wild-type exemplary tracrRNA sequence (e.g., tracrRNA from streptococcus pyogenes, staphylococcus aureus, etc.). For example, the tracrRNA sequence may be at least about 60% identical, at least about 65% identical, at least about 70% identical, at least about 75% identical, at least about 80% identical, at least about 85% identical, at least about 90% identical, at least about 95% identical, at least about 98% identical, at least about 99% identical, or 100% identical to a wild-type, exemplary tracrRNA sequence (e.g., tracrRNA from streptococcus pyogenes, staphylococcus aureus, etc.) over a stretch of at least 6 contiguous nucleotides. By identifying regions complementary to part of the repeat sequence in adjacent CRISPR arrays, a type II tracrRNA sequence can be predicted on genomic sequences.
As used herein, a "guide nucleic acid" may generally refer to a nucleic acid that can hybridize to another nucleic acid. The guide nucleic acid may be RNA. The guide nucleic acid may be DNA. The guide nucleic acid may be programmed to site-specifically bind to the nucleic acid sequence. The nucleic acid or target nucleic acid to be targeted may comprise nucleotides. The guide nucleic acid may comprise nucleotides. A portion of the target nucleic acid may be complementary to a portion of the guide nucleic acid. The strand of the double-stranded target polynucleotide that is complementary to and hybridizes to the guide nucleic acid may be referred to as the complementary strand. The strand of the double-stranded target polynucleotide that is complementary to the complementary strand, and thus may not be complementary to the guide nucleic acid, may be referred to as the non-complementary strand. The guide nucleic acid may comprise a polynucleotide strand, and may be referred to as a "single guide nucleic acid". The guide nucleic acid may comprise two polynucleotide strands and may be referred to as a "bidirectional guide nucleic acid". The term "guide" may be included, if not otherwise stated, to refer to both single guide and double guide. The guide nucleic acid may include a segment that may be referred to as a "nucleic acid targeting segment" or a "nucleic acid targeting sequence. The nucleic acid targeting segment may comprise a sub-segment, which may be referred to as a "protein binding segment" or "protein binding sequence" or "Cas protein binding segment.
In the context of two or more nucleic acid or polypeptide sequences, the term "sequence identity" or "percent identity" generally refers to sequences that are identical or have the same specified percentage of amino acid residues or nucleotides when compared and aligned within a local or global comparison window to obtain maximum correspondence, e.g., in a pairwise alignment, or more (e.g., in a multiple sequence alignment), as measured using a sequence comparison algorithm. Suitable sequence comparison algorithms for polypeptide sequences include, for example, BLASTP adjusted using a parameter with a word length (W) of 3 and an expected value (E) of 10, a BLOSUM62 scoring matrix (gap penalty set to 11 present, extension 1) and using conditional composition scoring matrices for polypeptide sequences longer than 30 residues; BLASTs using parameters with word length (W) of 2, expected value (E) of 1000000, and PAM30 scoring matrix (for sequences less than 30 residues, gap penalty set to 9 to open the gap and 1 to extend the gap) (these are default parameters for BLASTs in BLAST suite available at https:// BLAST. CLUSTALW with parameters; smith-Waterman homology search algorithm with the following parameters: match 2, mismatch-1 and void-1; MUSCLE with default parameters; a MAFFT with the following parameters: the retree is 2 and the maximums is 1000; novafold with default parameters; HMMER hmmalign with default parameters.
As used herein, the term "ruvc_iii domain" generally refers to the third discontinuous segment of the RuvC endonuclease domain (RuvC nuclease domain comprises three discontinuous segments ruvc_ I, ruvC _ii and ruvc_iii). RuvC domains or segments thereof can generally be identified by alignment with recorded domain sequences, structural alignment with proteins with annotated domains, or by comparison with hidden markov models (Hidden Markov Model, HMM) constructed based on recorded domain sequences (e.g., pfam HMM PF18541 of ruvc_iii).
As used herein, the term "wedge" (WED) domain generally refers to a domain that interacts with predominantly the repetition of sgrnas and PAM duplex, such as found in Cas proteins, of anti-repeat duplex. WED domains can generally be identified by alignment with recorded domain sequences, structural alignment with proteins having annotated domains, or by comparison with Hidden Markov Models (HMMs) constructed based on recorded domain sequences.
As used herein, the term "PAM interaction domain" or "PI domain" generally refers to a domain that interacts with a protospacer proximity motif (PAM) outside of the seed sequence in the region targeted by the Cas protein. Examples of PAM interaction domains include, but are not limited to, topoisomerase homology (TOPO) domains and C-terminal domains (CTD) present in Cas proteins. PAM interaction domains or segments thereof can generally be identified by alignment with recorded domain sequences, structural alignment with proteins having annotated domains, or by comparison with Hidden Markov Models (HMMs) constructed based on recorded domain sequences.
As used herein, the term "REC domain" generally refers to a domain (e.g., present in a Cas protein) that includes at least one of two segments (REC 1 or REC 2) that are alpha helical domains that are considered to contact a guide RNA. REC domains or segments thereof can generally be identified by alignment with recorded domain sequences, structural alignment with proteins having annotated domains, or by comparison with a Hidden Markov Model (HMM) constructed based on recorded domain sequences (e.g., pfam PF19501 of domain REC 1).
As used herein, the term "BH domain" generally refers to a domain that is a bridged helix between NUC and REC leaves of a type II Cas enzyme (e.g., present in a Cas protein). BH domains or segments thereof can generally be identified by alignment with recorded domain sequences, structural alignment with proteins having annotated domains, or by comparison with Hidden Markov Models (HMMs) constructed based on recorded domain sequences (e.g., pfam PF16593 of domain BH).
As used herein, the term "HNH domain" generally refers to an endonuclease domain having characteristic histidine and asparagine residues. HNH domains can generally be identified by alignment with recorded domain sequences, structural alignment with proteins with annotated domains, or by comparison with Hidden Markov Models (HMMs) constructed based on recorded domain sequences (e.g., pfam HMM PF01844 of domain HNH).
The present disclosure includes variants of any of the enzymes described herein having one or more conservative amino acid substitutions. Such conservative substitutions may be made in the amino acid sequence of the polypeptide without disrupting the three-dimensional structure or function of the polypeptide. Conservative substitutions may be made by amino acid substitutions of similar hydrophobicity, polarity, and R chain length. Additionally or alternatively, by comparing aligned sequences of homologous proteins from different species, conservative substitutions may be identified by locating mutated amino acid residues between the species (e.g., non-conservative residues that do not alter the essential function of the encoded protein). Such conservatively substituted variants can comprise variants that are at least about 20%, at least about 25%, at least about 30%, at least about 35%, at least about 40%, at least about 45%, at least about 50%, at least about 55%, at least about 60%, at least about 65%, at least about 70%, at least about 75%, at least about 80%, at least about 85%, at least about 90%, at least about 91%, at least about 92%, at least about 93%, at least about 94%, at least about 95%, at least about 96%, at least about 97%, at least about 98%, or at least about 99% identical to any of the systems described herein. In some embodiments, such conservatively substituted variants are functional variants. Such functional variants may encompass sequences with substitutions such that the activity of the critical active site residues of the endonuclease is not disrupted. In some embodiments, functional variants of any of the systems described herein lack substitution of at least one of the conserved residues or functional residues described herein. In some embodiments, functional variants of any of the systems described herein lack all of the conservative residues or functional residues described herein.
Conservative representations of providing functionally similar amino acids are available from various references (see, e.g., cright on, protein: structural and molecular Properties (Proteins: structures and Molecular Properties) (W H Frieman Press (W H Freeman & Co.); 2 nd edition (12 months 1993)). The following eight groups each contain amino acids that are conservatively substituted with each other:
a. alanine (a), glycine (G);
b. aspartic acid (D), glutamic acid (E);
c. asparagine (N), glutamine (Q);
d. arginine (R), lysine (K);
e. isoleucine (I), leucine (L), methionine (M), valine (V);
f. phenylalanine (F), tyrosine (Y), tryptophan (W);
g. serine (S), threonine (T); and
h. cysteine (C), methionine (M).
SUMMARY
The discovery of new Cas enzymes with unique functions and structures may provide the possibility to further disrupt deoxyribonucleic acid (DNA) editing techniques, thereby improving speed, specificity, function and ease of use. There are relatively few functionally characterized CRISPR/Cas enzymes in the literature relative to the predicted prevalence of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) systems in microorganisms and the pure diversity of microbial species. This is in part because a large number of microbial species may not be readily cultivated under laboratory conditions. Metagenomic sequencing of natural environmental niches representing a large number of microbial species may provide the possibility of greatly increasing the number of new CRISPR/Cas systems recorded and accelerating the discovery of new oligonucleotide editing functions. A recent example of the success of this approach was demonstrated by the discovery of CasX/CasY CRISPR systems by metagenomic analysis of natural microbial communities in 2016.
The CRISPR/Cas system is an RNA-guided nuclease complex that has been described as acting as an adaptive immune system in microorganisms. In the natural environment of a CRISPR/Cas system, the CRISPR/Cas system appears in a CRISPR (clustered regularly interspaced short palindromic repeats) operon or locus, which typically comprises two parts: (i) An array of short repeated sequences (30-40 bp) separated by equally short spacer sequences encoding RNA-based targeting elements; and (ii) an ORF encoding a Cas encoding a nuclease polypeptide guided by an RNA-based targeting element and an accessory protein/enzyme. Efficient nuclease targeting of a particular target nucleic acid sequence typically requires both: (i) Complementary hybridization between the first 6-8 nucleic acids of the target (target seed) and the crRNA guide; and (ii) the presence of a Protospacer Adjacent Motif (PAM) sequence within the defined vicinity of the target seed (PAM is typically a sequence that is not commonly represented within the host genome). CRISPR-Cas systems are generally classified into 2 categories, 5 types and 16 subtypes based on shared functional characteristics and evolutionary similarity, depending on the exact function and organization of the system.
Class I CRISPR-Cas systems have large multi-subunit effector complexes and include I, III and type IV.
Type I CRISPR-Cas systems are considered to be of moderate complexity in terms of components. In a type I CRISPR-Cas system, an array of RNA targeting elements is transcribed into long precursor crrnas (pre-crrnas) that are processed at repeat elements to release short mature crrnas that direct nuclease complexes to nucleic acid targets when they are followed by a suitable short consensus sequence called a Protospacer Adjacent Motif (PAM). This treatment is performed by an endoribonuclease subunit (Cas 6) of a large endonuclease complex called cascade, which also includes the nuclease (Cas 3) protein component of the crRNA-guided nuclease complex. Cas I nucleases act primarily as DNA nucleases.
Type III CRISPR systems may be characterized by the presence of a central nuclease called Cas10 and a repeat-related mysterious protein (RAMP) comprising Csm or Cmr protein subunits. As in the type I system, mature crrnas are treated from pre-crrnas using Cas 6-like enzymes. Unlike type I and type II systems, type III systems appear to target and cleave DNA-RNA duplex (e.g., DNA strand that serves as a template for RNA polymerase).
Type IV CRISPR-Cas systems have an effector complex consisting of two genes of the RAMP proteins of the highly reduced large subunit nuclease (csf 1), cas5 (csf 3) and Cas7 (csf 2) groups and in some cases the genes of the predicted small subunits; such systems are typically found on endogenous plasmids.
Class II CRISPR-Cas systems typically have single polypeptide multi-domain nuclease effectors and include type II, type V and type VI.
Type II CRISPR-Cas systems are considered the simplest in terms of components. In a type II CRISPR-Cas system, the processing of a CRISPR array into a mature crRNA does not require the presence of a special endonuclease subunit, but rather requires a small trans-encoded crRNA (tracrRNA) region that is complementary to the array repeat sequence; the tracrRNA interacts with its corresponding effector nuclease (e.g., cas 9) and the repeat sequence to form a precursor dsRNA structure that is cleaved by endogenous rnase III, thereby generating a mature effector enzyme that loads both the tracrRNA and the crRNA. Cas II nucleases are noted as DNA nucleases. Type 2 effectors typically exhibit a structure consisting of RuvC-like endonuclease domains that employ an rnase H fold, wherein the fold of RuvC-like nuclease domains has an unrelated HNH nuclease domain inserted within. RuvC-like domains are responsible for cleavage of target (e.g., crRNA complementary) DNA strands, while HNH domains are responsible for cleavage of displaced DNA strands.
The V-type CRISPR-Cas system is characterized by a nuclease effector (e.g., cas 12) structure similar to that of a type II effector comprising RuvC-like domains. Similar to type II, most (but not all) V-type CRISPR systems use tracrRNA to process pre-crRNA into mature crRNA; however, unlike type II systems, which require RNase III to cleave the pre-crRNA into multiple crRNAs, type V systems can use the effector nuclease itself to cleave the pre-crRNA. Like the type II CRISPR-Cas system, the type V CRISPR-Cas system is again noted as a DNA nuclease. Unlike the type II CRISPR-Cas system, some type V enzymes (e.g., cas12 a) appear to have strong single-stranded non-specific deoxyribonuclease activity activated by the first crRNA directed cleavage of a double-stranded target sequence.
Type VI CRIPSR-Cas system has RNA-guided RNA endonucleases. A single polypeptide effector of a type VI system (e.g., cas 13) includes two HEPN ribonuclease domains instead of a RuvC-like domain. Unlike type II and type V systems, type VI systems also do not appear to require tracrRNA to process pre-crRNA into crRNA in some embodiments. However, like the V-type system, some VI-type systems (e.g., C2) appear to have strong single-stranded non-specific nuclease (ribonuclease) activity activated by the first crRNA directed cleavage of the target RNA.
Because of the simpler architecture of class II CRISPR-Cas, it has been most widely used for engineering and development as a designer nuclease/genome editing application.
One of the early adaptations of such systems for in vitro use can be found in Jinek et al (Science) 2012, 8, 17, 337 (6096): 816-21, which is incorporated herein by reference in its entirety. Jink studies first describe a system that involves (i) recombinantly expressed, purified full-length Cas9 (e.g., class II, type II Cas enzymes) isolated from streptococcus pyogenes SF 370; (ii) Purified mature about 42nt crRNA with about 20nt 5 'sequence complementary to the target DNA sequence to be cleaved followed by a 3' tracr binding sequence (whole crRNA transcribed in vitro from a synthetic DNA template carrying a T7 promoter sequence); (iii) In vitro transcription of purified tracrRNA from a synthetic DNA template carrying a T7 promoter sequence; and (iv) mg2+. Jinek later describes an improved engineering system in which the crRNA of (ii) is linked to the 5' end of (iii) by a linker (e.g., GAAA) to form a single fusion synthetic guide RNA (sgRNA) capable of itself guiding Cas9 to a target.
Mali et al, (science.2013, month 2, 15; 339 (6121): 823-826), incorporated herein by reference in its entirety), later applied this system to mammalian cells by providing DNA vectors encoding the following: (i) An ORF encoding a codon optimized Cas9 (e.g., a class II, type II Cas enzyme) under a suitable mammalian promoter having a C-terminal nuclear localization sequence (e.g., SV40 NLS) and a suitable polyadenylation signal (e.g., tkpa signal); and (ii) an ORF encoding an sgRNA (having a 5 'sequence starting with G followed by a 20nt complementary targeting nucleic acid sequence linked to a 3' tracr binding sequence, a linker and a tracrRNA sequence) under a suitable polymerase III promoter (e.g., U6 promoter).
Engineered nucleases
In some aspects, the disclosure relates to engineering of novel nucleic acid guided nucleases and systems. In some embodiments, the engineered nuclease is functional in a prokaryotic or eukaryotic cell for in vitro, in vivo, or ex vivo applications. In some embodiments, the present disclosure relates to engineering and optimization of systems, methods, and compositions for genome engineering involving sequence targeting, such as genome perturbation or gene editing, associated with nucleic acid-guided nuclease systems and components thereof.
In some aspects, the present disclosure provides engineered nucleases, which can comprise nucleic acid guided nucleases, chimeric nucleases, and nuclease fusions.
Chimeric or fusion engineered nucleases
A chimeric engineered nuclease as described herein can include one or more fragments or domains, and the fragments or domains can be orthologs of a nuclease, such as a nucleic acid-guided nuclease, a genus, species, or other phylogenetic group of organisms described herein. Fragments may be from nuclease orthologs of different species. The chimeric engineered nuclease may comprise fragments or domains from at least two different nucleases. The chimeric engineered nuclease may comprise fragments or domains of nucleases from at least two different species. The chimeric engineered nuclease may comprise fragments or domains from at least 2, 3, 4, 5, 6, 7, 8, 9, 10 or more different nucleases or nucleases from different species. In some embodiments, a chimeric engineered nuclease comprises more than one fragment or domain from one nuclease, wherein the more than one fragment or domain is separate from a fragment or domain from a second nuclease. In some examples, the chimeric engineered nuclease comprises 2 fragments, each fragment from a different protein or nuclease. In some examples, the chimeric engineered nuclease comprises 3 fragments, each fragment from a different protein or nuclease. In some examples, the chimeric engineered nuclease comprises 4 fragments, each fragment from a different protein or nuclease. In some examples, the chimeric engineered nuclease comprises 5 fragments, each fragment from a different protein or nuclease. In some examples, the chimeric engineered nuclease comprises 3 fragments, wherein at least one fragment is from a different protein or nuclease. In some examples, the chimeric engineered nuclease comprises 4 fragments, wherein at least one fragment is from a different protein or nuclease. In some examples, the chimeric engineered nuclease comprises 5 fragments, wherein at least one fragment is from a different protein or nuclease.
Ligation between fragments or domains from different nucleases or species may occur in multiple segments of unstructured regions. Unstructured regions may comprise regions exposed within the protein structure or regions that are not conserved within the various nuclease orthologs.
MG chimeric enzyme
CRISPR effectors described herein have native PAM specificity (see fig. 1). In one aspect, the present disclosure provides for the realization of novel PAM specificities through protein engineering. This novel PAM-specific realization can be achieved by RNA-guided domain exchange of CRISPR-associated nucleases (see fig. 2). Optimal breakpoints may exist during domain swapping and reassembly. The optimal breakpoint may be guided by the alignment of the multiple sequences described herein (see fig. 3).
In some aspects, the present disclosure provides a fusion endonuclease comprising: (a) An N-terminal sequence comprising a RuvC, REC, or HNH domain of a Cas endonuclease or variant thereof having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to SEQ ID NO 696; and (b) a C-terminal sequence comprising a WED, TOPO or CTD domain of a Cas endonuclease or variant thereof having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any one of SEQ ID nos. 697-721. In some embodiments, the fusion endonuclease comprises RuvC, REC, and HNH domains in (a). In some embodiments, the fusion endonuclease comprises RuvC and HNH domains in (a). In some embodiments, the fusion endonuclease comprises a WED, TOPO or CTD domain in (b). In some embodiments, the N-terminal sequence and the C-terminal sequence are not naturally present together in the same reading frame. In some embodiments, the N-terminal sequence and the C-terminal sequence are derived from different organisms. In some embodiments, the N-terminal sequence further comprises a RuvC-I, BH and RuvC-II domain. In some embodiments, the C-terminal sequence further comprises a PAM interaction domain. In some embodiments, the fused Cas endonuclease comprises a sequence that has at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to any of SEQ ID nos. 1-27 or 108. In some embodiments, the fusion endonuclease is configured to bind to PAM (SEQ ID NO: 53) that is not nnRGGnT. In some embodiments, the fusion endonuclease is configured to bind to PAM comprising any of SEQ ID NOS: 46-52 or 54-66.
In some aspects, the disclosure provides an endonuclease comprising an engineered nucleic acid sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any one of SEQ ID NOs 1-27, 108 or 109-110. In one aspect, the disclosure provides an endonuclease comprising an engineered nucleic acid sequence having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity to any one of SEQ ID NOs 8-12, 26-27 or 108. In one aspect, the present disclosure provides an engineered nuclease system comprising: endonucleases described herein; engineering of A guide ribonucleic acid structure configured to form a complex with the endonuclease, the engineered guide ribonucleic acid structure comprising: a guide ribonucleic acid sequence configured to hybridize to a target deoxyribonucleic acid sequence and configured to bind to the endonuclease. In some embodiments, and the engineered guide ribonucleic acid sequence further comprises a tracr ribonucleic acid sequence. In some embodiments, the endonuclease is derived from an uncultured microorganism. In some embodiments, the endonuclease is not a Cas9 endonuclease, a Cas14 endonuclease, a Cas12a endonuclease, a Cas12b endonuclease, a Cas12 c endonuclease, a Cas12d endonuclease, a Cas12e endonuclease, a Cas13a endonuclease, a Cas13b endonuclease, a Cas13c endonuclease, or a Cas13d endonuclease. In some embodiments, the endonuclease has less than 86% identity to the SpyCas9 endonuclease. In some embodiments, the system further comprises Mg 2+ Is a source of (a).
In some aspects, the present disclosure provides an engineered nuclease system comprising: (a) Any of the endonucleases described herein (e.g., fusion endonucleases) comprising (a) an N-terminal sequence comprising a RuvC, REC, or HNH domain of a Cas endonuclease or variant thereof having at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to SEQ ID NO:696, and (b) a C-terminal sequence comprising a RuvC, REC, or HNH domain of at least 99% sequence identity to any one of SEQ ID NOs: 697-721, the C-terminal sequence comprising at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 92%, to 92% A WED, TOPO or CTD domain of a Cas endonuclease or variant thereof that is 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% sequence identity less; and (b) an engineered guide ribonucleic acid structure configured to form a complex with the endonuclease, the engineered guide ribonucleic acid structure comprising: a guide ribonucleic acid configured to hybridize to a target deoxyribonucleic acid sequence; wherein the guide ribonucleic acid sequence is configured to bind to the endonuclease. In some embodiments, the guide ribonucleic acid further comprises a tracr ribonucleic acid sequence. In some embodiments, the endonuclease is derived from an uncultured microorganism. In some embodiments, the endonuclease is not a Cas9 endonuclease, a Cas14 endonuclease, a Cas12a endonuclease, a Cas12b endonuclease, a Cas12 c endonuclease, a Cas12d endonuclease, a Cas12e endonuclease, a Cas13a endonuclease, a Cas13b endonuclease, a Cas13c endonuclease, or a Cas13d endonuclease. In some embodiments, the endonuclease has less than 86% identity to the SpyCas9 endonuclease. In some embodiments, the system further comprises Mg 2+ Is a source of (a). In some embodiments, an endonuclease comprises a sequence that has at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% sequence identity to any of SEQ ID NOs 8-12, 26-27, or 108. In some embodiments, the guide ribonucleic acid sequence comprises a sequence having at least 80%, at least 81%, at least 82%, at least 83%, at least 84%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 95%, at least 97%, at least with a non-degenerate nucleotide of any one of SEQ ID NOs 33, 34, 44, 45, 78, 84, or 87Sequences that are 98% or at least 99% sequence identity.
The systems of the present disclosure can be used in a variety of applications, such as nucleic acid editing (e.g., gene editing), binding to nucleic acid molecules (e.g., sequence-specific binding). Such systems can be used, for example, to address (e.g., remove or replace) genetic mutations that may cause disease in a subject, inactivate genes in order to determine their function in cells, as diagnostic tools for detecting pathogenic genetic elements (e.g., by cleaving retroviral RNAs or amplified DNA sequences encoding pathogenic mutations), as inactivating enzymes in combination with probes to target and detect specific nucleotide sequences (e.g., sequences encoding bacterial antibiotic resistance), inactivate viruses by targeting viral genomes or to fail to infect host cells, engineer organisms to produce valuable small molecules, macromolecules or secondary metabolites by adding genes or modifying metabolic pathways, create gene driven elements for evolutionarily selected as biosensors to detect foreign small molecules and nucleotide to cell interference.
Table A-selected sequences disclosed herein
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Examples
Example 1 plasmid
The chimeric sequences were codon optimized for E.coli (E.coli) expression via the Integrated DNA technologies company (Integrated DNA Technologies, IDT) website and synthesized and cloned into pET21 vectors at the Twist Bioscience company (Twist Bioscience), unless otherwise indicated. To construct pET21-MG3-6+MG15-1 (WP) and pET21-MG3-6+MG15-1 (P), the gene fragment was amplified from pMGX3-6 and pMGX15-1 using primer P441-P446. The resulting PCR product was purified by Zymo gel DNA recovery kit and assembled into pAL3 (digested by ClaI and XhoI) by NEBUilder HiFi DNA assembly. The DNA sequence of the cloned chimeric gene was confirmed by sanger sequencing service provided by the company elam biopharma.
EXAMPLE 2 bioinformatics analysis
Based on the presence of putative HNH and RuvC catalytic residues, CRISPR type II endonucleases used herein are predicted to have nuclease activity. In addition, structural predictions suggest that residues are involved in guiding, targeting, recognition and interaction with PAM. Based on the position of the important residues, predicted type II CRISPR endonuclease domains include three RuvC domains, HNH endonuclease domains, recognition domains, PAM interaction domains, and the like. For genomic sequences encoding full length type II endonucleases immediately adjacent to the CRISPR array, tracrRNA sequences engineered to be used as one-way guide RNAs by nucleases are predicted.
Multiple sequence alignments were performed on selected RNA-guided CRISPR type II endonuclease sequences using a built-in MUSCLE aligner on the Geneius Primer software (available at https:// www.geneious.com/prime) (see FIG. 3). Protein structures of MG3-6 and MG15-1 were predicted using DNASTAR NovaFold and shown by Protean 3D. Details of the chimeric compositions are shown in table 1. Protein variants that recognize non-canonical PAM are engineered by ligating domains from closely and remotely related type II CRISPR endonucleases under guidance through predicted structural model information and guide RNA optimization (see fig. 7).
TABLE 1 chimeric compositions
Example 3-in vitro PAM enrichment assay
The PAM sequence of the nuclease used herein was determined by expression in an escherichia coli lysate based expression system or in a recombinant in vitro translation (myTXTL, arbor biosciences (Arbor Biosciences) or PURExpress, new england biosciences (New England Biolabs)). The E.coli codon optimized protein sequence was transcribed and translated from the PCR fragment under the control of the T7 promoter. The mixture was diluted into a reaction buffer (10mM Tris pH 7.5, 100mM NaCl,10mM MgCl) with protein-specific sgRNA and PAM plasmid library (PAM library U67/U40) 2 ) Is a kind of medium. The plasmid library contains spacer sequences that match those in a single guide, followed by 8N mixed bases, a subset of which is considered to have the correct PAM. After 1-3 hours, the reaction is stopped and the DNA is recovered by DNA cleaning kits such as Zymo DCC, AMPure XP beads, qiaquick, etc. Subjecting the DNA to a blunt end ligation reaction that adds an adapter sequence to the cleaved libraryThe plasmid remains intact while the circular plasmid remains intact. PCR was performed using primers specific for the library and adaptor sequences (LA 065 and LA 125) and resolved on the gel to identify active protein complexes (see fig. 4 and 6). The resulting PCR product was further amplified by PCR using high throughput sequencing primers (TrueSeq) and KAPA HiFi HotStart with cycle parameters 8. Samples subjected to NGS analysis were quantified by 4200tape station (agilent technologies (Agilent Technologies)) and pooled together. NGS library was purified by AMPure XP beads and quantified by KAPA library Quant kit (henna) kit using the AriaMx real-time PCR system (agilent technologies). Sequencing this library (a subset of the starting 8N library) revealed sequences containing the correct PAM (see fig. 5).
Example 4-unidirectional guide design for in vivo targeting
As used herein, unidirectional guide (sgRNA) structures include the following: 5'- -22nt protospacer-repeat-tracr- -3'. 20 one-way guides targeting mouse albumin intron 1 were designed using the Geneius Prime software (https:// www.geneious.com/Prime /). In some cases, the guide is chemically synthesized by the IDT and includes chemical modifications ("Alt-R" modifications) of the guide optimized by the IDT to improve the performance of the Cas9 guide.
Example 5 in vitro transcription of mRNA
The coding sequence (CDS) encoding the chimera (e.g., MG3-6+MG3-4 (SEQ ID NO: 10)) was codon optimized for mice and chemically synthesized at Twist bioscience. CDS was cloned into mRNA production vector pMG010. The architecture of pMG010 includes a series of elements: t7 promoter-5 'UTR-initiation codon-nuclear localization signal 1-CDS-nuclear localization signal 2-termination codon-3' UTR-107 nucleotide polyA tail (SEQ ID NO: 108). Plasmid pMG010 containing the MG3-6+MG3-4 CDS was purified from 200ml bacterial culture using the EndoFree plasmid kit (Qiagen). The vector was digested with SapI overnight to linearize the plasmid downstream of the polyA tail. Linearized vectors were purified using phenol/chloroform DNA extraction. In vitro transcription was performed using HiT 7T 7 RNA polymerase (new england biosystems) at 50 ℃ for 1 hour. The in vitro transcribed mRNA was treated with DNase at 37℃for 10 minutes and purified using MEGAclear transcription cleaning kit (ThermoFisher). mRNA was quantified by absorbance at 260nm and its size and purity were assessed by automatic electrophoresis (TapeStation, agilent) and demonstrated to have the expected size.
Example 6-Hepa1-6 cell transfection and Albumin targeting
300ng of mRNA and 350ng SEQ ID NO:67-86 of each one-way guide RNA (sgRNA) were co-transfected into Hepa1-6 cells as follows. The day before transfection, hepa1-6 cells were seeded into 24 wells at a density to achieve 70% confluence after 24 hours. The next day, 25 μl OptiMEM medium and 1.25 μ l Lipofectamine Messenger Max solution (Semerle Feisher) were mixed and vortexed for 5 seconds to make solution A. 300ng of MG3-6+MG3-4 chimeric mRNA and 350ng of one-way guide were mixed together with 25. Mu.l of OptiMEM in separate tubes to make solution B. Solutions a and B were mixed and incubated at room temperature for 10 minutes and then added directly to the Hepa1-6 cells. Media was aspirated two days after transfection and genomic DNA was purified according to instructions from Purelink genomic DNA mini-kit (sameifeishier inc) (see fig. 9). The results indicated that the best performing sgRNAs were those designated g87 (SEQ ID NO: 72) and g34 (SEQ ID NO: 70), with significant editing also occurring for the gRNAs g45 (SEQ ID NO: 67), g44 (SEQ ID NO: 71), g59 (SEQ ID NO: 76), g78 (SEQ ID NO: 68), g84 (SEQ ID NO: 79) and g33 (SEQ ID NO: 80).
EXAMPLE 7 Mulberry sequencing of genome editing samples
Primers flanking genomic regions targeted by single guide RNAs (e.g., albumin genes) were designed. PCR amplification using primers 57F (SEQ ID NO: 97) and 1072R (SEQ ID NO: 98) was performed using a Phusion fast high fidelity PCR master mix (Semer Fielder Co.) to yield 1016bp PCR products. The PCR products were purified and concentrated using a DNA cleaner and concentrator 5 (Zymo Research) and 100ng of the PCR products were subjected to Sanger sequencing (in the elen Biosciences) using 8pmol of separate sequencing primers (132F, 282F, 446R and 460F,SEQ ID NO:99-102). Mulberry sequencing results were analyzed using an algorithm called CRISPR edit inference (available at https:// gitsub. Com/synhego-open/ice) and data were plotted using GradPrsm (see FIG. 9B).
EXAMPLE 8 MG3-6/3-4 nuclease guide screening of mouse HAO-1 Gene Using mRNA transfection
Guide RNA targeting MG3-6/3-4 nuclease for exons 1 to 4 of the mouse HAO-1 gene (encoding glycolate oxidase) was identified on a computer by searching for the PAM sequence 3'NNAAA (A/T) N5'. A total of 23 guide chemistries with the least predicted off-target sites in the mouse genome were synthesized as one-way guide RNAs. 300ng mRNA and 120ng of one-way guide RNA were transfected into Hepa1-6 cells as follows. The day prior to transfection, hepa1-6 cells, which had been cultured in DMEM, 10% FBS, 1xNEAA medium for less than 10 days, were seeded into TC-treated 24 well plates without Pen/Strep. Cells were counted and a volume equivalent to 60,000 living cells was added to each well. Additional pre-equilibration medium was added to each well to bring the total volume to 500 μl. On the day of transfection, 25 μl of OptiMEM medium and 1.25ul Lipofectamine Messenger Max solution (Semerle Feisher) were mixed in the main mix, vortexed, and allowed to stand at room temperature for at least 5 minutes. In separate tubes, 300ng of MG 3-6-MG-3-4-encoded mRNA (SEQ ID NO: 108) and 120ng of sgRNA (scaffold sequence SEQ ID NO: 34) were mixed together with 25. Mu.L of OptiMEM medium and vortexed briefly. An appropriate volume of messenger max solution was added to each RNA solution, mixed by flicking the tube, and briefly spun at low speed. The complete editing reagent solution was incubated for 10 minutes at room temperature and then added directly to the Hepa1-6 cells. Two days after transfection, the medium was aspirated from each well of the Hepa1-6 cells and passed through a culture medium with MagMAX TM The genomic DNA was purified by automated magnetic bead purification from KingFisher Flex of the DNA multisample over 2.0 kit. The activities of the guides are summarized in tables 2 and 3, while the primers used are summarized in table 4.
Table 2: average Activity of MG3-6/3-4 guide at mouse HAO1 delivered by mRNA transfection
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Table 3: results of testing MG3-6/3-4 guide with a more relaxed PAM design at mouse HAO1 delivered by mRNA transfection
Table 4: primers designed for the mouse HAO1 gene were used for PCR and sanger sequencing at each of the first four exons.
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Example 9 guided chemical optimization of MG3-6/3-4 and MG3-6 II type nucleases
40 different chemically modified guides (named mAlb3634-34-0 to mAlb 3634-34-44) were designed and the activity of 39 of these guides was tested. Wizard, mH3634-34-32, failed rna synthesis and was therefore not tested. The guide spacer sequence chosen as a model for insertion of various chemical modifications was marb 3634-34 (targeting albumin intron 1) as it proved to be the most active guide in the guide screening of the mouse hepatocyte cell line Hepa1-6 cells (table 5 and fig. 10).
Table 5: activity of chemically modified wizards in Hepa1-6 cells
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The sgRNA of MG3-6/3-4 comprises a spacer at the 5' end followed by the CRISPR repeat and transactivation CRISPRRNA (tracr). The CRISPR repeat sequence and tracr are identical to the MG3-6 nuclease (FIGS. 11a, 11 b). CRISPR repeats and tracr form a structured RNA comprising 3 stem loops (fig. 11 a). The different regions of the stem-loop are modified by replacing the 2' hydroxyl group of ribose with a methyl group or by replacing the phosphodiester backbone with a Phosphorothioate (PS). In addition, the spacer at the 5' position of the guide is modified with 2' -O-methyl or a mixture of 2' -fluoro bases and PS bonds. Different combinations of chemical modifications were designed, called marb 3634-34-0 to marb 3634-34-44, and the sequences are shown in table 6.
39 single guide editing activities with identical base sequences but different chemical modifications were evaluated in Hepa1-6 cells by co-transfection of mRNA encoding MG3-6/3-4 and guide; the results are shown in table 6 and fig. 12.
Table 6: chemically modified MG3-6/3-4 guide sequences and Activity in Hepa1-6 cells when co-transfected with MG3-6/3-4mRNA
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A guide with the same base sequence and commercially available chemical modification called AltR1/AltR2 was used as a control. The spacer sequence in these guides targets the 22 nucleotide region in albumin intron 1 of the mouse genome. The guide mAlb3634-34-0 (without chemical modification) showed 72% activity relative to the AltR1/AltR2 guide. The wizard, marb 3634-34-1, showed 124% activity relative to the actr 1/actr 2 wizard, showing the importance of wizard stability for editing: the mAlb3634-34-1 is more stable than the mAlb3634-34-0 (FIGS. 13 and 14). Importantly, mAlb3634-34-17 retained 147% activity relative to AltR1/AltR 2. Incorporation of 2' -O-fluoro in the spacer greatly increased the stability of mAlb3634-34-35 and the guide retained 65% activity. mAlb3634-34-35 contains 2' -O-methyl and PS bonds in the loops of the three stem loops of the MG3-6/3-4 guide. Importantly, mAlb3634-34-42 retains 66% of its activity and this guide contains as much fluorine in the spacer as mAlb3634-34-17, but it also contains PS bonds in all the loops present in the gRNA. The activity of mAlb3634-34-27 was 67% and that of mAlb3634-34-29 was 114%. In the modification, these guides contained PS bonds in the loop of the first stem-loop and 2' -O-methyl in the first strand of the first stem-loop for mAlb3634-34-27 and mAlb3634-34-29, respectively. When these 2 modifications are combined (2' -O-methyl in the first strand of the first stem-loop and PS bond in the loop of the first stem-loop), the guide loses its activity (mAlb 3634-34-33, mAlb3634-34-36, mAlb 3634-34-38), showing the complexity of the gRNA/protein interaction and proving that the results of simple extrapolation are difficult to predict.
To test the stability of these chemically modified guides compared to the guide without chemical modification (natural RNA), stability assays were performed using crude cell extracts. The crude extract of mammalian cells is selected because it contains the nuclease mixture to which the guide RNA will be exposed when delivered to mammalian cells in vitro or in vivo. Hepa1-6 cells were collected by adding 3ml cold PBS to each 15cm dish and releasing the cells from the surface of the dish using a cell scraper. The cells were pelleted at 200g for 10 min and frozen at-80 ℃ for future use. For stability assays, cells were resuspended in 4 volumes of cold PBS (e.g., for 100mg pellet, cells were resuspended in 400ul of cold PBS). Triton X-100 was added to a concentration of 0.2% (v/v), the cells were vortexed for 10 seconds, placed on ice for 10 minutes, and vortexed again for 10 seconds. Triton X-100 is a mild nonionic detergent that disrupts cell membranes but does not inactivate or denature proteins at the concentrations used. A stable reaction was established on ice and included 20. Mu.l of crude cell extract, 2pmol each (1 ul in 2uM stock). Each wizard establishes six reactions, including: input, 0.5 hours, 1 hour, 4 hours, 9 hours, and in some cases 21 hours (time in hours refers to the length of time each sample was incubated). Samples were incubated at 37℃for 0.5 to 21 hours while the input control was placed on ice for 5 minutes. After each incubation period, the reaction was stopped by adding 300ul of a mixture of phenol and guanidine thiocyanate (Tri reagent, zymo research company), which immediately denatured all proteins and effectively inhibited ribonuclease and promoted subsequent recovery of RNA. After adding Tri reagent, the samples were vortexed for 15 seconds and stored at-20 ℃. RNA was extracted from the samples using the Direct-zol RNA miniprep kit (Zymo research company) and eluted in 100ul nuclease-free water. Detection of modified guides was performed using Taqman RT-qPCR using Taqman miRNA assay technology (Semer femto), and primers and probes were designed to specifically detect sequences in mAlb3634-34sgRNA, which was the same for all guides. The data are plotted as a function of the percentage of residual sgrnas associated with the input samples (tables 7 and 8; fig. 13 and 14).
Table 7: guide for chemical modification of MG3-6/3-4 stability at 37℃for 9 hours
Table 8: guide for chemical modification of MG3-6/3-4 stability at 37℃for 21 hours
Stability assays showed that the introduction of three 2' -O-methyl and three PS linkages at the 5' and 3' ends of the guide significantly improved stability (fig. 13 and 14). As in marb 3634-17 and marb 3634-42, the addition of additional 2' -fluoro to the 5' and 3' modifications did not show significant advantage at early time points (up to 9 hours), as shown in fig. 13, but a slight improvement in stability was apparent when the stability assay was run for 21 hours (fig. 14). The inclusion of 2-O-methyl and PS bonds (mAlb 3634-35) in all the loops of the stem loop provides a significant increase in stability compared to the guide with chemical modifications at the 5 'and 3' ends (mAlb 3634-1), as can be seen in FIG. 13. However, when these results are repeated and at a longer time point, this increase becomes less pronounced at an earlier time point and becomes pronounced at a longer time point of up to 21 hours, as can be seen in fig. 14. The inclusion of 2' -O-methyl in the first strand of the different stem loops provides stability advantages for up to 9 hours, as shown by comparing mAlb3634-0 with mAlb3634-29 and mAlb 3634-30. The combination of 2' -O-methyl in the first strand with all stem-loops and PS bond in the loops of all stem-loops, mAlb3634-36, showed significantly increased stability at 9 hours compared to the end-modified guide (mAlb 3634-0). However, this guide was inactive when tested by mRNA transfection in Hepa1-6 cells. In general, adding additional modifications (e.g., 2 '-O-methyl, 2' -O-fluoro, or PS linkages) to the end-modified guide does not provide a great advantage in terms of stability at an earlier time point (up to 9 hours) (fig. 13), but a small increase in stability at a longer time point is apparent (fig. 14). The large size (110 nt) and highly structured nature of such grnas may make them inherently more stable than shorter or less structured guide RNAs, limiting the stability benefits of chemical modification. The 5 'and 3' ends of the modification guide appear to provide a good level of protection against nucleases. However, adding additional modifications to the guide may provide further benefits in vivo, as these types of modifications may reduce immunogenicity.
Example 10 protein recombination of V-A type nuclease
To expand the ability to rapid PAM exchange beyond type II nucleases, three V-Sup>A nucleases were selected for protein recombination. Breakpoints are selected based on the predicted structural information (table 1). Similar to type II enzyme recombinants, type V chimeras show activity when proteins are recombined from closely related families. In vitro PAM enrichment and NGS analysis revealed consistent results: PAM of the chimera is inherited from the C-terminal parent. Potential structural breaks in protein recombination from distant related families can be avoided by using breakpoint optimization (fig. 15).
EXAMPLE 11 analysis of TRAC Gene editing results at the DNA level in HEK293T cells
MG3-6/4RNP (104 pmol protein/300 pmol guide) nuclei containing sgRNA described in Table 7A and SEQ ID NOS: 119-158 below were transfected into HEK293T cells (200,000) using a Lonza 4D electroporator. Cells were harvested and genomic DNA was prepared three days after transfection. PCR primers suitable for NGS-based DNA sequencing were generated, optimized, and used to amplify a single target sequence for each guide RNA. Amplicons were sequenced on a genecontaining MiSeq machine and analyzed with proprietary Python scripts to measure gene editing (fig. 16). The results indicate that sgrnas C1, F2 and B3 are most effective in inducing insertions and deletions, with significant editing also occurring for sgrnas D2, H2, A3 and C3.
Table 7A: gRNA and targeting sequences used in example 11
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EXAMPLE 12 analysis of the Gene editing results of B2M at the DNA level in HEK293T cells
MG3-6/4RNP (104 pmol protein/300 pmol guide) nuclei containing sgRNA described in Table 7B and SEQ ID NOS 159-210 below were transfected into HEK293T cells (200,000) using a Dragon 4D electroporators. Cells were harvested and genomic DNA was prepared three days after transfection. PCR primers suitable for NGS-based DNA sequencing were generated, optimized, and used to amplify a single target sequence for each guide RNA. Amplicons were sequenced on a genecontaining MiSeq machine and analyzed with proprietary Python scripts to measure gene editing (fig. 17). The results indicate that sgrnas a1, G1, B2, H2 and B4 are most effective in inducing editing, with significant editing also detected for sgrnas C1, D1, A2, H1, E2, F2, G2, A3, C3 and D3.
Table 7B: gRNA and targeting sequences used in example 12
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EXAMPLE 13 analysis of TRAC Gene editing results at the DNA and phenotype level in T cells
Primary T cells were purified from PMBC using a negative selection kit (meitian gentle (Miltenyi)) according to the manufacturer's recommendations. MG3-6/4RNP (104 pmol protein/120 pmol guide) nuclei containing sgRNA described in Table 7A and SEQ ID NOS: 119-158 were transfected into T cells (200,000) using a Dragon 4D electroporator. Cells were harvested and genomic DNA was prepared three days after transfection. PCR primers suitable for NGS-based DNA sequencing were generated, optimized, and used to amplify a single target sequence for each guide RNA. Amplicons were sequenced on a genecontaining MiSeq machine and analyzed with proprietary Python scripts to measure gene editing. For analysis by flow cytometry, 100,000T cells were stained with anti-CD 3 antibody at 4C for 30 min 3 days after nuclear transfection and analyzed on an Attune Nxt flow cytometer (fig. 18). The results show that sgrnas C1, D2, F2, H2, A3, B3, C3 and D3 show significant edits, with the largest edits made by sgrnas C1 and B3.
EXAMPLE 14 analysis of Gene editing results of B2M at the DNA level in T cells
Primary T cells were purified from PMBC using a negative selection kit (meitian gentle) according to the manufacturer's recommendations. MG3-6/4RNP (104 pmol protein/120 pmol guide) nuclei containing sgRNA described in Table 7B and SEQ ID NOS 159-210 were transfected into T cells (200,000) using a Dragon 4D electroporator. Cells were harvested and genomic DNA was prepared three days after transfection. PCR primers suitable for NGS-based DNA sequencing were generated, optimized, and used to amplify a single target sequence for each guide RNA. Amplicons were sequenced on a genecontaining MiSeq machine and analyzed with proprietary Python scripts to measure gene editing (fig. 19).
EXAMPLE 15 analysis of Gene editing results of TRBC1 and TRBC2 at the phenotypic level in T cells
Primary T cells were purified from PBMCs using a negative selection kit (meitian gentle) according to the manufacturer's recommendations. MG3-6/4RNP (104 pmol protein/120 pmol guide) nuclei containing sgRNA described in Table 7C and SEQ ID NOS 211-382 below were transfected into T cells (200,000) using a Lonza 4D electroporation apparatus. For analysis by flow cytometry, 100,000T cells were stained with anti-CD 3 antibody at 4C for 30 min 3 days after nuclear transfection and analyzed on an Attune Nxt flow cytometer (fig. 20). As can be seen from the results in fig. 20, for TRBC1, the sgrnas with the highest performance are A1, B1, E1, G4, H4, and B5. Similarly, for TRBC2, the highest performing sgrnas are D1, H1, and A5.
Table 7C: gRNA and targeting sequences used in example 15
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EXAMPLE 16 analysis of Gene editing results of ANGPTL3 at the DNA level in Hep3B cells
MG3-6/4RNP (104 pmol protein/120 pmol guide) nuclei containing sgRNA described in Table 7D and SEQ ID NOS: 383-572 below were transfected into Hep3B cells (100,000) using a Dragon 4D electroporator. Cells were harvested and genomic DNA was prepared three days after transfection. PCR primers suitable for NGS-based DNA sequencing were generated, optimized, and used to amplify a single target sequence for each guide RNA. Amplicons were sequenced on a genecontaining MiSeq machine and analyzed with proprietary Python scripts to measure gene editing (fig. 21). The results show that sgrnas E5, C6, A7, A8, A9, G10, E11, a12 and C12 are the highest performing sgrnas in this assay.
Table 7D: gRNA and targeting sequences used in example 16
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EXAMPLE 17 analysis of Gene editing results of PCSK9 at the DNA level in Hep3B cells
MG3-6/4RNP (104 pmol protein/120 pmol guide) nuclei containing sgRNA described in Table 7E and SEQ ID NOS 573-602 below were transfected into Hep3B cells (100,000) using a Dragon 4D electroporator. Cells were harvested and genomic DNA was prepared three days after transfection. PCR primers suitable for NGS-based DNA sequencing were generated, optimized, and used to amplify a single target sequence for each guide RNA. Amplicons were sequenced on a genecontaining MiSeq machine and analyzed with proprietary Python scripts to measure gene editing (fig. 22). The results show that sgrnas B1, F1, A2 and E2 achieved the highest editing performance, with significant editing also occurring for D2, C2, B2, H1 and F2.
Table 7E: gRNA and targeting sequences used in example 17
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EXAMPLE 18 in vivo Gene editing in mouse liver by systemic administration of lipid nanoparticle delivered chimeric nucleases MG3-6/3-4
To assess the ability of MG3-6/3-4 chimeric type II nucleases to edit the genome in vivo in living animals, lipid nanoparticles were used to deliver mRNA encoding MG3-6/3-4 nucleases (RNA version of SEQ ID NO: 603) and one-way guide RNA (sgRNA) targeting different portions of the coding sequence of the mouse HAO-1 gene (e.g., as described in the following tables). The HAO-1 gene encodes glycolate oxidase, an enzyme involved in glycolate metabolism, and is expressed mainly in hepatocytes in the liver. Screening of sgrnas targeting HAO-1 coding sequences was performed in the mouse hepatocyte line Hepa1-6 to identify active guides. Sgrnas mH364-7 and mH364-20, which exhibited 46% and 26% editing in Hepa1-6 cells when transfected with mRNA encoding MG3-6/3-4 nuclease, were selected for testing in mice. mH364-7 targets exon 2 and mH364-20 targets exon 4.
Various chemical modifications of the native RNA structure are incorporated into these sgrnas. When incubated in extracts from mammalian cells, the chemical modifications were selected based on their ability to improve the stability of sgrnas in vitro without negatively affecting editing activity. For initial testing in mice, sgrnas mH364-7 and mH364-20 incorporating chemistry 1 and chemistry 35 were selected for testing and designated mH364-7-1, mH364-20-1, mH364-7-35, mH364-20-35. The sequences of these guides containing chemical modifications are shown in table 9 below.
Table 9: sequence and chemical modification of guide RNAs tested in mice
m:2' -O methyl modified base,: phosphorothioate backbones
mRNA encoding MG3-6/3-4 nuclease was produced by in vitro transcription of linearized plasmid templates using T7 RNA polymerase, nucleotides and enzymes purchased from New England Biolabs or triple Biotechnology Co (Trilink Biotechnologies).
The DNA sequence transcribed into RNA (SEQ ID No: 603) comprises the following elements in the order 5 'to 3': t7 RNA polymerase promoter, 5' untranslated region (5 ' UTR), nuclear localization signal, short linker, coding sequence for MG3-6/3-4 nuclease, short linker, nuclear localization signal and 3' untranslated region, and about 100 nucleotides polyA tail (not included in SEQ ID No: 603).
The protein sequence encoded in the synthetic mRNA encoded in this MG3-6/3-4 cassette comprises the following 5 'to 3' elements: a nuclear localization signal from SV40, a five amino acid linker (GGGS), a protein coding sequence of MG3-6/3-4 nuclease from which the initiation methionine codon is removed, a 3 amino acid linker (SGG), and a nuclear localization signal from nucleoplasmin. The DNA sequence of the protein coding region of this cassette was modified using commercially available algorithms to reflect codon usage in humans. CleanCAP @ available from Triplex Biotechnology Co TM ) Reagents encoding approximately 100 nucleotide polyA tails in plasmids for in vitro transcription and co-transcriptionally end-cap mRNA. Uridine in mRNA was replaced with N1-methyl pseudouridine.
Lipid Nanoparticle (LNP) formulations for delivery of MG3-6/3-4mRNA and guide RNA are based on LNP formulations described in the literature, including Kauffman et al (Nano Lett) 2015,15,11,7300-7306
(https:// doi.org/10.1021/acs.nanolet.5b 024970). The four lipid components were dissolved in ethanol and mixed in the appropriate molar ratio to prepare a lipid working mixture. mRNA and guide RNA were mixed at a 1:1 mass ratio prior to formulation or formulated in LNP alone and then co-injected into mice at a 1:1 mass ratio of the two RNAs. In either case, the RNA was diluted in 100mM sodium acetate (pH 4.0) to prepare an RNA working stock solution. The lipid working stock and the RNA working stock were mixed in a microfluidic device (Ignite NanoAssembler, precision nanosystems company (Precision Nanosystems)) at a flow rate ratio of 1:3 and a flow rate of 12 ml/min, respectively. LNP was dialyzed against Phosphate Buffered Saline (PBS) for 2 to 16 hours and then concentrated using an Amicon spin concentrator (Millipore) until a reduced volume was reached. The concentration of RNA in LNP formulations was measured using Ribogreen reagent (Sesameisier). The diameter and Polydispersity (PDI) of the LNP were determined by dynamic light scattering. Representative LNPs range in diameter from 65nm to 120nm with PDI from 0.05 to 0.20.LNP was intravenously injected into 8 to 12 week old C57Bl6 wild-type mice (0.1 mL per mouse) via the tail vein at a total RNA dose of 1mg RNA per kg body weight. Eleven days after dosing, 3 out of each group of 5 mice were sacrificed and livers were collected and homogenized in digestion buffer provided in PureLink genomic DNA isolation kit (sameir femil) using a bead mill (ohni international (Omni International)). Genomic DNA was purified from the resulting homogenate using a PureLink genomic DNA isolation kit (Siemens technologies Co.) and quantified by measuring absorbance at 260 nm. Genomic DNA purified from buffer-only mice was used as a control. 28 days after dosing, the remaining 2 mice per group were sacrificed and livers were collected and homogenized using a bead mill (ohm corporation) in digestion buffer provided in PureLink genomic DNA isolation kit (zemoeimer). Genomic DNA was purified from the resulting homogenate using a PureLink genomic DNA isolation kit (Siemens technologies Co.) and quantified by measuring absorbance at 260 nm. Genomic DNA purified from buffer-only mice was used as a control.
The liver genomic DNA was then PCR amplified using a first set of primers flanking the two targeted regions of the guide. The PCR primers used are shown in table 10 below.
Table 10: sequences of PCR primers and next generation sequencing primers for analysis of genome editing in mice
The 5' end of these primers included a conserved region complementary to the PCR primer used in the second PCR, followed by 5N to provide sequence diversity and improve the quality of MiSeq sequencing, and ended with sequences complementary to the target region in the mouse genome. UsingA hot start high fidelity 2X master mix (New England Biolabs) PCR was performed on 100ng of genomic DNA and the annealing temperature was 60℃for a total of 30 cycles. Round 2 and 10 cycles of PCR were then performed using primers designed to add unique dual-cause nalmefene barcodes (IDTs) for next generation sequencing on the MiSeq instrument. Each sample was sequenced to a depth of greater than 10,000 reads using 150bp paired end reads. Reads were pooled to generate a single 250bp sequence, with the percent insertions and deletions and the insertion and deletion curves calculated using proprietary Python scripts.
For individual mice, NGS analysis results of insertions and deletions from mice on day 11 post-dosing are shown in table 11 and summarized in fig. 32.
Table 11: genome editing of MG3-6/3-4 at the HAO-1 locus in whole livers of wild-type mice analyzed by next generation sequencing on day 11 post LNP dosing.
Data for individual mice are shown. All mice receiving the guide RNA LNP also received LNP encapsulating MG3-6/3-4mRNA. The% of insertions and deletions of OOF is the percentage of all insertions and deletions of the sequence that results in the HAO1 coding sequence listing. The average total OOF% is the average percentage of all alleles of the HAO1 coding sequence box. The total number of NGS sequencing reads is given.
Group 2 mice received LNP encapsulated guide RNAmH 364-7-1. Group 3 mice received LNP encapsulated guide RNAmH 364-7-35. Group 4 mice received LNP encapsulating guide RNA mH 364-20-1. Group 5 mice received LNP encapsulated guide RNAmH 364-20-35. All mice in groups 2 to 5 also received LNP, which encapsulates MG3-6/3-4mRNA mixed with guide RNA containing 1:1RNA mass ratio prior to injection. No insertions and deletions were detected in the livers of PBS buffer injected mice (see table 11). Mice injected with LNP encapsulating guide 364mHA-G7-1 and MG3-6/3-4mRNA showed insertions and deletions at the target site in HAO-1 at an average frequency of 53.0%. Mice injected with LNP encapsulating guide 364mHA-G7-35 and MG3-6/3-4mRNA showed insertions and deletions at the target site in HAO-1 at an average frequency of 23.6%. Mice injected with LNP encapsulating guide 364mHA-G20-1 and MG3-6/3-4mRNA showed insertions and deletions at the target site in HAO-1 at an average frequency of 8.9%. Mice injected with LNP encapsulating guide 364mHA-G20-35 and MG3-6/3-4mRNA showed insertions and deletions at the target site in HAO-1 at an average frequency of 2.5%. These data demonstrate that guides with spacer 7 (364 mHA-G7-1 and 364 mHA-G7-35) are significantly more potent in vivo than guides with spacer 20 (364 mHA-G20-1 and 364 mHA-G20-35) when compared with guides with the same chemical modification. This is consistent with the higher editing level of these 2 guide sequences observed in the Hepa1-6 cells by mRNA-based transfection (mH 364-7 shows 46% insertions and deletions and mH364-20 shows 26% insertions and deletions in the Hepa1-6 cells). For both wizard 7 (for chemistry #1,2.2 times edit) and wizard 20 (for chemistry #1,3.5 times edit), wizard chemistry #1 resulted in a higher edit level than chemistry # 35. These data indicate that MG3-6/3-4 nuclease can be edited in vivo in mice at target sites specified by sgRNA. Furthermore, sgrnas with a set of chemical modifications designated chemical #1 were able to facilitate editing of 53% of genomic DNA in whole liver when delivered using LNP. The LNP used in these studies was absorbed by binding of apolipoprotein E (apoE) to LNP, a ligand that binds to low density lipoprotein receptor (see, e.g., yan et al, biochemical and biophysical research Comm (Biochem Biophys Res Commun) 2005 328 (1): 57-62.Doi:10.1016/j. Bbrc.2004.12.137, akinec et al, "molecular therapy (Mol Ther): 2010 (7): 1357-64, doi: 10.1038/mt.2010.85).
The liver is composed of many different cell types. In the liver of mice, hepatocytes account for approximately 52% of all cells (and 35% of hepatocytes contain two nuclei), with Coulomb cells (Kupffer cells) (18%), ito cells (8%) and endothelial cells (22%) constituting the remaining cells (histochemistry: cell biology (Histochem Cell Biol) & lt 131 & gt-726 https:// doi.org/10.1007/s 00418-009-0577-1). By extrapolation, without wishing to be bound by theory, it is predicted that about 60% [ ((52+ (0.35 x 52))/(48+ (0.35 x 52))) ] of total nuclei in mouse liver is derived from hepatocytes because LDL receptors are predominantly expressed on hepatocytes in the liver (see e.g. https:// www.proteinatlas.org/ENSG00000130164-LDLR/tissue/liver # imid_ 2815831), the LNP used in the mouse studies described herein is predicted to be predominantly absorbed by hepatocytes.
The HAO1 gene encodes the protein Glycolate Oxidase (GO), i.e., an intracellular enzyme involved in glycolate metabolism. To determine if gene editing observed in HAO1 gene resulted in reduced expression of GO protein in liver, total protein was extracted from individual leaves of mouse liver in the same study. The GO protein was detected using western blot assay using commercially available antibodies against mouse GO protein. Protein focal adhesion proteins were used as a loading control for western blots, as the predicted focal adhesion protein levels were not affected by gene editing of the HAO1 gene. As shown in fig. 24, the levels of GO protein in the liver of mice treated with LNP encapsulating MG3-6/3-4mRNA and the sho 1-targeted sgrnas were significantly reduced. Quantification of western blots using image analysis software, burle company ((Biorad)), and normalization of GO against focal adhesion protein levels showed an average 75%, 58%, 4% and 24% reduction in GO levels in mice treated with sgrnas mH364-7-1, mH364-7-35, mH364-20-1 and mH364-20-35, respectively. The extent of GO protein reduction correlated with the frequency of insertions and deletions in these groups of mice (see table 11). These data indicate that MG3-6/3-4 nucleases in combination with appropriately designed sgrnas can be used to create insertions and deletions in genes of interest in a living mammal and reduce (knock down) the production of proteins encoded by the genes. Reducing the expression of a particular gene may be therapeutically beneficial in a particular disease. In the case of HAO1 gene encoding GO protein, a decrease in GO protein levels in the liver is expected to be beneficial in patients with the primary hyperoxaluria type I of the genetic disease (Martin-Higueras, molecular therapy 24, 719-725). Thus, MG3-6/3-4 nuclease together with appropriate sgRNA containing appropriate chemical modifications targeting the HAO1 gene is a potential method of treating primary hyperoxaluria type I.
EXAMPLE 19 comparison of the efficiency of editing of the MG3-6/3-4 Gene in mice Using the same guide RNA sequence with four different chemical modifications
The effect of chemical modification on sgrnas on in vivo editing efficiency was further investigated by testing 4 different guide chemistries introduced into the same guide RNA sequence. Guide RNA7 targeting the mouse HAO1 gene was synthesized with chemical modifications #1, #35, #42, or # 45. The sequence of these wizards is shown in table 12 below.
Table 12: MG3-6/3-4sgRNA guide 7 sequence targeting mouse HAO1
mRNA encoding MG3-6/3-4 nuclease is produced by in vitro transcription of the linearized plasmid template using T7 RNA polymerase, nucleotides and enzymes purchased from New England Biolabs or triple Biotechnology. The DNA sequence transcribed into RNA comprises the following elements in 5 'to 3': t7 RNA polymerase promoter, 5' untranslated region (5 ' UTR), nuclear localization signal, short linker, coding sequence for MG3-6/3-4 nuclease, short linker, nuclear localization signal and 3' untranslated region (SEQ ID No: 603) and about 100 nucleotides polyA tail (not included in SEQ ID No: 603).
The protein sequence encoded in the synthetic mRNA encoded in this MG3-6/3-4 cassette comprises the following 5 'to 3' elements: a nuclear localization signal from SV40, a five amino acid linker (GGGS), a protein coding sequence of MG3-6/3-4 nuclease from which the initiation methionine codon is removed, a 3 amino acid linker (SGG), and a nuclear localization signal from nucleoplasmin. The DNA sequence of the protein coding region of this cassette was modified using commercially available algorithms to reflect codon usage in humans. CleanCAP @ available from Triplex Biotechnology Co TM ) Reagents encoding approximately 100 nucleotide polyA tails in plasmids for in vitro transcription and co-transcriptionally end-cap mRNA. Uridine in mRNA was replaced with N1-methyl pseudouridine. Lipid Nanoparticle (LNP) formulations for delivery of MG3-6/3-4mRNA and guide RNA are based on LNP formulations described in the literature, including Kauffman et al (nanometer flash, 2015,15,11,7300-7306, https:// doi. Org/10.1021/acs. Nanolet.5b024970). The four lipid components were dissolved in ethanol and mixed in the appropriate molar ratio to prepare a lipid working mixture. mRNA and guide RNA were mixed at a 1:1 mass ratio prior to formulation or formulated in LNP alone and then co-injected into mice at a 1:1 mass ratio of the two RNAs. In either case, the RNA was diluted in 100mM sodium acetate (pH 4.0) to prepare an RNA working stock solution. Lipid and RNA working stock solutions were prepared in a microfluidic device (Ignite NanoAssembler, precision nanosystems) at a flow rate ratio of 1:3 and 12 ml/min, respectivelyThe flow rates of the clocks are mixed. LNP was dialyzed against Phosphate Buffered Saline (PBS) for 2 to 16 hours and then concentrated using an Amicon spin concentrator (millbot corporation) until a reduced volume was reached. The concentration of RNA in LNP formulations was measured using Ribogreen reagent (Sesameisier). The diameter and Polydispersity (PDI) of the LNP were determined by dynamic light scattering. Representative LNPs range in diameter from 65nm to 120nm with PDI from 0.05 to 0.20.LNP was intravenously injected into 8 to 12 week old C57Bl6 wild-type mice (0.1 mL per mouse) via the tail vein at a total RNA dose of 1mg RNA per kg body weight. Ten days after dosing, 3 out of each group of 5 mice were sacrificed and livers were collected and homogenized using a bead mill (ohm corporation) in digestion buffer provided in PureLink genomic DNA isolation kit (sameir femoris). Genomic DNA was purified from the resulting homogenate using a PureLink genomic DNA isolation kit (Siemens technologies Co.) and quantified by measuring absorbance at 260 nm. Genomic DNA purified from buffer-only mice was used as a control. 28 days after dosing, the remaining 2 mice per group were sacrificed and livers were collected and homogenized using a bead mill (ohm corporation) in digestion buffer provided in PureLink genomic DNA isolation kit (zemoeimer). Genomic DNA was purified from the resulting homogenate using a PureLink genomic DNA isolation kit (Siemens technologies Co.) and quantified by measuring absorbance at 260 nm. Genomic DNA purified from buffer-only mice was used as a control.
The liver genomic DNA was then PCR amplified using a first set of primers flanking the two targeted regions of the guide. The PCR primers used are shown in table 10. The 5' end of these primers included a conserved region complementary to the PCR primer used in the second PCR, followed by 5N to provide sequence diversity and improve the quality of MiSeq sequencing, and ended with sequences complementary to the target region in the mouse genome. UsingA hot start high fidelity 2X master mix (New England Biolabs) was used to PCR 100ng of genomic DNA with an annealing temperature of 60℃and maintainedFor a total of 30 cycles. Round 2 and 10 cycles of PCR were then performed using primers designed to add unique dual-cause nalmefene barcodes (IDTs) for next generation sequencing on the MiSeq instrument. Each sample was sequenced to a depth of greater than 10,000 reads using 150bp paired end reads. Reads were pooled to generate a single 250bp sequence, with the percent insertions and deletions and the insertion and deletion curves calculated using proprietary Python scripts.
The compiled results are summarized in fig. 25 and listed in table 13.
Table 13: genome editing frequency in whole liver HAO1 Gene of Single mice treated with guide RNA7 encapsulating MG3-6/3-4mRNA and targeting HAO-1 Gene with chemical modifications 42 (mH 364-7-42), 45 (mH 364-7-45), 1 (mH 364-7-1) and 35 (mH 364-7-35)
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Control mice injected with PBS buffer contained no measurable insertions and deletions at the target site of guide 7. The mean insertion and deletion frequencies of LNP mice receiving guide mH364-7-1, mH364-7-35, mH364-7-42, and mH364-7-45 were 46.1%, 26.6%, 32.4%, and 32.1%, respectively, indicating that guide RNA chemistry #1 was the most potent, followed by #42 and #45, with chemistry #35 being the least potent. These data indicate that chemical modifications to the bases and backbones at the 5 'and 3' ends of the guide RNA provide the highest in vivo efficacy in the chemistry tested. Additional modification of internal bases did not improve in vivo efficacy. These findings are in contrast to published data for spCas9 sgRNA, where modifications of bases or backbones at both ends and at the internal sequence of the sgRNA are necessary for optimal in vivo editing (Yin et al, nature Biotechnology (Nature Biotechnology), doi: 10.1038/nbt.4005), and modifications of only the 5 'and 3' ends of the sgRNA use similar LNP delivery, achieving low levels of editing (20% insertions and deletions) in the liver.
Total RNA was purified from individual leaves of the same mice described in Table 13 and used to measure HAO-1mRNA levels by digital droplet PCR (dd-PCR). PBS-injected mice were used as controls and the levels of HAO-1mRNA in the liver of the edited mice were compared to these controls. dd-PCR assays are designed and optimized using standard techniques. ddPCR is a highly accurate method for determining the absolute copy number of a specific nucleic acid in a complex mixture (e.g., taylor et al, science report (Sci Rep), 7,2409 (2017). doi:10.1038/s41598-017-02217-x). Total liver RNA was first converted to cDNA by reverse transcription and then quantified in dd-PCR assay using GAPDH as an internal control to normalize between samples. As shown in Table 14, HAO1mRNA levels were reduced in individual mice treated with LNP encapsulating MG3-6/3-4mRNA and sgRNA targeting the mouse HAO1 gene, and the magnitude of the reduction correlated with the frequency of insertions and deletions.
Table 14: whole liver HAO1mRNA levels in individual mice treated with LNP encapsulating MG3-6/3-4mRNA and targeting guide RNA 7 with the chemically modified 42 (mH 364-7-42), 45 (mH 364-7-45), 1 (mH 364-7-1) and 35 (mH 364-7-35) genes.
The same mice in table 10 were analyzed.
A maximum reduction in HAO1mRNA was observed in the group of mice treated with sgRNA mH364-7-1, while a minimum reduction in HAO-1mRNA was observed in mice treated with sgRNA mH 364-7-35. When frameshift mutations are introduced into the coding sequence of the gene by a mechanism called nonsense-mediated decay, HAO1mRNA may be reduced (Brogna et al, nature Structure and molecular biology (Nat Struct Mol Biol), 16,107-113 (2009),doi:10.1038/ nsmb.1550). By MG3-6/34 observations of HAO-1mRNA reduction in mouse livers edited at HAO-1 gene are consistent with the presence of insertions and deletions that lead to high shift rates, as shown in table 15.
Table 15: analysis of the frequency of editing leading to frame shifts in the liver of mice treated with LNP encapsulating MG3-6/3-4mRNA and sgRNA No. 7 (G7) targeting the HAO-1 Gene
The percent of box (OOF%) is calculated by analyzing the NGS data using a custom algorithm.
In Table 15, the average frequency of insertions and deletions that result in the frameshift of the HAO1 coding sequence is determined from the NGS data. This analysis shows that most insertions and deletions result in frame shifts of all four tested sgrnas.
The HAO1 gene encodes the protein Glycolate Oxidase (GO), i.e., an intracellular enzyme involved in glycolate metabolism. To determine if gene editing observed in HAO1 gene resulted in reduced expression of GO protein in liver, total protein was extracted from individual leaves of mouse liver in the same study described in fig. 25 and tables 13 to 15. The GO protein was detected using western blot assay using commercially available antibodies against mouse GO protein. Equal amounts of protein were loaded onto western blots. As shown in FIG. 25, the levels of GO protein in the liver of mice treated with LNP encapsulating MG3-6/3-4mRNA and the sgRNA targeting HAO1 were reduced. Guides mH364-7-42 (mice 7, 8), mH364-7-45 (mice 12, 13) and mH364-7-1 (mice 17, 18) resulted in a significant reduction in GO protein. Among the 4 guides tested, guide mH364-7-35 (mice 22, 23) with the lowest level of insertions and deletions did not significantly reduce GO protein levels. These data indicate that MG3-6/3-4 nucleases in combination with appropriately designed sgrnas can be used to create insertions and deletions in genes of interest in a living mammal and reduce (knock down) the production of proteins encoded by the genes. Reducing the expression of a particular gene may be therapeutically beneficial in a particular disease. In the case of HAO1 gene encoding GO protein, a decrease in GO protein levels in the liver is expected to be beneficial in patients with the primary hyperoxaluria type I of the genetic disease (Martin-Higueras, molecular therapy 24, 719-725). Thus, MG3-6/3-4 nuclease together with appropriate sgRNA containing appropriate chemical modifications targeting the HAO1 gene is a potential method of treating primary hyperoxaluria type I.
While preferred embodiments of the present invention have been shown and described herein, it will be obvious to those skilled in the art that such embodiments are provided by way of example only. The present invention is not intended to be limited to the specific embodiments provided in the specification. While the invention has been described with reference to the foregoing specification, the descriptions and illustrations of the embodiments herein are not intended to be in a limiting sense. Numerous variations, changes, and substitutions will now be appreciated by those skilled in the art without departing from the invention. Furthermore, it is to be understood that all aspects of the invention are not limited to the specific descriptions, configurations, or relative proportions set forth herein, depending on various conditions and variables. It should be understood that various alternatives to the embodiments of the invention described herein may be employed in practicing the invention. Accordingly, it is contemplated that the present invention likewise encompasses any such alternatives, modifications, variations or equivalents. The following claims are intended to define the scope of the invention and their equivalents are therefore covered by this method and structure within the scope of these claims and their equivalents.
Sequence listing
<110> macrogenomics intellectual property technology Limited liability company (METAGENOMI IP TECHNOLOGIES, LLC)
<120> novel engineered and chimeric nucleases
<130> 55921-717.601
<140>
<141>
<150> 63/237,484
<151> 2021-08-26
<150> 63/140,620
<151> 2021-01-22
<160> 610
<170> patent In version 3.5
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Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
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Tyr Asp Lys Glu Ile Lys Lys Asp Ile Ile Lys Gly Phe Asn Pro Glu
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Asp Lys Pro Phe Lys Gly Asn Thr Lys Pro Leu Glu Thr Ile Tyr Gly
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Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
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Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
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Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
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Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
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660 665 670
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Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
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Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
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Ser Glu Lys Ala Ala Arg Glu Phe Phe Lys Ser Tyr Leu Asp Lys Ile
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Tyr Ser Lys Arg Ile Ile Gly Gly Lys Ala Cys Met Val Lys Arg Asn
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Asn Pro Gln Ile Arg Lys Met Ile Gly Glu Phe Ala Ala Thr Asn Pro
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Asp Glu Ser Ala Trp Arg Lys Trp Cys Glu Glu Val Arg Leu Pro Ser
865 870 875 880
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Glu Ala Asp Glu Tyr Lys Asp Leu Ser Lys Asp Gly Cys Gly Ala Tyr
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Arg Lys Gly Asp Gly His Lys Gly Gln Val Val Trp Glu Ser Val Asp
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Gly Lys Tyr Tyr Val Glu Pro Val Tyr Val His Ala Ser Lys Ala Gly
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Val Met Ala Ala Leu Asn Ala Asn Pro Lys Lys Lys Arg Ile Cys Gly
945 950 955 960
Met Phe Asn Ser His Cys Thr Val Asp Val Gly Asp Val Tyr Asn Asp
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Arg Gly Asp Phe Ile Leu Pro Ala Gly Arg Tyr Met Val Asn Thr Ile
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Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
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Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
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Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
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Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
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Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
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Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
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Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
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Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
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Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
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Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
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Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
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Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
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Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
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Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
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Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
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Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
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Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
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Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Met Cys Leu Cys Phe Ala Pro Thr Gly Val
740 745 750
Asn Ser Lys Arg Ala Arg Val Asp Met Leu Leu Pro Pro Lys Ile Arg
755 760 765
Ser Glu Lys Glu Ala Glu Leu Phe Phe Arg Lys Tyr Leu Asp Lys Leu
770 775 780
Ile Pro Val Asp Val Ala Pro Lys Lys Pro Lys Leu Glu Asp Gly Ile
785 790 795 800
Tyr Ser Met Arg Thr Val Gly Gly Lys Lys Ile Met Ala Arg Arg Val
805 810 815
Asn Leu Val Asp Leu Ala Tyr Lys Ser Gly Leu Lys Pro Val Tyr Asp
820 825 830
Val Ser Val Leu Ile Lys Leu Leu Asp Lys Lys Glu Arg Gly Ile Ile
835 840 845
Asn Pro Gln Ile Arg Lys Leu Val Ala Asp Phe Ala Arg Thr Asn Pro
850 855 860
Ser Glu Asp Glu Trp Lys Lys Trp Cys Gly Glu Cys Arg Leu Pro Ser
865 870 875 880
Lys Asn Gly Leu Gly Thr Arg Val Ile Arg Val Leu Leu Asn Tyr Gly
885 890 895
Glu Pro Ala Glu Tyr Lys Asp Leu Ser Lys Asp Gly Arg Gly Ala Phe
900 905 910
Arg Arg Gly Asp Gly His Lys Gly Gln Ile Val Trp Glu Ser Thr Asp
915 920 925
Gly Lys Tyr Cys Val Leu Pro Ile Tyr Val His Ala Ser Lys Ala Lys
930 935 940
Leu Leu Ala Glu Leu Cys Ala Asn Pro Lys Lys Lys Arg Ile Cys Gly
945 950 955 960
Ile Phe Thr Ser His Cys Met Val Lys Val Gly Asn Thr Tyr Asn Asn
965 970 975
Lys Gly Glu Leu Leu Leu Pro Glu Gly Val Tyr Met Leu Asn Thr Ile
980 985 990
Arg Thr Asp Gly Trp Ile Gln Leu Thr Ser Ala Asn Gly Asp Lys Ser
995 1000 1005
Lys Pro Ile Asn Ile Asn Tyr Leu Met Lys Ala Gly Met Lys Lys
1010 1015 1020
Val Pro Val Lys Asp Leu
1025
<210> 5
<211> 1068
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_2-4 chimera
<400> 5
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Leu Thr Leu Gly Leu Ala Thr Ala Leu Val
740 745 750
Pro Gly Ile Glu Arg Lys Glu Leu Arg Arg Ala Leu Ser Leu Arg Gln
755 760 765
Ala Lys Gly Asp Asp Ala Thr Leu Leu Arg Ser Asp Pro Lys Leu Gly
770 775 780
Glu Ala Leu Arg Trp Arg Thr Glu Asp Arg Phe Glu Ala Ala Pro Leu
785 790 795 800
Ser Gly Lys Leu Glu Ser Ala Val Arg Arg Ala Leu Ala Glu Gly Arg
805 810 815
Val Val Gln His Val Pro Ala Lys Arg Gln Gly Met Lys Val Asp Ser
820 825 830
Asn Phe Phe Gly Phe Val Glu Phe Asp Glu Thr Gly Arg Leu Arg Val
835 840 845
Arg Gln Lys Met Arg Ser Pro Thr Thr Arg Arg Arg Glu Ile Lys Thr
850 855 860
Thr Val Lys Asn Gly Lys Asn Leu His Thr Leu Ser His Leu Ser Leu
865 870 875 880
Asp Pro Lys Ser Trp Leu Gly Ala Pro Asp His Pro Leu Arg Arg Lys
885 890 895
Gln Leu Glu His Gly Leu Arg Thr Glu Asn Asp Leu Ala Asn Pro Lys
900 905 910
Leu Gly Asn Ile Arg Gly Met Leu Pro Ile Arg Glu Asn Trp Gly Ile
915 920 925
Ala Leu Ile Thr Lys Asp Gly Ser Pro Arg Leu Asp Val Ile Pro Tyr
930 935 940
Ile Asn Val His Gln Trp Leu Glu Val Leu Ala Leu Glu Asn Gly Gly
945 950 955 960
Gly Ser Pro Val Val Leu Arg Lys Gly His Leu Val Gly Phe Asp Ala
965 970 975
Glu Lys Cys Pro Glu Glu Tyr Cys Gly Ala Trp Met Leu Leu Gly Val
980 985 990
Lys Asp Gly Arg Ser Gly Thr Thr Leu Glu Leu Ile Arg Pro Trp Met
995 1000 1005
Val Ala Pro Arg Lys Gly Gly Thr Lys Glu Ser Ser Ala Lys Gln
1010 1015 1020
Ala Ile Lys Pro Ala Ser Gly Tyr Ser Glu Lys Glu Gly Lys Ala
1025 1030 1035
Ser Gly Val Phe Leu Gln Arg Ser Ala Asp Val Phe Leu Lys Leu
1040 1045 1050
Gly Leu Arg Pro Leu Asp His Asp Leu Thr Gly Ile Ala Ala Phe
1055 1060 1065
<210> 6
<211> 1006
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_2-7 chimera
<400> 6
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Val Thr Gln Gly Leu Ala Leu Leu Leu Phe
740 745 750
Ala Pro Glu Asp Trp Pro Leu Leu Val Lys Arg Asn Leu Pro Asp Ser
755 760 765
Glu Gln Arg His Leu Lys Ala Arg Tyr Pro Phe Leu Asp Phe Ser Ala
770 775 780
Asp Lys His Ile Ser Ile Gln Asp Leu Pro Glu Asp Thr Leu His Thr
785 790 795 800
Ile Ser Glu Arg Leu Ala Glu Cys Arg Val Val Arg His Ile Pro Ala
805 810 815
Lys Met His Gly Ile Ile Val Asp Gln Thr Thr Trp Gly Thr Val Ala
820 825 830
Ala Gly Ala Ile Thr Thr Leu Arg Gln Lys Thr Thr Glu Lys Asn Ala
835 840 845
Arg Cys Asp Glu Asn Gly Lys Arg Phe Ile Lys Thr Thr Glu Lys Lys
850 855 860
Arg Ser Leu Leu Leu Gly Gly Pro Asp Ala Pro Asp Gly Lys Leu Ala
865 870 875 880
Lys Ile Lys Gly Ala Ile Leu Val Thr Glu Asn Trp Gly Cys Ala Leu
885 890 895
Asp Pro Ser Pro Thr Val Ile Pro His Phe Lys Val Tyr Pro Gln Leu
900 905 910
Arg Ala Leu Arg Glu Lys Asn Gly Gly Arg Pro Ile Arg Ile Leu Arg
915 920 925
Lys Gly Ser Leu Ile Gln Val Lys Ala Gly Thr Tyr Gln Gly Ile Trp
930 935 940
Ser Val Ala Ser Ile Lys Asp Asn Ala Asp Gly Ile Cys Leu Asp Ile
945 950 955 960
Asn Ala Ala Asp Lys Val Lys Leu Glu Asn Arg Ser Asp Asp Ser Lys
965 970 975
Ile Asn Val Arg Leu Asp Ser Leu Arg Lys Ser Gly Leu Lys Ile Leu
980 985 990
Lys Pro Lys Leu Thr Gly Ala Cys Pro Thr Thr Ser Ser Pro
995 1000 1005
<210> 7
<211> 1109
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_3-1 chimera
<400> 7
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ala Val Leu Thr Leu Gln Ser Pro Ala Ile
740 745 750
Tyr Arg Val Leu Leu Thr Arg Val Asn Leu Lys His Glu His Glu Val
755 760 765
Thr Gly Glu Ala Pro Glu Trp Arg Asp Tyr Glu Gly Ala Asp Gln Ala
770 775 780
Glu Lys Val Leu Tyr Arg Arg Trp Gln Lys Asn Ile Ala Thr Leu Ala
785 790 795 800
Glu Leu Met Arg Gln Glu Ile Glu Asn Asn Arg Val Pro Val Thr Arg
805 810 815
Pro Ile Arg Leu Arg Lys Ser Arg Gly Ala Val His Asp Ala Thr Val
820 825 830
Met Lys Ala Leu Glu Arg Asp Leu Trp Gly Glu Trp Asp Ala Gln Ala
835 840 845
Ile Asp Arg Leu Val Asp Pro Glu Leu His Leu Ala Leu Arg Lys Leu
850 855 860
Phe Thr Ser Thr Lys Ser Lys Lys Ile Asp Val Asp Ala Thr Ser Gln
865 870 875 880
Gly Leu Pro Glu Arg Tyr Leu Ala Asn Gln Thr Val Gln Leu Phe Asp
885 890 895
Ala Asp Ala Pro Ser Val Met Ser Pro Arg Gly Ile Leu Arg Ile Gly
900 905 910
Ala Gly Thr His His Ala Arg Leu Leu Thr Trp Asp Asp Pro Lys Lys
915 920 925
Gly Pro Gln Leu Gly Ile Gln Arg Val Phe Ala Ala Glu Phe Gly Glu
930 935 940
Ile Leu Lys Asp Ala Ser Ser Asn Asp Leu Phe Glu Ala Pro Ile Pro
945 950 955 960
Phe His Thr Met Ser His Arg Asp Leu Gln Pro Lys Val Arg Ala Ala
965 970 975
Val Glu Gln Gly Leu Thr Arg Gln Ile Gly Trp Ile Thr Gln Gly Asp
980 985 990
Glu Leu Glu Ile Asp Pro Ala Asp Phe Val Gly Glu Ala Asn Ala Phe
995 1000 1005
Gly Asn Phe Leu Arg Glu Phe Pro Glu Arg Ser Trp Ser Ile Ala
1010 1015 1020
Gly Leu Lys Lys Ser Asn Thr Ile Val Ile Arg Pro Leu Leu Leu
1025 1030 1035
Ser Gln Glu Gly Val Thr Ala Ala Ile Ser Pro His Ala Ala Lys
1040 1045 1050
Ile Val Glu Asn Gly Ile Glu Leu Ser Asn Ser Thr Leu Phe Thr
1055 1060 1065
Ala Pro Gly Thr Gly Ile Ile Arg Arg Thr Gly Leu Gly Arg Pro
1070 1075 1080
Arg Trp Asp Ser Gly Pro Ala His Leu Pro Glu Ser Phe Asn Val
1085 1090 1095
His Ala Arg Met Thr Gln Gln Ser Ala Arg Asp
1100 1105
<210> 8
<211> 1122
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_3-2 chimera
<400> 8
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ala Val Leu Thr Leu Leu Asp Pro Ser Val
740 745 750
Ala Lys Thr Leu Ala Met Arg Leu Asp Leu Lys Arg Glu Gln Gln Asp
755 760 765
Ser Gly Arg Asp Thr Arg Trp Lys Glu Phe Lys Gly Leu Thr Pro Ala
770 775 780
Ser Gln Glu Arg Phe Ile Lys Trp Cys Gln Ala Ser Glu Cys Leu Ala
785 790 795 800
Asp Met Leu Arg Gln Gln Ile Glu Ala Asp Arg Val Pro Val Val Val
805 810 815
Pro Leu Arg Ile Ser Pro Ser Asn Gly Ala Val His Asp Asp Ser Val
820 825 830
Arg Pro Leu Thr Arg Gln Lys Ile Asp Ser Thr Trp Asp Arg Lys Ser
835 840 845
Ile Asn Arg Ile Val Asp Pro Glu Ile His Val Ala Met Arg Arg Leu
850 855 860
Leu Asn Asn Gly Thr Ser Leu Pro Glu Asp Lys Asn Arg Val Leu Asp
865 870 875 880
Leu Pro Asp Gly Asn Glu Leu Gly Pro His Asp Glu Val Glu Leu Phe
885 890 895
Ser Thr Ser Ala Ala Ser Ile Lys Leu Arg Arg Gly Gly Ser Ala Glu
900 905 910
Ile Gly Gly Ser Ile His His Ala Arg Val Tyr Ala Trp Met Gly Ala
915 920 925
Lys Gly Gln Leu Glu Tyr Gly Met Met Arg Val Phe Gly Ala Glu Phe
930 935 940
Pro Thr Leu Thr Lys Leu Ser Gly Ser Lys Asp Ile Leu Arg Met Pro
945 950 955 960
Ile His Ala Gly Ser Met Ser Tyr Arg Asp Met Gln Asp Arg Val Arg
965 970 975
Lys Pro Ile Glu Ser Asp Ile Ala Val Glu Leu Gly Trp Ile Thr Gln
980 985 990
Gly Asp Glu Leu Glu Ile Leu Pro Glu Ala His Leu Glu Thr Ala Gly
995 1000 1005
Gly Leu Gly Asp Phe Leu Lys Ser Phe Pro Glu Thr Gln Trp Thr
1010 1015 1020
Ile Asp Gly Phe Asn Asp Pro Ser Arg Leu Arg Val Arg Pro Arg
1025 1030 1035
Leu Met Ser Leu Glu Gly Arg Asp Thr Ile Asp Ala Met Gly His
1040 1045 1050
Leu Ser Asp Thr Glu Lys Leu Lys Ile Lys Gln Ala Leu Ser Lys
1055 1060 1065
Gly Leu Met Val Ser Ala Ser Glu Leu Leu Ser His Gly Ala Lys
1070 1075 1080
Ile Ile Arg Arg Asp His Leu Gly Arg Pro Arg Trp Arg Gly Asn
1085 1090 1095
Ala Arg Pro Val Ser Ile Glu Leu Glu Gln Val Ala Asn Gln Leu
1100 1105 1110
Val Asn His Arg Ser Val Asp Gly Gln
1115 1120
<210> 9
<211> 1125
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_3-3 chimeras
<400> 9
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ala Val Met Thr Leu Leu Asn Pro Ser Val
740 745 750
Ala Val Thr Leu Glu Gln Arg Arg Met Leu Lys Gln Glu Asn Asp Tyr
755 760 765
Ser Ser Pro Arg Gly Gln His Asp Asn Gly Trp Arg Asp Phe Ile Gly
770 775 780
Arg Gly Glu Ala Ser Gln Ser Lys Phe Leu His Trp Lys Lys Thr Ala
785 790 795 800
Val Val Leu Ala Asp Leu Ile Ser Glu Ala Ile Glu Gln Asp Thr Ile
805 810 815
Pro Val Val Asn Pro Leu Arg Leu Arg Pro Gln Asn Gly Ser Val His
820 825 830
Lys Asp Thr Val Glu Ala Val Leu Glu Arg Thr Val Gly Asp Ser Trp
835 840 845
Thr Asp Lys Gln Val Ser Arg Ile Val Asp Pro Asn Thr Tyr Ile Ala
850 855 860
Phe Leu Ser Leu Leu Gly Arg Lys Lys Glu Leu Asp Ala Asp His Gln
865 870 875 880
Arg Leu Val Ser Val Ser Ala Gly Val Lys Leu Leu Ala Asp Glu Arg
885 890 895
Val Gln Ile Phe Pro Glu Glu Ala Ala Ser Ile Leu Thr Pro Arg Gly
900 905 910
Val Val Lys Ile Gly Asp Ser Ile His His Ala Arg Leu Tyr Gly Trp
915 920 925
Lys Asn Gln Arg Gly Asp Ile Gln Val Gly Met Leu Arg Val Phe Gly
930 935 940
Ala Glu Phe Pro Trp Phe Met Arg Glu Ser Gly Val Lys Asp Ile Leu
945 950 955 960
Arg Val Pro Ile Pro Gln Gly Ser Gln Ser Tyr Arg Asp Leu Ala Ala
965 970 975
Thr Thr Arg Lys Phe Ile Glu Asn Gly Gln Ala Thr Glu Phe Gly Trp
980 985 990
Ile Thr Gln Asn Asp Glu Ile Glu Ile Ser Ala Glu Glu Tyr Leu Ala
995 1000 1005
Thr Asp Lys Gly Asp Ile Leu Ser Asp Phe Leu Gly Ile Leu Pro
1010 1015 1020
Glu Ile Arg Trp Lys Val Thr Gly Ile Glu Asp Asn Arg Arg Ile
1025 1030 1035
Arg Leu Arg Pro Leu Leu Leu Ser Ser Glu Ala Ile Pro Asn Met
1040 1045 1050
Leu Asn Gly Arg Leu Leu Thr Gln Glu Glu His Asp Leu Ile Ala
1055 1060 1065
Leu Val Ile Asn Lys Gly Val Arg Val Val Val Ser Thr Phe Leu
1070 1075 1080
Ala Leu Pro Ser Thr Lys Ile Ile Arg Arg Asn Asn Leu Gly Ile
1085 1090 1095
Pro Arg Trp Arg Gly Asn Gly His Leu Pro Thr Ser Leu Asp Ile
1100 1105 1110
Gln Arg Ala Ala Thr Gln Ala Leu Glu Gly Arg Asp
1115 1120 1125
<210> 10
<211> 1134
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_3-4 chimera
<400> 10
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ala Val Met Thr Leu Leu Asn Arg Ser Val
740 745 750
Ala Leu Thr Leu Glu Gln Arg Ser Gln Leu Arg Arg Ala Phe Tyr Glu
755 760 765
Leu Glu Leu Asp Lys Leu Asp Arg Asp Gln Leu Lys Pro Gly Glu Asp
770 775 780
Trp Arg Asn Phe Thr Gly Leu Tyr Glu Ala Ser Gln Asn Lys Phe Ser
785 790 795 800
Glu Trp Lys Lys Ala Ala Thr Val Leu Gly Asp Leu Leu Ala Glu Ala
805 810 815
Ile Glu Asp Asp Ala Ile Ala Val Val Ser Pro Leu Arg Leu Arg Pro
820 825 830
Gln Asn Gly Ser Val His Asp Asp Thr Ile Asn Ala Val Lys Lys Leu
835 840 845
Thr Leu Gly Ser Ala Trp Pro Ala Asp Ala Val Lys Arg Ile Val Asp
850 855 860
Pro Glu Ile Tyr Leu Ala Met Lys Asp Val Leu Gly Lys Leu Lys Glu
865 870 875 880
Leu Pro Glu Asp Ser Ala Arg Ser Leu Glu Leu Ser Asp Gly Arg Tyr
885 890 895
Ile Glu Ala Asp Asp Glu Val Leu Phe Phe Pro Lys Lys Ala Ala Ser
900 905 910
Ile Leu Thr Pro Arg Gly Ala Ala Glu Ile Gly Asn Ser Ile His His
915 920 925
Ala Arg Leu Tyr Ser Trp Leu Thr Lys Lys Gly Glu Leu Lys Phe Gly
930 935 940
Met Leu Arg Val Tyr Gly Ala Glu Phe Pro Trp Leu Met Arg Glu Ser
945 950 955 960
Gly Ser Arg Asp Val Leu His Met Pro Ile His Pro Gly Ser Gln Ser
965 970 975
Phe Arg Gly Met Gln Asp Gly Val Arg Lys Ala Val Glu Ser Gly Glu
980 985 990
Ala Val Glu Phe Gly Trp Ile Thr Gln Asp Asp Glu Leu Glu Phe Asp
995 1000 1005
Pro Glu Asp Tyr Ile Ala His Gly Gly Asp Asp Glu Leu Asn Arg
1010 1015 1020
Leu Leu Arg Val Met Pro Glu Arg Arg Trp Arg Val Asp Gly Phe
1025 1030 1035
Tyr Asn Ala Gly Thr Leu Arg Ile Arg Pro Ala Leu Leu Ser Ala
1040 1045 1050
Glu Gln Leu Pro Ser Glu Leu Gln Lys Lys Val Ala Asp Lys Thr
1055 1060 1065
Leu Ser Asp Val Glu Leu Ile Leu Leu Arg Ala Val Gln Arg Gly
1070 1075 1080
Leu Phe Val Ala Ile Ser Ser Phe Leu Pro Leu Glu Ser Leu Lys
1085 1090 1095
Val Ile Arg Arg Asn Asn Leu Gly Phe Pro Arg Trp Arg Gly Asn
1100 1105 1110
Gly Asn Leu Pro Thr Ser Phe Glu Val Arg Ser Ser Ala Leu Arg
1115 1120 1125
Ala Leu Gly Val Glu Gly
1130
<210> 11
<211> 1123
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_3-7 chimera
<400> 11
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ala Val Leu Thr Leu Leu Asn Arg Ser Val
740 745 750
Ala Val Thr Leu Glu Gln Arg Arg Leu Ile Lys Gln Gln Arg Glu Tyr
755 760 765
Ser Leu Glu Lys Ser Arg Arg Glu Arg Asp Asn Val Trp Arg Asp Phe
770 775 780
Met Gly Leu Gly Pro Ala Ala Gln Glu Lys Phe Ala Lys Trp Lys Lys
785 790 795 800
Thr Ala Tyr Val Leu Ala Asp Ile Ile Lys Glu Ala Ile Ser Asn Asp
805 810 815
Ala Ile Pro Val Val Ser Pro Leu Arg Leu Arg Pro Gln Asn Gly Ser
820 825 830
Val His Leu Asp Thr Val Asp Ala Val Leu Glu Arg Thr Ile Gly Asp
835 840 845
Ala Trp Thr Val Asp Gln Val His Arg Ile Val Asn Pro Gln Ile Tyr
850 855 860
Leu Ala Phe Ala Gly Tyr Leu Gly Asn Gln Lys Ala Leu Asp Pro Asp
865 870 875 880
Ser Ser Arg Val Leu Ala Leu Asn Asp Gly Arg Lys Leu Thr Ala Glu
885 890 895
Asp Val Ile Tyr Val Phe Pro Glu Lys Ala Ala Ser Ile Leu Thr Pro
900 905 910
Arg Gly Val Val Lys Ile Gly Glu Ser Val His His Val Arg Leu Tyr
915 920 925
Ala Trp Lys Asn Arg Lys Gly Lys Ala Glu Val Gly Met Leu Arg Val
930 935 940
Phe Gly Ala Glu Phe Pro Trp Leu Met Arg Glu Ser Gly Val Lys Asp
945 950 955 960
Val Leu Arg Val Pro Ile His Thr Gly Ser Gln Ser Tyr Arg Asp Leu
965 970 975
Ser Phe Thr Val Arg Lys Asn Ile Glu Lys Gly Glu Ala Ala Glu Ile
980 985 990
Gly Trp Leu Thr Gln Asn Glu Glu Leu Glu Phe Asn Pro Glu Ser Tyr
995 1000 1005
Leu Gln Glu Gly Gly Lys Asp Lys Leu Ala Lys Phe Leu Ala Phe
1010 1015 1020
Leu Pro Glu Thr Arg Trp Arg Val Asp Gly Phe Pro Met Pro Asp
1025 1030 1035
Lys Leu Arg Ile Arg Pro Ala Leu Leu Ser Arg Glu Glu Ile Pro
1040 1045 1050
Glu Gly Val Phe Arg Thr Glu Glu Gln Ser Leu Leu Glu Glu Ala
1055 1060 1065
Leu Thr Lys Gly Leu Ile Ile Ala Thr Lys Gly Leu Leu Ser Leu
1070 1075 1080
Pro Asp Val Lys Val Leu Arg Arg Asn Asn Leu Gly Ile Pro Arg
1085 1090 1095
Trp Arg Gly Gly Ser Tyr Arg Pro Val Ser Leu Asp Ile Gln Arg
1100 1105 1110
Ala Ala Leu Ala Ala Leu Asp Glu Gln Glu
1115 1120
<210> 12
<211> 1134
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_3-8 chimera
<400> 12
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ala Val Met Thr Leu Leu Asn Arg Ser Val
740 745 750
Ala Leu Thr Leu Glu Gln Arg Ser Gln Leu Arg Arg Ala Phe Tyr Glu
755 760 765
Gln Gly Leu Asp Lys Leu Asp Arg Asp Gln Leu Lys Pro Glu Glu Asp
770 775 780
Trp Arg Asn Phe Ile Gly Leu Ser Leu Ala Ser Gln Glu Lys Phe Leu
785 790 795 800
Glu Trp Lys Lys Val Thr Thr Val Leu Gly Asp Leu Leu Ala Glu Ala
805 810 815
Ile Glu Asp Asp Ser Ile Ala Val Val Ser Pro Leu Arg Leu Arg Pro
820 825 830
Gln Asn Gly Arg Val His Lys Asp Thr Ile Ala Ala Val Lys Lys Gln
835 840 845
Thr Leu Gly Ser Ala Trp Ser Ala Asp Ala Val Lys Arg Ile Val Asp
850 855 860
Pro Glu Ile Tyr Leu Ala Met Lys Asp Ala Leu Gly Lys Ser Lys Val
865 870 875 880
Leu Pro Glu Asp Ser Ala Arg Thr Leu Glu Leu Ser Asp Gly Arg Tyr
885 890 895
Leu Glu Ala Asp Asp Glu Val Leu Phe Phe Pro Lys Asn Ala Ala Ser
900 905 910
Ile Leu Thr Pro Arg Gly Val Ala Glu Ile Gly Gly Ser Ile His His
915 920 925
Ala Arg Leu Tyr Ser Trp Leu Thr Lys Lys Gly Glu Leu Lys Ile Gly
930 935 940
Met Leu Arg Val Tyr Gly Ala Glu Phe Pro Trp Leu Met Arg Glu Ser
945 950 955 960
Gly Ser His Asp Val Leu Arg Met Pro Ile His Pro Gly Ser Gln Ser
965 970 975
Phe Arg Asp Met Gln Asp Thr Thr Arg Lys Ala Val Glu Ser Ser Glu
980 985 990
Ala Val Glu Phe Ala Trp Ile Thr Gln Asn Asp Glu Leu Glu Phe Glu
995 1000 1005
Pro Glu Asp Tyr Ile Ala His Gly Gly Lys Asp Glu Leu Arg Gln
1010 1015 1020
Phe Leu Glu Phe Met Pro Glu Cys Arg Trp Arg Val Asp Gly Phe
1025 1030 1035
Lys Lys Asn Tyr Gln Ile Arg Ile Arg Pro Ala Met Leu Ser Arg
1040 1045 1050
Glu Gln Leu Pro Ser Asp Ile Gln Arg Arg Leu Glu Ser Lys Thr
1055 1060 1065
Leu Thr Glu Asn Glu Ser Leu Leu Leu Lys Ala Leu Asp Thr Gly
1070 1075 1080
Leu Val Val Ala Ile Gly Gly Leu Leu Pro Leu Gly Thr Leu Lys
1085 1090 1095
Val Ile Arg Arg Asn Asn Leu Gly Phe Pro Arg Trp Arg Gly Asn
1100 1105 1110
Gly Asn Leu Pro Thr Ser Phe Glu Val Arg Ser Ser Ala Leu Arg
1115 1120 1125
Ala Leu Gly Val Glu Gly
1130
<210> 13
<211> 1039
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_4-2 chimera
<400> 13
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Val Ala Ile Ala Leu Thr Asp Pro Ala Ala
740 745 750
Leu Lys Ser Ile Ser Gln Ala Ala Ser Asp Glu Arg Arg Gly Gly Arg
755 760 765
Val Ser Phe Gly Ala Val Ala Leu Pro Trp Val Asp Phe Ile Gly Asp
770 775 780
Val Gln Ala Ala Ile Glu Ala Ile Asn Val Ser His Arg Pro Ser Arg
785 790 795 800
Lys Val Asn Gly Ala Leu His Glu Glu Thr Phe Tyr Gly Pro Arg Gly
805 810 815
Met Asp Gly Asp Gly Arg Pro Thr Gly Tyr Val Gln Arg Lys Pro Val
820 825 830
Glu Arg Leu Ser Ala Lys Glu Ile Pro Asn Ile Pro Asp Pro Ala Val
835 840 845
Arg Glu Ala Val Gln Ala Lys Leu Asp Glu Val Gly Gly Thr Pro Ala
850 855 860
Gln Ala Phe Lys Asp Pro Ala Asn His Pro Val Arg Lys Arg Gly Ile
865 870 875 880
Pro Val His Lys Val Arg Leu Arg Leu Asn Ile Asn Pro Val Gln Val
885 890 895
Gly Ser Gly Ala Thr Glu Arg His Val Leu Thr Gly Ser Asn His His
900 905 910
Met Glu Ile Ile Glu Val Arg Asp Ala Lys Gly Gly Lys Lys Trp Thr
915 920 925
Gly Arg Leu Val His Arg Leu Glu Ala Lys Arg Arg Ala Leu Gly Arg
930 935 940
Glu Thr Ile Val Asp Arg Ala Val Gln Ala Gly Arg Gln Phe Gln Phe
945 950 955 960
Ser Leu Ser Pro Gly Asp Met Ile Glu Leu Thr Gly Glu Asp Gly Glu
965 970 975
Arg Lys Leu His Val Val Arg Ser Ile Ser Glu Gly Arg Ile Glu Tyr
980 985 990
Val Asp Ala Arg Asp Ala Arg Lys Lys Ala Asp Ile Arg Ala Ser Gly
995 1000 1005
Asp Trp Arg Lys Pro Ala Val Gly Ser Leu Leu Arg Leu His Cys
1010 1015 1020
Arg Lys Val Val Val Thr Pro Phe Gly Glu Ile Arg Tyr Ala Asn
1025 1030 1035
Asp
<210> 14
<211> 1051
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_4-5 chimera
<400> 14
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Val Val Ile Ala Leu Thr Gly Pro Gly Thr
740 745 750
Val Gln Ala Leu Thr Arg Ala Ala Leu Arg Ala Lys Glu Leu Gly Arg
755 760 765
Arg Leu Phe Val Pro Leu Asp Pro Pro Trp Ala Asp Arg Asp Ser Phe
770 775 780
Leu Arg Asp Val Arg Ala Ser Val Glu Ala Ile Thr Val Ser Tyr Arg
785 790 795 800
Val Asp Arg Lys Val Ser Gly Gln Leu His Glu Glu Ser Asn Tyr Ser
805 810 815
Lys Pro His Met Thr Val Asp Asn Lys Gly Asn Leu Val Glu His Arg
820 825 830
His Ile Arg Lys Pro Leu Lys Asp Met Ser Val Glu Glu Val Glu Ala
835 840 845
Ile Val Asp Asp Arg Val Arg Lys Leu Val Gln Glu Lys Leu Arg Gln
850 855 860
Leu Gly Gln Glu Pro Lys Lys Ala Phe Ala Asp Glu Ala Asn His Pro
865 870 875 880
Tyr Phe Thr Thr Ala Asp Gly Arg Leu Val Pro Ile His Lys Ala Arg
885 890 895
Ile Arg Lys Thr Val Ala Thr Ile Thr Val Gly Pro Pro Gln Cys Pro
900 905 910
Arg His Val Ala Pro Gly Leu Asn His His Ile Glu Ile Leu Ala Val
915 920 925
Arg Asp Pro Ala Gly Ala Val Thr His Trp Glu Gly Glu Leu Val Ser
930 935 940
Leu Phe Glu Ala Ala Arg Arg Val Lys Ala Gly Glu Pro Val Val Arg
945 950 955 960
Arg Asn His Gly Pro Asn Lys Asp Phe Leu Phe Ser Leu Ala Lys Gly
965 970 975
Glu Tyr Val Glu Met Glu Leu Gln Pro Gly Lys Arg Gln Leu Phe Arg
980 985 990
Val Thr Val Ile Ser Ala Lys Gln Ile Glu Phe Arg Leu His His Asp
995 1000 1005
Ala Arg Pro Thr Met Leu Leu Arg Lys Thr Pro Gly Ala Arg Val
1010 1015 1020
Ile Arg Ser Pro Gly Ser Leu Phe Lys Ala Lys Ala Arg Lys Val
1025 1030 1035
Ala Val Asp Pro Leu Gly Asn Val Phe Pro Ala Asn Asp
1040 1045 1050
<210> 15
<211> 1061
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_6-3 chimeras
<400> 15
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ile Val Val Ala Phe Thr Asn Arg Ser Thr
740 745 750
Leu Lys Arg Leu Ser Asp Glu Asn Lys Arg Ile Gly Thr Ala Glu Trp
755 760 765
Met Asp Ala Asp Glu Ser Gly Arg Ala Thr Asn Asp Glu Ile Lys Arg
770 775 780
Arg Leu Gly Gly Arg Ile Asp Leu Ser Glu Pro Trp Pro Thr Phe Arg
785 790 795 800
Asn Asp Val Glu Val Ser Ile Asn Asn Ile Thr Val Ser His Arg Val
805 810 815
Asn Arg Lys Val Ser Gly Ala Leu His Glu Glu Thr Tyr Tyr Gly Pro
820 825 830
Thr Asp Glu Pro Ala Pro Lys Asn Lys Glu Met Met Val Leu Arg Lys
835 840 845
Ser Val His Gln Leu Ser Lys Lys Asp Leu Gly Leu Ile Arg Asp Glu
850 855 860
Thr Ile Arg Gln Ile Val Asn Asp Glu Val Gln Lys Arg Met Asp Asn
865 870 875 880
Gly Glu Ser Gln Ala Asn Ala Ile Ala Ser Leu Glu Ala Asp Pro Pro
885 890 895
Phe Ile Ile Ser Pro Lys Ala Lys Val Pro Ile Arg Lys Val Arg Leu
900 905 910
Leu Met Lys Lys Asp Pro Gln Ile Met His Tyr Phe Glu Asn Lys Asn
915 920 925
Gly Glu Glu Asp Arg Ala Ala Leu Tyr Gly Asn Asn His His Ile Ala
930 935 940
Ile Tyr Glu Thr Ser Asp Lys Asn Gly Val Lys Lys Gln Ile Gly Ile
945 950 955 960
Val Ile Pro Met Met Glu Ala Ala Arg Arg Val Lys Asp Gly Asp Pro
965 970 975
Ile Val Met Lys Asp Tyr Arg Pro Asp His Thr Phe Leu Tyr Ser Leu
980 985 990
Ala Lys Asn Asp Met Ile Phe Asn His Glu Asp Glu Gln Ile Tyr Arg
995 1000 1005
Val Gln Lys Ile Asn Ser Asp Gly Thr Ile Met Phe Arg Gln Asn
1010 1015 1020
Asn Val Ala Met Lys Gly Gln Ser Asp Pro Gly Val Tyr Phe Lys
1025 1030 1035
Ser Gly Ser Arg Leu Gly Ala Ser Lys Ile Lys Ile Ser Pro Ile
1040 1045 1050
Gly Glu Ile Phe Pro Ala Asn Asp
1055 1060
<210> 16
<211> 990
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_14-1 chimera
<400> 16
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Cys Val Ile Ala Ala Cys Ser Pro Ser Leu
740 745 750
Val Ile Lys Thr Ala Arg Ile Asn Gln Glu Thr His Trp Ser Ile Thr
755 760 765
Arg Gly Met Asn Glu Thr Gln Arg Arg Asp Ala Ile Met Lys Ala Leu
770 775 780
Glu Ser Val Met Pro Trp Glu Thr Phe Ala Asn Glu Val Arg Ala Ala
785 790 795 800
His Asp Phe Val Val Pro Thr Arg Phe Val Pro Arg Lys Gly Lys Gly
805 810 815
Glu Leu Phe Glu Gln Thr Val Tyr Arg Tyr Ala Gly Val Asn Ala Gln
820 825 830
Gly Lys Asp Ile Ala Arg Lys Ala Ser Ser Asp Lys Asp Ile Val Met
835 840 845
Gly Asn Ala Val Val Ser Ala Asp Glu Lys Ser Val Ile Lys Val Ser
850 855 860
Glu Met Leu Cys Leu Arg Leu Trp His Asp Pro Glu Ala Lys Lys Gly
865 870 875 880
Gln Gly Ala Trp Tyr Ala Asp Pro Val Tyr Lys Ala Asp Ile Pro Ala
885 890 895
Leu Lys Asp Gly Thr Tyr Val Pro Arg Ile Ala Lys Ala His Thr Gly
900 905 910
Arg Lys Ala Trp Lys Pro Val Pro Glu Ser Ala Met Ala Lys Pro Pro
915 920 925
Leu Glu Ile Tyr Phe Gly Asp Leu Val Gln Ile Gly Asp Phe Ile Gly
930 935 940
Arg Phe Ser Gly Tyr Asn Ile Asn Asn Ala Asn Trp Ser Phe Thr Asp
945 950 955 960
Arg Leu Thr Arg Leu Asn Leu Ser Cys Pro Thr Val Gly Gln Leu Asn
965 970 975
Asn Asp Leu Ser Pro Val Val Ile Arg Glu Ser Pro Ile Lys
980 985 990
<210> 17
<211> 1096
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_15-1 chimera
<400> 17
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Val Ile Ile Ala Cys Ala Thr Gln Gly Ile
740 745 750
Val Asn Lys Val Ser Arg Tyr Ser Lys Ser Arg Glu Leu Trp Asp Tyr
755 760 765
Glu Val Asp Met Glu Thr Gly Glu Val Leu Gln Lys Lys Asn Lys Asn
770 775 780
Thr Lys Asp Val Phe Pro Glu Pro Trp Leu Asn Phe Arg Tyr Glu Leu
785 790 795 800
Glu Gln Lys Val Arg Val Arg Pro Leu Asp Ile Pro Glu Thr Ala Asp
805 810 815
Ile Thr Glu Met Glu Glu Pro Phe Val Ser His Met Pro Asn Arg Lys
820 825 830
Ile His Gly Pro Ala His Lys Glu Thr Ile Arg Ser Gly Arg Leu Lys
835 840 845
Glu Glu Gly Tyr Thr Ile Ser Lys Thr Ala Leu Ile Asp Leu Lys Leu
850 855 860
Thr Glu Asp Lys Glu Glu Ile Lys Gly Tyr Tyr Asn Lys Glu Ser Asp
865 870 875 880
Arg Leu Leu Tyr Glu Ala Leu Lys Lys Gln Leu Gln Arg Tyr Gly Gly
885 890 895
Lys Ala Lys Glu Ala Phe Lys Glu Pro Phe His Lys Pro Lys Ala Asp
900 905 910
Gly Thr Pro Gly Pro Ile Val Asn Lys Val Lys Ile Met Glu Lys Ser
915 920 925
Thr Met Leu Ile Pro Val Asn Gly Gly Lys Gly Leu Ala Ser Asn Gly
930 935 940
Asn Met Val Arg Ile Asp Val Phe Arg Ala Glu Glu Lys Gly Lys Lys
945 950 955 960
Lys Tyr Tyr Phe Ile Pro Val Tyr Val Ala Asp Thr Val Lys Glu Glu
965 970 975
Leu Pro Asn Arg Ala Val Leu Ala His Lys Pro Tyr Glu Ala Trp Lys
980 985 990
Ile Met Lys Glu Glu Asn Phe Ile Phe Ser Leu Tyr Pro Asn Asp Leu
995 1000 1005
Ile Phe Val Asp Ala Gly Lys Glu Ile Pro Phe Lys Ala Ala Leu
1010 1015 1020
Lys Gly Ser Thr Leu Asp Pro Glu Lys Lys Ala Ser Arg Phe Leu
1025 1030 1035
Met Tyr Tyr Lys Gly Ala Asp Ile Ala Thr Gly Ser Ile Ser Gly
1040 1045 1050
Val Asn His Asp Glu Thr Tyr Lys Ala Arg Gly Val Gly Ile Gln
1055 1060 1065
Ser Leu Arg Glu Ile Lys Lys Cys Cys Ile Asp Val Leu Gly Asn
1070 1075 1080
Ile Ser Phe Ala Ser Lys Glu Lys Arg Gln Thr Phe Arg
1085 1090 1095
<210> 18
<211> 1110
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_16-1 chimera
<400> 18
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Leu Thr Val Ala Leu Thr Arg Gln Ser Tyr
740 745 750
Ile Gln Arg Leu Asn Thr Leu Glu Ala Ser His Glu His Met Glu Lys
755 760 765
Leu Val Lys Glu Ala Asn Thr Pro Tyr Lys Glu Lys Lys Ser Leu Leu
770 775 780
Glu Lys Trp Val Ala Leu Gln Pro His Phe Ser Val Glu Glu Val Thr
785 790 795 800
Thr Gln Val Asp Gly Ile Leu Val Ser Phe Arg Ala Gly Lys Arg Val
805 810 815
Thr Thr Pro Ala Arg Arg Ala Val Tyr His Gly Gly Lys Arg Thr Ile
820 825 830
Val Gln Arg Gly Ile Gln Val Pro Arg Gly Ala Leu Thr Glu Asp Thr
835 840 845
Ile Tyr Gly Lys Leu Gly Asp Lys Phe Val Val Lys Tyr Ala Leu Asp
850 855 860
His Pro Ser Met Lys Pro Glu Asn Ile Val Asp Pro Thr Ile Arg Leu
865 870 875 880
Leu Val Glu Asn Arg Ile Thr Ala Leu Gly Lys Lys Asp Ala Phe Lys
885 890 895
Thr Pro Leu Tyr Ser Ala Glu Gly Met Glu Ile Lys Ser Val Arg Cys
900 905 910
Tyr Thr Ser Leu Ser Glu Lys Gly Val Val Pro Ile Lys Tyr Asn Glu
915 920 925
Lys Gly Asn Ala Ile Gly Phe Ala Lys Lys Gly Asn Asn His His Val
930 935 940
Ala Ile Tyr Lys Asp Gln Ser Gly Gln Tyr Gln Glu Met Val Val Ser
945 950 955 960
Phe Trp Asp Ala Val Glu Arg Lys Leu Tyr Gly Val Pro Thr Val Ile
965 970 975
Thr Asn Pro Lys Thr Val Trp Asp Glu Leu Leu Glu Lys Glu Leu Pro
980 985 990
Gln Asp Phe Leu Glu Lys Leu Pro Lys Asp Asn Trp Gln Tyr Val Leu
995 1000 1005
Ser Met Gln Glu Asn Glu Met Phe Val Leu Gly Met Glu Glu Asp
1010 1015 1020
Glu Phe Asn Asp Ala Ile Asp Thr Gln Asp Tyr Asn Thr Leu Asn
1025 1030 1035
Lys His Leu Tyr Arg Val Gln Lys Leu Ser His Ala Asp Tyr Thr
1040 1045 1050
Phe Arg Phe His Thr Glu Thr Lys Val Asp Asp Lys Tyr Asp Gly
1055 1060 1065
Val Glu Asn Gly Arg Asn Thr Ser Met Ser Leu Lys Ala Leu Val
1070 1075 1080
Arg Ile Arg Ser Phe Asn Gly Leu Phe Thr Gln Phe Pro His Lys
1085 1090 1095
Val Lys Ile Asp Ile Met Gly Arg Ile Thr Lys Ala
1100 1105 1110
<210> 19
<211> 1174
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_16-2 chimera
<400> 19
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Leu Val Val Ala Cys Thr Lys Gln Ser Tyr
740 745 750
Ile Gln Arg Leu Asn Asn Leu Asn Thr Glu Arg Asp Ala Met Tyr Gln
755 760 765
Asp Ile Glu Ala Gln Ser Val Glu Trp Lys Glu Lys His Ser Leu Leu
770 775 780
Glu Lys Trp Ile Lys Leu Gln Pro His Pro Thr Val Ser Glu Val Thr
785 790 795 800
Asp Lys Val Asp Glu Ile Leu Val Ser Phe Lys Ala Gly Lys Arg Val
805 810 815
Ala Thr Leu Gly Lys Arg Ser Val Tyr Lys Asn Gly Lys Lys Thr Val
820 825 830
Val Gln Asn Asn Ile Ile Val Pro Arg Gly Ala Leu Cys Glu Glu Ser
835 840 845
Val Tyr Gly Gln Ile Asn Leu Ile Glu Lys Asn Lys Pro Ile Lys Tyr
850 855 860
Leu Phe Glu Asn Pro Ser Leu Ile Phe Lys Pro Tyr Ile Lys Ala Leu
865 870 875 880
Val Glu Glu Arg Leu Lys Glu Tyr Asn Gly Asp Thr Ser Lys Ala Ile
885 890 895
Ser Ser Leu Lys Asn Asn Pro Ile Tyr Leu Arg Lys Asp Lys Ser Val
900 905 910
Val Leu Glu Tyr Gly Thr Cys Tyr Lys Lys Glu Tyr Val Lys Lys Tyr
915 920 925
Ser Leu Asn Ser Ile Lys Ala Lys Asp Val Asp Ser Ile Ile Asp Lys
930 935 940
His Ile Arg Glu Val Val Arg Gln Arg Leu Glu Asp Asn Asn Asn Asn
945 950 955 960
Glu Lys Ala Ala Phe Ala Ser Pro Leu Tyr Ala Asp Lys Gln Lys Gln
965 970 975
Ile Pro Ile Lys Ser Val Arg Cys Thr Thr Gly Ile Asn Ile Ala Ala
980 985 990
Pro Val Asn Tyr Asn Glu Ser Asn Asp Pro Ile Ser Phe Val Lys Pro
995 1000 1005
Gly Asn Asn His His Ile Ala Ile Tyr Lys Asp Lys Asp Gly Lys
1010 1015 1020
Arg Gln Glu His Ile Val Thr Phe Trp His Ala Val Glu Arg Lys
1025 1030 1035
Lys Tyr Gly Met Pro Val Val Ile Thr Asn Pro Lys Glu Ile Trp
1040 1045 1050
Asp Leu Ile Ile Glu Lys Ser Leu Asp Leu Pro Glu Ser Phe Leu
1055 1060 1065
Asn Cys Leu Pro Asn Ser Asp Trp Asn Tyr Glu Ile Ser Met Gln
1070 1075 1080
Gln Asn Glu Met Phe Val Met Gly Met Ser Glu Asp Glu Phe Gln
1085 1090 1095
Asp Ala Ile Arg Asn Asn Asp Tyr Lys Thr Leu Asn Lys Tyr Leu
1100 1105 1110
Tyr Arg Val Gln Ser Val Ser Glu Ser Asp Tyr Trp Leu Arg Leu
1115 1120 1125
His Ile Glu Thr Met Asn Asp Lys Thr Pro Glu Gly Asn Ile Ile
1130 1135 1140
Lys Lys Tyr Tyr Arg Ile Lys Ser Ile Asn Thr Phe Phe Asn Phe
1145 1150 1155
Asn Pro His Lys Val Lys Ile Thr Leu Leu Gly Glu Ile Gln Ser
1160 1165 1170
Ser
<210> 20
<211> 1094
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_18-1 chimera
<400> 20
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Tyr Leu Asn Ala Val Val Gly Asn Val Tyr
740 745 750
His Glu Lys Phe Thr Lys Asn Pro Leu Arg Phe Val Arg Ser Gly Gln
755 760 765
Glu Tyr Ser Leu Asn Leu Ser Ala Leu Phe Gln Asn Trp Asn Ile Tyr
770 775 780
Lys Gly Gly Arg Val Ile Trp Gln Lys Gly Glu Asp Gly Ser Leu Glu
785 790 795 800
Thr Val Arg Ala Arg Met Ala Lys Asn Asp Pro Met Val Thr Arg Tyr
805 810 815
Cys Thr Glu Gly Arg Gly Ala Leu Tyr Asp Leu Gln Pro Met Lys Lys
820 825 830
Ser Lys Gly Gln Leu Pro Leu Lys Ser Ser Asp Glu Arg Leu Gln His
835 840 845
Ile Asp Arg Tyr Gly Gly Tyr Asn Lys Leu Ala Gly Ala Tyr Phe Thr
850 855 860
Leu Ala Ala Tyr Tyr Lys Lys Gly Lys Arg Val Lys Ser Ile Glu Ser
865 870 875 880
Val Pro Leu Tyr Leu Ala Ala Lys Leu Gln Arg Asp Pro Ala Ala Leu
885 890 895
Gln Gln Tyr Leu Ala Asp Gln Leu Gly Thr Asp Arg Val Glu Ile Leu
900 905 910
Val Pro Glu Ile Lys Leu Gly Thr Leu Phe Lys Trp Asn Gly Tyr Pro
915 920 925
Met Thr Leu Ser Gly Arg Thr Gly Pro Gln Leu Leu Phe Arg Asn Ala
930 935 940
Ala Glu Leu Arg Thr Asn Ala Glu Gln Glu Gln Tyr Ile Lys Lys Met
945 950 955 960
Ser Arg Tyr Leu Glu Lys Cys Lys Gly Arg Lys Glu Pro Leu Pro Ile
965 970 975
Arg Pro Ala Tyr Asp Lys Leu Thr Pro Glu Glu Asn Leu Gln Leu Tyr
980 985 990
Asp Ala Phe Thr Gln Trp Leu Thr Ser Gly Ile Tyr Ala Lys Arg Leu
995 1000 1005
Ser Leu Gln Gly Lys Phe Leu Leu Glu Lys Arg Asp Ala Phe Ala
1010 1015 1020
Ala Leu Ser Pro Glu Ala Gln Val Arg Gln Leu Met Glu Ile Leu
1025 1030 1035
His Leu Phe Gln Cys Asn Pro Val Ala Ala Asn Leu Ser Glu Leu
1040 1045 1050
Gly Gly Ala Ala His Ala Gly Ile Leu Leu Ala Ser Lys Asn Ile
1055 1060 1065
Asp Gly Lys Val Pro Val Ser Ile Val His Gln Ser Val Thr Gly
1070 1075 1080
Tyr Phe Thr Gln Glu Val Cys Leu Asn Asp Leu
1085 1090
<210> 21
<211> 1101
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_21-1 chimera
<400> 21
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ala Val Ile Ala Cys Ile Thr Pro Gly Met
740 745 750
Ile Gln Lys Ile Thr Lys Tyr Ala Gln Asn His Glu Arg Phe Tyr Ala
755 760 765
Thr Ala Lys Gly Tyr Val Asp Ile Glu Thr Gly Glu Val Leu Thr Arg
770 775 780
Ser Glu Tyr Glu Ala Met Asp Asp Ile Arg Phe Pro Glu Pro Trp Pro
785 790 795 800
Gly Phe Arg Ser Glu Leu Glu Ala Arg Val Ser Glu His Pro Gln Glu
805 810 815
Ala Ile Ala Arg Leu Lys Leu Pro His Tyr Glu Asn Ser Glu Glu Ile
820 825 830
Arg Pro Ile Phe Val Ser Arg Met Pro Asn His Lys Val Thr Gly Ala
835 840 845
Ala His Leu Glu Thr Ile Arg Ser Lys Lys Gly Gly Ala Gly Ser Thr
850 855 860
Val Thr Lys Thr Ala Leu Pro Asp Leu Lys Leu Asp Lys Asn Gly Glu
865 870 875 880
Ile Ala Gly Tyr Tyr Arg Lys Glu Asp Asp Pro Leu Leu Tyr Glu Ala
885 890 895
Leu Lys Ala Arg Leu Lys Ala Phe Gly Gly Asp Gly Lys Lys Ala Phe
900 905 910
Ala Glu Pro Phe His Lys Pro Lys His Asn Gly Glu Pro Gly Pro Ile
915 920 925
Val Lys Lys Val Lys Ile Gln Glu Ser Ala Thr Leu Thr Val Pro Val
930 935 940
Asn His Gly Ile Ala Ala Asn Gly Ser Met Val Arg Leu Asp Val Phe
945 950 955 960
His Val Asp Gly Asp Gly Tyr Tyr Phe Val Pro Ile Tyr Thr Ser Asp
965 970 975
Thr Val Lys Pro Glu Leu Pro Asn Arg Ala Val Val Ala Gly Arg Arg
980 985 990
Val Gln Glu Trp Lys Val Met Asp Asp Ser Tyr Phe Lys Phe Ser Leu
995 1000 1005
Tyr Pro Lys Asp Leu Ile Arg Ile Arg Ser Lys Lys Gly Ile Lys
1010 1015 1020
Leu Lys Ala Val Asn Arg Asn Ala Asp Leu Gln Glu Tyr Ser Thr
1025 1030 1035
Asn Asp Cys Leu Cys Tyr Phe Val Lys Phe Asn Ile Ser Thr Gly
1040 1045 1050
Ala Leu Ser Val Glu Asn His Asp Arg Lys Phe Glu Gln Pro Gly
1055 1060 1065
Leu Gly Gly Lys Thr Leu Leu Ser Ile Glu Lys Tyr Gln Val Asp
1070 1075 1080
Val Leu Gly Asn Tyr Ser Pro Val Ala Leu Pro Glu Lys Arg Met
1085 1090 1095
Lys Phe Arg
1100
<210> 22
<211> 1172
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_22-2 chimera
<400> 22
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ile Ala Ile Ala Cys Ile Asn Arg Ser Ile
740 745 750
Val Asn Tyr Leu Asn Asn Ala Ala Ala Asn Gln Thr Glu Arg Glu Asp
755 760 765
Leu Arg Arg Ala Val Cys Ile Pro Glu Arg Asn Gly Gln Thr Lys Arg
770 775 780
Gln Leu Arg Ser Pro Trp His Cys Phe Ala Arg Asp Ala Glu Asn Ala
785 790 795 800
Leu Arg Gln Ile Val Val Ser Phe Lys Gln Asn Leu Arg Val Ala Thr
805 810 815
Lys Ala Thr Asn Ser Tyr Glu Cys Phe Asp Thr Ala Ser Gly Lys Lys
820 825 830
Ile Arg Lys His Gln Ser Asn Arg Glu His Tyr Ala Ile Arg Lys Pro
835 840 845
Leu His Lys Asp Ser Val Tyr Gly Glu Val Ile Leu Thr Ser Ile Ala
850 855 860
Ser Val Asn Leu Lys Lys Ala Leu Leu Lys Ala Glu Arg Ile Leu Asp
865 870 875 880
Lys Arg Leu Lys Glu Lys Ile Phe Glu Leu Arg Lys Leu Tyr Asn Tyr
885 890 895
Ser Asn Lys Gln Ile Glu Glu His Leu Thr Lys Val Cys Ile Asn Cys
900 905 910
Pro Glu Trp Lys Asn Tyr Asp Phe Lys Lys Ile Ala Val Arg Ile Leu
915 920 925
Ser Asn Asp Ala Asp Ala Thr His Ile Val Ala Ile Arg Lys Pro Leu
930 935 940
Asp Glu Ser Phe Asp Glu Val Lys Ile Asn Thr Ile Thr Asp Thr Gly
945 950 955 960
Ile Gln Lys Ile Leu Leu Asn His Leu Ser Arg Tyr Ala Asp Asp Pro
965 970 975
Lys Lys Ala Phe Ser Pro Glu Gly Ile Glu Asp Met Asn Ala Asn Ile
980 985 990
Ala Ser Leu Asn Gly Gly Lys Gln His Leu Pro Ile Tyr Lys Val Arg
995 1000 1005
Val Ser Glu Lys Asp Asn Gly Gly Tyr Phe Pro Ile Gly Gln Lys
1010 1015 1020
Gly Asn Arg Pro Lys Lys Tyr Val Thr Thr Ala Lys Asp Thr Asn
1025 1030 1035
Leu Phe Phe Ala Val Tyr Ala Asp Ser Lys Gly Lys Arg Ser Tyr
1040 1045 1050
Lys Thr Ile Asp Leu Arg Thr Ala Ile Glu Cys Arg Lys Gln Gly
1055 1060 1065
Leu Ser Val Ala Pro Ser Ile Asn Glu Lys Gly Asp Lys Leu Leu
1070 1075 1080
Phe Thr Leu Ser Pro Asn Asp Leu Val Tyr Met Pro Ser Glu Gly
1085 1090 1095
Glu Glu Ala Asn Gly Phe Ala Ile Asp Asn Asn Leu Asn Lys Asp
1100 1105 1110
Gln Ile Tyr Lys Met Val Ser Ala Asn Asn Lys Gln Cys Phe Phe
1115 1120 1125
Ile Pro His Thr Val Ala Asp Phe Ile Ser Arg Gly Glu Glu Tyr
1130 1135 1140
Asn Ser His Asn Lys Ile Glu Leu Thr Glu Asp Arg Arg Ser Ile
1145 1150 1155
Lys Glu His Cys Val Pro Leu Lys Val Asn Arg Leu Gly Lys
1160 1165 1170
<210> 23
<211> 1112
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_23-1 chimera
<400> 23
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Tyr Leu Asn Ile Val Val Gly Asn Thr Tyr
740 745 750
Ser Thr Lys Phe Thr Asn Asn Pro Leu Asn Phe Ile Lys Ala Gly Ala
755 760 765
Lys Arg Pro Gln Asp Asn Gln Phe Lys Tyr Asn Met Asp Lys Ile Phe
770 775 780
Asp Tyr Asn Val Ile Ser Arg Gly Glu Arg Ala Trp Ile Ala Gly Ser
785 790 795 800
Asp Gly Ser Ile Cys Thr Val Lys Lys Phe Met Ser Arg Asn Thr Val
805 810 815
Leu Ile Thr Arg Lys Ala Lys Glu Val His Gly Ala Leu Ser Asn Lys
820 825 830
Ala Thr Ile Trp Gly Lys Asn Val Ala Lys Pro Gly Ala Tyr Leu Pro
835 840 845
Val Lys Ser Thr Asp Leu Lys Ala Gln Asp Val Thr Lys Tyr Gly Gly
850 855 860
Ile Thr Ser Ile Ala Asn Ser Gly Tyr Thr Leu Ala Glu Tyr Lys Val
865 870 875 880
Asn Gly Lys Thr Thr Arg Ser Leu Glu Ala Leu Pro Val Tyr Leu Gly
885 890 895
Arg Ala Glu Gln Leu Thr Glu Lys Thr Val Val Asp Tyr Leu Ser Ser
900 905 910
Ser Leu Gln Glu Ser Ser Lys Lys Lys Ile Glu Asp Ile Gln Val Arg
915 920 925
Lys Leu Phe Ile Pro Gln Gly Ser Lys Val Lys Ile Asp Gly Phe Cys
930 935 940
Tyr Tyr Leu Gly Gly Lys Thr Gly Asp Ser Ile Tyr Leu Asn Asn Ala
945 950 955 960
Val Pro Leu Tyr Leu Ser Ser Thr Ser Glu Glu Tyr Leu Arg Lys Leu
965 970 975
Leu Lys Ala Val Glu Asn Asn Asn Tyr Asn Glu Arg Asp Lys Asn Gly
980 985 990
Gln Ile Ile Leu Thr Ala Pro Lys Asn Val Gln Leu Leu Ser Ser Ile
995 1000 1005
Phe Asp Lys Leu Arg Ser Lys Pro Phe Ser Asn Asn Lys Trp Asn
1010 1015 1020
Ile Tyr Phe Ser Ile Val Asn Gly Lys Glu Thr Lys Val Glu Gln
1025 1030 1035
Leu Phe Ser Lys Leu Ser Ile Asp Lys Gln Ala Glu Val Ile Ser
1040 1045 1050
Gln Ile Val Ile Trp Ile Asn Ser Ser Arg Gln Asn Val Asn Leu
1055 1060 1065
Ser Leu Ile Gly Gly Ser Ala His Ser Gly Thr Gln Ala Leu Ser
1070 1075 1080
Lys Thr Val Ser Arg Leu Asn Glu Cys Met Leu Ile Ser Gln Ser
1085 1090 1095
Ile Thr Gly Ile Tyr Glu His Ser Val Asp Leu Leu Thr Ile
1100 1105 1110
<210> 24
<211> 1090
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_SaCas9 chimeras
<400> 24
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Leu Ile Ile Ala Asn Ala Asp Phe Ile Phe
740 745 750
Lys Glu Trp Lys Lys Leu Asp Lys Ala Lys Lys Val Met Glu Asn Gln
755 760 765
Met Phe Glu Glu Lys Gln Ala Glu Ser Met Pro Glu Ile Glu Thr Glu
770 775 780
Gln Glu Tyr Lys Glu Ile Phe Ile Thr Pro His Gln Ile Lys His Ile
785 790 795 800
Lys Asp Phe Lys Asp Tyr Lys Tyr Ser His Arg Val Asp Lys Lys Pro
805 810 815
Asn Arg Glu Leu Ile Asn Asp Thr Leu Tyr Ser Thr Arg Lys Asp Asp
820 825 830
Lys Gly Asn Thr Leu Ile Val Asn Asn Leu Asn Gly Leu Tyr Asp Lys
835 840 845
Asp Asn Asp Lys Leu Lys Lys Leu Ile Asn Lys Ser Pro Glu Lys Leu
850 855 860
Leu Met Tyr His His Asp Pro Gln Thr Tyr Gln Lys Leu Lys Leu Ile
865 870 875 880
Met Glu Gln Tyr Gly Asp Glu Lys Asn Pro Leu Tyr Lys Tyr Tyr Glu
885 890 895
Glu Thr Gly Asn Tyr Leu Thr Lys Tyr Ser Lys Lys Asp Asn Gly Pro
900 905 910
Val Ile Lys Lys Ile Lys Tyr Tyr Gly Asn Lys Leu Asn Ala His Leu
915 920 925
Asp Ile Thr Asp Asp Tyr Pro Asn Ser Arg Asn Lys Val Val Lys Leu
930 935 940
Ser Leu Lys Pro Tyr Arg Phe Asp Val Tyr Leu Asp Asn Gly Val Tyr
945 950 955 960
Lys Phe Val Thr Val Lys Asn Leu Asp Val Ile Lys Lys Glu Asn Tyr
965 970 975
Tyr Glu Val Asn Ser Lys Cys Tyr Glu Glu Ala Lys Lys Leu Lys Lys
980 985 990
Ile Ser Asn Gln Ala Glu Phe Ile Ala Ser Phe Tyr Asn Asn Asp Leu
995 1000 1005
Ile Lys Ile Asn Gly Glu Leu Tyr Arg Val Ile Gly Val Asn Asn
1010 1015 1020
Asp Leu Leu Asn Arg Ile Glu Val Asn Met Ile Asp Ile Thr Tyr
1025 1030 1035
Arg Glu Tyr Leu Glu Asn Met Asn Asp Lys Arg Pro Pro Arg Ile
1040 1045 1050
Ile Lys Thr Ile Ala Ser Lys Thr Gln Ser Ile Lys Lys Tyr Ser
1055 1060 1065
Thr Asp Ile Leu Gly Asn Leu Tyr Glu Val Lys Ser Lys Lys His
1070 1075 1080
Pro Gln Ile Ile Lys Lys Gly
1085 1090
<210> 25
<211> 1123
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_SpCas9 chimeras
<400> 25
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Tyr Leu Asn Ala Val Val Gly Thr Ala Leu
740 745 750
Ile Lys Lys Tyr Pro Lys Leu Glu Ser Glu Phe Val Tyr Gly Asp Tyr
755 760 765
Lys Val Tyr Asp Val Arg Lys Met Ile Ala Lys Ser Glu Gln Glu Ile
770 775 780
Gly Lys Ala Thr Ala Lys Tyr Phe Phe Tyr Ser Asn Ile Met Asn Phe
785 790 795 800
Phe Lys Thr Glu Ile Thr Leu Ala Asn Gly Glu Ile Arg Lys Arg Pro
805 810 815
Leu Ile Glu Thr Asn Gly Glu Thr Gly Glu Ile Val Trp Asp Lys Gly
820 825 830
Arg Asp Phe Ala Thr Val Arg Lys Val Leu Ser Met Pro Gln Val Asn
835 840 845
Ile Val Lys Lys Thr Glu Val Gln Thr Gly Gly Phe Ser Lys Glu Ser
850 855 860
Ile Leu Pro Lys Arg Asn Ser Asp Lys Leu Ile Ala Arg Lys Lys Asp
865 870 875 880
Trp Asp Pro Lys Lys Tyr Gly Gly Phe Asp Ser Pro Thr Val Ala Tyr
885 890 895
Ser Val Leu Val Val Ala Lys Val Glu Lys Gly Lys Ser Lys Lys Leu
900 905 910
Lys Ser Val Lys Glu Leu Leu Gly Ile Thr Ile Met Glu Arg Ser Ser
915 920 925
Phe Glu Lys Asn Pro Ile Asp Phe Leu Glu Ala Lys Gly Tyr Lys Glu
930 935 940
Val Lys Lys Asp Leu Ile Ile Lys Leu Pro Lys Tyr Ser Leu Phe Glu
945 950 955 960
Leu Glu Asn Gly Arg Lys Arg Met Leu Ala Ser Ala Gly Glu Leu Gln
965 970 975
Lys Gly Asn Glu Leu Ala Leu Pro Ser Lys Tyr Val Asn Phe Leu Tyr
980 985 990
Leu Ala Ser His Tyr Glu Lys Leu Lys Gly Ser Pro Glu Asp Asn Glu
995 1000 1005
Gln Lys Gln Leu Phe Val Glu Gln His Lys His Tyr Leu Asp Glu
1010 1015 1020
Ile Ile Glu Gln Ile Ser Glu Phe Ser Lys Arg Val Ile Leu Ala
1025 1030 1035
Asp Ala Asn Leu Asp Lys Val Leu Ser Ala Tyr Asn Lys His Arg
1040 1045 1050
Asp Lys Pro Ile Arg Glu Gln Ala Glu Asn Ile Ile His Leu Phe
1055 1060 1065
Thr Leu Thr Asn Leu Gly Ala Pro Ala Ala Phe Lys Tyr Phe Asp
1070 1075 1080
Thr Thr Ile Asp Arg Lys Arg Tyr Thr Ser Thr Lys Glu Val Leu
1085 1090 1095
Asp Ala Thr Leu Ile His Gln Ser Ile Thr Gly Leu Tyr Glu Thr
1100 1105 1110
Arg Ile Asp Leu Ser Gln Leu Gly Gly Asp
1115 1120
<210> 26
<211> 1105
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_15-1-WP chimera
<400> 26
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ala Val Met Thr Leu Leu Asn Arg Ser Val
740 745 750
Ala Leu Thr Leu Glu Gln Arg Ser Gln Leu Arg Arg Thr Phe Tyr Glu
755 760 765
Gln Gly Leu Asp Lys Leu Asp Arg Asn Gln Leu Lys Pro Glu Glu Asp
770 775 780
Trp Arg Asp Phe Thr Gly Leu Ala Pro Ala Ser Gln Glu Lys Phe Leu
785 790 795 800
Glu Trp Arg Lys Ala Ala Thr Ile Leu Gly Asp Leu Leu Ala Glu Ala
805 810 815
Ile Glu Asp Asp Ser Ile Ala Val Val Ser Pro Leu Arg Leu Arg Pro
820 825 830
Gln Asn Gly Ser Val His Leu Glu Lys Ile His Gly Pro Ala His Lys
835 840 845
Glu Thr Ile Arg Ser Gly Arg Leu Lys Glu Glu Gly Tyr Thr Ile Ser
850 855 860
Lys Thr Ala Leu Ile Asp Leu Lys Leu Thr Glu Asp Lys Glu Glu Ile
865 870 875 880
Lys Gly Tyr Tyr Asn Lys Glu Ser Asp Arg Leu Leu Tyr Glu Ala Leu
885 890 895
Lys Lys Gln Leu Gln Arg Tyr Gly Gly Lys Ala Lys Glu Ala Phe Lys
900 905 910
Glu Pro Phe His Lys Pro Lys Ala Asp Gly Thr Pro Gly Pro Ile Val
915 920 925
Asn Lys Val Lys Ile Met Glu Lys Ser Thr Met Leu Ile Pro Val Asn
930 935 940
Gly Gly Lys Gly Leu Ala Ser Asn Gly Asn Met Val Arg Ile Asp Val
945 950 955 960
Phe Arg Ala Glu Glu Lys Gly Lys Lys Lys Tyr Tyr Phe Ile Pro Val
965 970 975
Tyr Val Ala Asp Thr Val Lys Glu Glu Leu Pro Asn Arg Ala Val Leu
980 985 990
Ala His Lys Pro Tyr Glu Ala Trp Lys Ile Met Lys Glu Glu Asn Phe
995 1000 1005
Ile Phe Ser Leu Tyr Pro Asn Asp Leu Ile Phe Val Asp Ala Gly
1010 1015 1020
Lys Glu Ile Pro Phe Lys Ala Ala Leu Lys Gly Ser Thr Leu Asp
1025 1030 1035
Pro Glu Lys Lys Ala Ser Arg Phe Leu Met Tyr Tyr Lys Gly Ala
1040 1045 1050
Asp Ile Ala Thr Gly Ser Ile Ser Gly Val Asn His Asp Glu Thr
1055 1060 1065
Tyr Lys Ala Arg Gly Val Gly Ile Gln Ser Leu Arg Glu Ile Lys
1070 1075 1080
Lys Cys Cys Ile Asp Val Leu Gly Asn Ile Ser Phe Ala Ser Lys
1085 1090 1095
Glu Lys Arg Gln Thr Phe Arg
1100 1105
<210> 27
<211> 1074
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3 chimeric effector
<220>
<223> description: MG3-6_15-1-P chimeras
<400> 27
Met Ser Thr Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp
1 5 10 15
Arg Ser Val Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro
20 25 30
Ile Gln Lys Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp
35 40 45
Pro Thr Lys Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile
50 55 60
Ala Arg Arg Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg
65 70 75 80
Asn Leu Asp Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly
85 90 95
Pro Glu Pro Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala
100 105 110
Ser Ile Lys Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg
115 120 125
Ala Val Arg His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp
130 135 140
Ser Leu Asp Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe
145 150 155 160
Glu Ile Ile Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro
165 170 175
Ala Asn Pro Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu
180 185 190
Val Leu Leu Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val
195 200 205
Arg Gly Thr Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu
210 215 220
Ala Glu Leu Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr
225 230 235 240
Glu Ala Leu Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro
245 250 255
Lys Glu Arg Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr
260 265 270
Ile Arg Ala Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val
275 280 285
Ala Asn Leu Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr
290 295 300
Glu Ala Glu Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp
305 310 315 320
Lys Glu Gln Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro
325 330 335
Gly Asn Arg Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr
340 345 350
Ala Pro Tyr Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys
355 360 365
Lys Thr Glu Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu
370 375 380
Arg Ser Leu Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu
385 390 395 400
Glu Ala Ala Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro
405 410 415
Ala Glu Glu Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg
420 425 430
Val Ala Tyr Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His
435 440 445
Glu Tyr Arg Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val
450 455 460
Asp Asp Thr Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly
465 470 475 480
Gln Pro Ala Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu
485 490 495
Asp Cys Glu Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His
500 505 510
Thr Arg Thr Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn
515 520 525
Glu Gln Lys Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu
530 535 540
Arg Glu Ser Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His
545 550 555 560
Leu Ile Val Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met
565 570 575
Ile Thr Thr Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly
580 585 590
Gly Gly Ser Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys
595 600 605
Asn Ala Lys Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val
610 615 620
Lys Ser Gln Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys
625 630 635 640
Asp Ser Lys Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn
645 650 655
Gln Thr Glu Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr
660 665 670
Ser Tyr Ala Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn
675 680 685
Glu Gly Leu Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr
690 695 700
Ala Gly Ala Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu
705 710 715 720
Arg Ile Leu Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg
725 730 735
His His Ala Val Asp Ala Ala Val Met Thr Leu Leu Asn Arg Ser Val
740 745 750
Ala Leu Thr Leu Glu Gln Arg Ser Gln Leu Arg Arg Thr Phe Tyr Glu
755 760 765
Gln Gly Leu Asp Lys Leu Asp Arg Asn Gln Leu Lys Pro Glu Glu Asp
770 775 780
Trp Arg Asp Phe Thr Gly Leu Ala Pro Ala Ser Gln Glu Lys Phe Leu
785 790 795 800
Glu Trp Arg Lys Ala Ala Thr Ile Leu Gly Asp Leu Leu Ala Glu Ala
805 810 815
Ile Glu Asp Asp Ser Ile Ala Val Val Ser Pro Leu Arg Leu Arg Pro
820 825 830
Gln Asn Gly Ser Val His Leu Glu Thr Ile Ser Ala Val Lys Lys Gln
835 840 845
Thr Leu Gly Ser Asp Trp Pro Ala Asp Ala Val Lys Arg Ile Val Asp
850 855 860
Pro Glu Ile Tyr Leu Ala Met Lys Asp Ala Leu Gly Lys Leu Lys Glu
865 870 875 880
Leu Pro Glu Asp Ser Ala Arg Ser Leu Glu Leu Pro Asp Gly Arg Phe
885 890 895
Val Glu Ala Asp Asp Glu Val Leu Phe Phe Pro Glu Asn Ala Ala Ser
900 905 910
Ile Leu Thr Pro Arg Gly Val Ala Glu Ile Asn Met Val Arg Ile Asp
915 920 925
Val Phe Arg Ala Glu Glu Lys Gly Lys Lys Lys Tyr Tyr Phe Ile Pro
930 935 940
Val Tyr Val Ala Asp Thr Val Lys Glu Glu Leu Pro Asn Arg Ala Val
945 950 955 960
Leu Ala His Lys Pro Tyr Glu Ala Trp Lys Ile Met Lys Glu Glu Asn
965 970 975
Phe Ile Phe Ser Leu Tyr Pro Asn Asp Leu Ile Phe Val Asp Ala Gly
980 985 990
Lys Glu Ile Pro Phe Lys Ala Ala Leu Lys Gly Ser Thr Leu Asp Pro
995 1000 1005
Glu Lys Lys Ala Ser Arg Phe Leu Met Tyr Tyr Lys Gly Ala Asp
1010 1015 1020
Ile Ala Thr Gly Ser Ile Ser Gly Val Asn His Asp Glu Thr Tyr
1025 1030 1035
Lys Ala Arg Gly Val Gly Ile Gln Ser Leu Arg Glu Ile Lys Lys
1040 1045 1050
Cys Cys Ile Asp Val Leu Gly Asn Ile Ser Phe Ala Ser Lys Glu
1055 1060 1065
Lys Arg Gln Thr Phe Arg
1070
<210> 28
<211> 121
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG1 sgRNA
<220>
<223> description: MG1-4 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 28
nnnnnnnnnn nnnnnnnnnn nngttttgat ttactcgaaa gagtccaatc ataattgacc 60
ggagaataat tgattcctct acaatgtacg aataaattca ttctctaaac cttaaaaatt 120
t 121
<210> 29
<211> 99
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG1 sgRNA
<220>
<223> description: MG1-5 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 29
nnnnnnnnnn nnnnnnnnnn nngttttgac ttgaaaaagt cttaactgat tttgccgaat 60
tttaagctct acgtagtacc ttggaattcg gcatatttt 99
<210> 30
<211> 99
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG1 sgRNA
<220>
<223> description: MG1-6 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 30
nnnnnnnnnn nnnnnnnnnn nngttttgac ttgaaaaagt cttaactgat tttgccgaat 60
ttcaagctct gcattgcacc ttggcattcg gcatatttt 99
<210> 31
<211> 99
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG1 sgRNA
<220>
<223> description: MG1-7 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 31
nnnnnnnnnn nnnnnnnnnn nngttttgac tttgaaaaaa gtcttaactg attttgccga 60
attttaagct ctgcatggca ccttgaaatt cggcatttt 99
<210> 32
<211> 100
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG2 sgRNA
<220>
<223> description: MG2-7 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 32
nnnnnnnnnn nnnnnnnnnn nngctttgcc ttggaaacaa gacaaagtta attaaggcag 60
ttcggacctc tactttgtac gtcaggatag aaagcctttt 100
<210> 33
<211> 115
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 sgRNA
<220>
<223> description: MG3-3 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 33
nnnnnnnnnn nnnnnnnnnn nngttgggaa tcttgaaaaa gattcccaat aaggcacatt 60
tttagtgctg acttctcacc gtccagggtt cattgaacaa tgggcggtat gtttt 115
<210> 34
<211> 126
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 sgRNA
<220>
<223> description: MG3-4 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 34
nnnnnnnnnn nnnnnnnnnn nngttgagaa tctttcatta gaaataacga aagattctta 60
ataaggcgtc cttccgatgc tgacttctca ccgtccgttt tccaatagga gcgggcggta 120
tgtttt 126
<210> 35
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 sgRNA
<220>
<223> description: MG3-6 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 35
nnnnnnnnnn nnnnnnnnnn nngttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 36
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 sgRNA
<220>
<223> description: MG3-7 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 36
nnnnnnnnnn nnnnnnnnnn nngttgggaa ccgaaaggtt cccaataagg cgcatcttgg 60
cgctgacttc tcaccgtcct cttgctgctt agcagagggc ggtatgtttt 110
<210> 37
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 sgRNA
<220>
<223> description: MG3-8 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 37
nnnnnnnnnn nnnnnnnnnn nngttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc ggctcctctt aggaacgggc ggtatgtttt 110
<210> 38
<211> 124
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG4 sgRNA
<220>
<223> description: MG4-5 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 38
nnnnnnnnnn nnnnnnnnnn nngctgtggc ttgcggggga aaccccttgt cacagtaagg 60
gactttcgtt cgcgaaaggc aacctcgcca gcatcgctgg gcgaggacca gggcaaggcg 120
attt 124
<210> 39
<211> 118
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG14 sgRNA
<220>
<223> description: MG14-1 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 39
nnnnnnnnnn nnnnnnnnnn nngtcttgag cgaaagctcc agacaagggg agccacttaa 60
gtggcttacc cgtaaagtaa cccccgttca atcttcggat tgggcggggc gaactttt 118
<210> 40
<211> 118
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG15 sgRNA
<220>
<223> description: MG15-1 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 40
nnnnnnnnnn nnnnnnnnnn nngttgtaat tccctagaaa taggttatta caataaggtc 60
caacaggagt gttggtaccg taaagctcta acggcaccca cgggtgccgt tatctttt 118
<210> 41
<211> 162
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG16 sgRNA
<220>
<223> description: MG16-2 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 41
nnnnnnnnnn nnnnnnnnnn nngttgtgaa ttgctttaaa ttgaaaaatt taagcaattc 60
acaataagga ttattccgtt gtgaaaacat ttaaagcggg gtcaacagcc tcgctttctt 120
tttgagtcta tgagacatta ggtcaataag tctatgagtt tt 162
<210> 42
<211> 101
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG18 sgRNA
<220>
<223> description: MG18-1 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 42
nnnnnnnnnn nnnnnnnnnn nngtttgaga gtagtgaaaa ctacgagttc aaatacaatt 60
ttttcaaatt gccctatagg gccctcacag tgtgagattt t 101
<210> 43
<211> 117
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG21 sgRNA
<220>
<223> description: MG21-1 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 43
nnnnnnnnnn nnnnnnnnnn nngttgtagt tccccttttg aaaaaaagtg tgttactgca 60
ataaggtaaa acaccacgaa gctctgccct aactgcctta gcagttaggg catcttt 117
<210> 44
<211> 134
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG22 sgRNA
<220>
<223> description: MG22-1 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 44
nnnnnnnnnn nnnnnnnnnn nngttgtgaa ttgctttcaa attagaaata attgaaagca 60
attcgcaata aggattattc cgttgtgaaa acatttcgag tggcttcgtg aaattcacga 120
agtcacttcg tttt 134
<210> 45
<211> 113
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG23 sgRNA
<220>
<223> description: MG23-1 sgRNA
<220>
<221> modified_base
<222> (1)..(22)
<223> a, c, t, g, unknown or other
<400> 45
nnnnnnnnnn nnnnnnnnnn nngtttgaga acctgaaaag gtgagtgcaa ataaggttta 60
accgaaattg tttacctgca ttgtgcagta taagaaagac cgcgaggtct ttt 113
<210> 46
<211> 4
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG1 PAM
<220>
<223> description: MG1-4 PAM
<220>
<221> modified_base
<222> (1)..(1)
<223> a, c, t, g, unknown or other
<400> 46
nrrr 4
<210> 47
<211> 6
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG1 PAM
<220>
<223> description: MG1-5 PAM
<220>
<221> modified_base
<222> (1)..(4)
<223> a, c, t, g, unknown or other
<400> 47
nnnnyy 6
<210> 48
<211> 6
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG1 PAM
<220>
<223> description: MG1-6 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<400> 48
nnrray 6
<210> 49
<211> 7
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG1 PAM
<220>
<223> description: MG1-7 PAM
<220>
<221> modified_base
<222> (1)..(1)
<223> a, c, t, g, unknown or other
<400> 49
nrrraag 7
<210> 50
<211> 6
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG2 PAM
<220>
<223> description: MG2-7 PAM
<220>
<221> modified_base
<222> (1)..(3)
<223> a, c, t, g, unknown or other
<400> 50
nnnrta 6
<210> 51
<211> 8
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 PAM
<220>
<223> description: MG3-3 PAM
<220>
<221> modified_base
<222> (1)..(3)
<223> a, c, t, g, unknown or other
<400> 51
nnncccyr 8
<210> 52
<211> 8
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 PAM
<220>
<223> description: MG3-4 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<220>
<221> modified_base
<222> (8)..(8)
<223> a, c, t, g, unknown or other
<400> 52
nnaaaabn 8
<210> 53
<211> 7
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 PAM
<220>
<223> description: MG3-6 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<220>
<221> modified_base
<222> (6)..(6)
<223> a, c, t, g, unknown or other
<400> 53
nnrggnt 7
<210> 54
<211> 7
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 PAM
<220>
<223> description: MG3-7 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<220>
<221> modified_base
<222> (4)..(4)
<223> a, c, t, g, unknown or other
<400> 54
nnrnyay 7
<210> 55
<211> 7
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 PAM
<220>
<223> description: MG3-8 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<400> 55
nnrggty 7
<210> 56
<211> 5
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG4 PAM
<220>
<223> description: MG4-5 PAM
<220>
<221> modified_base
<222> (1)..(1)
<223> a, c, t, g, unknown or other
<400> 56
nrccv 5
<210> 57
<211> 8
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG14 PAM
<220>
<223> description: MG14-1 PAM
<220>
<221> modified_base
<222> (1)..(1)
<223> a, c, t, g, unknown or other
<220>
<221> modified_base
<222> (3)..(4)
<223> a, c, t, g, unknown or other
<400> 57
nrnngrka 8
<210> 58
<211> 8
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG15 PAM
<220>
<223> description: MG15-1 PAM
<220>
<221> modified_base
<222> (2)..(4)
<223> a, c, t, g, unknown or other
<220>
<221> modified_base
<222> (6)..(6)
<223> a, c, t, g, unknown or other
<400> 58
cnnncnaa 8
<210> 59
<211> 6
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG18 PAM
<220>
<223> description: MG18-1 PAM
<220>
<221> modified_base
<222> (1)..(1)
<223> a, c, t, g, unknown or other
<400> 59
nrwart 6
<210> 60
<211> 8
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 chimeric PAM
<220>
<223> description: MG3-6_3-2 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<400> 60
nnrmyymw 8
<210> 61
<211> 8
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 chimeric PAM
<220>
<223> description: MG3-6_3-3 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<400> 61
nnhcccyr 8
<210> 62
<211> 8
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 chimeric PAM
<220>
<223> description: MG3-6_3-4 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<220>
<221> modified_base
<222> (7)..(8)
<223> a, c, t, g, unknown or other
<400> 62
nnaaaann 8
<210> 63
<211> 7
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 chimeric PAM
<220>
<223> description: MG3-6_3-7 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<220>
<221> modified_base
<222> (4)..(4)
<223> a, c, t, g, unknown or other
<400> 63
nnrnyay 7
<210> 64
<211> 7
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 chimeric PAM
<220>
<223> description: MG3-6_3-8 PAM
<220>
<221> modified_base
<222> (1)..(2)
<223> a, c, t, g, unknown or other
<400> 64
nnrggty 7
<210> 65
<211> 8
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 chimeric PAM
<220>
<223> description: MG 3-6_15-1-WPPAM
<220>
<221> modified_base
<222> (2)..(4)
<223> a, c, t, g, unknown or other
<400> 65
cnnncwaa 8
<210> 66
<211> 8
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG3 chimeric PAM
<220>
<223> description: MG3-6_15-1-P PAM
<220>
<221> modified_base
<222> (1)..(4)
<223> a, c, t, g, unknown or other
<400> 66
nnnncwaa 8
<210> 67
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 45 for targeting albumin intron 1
<400> 67
tgccagttcc cgatcgttac aggttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 68
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 78 for targeting albumin intron 1
<400> 68
aaataccagg cttccattac tagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 69
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-6 guide sequence 24 for targeting albumin intron 1
<400> 69
atttacaaac atgacagaaa cagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 70
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 34 for targeting albumin intron 1
<400> 70
cttaggtcag tgaagagaag aagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 71
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 44 for targeting albumin intron 1
<400> 71
atgccagttc ccgatcgtta cagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 72
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 87 for targeting albumin intron 1
<400> 72
cttctcggcg aaacacaccc ctgttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 73
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 81 for targeting albumin intron 1
<400> 73
ctagaaaaat acaagcagag atgttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 74
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 72 for targeting albumin intron 1
<400> 74
aataataatc tagaaatcag cagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 75
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 16 for targeting albumin intron 1
<400> 75
ctgcctgctc gaccatgcta tagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 76
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 59 for targeting albumin intron 1
<400> 76
aggcaggccc tatgagaccg tagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 77
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 30 for targeting albumin intron 1
<400> 77
ttttaaaaat aataatgttg gtgttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 78
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 20 for targeting albumin intron 1
<400> 78
tcgaccatgc tatactaaaa atgttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 79
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 84 for targeting albumin intron 1
<400> 79
atacaagcag agatgaaaaa acgttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 80
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 33 for targeting albumin intron 1
<400> 80
gcttaggtca gtgaagagaa gagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 81
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 64 for targeting albumin intron 1
<400> 81
aaagaaattt aaagctaagc ttgttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 82
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 53 for targeting albumin intron 1
<400> 82
ctaagacaat ggtaaataag aagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 83
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 73 for targeting albumin intron 1
<400> 83
taatctagaa atcagcacta aagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 84
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 74 for targeting albumin intron 1
<400> 84
aatctagaaa tcagcactaa aggttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 85
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 13 for targeting albumin intron 1
<400> 85
ctttaaattt cttttaatta aagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 86
<211> 110
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3 Hepa1-6 targeting guide (contained in sgRNA)
<220>
<223> description: MG3-6_3-4 guide sequence 19 for targeting albumin intron 1
<400> 86
ctcgaccatg ctatactaaa aagttgagaa tcgaaagatt cttaataagg catccttccg 60
atgctgactt ctcaccgtcc gttttccaat aggagcgggc ggtatgtttt 110
<210> 87
<211> 50
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: amplification of MG3-6 (718-840) against MG3-6 (1-840) _MG15-1 (818-1082)
<400> 87
gtcacccgcg aaagtcgtcg cgccggcggc atcgatgaac gcatcctgtt 50
<210> 88
<211> 54
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: amplification of MG3-6 (718-840) against MG3-6 (1-840) _MG15-1 (818-1082)
<400> 88
tagtctcttt gtgggcagga ccgtggatct tctctaagtg aacagatcca tttt 54
<210> 89
<211> 48
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: amplification of MG15-1 (818-1082) against MG3-6 (1-840) _MG15-1 (818-1082)
<400> 89
cgcccgcaaa atggatctgt tcacttagag aagatccacg gtcctgcc 48
<210> 90
<211> 50
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: amplification of MG15-1 (818-1082) against MG3-6 (1-840) _MG15-1 (818-1082)
<400> 90
gttatcagtg gtggtggtgg tggtgctcga gacggaacgt ttggcgcttc 50
<210> 91
<211> 48
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: amplification of MG3-6 (718-922) against MG3-6 (1-922) _MG15-1 (931-1082)
<400> 91
ggcgcgaaag acgtcgatgc gaaccatgtt gatttccgct acgccacg 48
<210> 92
<211> 48
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: MG15-1 (931-1082) was amplified against MG3-6 (1-922) _MG15-1 (931-1082)
<400> 92
tcctgacccc gcgtggcgta gcggaaatca acatggttcg catcgacg 48
<210> 93
<211> 38
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: LA065 primers for PCR in PAM enrichment assays
<220>
<221> modified_base
<222> (14)..(18)
<223> a, c, t, g, unknown or other
<400> 93
gctcttccga tctnnnnnat tgacggcggc atcggact 38
<210> 94
<211> 35
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: LA125 primers for PCR in PAM enrichment assays
<220>
<221> modified_base
<222> (14)..(18)
<223> a, c, t, g, unknown or other
<400> 94
gctcttccga tctnnnnngg tgttggcggg tgtcg 35
<210> 95
<211> 20
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: LA003 PAM enriched adaptors (heteroduplex of LA003/LA 011)
<400> 95
attgacggcg gcatcggact 20
<210> 96
<211> 21
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: LA011 PAM enrichment adapter (heteroduplex LA003/LA 011)
<400> 96
agtccgatgc cgccgtcaat t 21
<210> 97
<211> 20
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: 57F primer for Mulberry sequencing of edited Hepa1-6 cells
<400> 97
tctggcaaaa tgaagtgggt 20
<210> 98
<211> 20
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: 1072R primer for Mulberry sequencing of edited Hepa1-6 cells
<400> 98
tgccacattg ctcagcacag 20
<210> 99
<211> 20
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: 132F primer for Mulberry sequencing of edited Hepa1-6 cells
<400> 99
cgccgagaag cacgtaagag 20
<210> 100
<211> 21
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: 282F primer for Mulberry sequencing of edited Hepa1-6 cells
<400> 100
ttgcatctga gaacccttag g 21
<210> 101
<211> 23
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: 446R primers for Mulberry sequencing of edited Hepa1-6 cells
<400> 101
ccgtaataaa ttcaactgta tcc 23
<210> 102
<211> 20
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: 460F primer for Mulberry sequencing of edited Hepa1-6 cells
<400> 102
gcctgctcga ccatgctata 20
<210> 103
<211> 8755
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: plasmid(s)
<220>
<223> description: pMGX3-6 plasmid
<400> 103
ctcgagcacc accaccacca ccactgataa caaagcccga aaggaagctg agttggctgc 60
tgccaccgct gagcaataac tagcataacc ccttggggcc tctaaacggg tcttgagggg 120
ttttttgctg aaaggaggaa ctatatccgg attggcgaat gggacgcgcc ctgtagcggc 180
gcattaagcg cggcgggtgt ggtggttacg cgcagcgtga ccgctacact tgccagcgcc 240
ctagcgcccg ctcctttcgc tttcttccct tcctttctcg ccacgttcgc cggctttccc 300
cgtcaagctc taaatcgggg gctcccttta gggttccgat ttagtgcttt acggcacctc 360
gaccccaaaa aacttgatta gggtgatggt tcacgtagtg ggccatcgcc ctgatagacg 420
gtttttcgcc ctttgacgtt ggagtccacg ttctttaata gtggactctt gttccaaact 480
ggaacaacac tcaaccctat ctcggtctat tcttttgatt tataagggat tttgccgatt 540
tcggcctatt ggttaaaaaa tgagctgatt taacaaaaat ttaacgcgaa ttttaacaaa 600
atattaacgt ttacaatttc aggtggcact tttcggggaa atgtgcgcgg aacccctatt 660
tgtttatttt tctaaataca ttcaaatatg tatccgctca tgagacaata accctgataa 720
atgcttcaat aatattgaaa aaggaagagt atgagtattc aacatttccg tgtcgccctt 780
attccctttt ttgcggcatt ttgccttcct gtttttgctc acccagaaac gctggtgaaa 840
gtaaaagatg ctgaagatca gttgggtgca cgagtgggtt acatcgaact ggatctcaac 900
agcggtaaga tccttgagag ttttcgcccc gaagaacgtt ttccaatgat gagcactttt 960
aaagttctgc tatgtggcgc ggtattatcc cgtattgacg ccgggcaaga gcaactcggt 1020
cgccgcatac actattctca gaatgacttg gttgagtact caccagtcac agaaaagcat 1080
cttacggatg gcatgacagt aagagaatta tgcagtgctg ccataaccat gagtgataac 1140
actgcggcca acttacttct gacaacgatc ggaggaccga aggagctaac cgcttttttg 1200
cacaacatgg gggatcatgt aactcgcctt gatcgttggg aaccggagct gaatgaagcc 1260
ataccaaacg acgagcgtga caccacgatg cctgcagcaa tggcaacaac gttgcgcaaa 1320
ctattaactg gcgaactact tactctagct tcccggcaac aattaataga ctggatggag 1380
gcggataaag ttgcaggacc acttctgcgc tcggcccttc cggctggctg gtttattgct 1440
gataaatctg gagccggtga gcgtgggtct cgcggtatca ttgcagcact ggggccagat 1500
ggtaagccct cccgtatcgt agttatctac acgacgggga gtcaggcaac tatggatgaa 1560
cgaaatagac agatcgctga gataggtgcc tcactgatta agcattggta actgtcagac 1620
caagtttact catatatact ttagattgat ttaaaacttc atttttaatt taaaaggatc 1680
taggtgaaga tcctttttga taatctcatg accaaaatcc cttaacgtga gttttcgttc 1740
cactgagcgt cagaccccgt agaaaagatc aaaggatctt cttgagatcc tttttttctg 1800
cgcgtaatct gctgcttgca aacaaaaaaa ccaccgctac cagcggtggt ttgtttgccg 1860
gatcaagagc taccaactct ttttccgaag gtaactggct tcagcagagc gcagatacca 1920
aatactgtcc ttctagtgta gccgtagtta ggccaccact tcaagaactc tgtagcaccg 1980
cctacatacc tcgctctgct aatcctgtta ccagtggctg ctgccagtgg cgataagtcg 2040
tgtcttaccg ggttggactc aagacgatag ttaccggata aggcgcagcg gtcgggctga 2100
acggggggtt cgtgcacaca gcccagcttg gagcgaacga cctacaccga actgagatac 2160
ctacagcgtg agctatgaga aagcgccacg cttcccgaag ggagaaaggc ggacaggtat 2220
ccggtaagcg gcagggtcgg aacaggagag cgcacgaggg agcttccagg gggaaacgcc 2280
tggtatcttt atagtcctgt cgggtttcgc cacctctgac ttgagcgtcg atttttgtga 2340
tgctcgtcag gggggcggag cctatggaaa aacgccagca acgcggcctt tttacggttc 2400
ctggcctttt gctggccttt tgctcacatg ttctttcctg cgttatcccc tgattctgtg 2460
gataaccgta ttaccgcctt tgagtgagct gataccgctc gccgcagccg aacgaccgag 2520
cgcagcgagt cagtgagcga ggaagcggaa gagcgcctga tgcggtattt tctccttacg 2580
catctgtgcg gtatttcaca ccgcatatat ggtgcactct cagtacaatc tgctctgatg 2640
ccgcatagtt aagccagtat acactccgct atcgctacgt gactgggtca tggctgcgcc 2700
ccgacacccg ccaacacccg ctgacgcgcc ctgacgggct tgtctgctcc cggcatccgc 2760
ttacagacaa gctgtgaccg tctccgggag ctgcatgtgt cagaggtttt caccgtcatc 2820
accgaaacgc gcgaggcagc tgcggtaaag ctcatcagcg tggtcgtgaa gcgattcaca 2880
gatgtctgcc tgttcatccg cgtccagctc gttgagtttc tccagaagcg ttaatgtctg 2940
gcttctgata aagcgggcca tgttaagggc ggttttttcc tgtttggtca ctgatgcctc 3000
cgtgtaaggg ggatttctgt tcatgggggt aatgataccg atgaaacgag agaggatgct 3060
cacgatacgg gttactgatg atgaacatgc ccggttactg gaacgttgtg agggtaaaca 3120
actggcggta tggatgcggc gggaccagag aaaaatcact cagggtcaat gccagcgctt 3180
cgttaataca gatgtaggtg ttccacaggg tagccagcag catcctgcga tgcagatccg 3240
gaacataatg gtgcagggcg ctgacttccg cgtttccaga ctttacgaaa cacggaaacc 3300
gaagaccatt catgttgttg ctcaggtcgc agacgttttg cagcagcagt cgcttcacgt 3360
tcgctcgcgt atcggtgatt cattctgcta accagtaagg caaccccgcc agcctagccg 3420
ggtcctcaac gacaggagca cgatcatgcg cacccgtggg gccgccatgc cggcgataat 3480
ggcctgcttc tcgccgaaac gtttggtggc gggaccagtg acgaaggctt gagcgagggc 3540
gtgcaagatt ccgaataccg caagcgacag gccgatcatc gtcgcgctcc agcgaaagcg 3600
gtcctcgccg aaaatgaccc agagcgctgc cggcacctgt cctacgagtt gcatgataaa 3660
gaagacagtc ataagtgcgg cgacgatagt catgccccgc gcccaccgga aggagctgac 3720
tgggttgaag gctctcaagg gcatcggtcg agatcccggt gcctaatgag tgagctaact 3780
tacattaatt gcgttgcgct cactgcccgc tttccagtcg ggaaacctgt cgtgccagct 3840
gcattaatga atcggccaac gcgcggggag aggcggtttg cgtattgggc gccagggtgg 3900
tttttctttt caccagtgag acgggcaaca gctgattgcc cttcaccgcc tggccctgag 3960
agagttgcag caagcggtcc acgctggttt gccccagcag gcgaaaatcc tgtttgatgg 4020
tggttaacgg cgggatataa catgagctgt cttcggtatc gtcgtatccc actaccgaga 4080
tatccgcacc aacgcgcagc ccggactcgg taatggcgcg cattgcgccc agcgccatct 4140
gatcgttggc aaccagcatc gcagtgggaa cgatgccctc attcagcatt tgcatggttt 4200
gttgaaaacc ggacatggca ctccagtcgc cttcccgttc cgctatcggc tgaatttgat 4260
tgcgagtgag atatttatgc cagccagcca gacgcagacg cgccgagaca gaacttaatg 4320
ggcccgctaa cagcgcgatt tgctggtgac ccaatgcgac cagatgctcc acgcccagtc 4380
gcgtaccgtc ttcatgggag aaaataatac tgttgatggg tgtctggtca gagacatcaa 4440
gaaataacgc cggaacatta gtgcaggcag cttccacagc aatggcatcc tggtcatcca 4500
gcggatagtt aatgatcagc ccactgacgc gttgcgcgag aagattgtgc accgccgctt 4560
tacaggcttc gacgccgctt cgttctacca tcgacaccac cacgctggca cccagttgat 4620
cggcgcgaga tttaatcgcc gcgacaattt gcgacggcgc gtgcagggcc agactggagg 4680
tggcaacgcc aatcagcaac gactgtttgc ccgccagttg ttgtgccacg cggttgggaa 4740
tgtaattcag ctccgccatc gccgcttcca ctttttcccg cgttttcgca gaaacgtggc 4800
tggcctggtt caccacgcgg gaaacggtct gataagagac accggcatac tctgcgacat 4860
cgtataacgt tactggtttc acattcacca ccctgaattg actctcttcc gggcgctatc 4920
atgccatacc gcgaaaggtt ttgcgccatt cgatggtgtc cgggatctcg acgctctccc 4980
ttatgcgact cctgcattag gaagcagccc agtagtaggt tgaggccgtt gagcaccgcc 5040
gccgcaagga atggtgcatg caaggagatg gcgcccaaca gtcccccggc cacggggcct 5100
gccaccatac ccacgccgaa acaagcgctc atgagcccga agtggcgagc ccgatcttcc 5160
ccatcggtga tgtcggcgat ataggcgcca gcaaccgcac ctgtggcgcc ggtgatgccg 5220
gccacgatgc gtccggcgta gaggatcgag atctcgatcc cgcgaaatta atacgactca 5280
ctataggaat tgtgagcgga taacaattcc cctctagaaa taattttgtt taactttaag 5340
aaggagatat accatgtcaa ccgatatgaa gaattatcgc attggcgtgg acgtcgggga 5400
tcgcagcgta ggcttggcag cgattgagtt cgacgacgac gggctgccga ttcagaaact 5460
ggcattagtt acctttcgtc atgacggtgg cctcgaccca accaagaaca aaacgcctat 5520
gtcgcgcaaa gagacccgcg ggatcgcgcg ccgcaccatg cgtatgaatc gcgaacgcaa 5580
acgccgcctt cgcaatttgg acaacgtact ggagaactta ggctatagcg tacctgaggg 5640
acctgaaccg gaaacttacg aagcctggac gagccgcgca ctcttggcaa gcattaaatt 5700
agcatccgcc gacgaattaa acgaacacct ggttcgtgcc gttcgccaca tggcgcgcca 5760
tcgcggctgg gcaaacccct ggtggagcct ggatcaactc gaaaaggcat cacaagaacc 5820
cagcgaaacc ttcgaaatca tcttagcacg cgcacgcgaa ttattcggcg agaaagtacc 5880
agcgaacccc acccttggga tgctgggagc gctggcggca aacaacgaag tgctgctccg 5940
cccacgtgac gagaagaaac gcaaaacggg atacgtacgt ggaacgccgt tgatgttcgc 6000
acaagtgcgc caaggcgatc aattagccga attacgccgc atctgtgaag tacaaggcat 6060
cgaagatcaa tatgaagcgc tgcgtctggg tgtctttgat cacaaacatc cgtacgtccc 6120
aaaagagcgc gttggcaaag atccgttgaa cccgagcacc aaccgtacca tccgcgcaag 6180
ccttgaattc caagaatttc gtatcttaga cagtgttgcc aatctccgcg ttcgtatcgg 6240
cagtcgcgcc aaacgcgaac tcaccgaagc ggaatacgac gcagcggtag aatttctgat 6300
ggattacgcg gacaaagagc agcctagttg ggcggacgtg gcggaaaaga tcggggtgcc 6360
gggcaatcgt ctggtagccc ccgtcttaga agacgtacaa cagaaaacag ccccttacga 6420
tcgttcttct gcggcgttcg aaaaggctat ggggaagaaa actgaagccc gccaatggtg 6480
ggagtcgacg gacgacgatc aactgcgcag ccttctgatc gcgttcctgg tggacgccac 6540
taatgacacc gaggaagctg ccgcggaagc cggattaagc gaattgtaca aatcctggcc 6600
cgcggaagag cgcgaggctt taagcaatat cgacttcgaa aagggtcgcg tggcgtactc 6660
acaagaaaca ctgtccaagt taagtgaata tatgcacgaa tatcgcgtcg ggctgcatga 6720
agcacgtaaa gcagtatttg gggttgacga cacgtggcgc ccacctctgg acaaattaga 6780
agagcctacc ggacaacctg cagtagaccg tgtcctcacc atcttacgcc gcttcgtatt 6840
ggactgcgaa cgccaatggg gtcgccctcg tgccatcacc gtagagcaca ctcgcactgg 6900
tcttatgggc ccgactcaac gccaaaagat cttgaacgaa caaaagaaga atcgcgcaga 6960
caacgaacgc atccgtgacg aactgcgcga aagcggagtt gacaacccaa gtcgtgctga 7020
ggtgcgccgt cacttaatcg ttcaagaaca agaatgccaa tgtctgtatt gtggtaccat 7080
gatcacaact accaccagcg aactcgacca catcgtacca cgcgcaggcg gtggcagcag 7140
ccgccgcgaa aacttggccg ccgtatgtcg cgcctgcaac gcaaagaaga aacgcgagtt 7200
gttttacgcc tgggcgggac cggtcaaatc ccaagaaaca atcgaacgcg tgcgtcaact 7260
gaaagcattc aaagactcaa agaaagctaa gatgtttaag aaccaaatcc gccgcctgaa 7320
ccaaacagaa gcggacgaac ctatcgacga acgctctctc gcgagcacca gctacgctgc 7380
cgttgccgtc cgcgaacgct tagagcaaca tttcaacgaa ggactggccc tcgatgacaa 7440
atcacgtgtc gttttagacg tgtatgcggg cgcggtcacc cgcgaaagtc gtcgcgccgg 7500
cggcatcgat gaacgcatcc tgttgcgtgg cgaacgtgac aagaatcgct tcgacgttcg 7560
tcaccatgcc gtggacgcgg cagtaatgac gttgttgaat cgctctgtgg cattaacgct 7620
cgaacaacgt tcgcaacttc gtcgtacctt ctacgaacaa ggcttggaca agttagatcg 7680
caaccaatta aaacccgagg aagactggcg cgatttcaca gggttagccc cagccagcca 7740
agagaaattt ctggaatggc gcaaagcggc gaccatctta ggggatcttc tggccgaagc 7800
aattgaagac gatagcatcg ccgtggtatc tccgttacgc cttcgcccgc aaaatggatc 7860
tgttcactta gagaccatta gcgcggttaa gaaacagacg ctgggaagcg actggccggc 7920
agacgccgtc aaacgcatcg tcgaccctga aatctacctt gcaatgaaag acgcgctggg 7980
gaaattaaaa gaattgccgg aagactccgc tcgtagcctg gaattacctg acgggcgttt 8040
cgtggaagcg gacgacgaag tgctcttctt tcccgaaaat gcggccagca tcctgacccc 8100
gcgtggcgta gcggaaatcg gcggaagcat ccaccacgcg cgtctgtatg ggtggttaac 8160
caagaaaggt gaattaaaag ttggcatgct gcgcgtatac ggcgccgaat ttccatggct 8220
tatgcgcgaa tcgggcagcc gtaacgtgct ctctatgcct atccatcgcg gcagccaatc 8280
atttcgcgac atgcaagata ctacccgcaa ggcggtagag tccggggaag cagtagaatt 8340
cgcatggatc acgcaaaatg acgaattaga attcgaccct gacgattata tcgcgcacgg 8400
cggtaaagac gaactccgcc agttcttagg cttcatgcct gagtgtcgtt ggcgcgtcga 8460
cggcttcaag aagaattacc aaattcgcat ccgtccggcc atgttgtcgc gcgagcaact 8520
tcccagtgat atccaacgcc gcctggagag caagaccttg acgaagaatg agagccttct 8580
gttaaaggcc ttagacacgg gcttagtggt ggccatcggt ggcctgctgc cgttggagac 8640
cctgaaagtg atccgtcgta acaatctggg ttttccgcgc tggcgtggca acggtaactt 8700
gcccaccagt ttcgaggtgc gctccagcgc tctgcgcgcg cttggagtag agggg 8755
<210> 104
<211> 8599
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: plasmid(s)
<220>
<223> description: pMGX15-1 plasmid
<400> 104
ctcgagcacc accaccacca ccactgataa caaagcccga aaggaagctg agttggctgc 60
tgccaccgct gagcaataac tagcataacc ccttggggcc tctaaacggg tcttgagggg 120
ttttttgctg aaaggaggaa ctatatccgg attggcgaat gggacgcgcc ctgtagcggc 180
gcattaagcg cggcgggtgt ggtggttacg cgcagcgtga ccgctacact tgccagcgcc 240
ctagcgcccg ctcctttcgc tttcttccct tcctttctcg ccacgttcgc cggctttccc 300
cgtcaagctc taaatcgggg gctcccttta gggttccgat ttagtgcttt acggcacctc 360
gaccccaaaa aacttgatta gggtgatggt tcacgtagtg ggccatcgcc ctgatagacg 420
gtttttcgcc ctttgacgtt ggagtccacg ttctttaata gtggactctt gttccaaact 480
ggaacaacac tcaaccctat ctcggtctat tcttttgatt tataagggat tttgccgatt 540
tcggcctatt ggttaaaaaa tgagctgatt taacaaaaat ttaacgcgaa ttttaacaaa 600
atattaacgt ttacaatttc aggtggcact tttcggggaa atgtgcgcgg aacccctatt 660
tgtttatttt tctaaataca ttcaaatatg tatccgctca tgagacaata accctgataa 720
atgcttcaat aatattgaaa aaggaagagt atgagtattc aacatttccg tgtcgccctt 780
attccctttt ttgcggcatt ttgccttcct gtttttgctc acccagaaac gctggtgaaa 840
gtaaaagatg ctgaagatca gttgggtgca cgagtgggtt acatcgaact ggatctcaac 900
agcggtaaga tccttgagag ttttcgcccc gaagaacgtt ttccaatgat gagcactttt 960
aaagttctgc tatgtggcgc ggtattatcc cgtattgacg ccgggcaaga gcaactcggt 1020
cgccgcatac actattctca gaatgacttg gttgagtact caccagtcac agaaaagcat 1080
cttacggatg gcatgacagt aagagaatta tgcagtgctg ccataaccat gagtgataac 1140
actgcggcca acttacttct gacaacgatc ggaggaccga aggagctaac cgcttttttg 1200
cacaacatgg gggatcatgt aactcgcctt gatcgttggg aaccggagct gaatgaagcc 1260
ataccaaacg acgagcgtga caccacgatg cctgcagcaa tggcaacaac gttgcgcaaa 1320
ctattaactg gcgaactact tactctagct tcccggcaac aattaataga ctggatggag 1380
gcggataaag ttgcaggacc acttctgcgc tcggcccttc cggctggctg gtttattgct 1440
gataaatctg gagccggtga gcgtgggtct cgcggtatca ttgcagcact ggggccagat 1500
ggtaagccct cccgtatcgt agttatctac acgacgggga gtcaggcaac tatggatgaa 1560
cgaaatagac agatcgctga gataggtgcc tcactgatta agcattggta actgtcagac 1620
caagtttact catatatact ttagattgat ttaaaacttc atttttaatt taaaaggatc 1680
taggtgaaga tcctttttga taatctcatg accaaaatcc cttaacgtga gttttcgttc 1740
cactgagcgt cagaccccgt agaaaagatc aaaggatctt cttgagatcc tttttttctg 1800
cgcgtaatct gctgcttgca aacaaaaaaa ccaccgctac cagcggtggt ttgtttgccg 1860
gatcaagagc taccaactct ttttccgaag gtaactggct tcagcagagc gcagatacca 1920
aatactgtcc ttctagtgta gccgtagtta ggccaccact tcaagaactc tgtagcaccg 1980
cctacatacc tcgctctgct aatcctgtta ccagtggctg ctgccagtgg cgataagtcg 2040
tgtcttaccg ggttggactc aagacgatag ttaccggata aggcgcagcg gtcgggctga 2100
acggggggtt cgtgcacaca gcccagcttg gagcgaacga cctacaccga actgagatac 2160
ctacagcgtg agctatgaga aagcgccacg cttcccgaag ggagaaaggc ggacaggtat 2220
ccggtaagcg gcagggtcgg aacaggagag cgcacgaggg agcttccagg gggaaacgcc 2280
tggtatcttt atagtcctgt cgggtttcgc cacctctgac ttgagcgtcg atttttgtga 2340
tgctcgtcag gggggcggag cctatggaaa aacgccagca acgcggcctt tttacggttc 2400
ctggcctttt gctggccttt tgctcacatg ttctttcctg cgttatcccc tgattctgtg 2460
gataaccgta ttaccgcctt tgagtgagct gataccgctc gccgcagccg aacgaccgag 2520
cgcagcgagt cagtgagcga ggaagcggaa gagcgcctga tgcggtattt tctccttacg 2580
catctgtgcg gtatttcaca ccgcatatat ggtgcactct cagtacaatc tgctctgatg 2640
ccgcatagtt aagccagtat acactccgct atcgctacgt gactgggtca tggctgcgcc 2700
ccgacacccg ccaacacccg ctgacgcgcc ctgacgggct tgtctgctcc cggcatccgc 2760
ttacagacaa gctgtgaccg tctccgggag ctgcatgtgt cagaggtttt caccgtcatc 2820
accgaaacgc gcgaggcagc tgcggtaaag ctcatcagcg tggtcgtgaa gcgattcaca 2880
gatgtctgcc tgttcatccg cgtccagctc gttgagtttc tccagaagcg ttaatgtctg 2940
gcttctgata aagcgggcca tgttaagggc ggttttttcc tgtttggtca ctgatgcctc 3000
cgtgtaaggg ggatttctgt tcatgggggt aatgataccg atgaaacgag agaggatgct 3060
cacgatacgg gttactgatg atgaacatgc ccggttactg gaacgttgtg agggtaaaca 3120
actggcggta tggatgcggc gggaccagag aaaaatcact cagggtcaat gccagcgctt 3180
cgttaataca gatgtaggtg ttccacaggg tagccagcag catcctgcga tgcagatccg 3240
gaacataatg gtgcagggcg ctgacttccg cgtttccaga ctttacgaaa cacggaaacc 3300
gaagaccatt catgttgttg ctcaggtcgc agacgttttg cagcagcagt cgcttcacgt 3360
tcgctcgcgt atcggtgatt cattctgcta accagtaagg caaccccgcc agcctagccg 3420
ggtcctcaac gacaggagca cgatcatgcg cacccgtggg gccgccatgc cggcgataat 3480
ggcctgcttc tcgccgaaac gtttggtggc gggaccagtg acgaaggctt gagcgagggc 3540
gtgcaagatt ccgaataccg caagcgacag gccgatcatc gtcgcgctcc agcgaaagcg 3600
gtcctcgccg aaaatgaccc agagcgctgc cggcacctgt cctacgagtt gcatgataaa 3660
gaagacagtc ataagtgcgg cgacgatagt catgccccgc gcccaccgga aggagctgac 3720
tgggttgaag gctctcaagg gcatcggtcg agatcccggt gcctaatgag tgagctaact 3780
tacattaatt gcgttgcgct cactgcccgc tttccagtcg ggaaacctgt cgtgccagct 3840
gcattaatga atcggccaac gcgcggggag aggcggtttg cgtattgggc gccagggtgg 3900
tttttctttt caccagtgag acgggcaaca gctgattgcc cttcaccgcc tggccctgag 3960
agagttgcag caagcggtcc acgctggttt gccccagcag gcgaaaatcc tgtttgatgg 4020
tggttaacgg cgggatataa catgagctgt cttcggtatc gtcgtatccc actaccgaga 4080
tatccgcacc aacgcgcagc ccggactcgg taatggcgcg cattgcgccc agcgccatct 4140
gatcgttggc aaccagcatc gcagtgggaa cgatgccctc attcagcatt tgcatggttt 4200
gttgaaaacc ggacatggca ctccagtcgc cttcccgttc cgctatcggc tgaatttgat 4260
tgcgagtgag atatttatgc cagccagcca gacgcagacg cgccgagaca gaacttaatg 4320
ggcccgctaa cagcgcgatt tgctggtgac ccaatgcgac cagatgctcc acgcccagtc 4380
gcgtaccgtc ttcatgggag aaaataatac tgttgatggg tgtctggtca gagacatcaa 4440
gaaataacgc cggaacatta gtgcaggcag cttccacagc aatggcatcc tggtcatcca 4500
gcggatagtt aatgatcagc ccactgacgc gttgcgcgag aagattgtgc accgccgctt 4560
tacaggcttc gacgccgctt cgttctacca tcgacaccac cacgctggca cccagttgat 4620
cggcgcgaga tttaatcgcc gcgacaattt gcgacggcgc gtgcagggcc agactggagg 4680
tggcaacgcc aatcagcaac gactgtttgc ccgccagttg ttgtgccacg cggttgggaa 4740
tgtaattcag ctccgccatc gccgcttcca ctttttcccg cgttttcgca gaaacgtggc 4800
tggcctggtt caccacgcgg gaaacggtct gataagagac accggcatac tctgcgacat 4860
cgtataacgt tactggtttc acattcacca ccctgaattg actctcttcc gggcgctatc 4920
atgccatacc gcgaaaggtt ttgcgccatt cgatggtgtc cgggatctcg acgctctccc 4980
ttatgcgact cctgcattag gaagcagccc agtagtaggt tgaggccgtt gagcaccgcc 5040
gccgcaagga atggtgcatg caaggagatg gcgcccaaca gtcccccggc cacggggcct 5100
gccaccatac ccacgccgaa acaagcgctc atgagcccga agtggcgagc ccgatcttcc 5160
ccatcggtga tgtcggcgat ataggcgcca gcaaccgcac ctgtggcgcc ggtgatgccg 5220
gccacgatgc gtccggcgta gaggatcgag atctcgatcc cgcgaaatta atacgactca 5280
ctataggaat tgtgagcgga taacaattcc cctctagaaa taattttgtt taactttaag 5340
aaggagatat accatgaact atgtgctcgg cctggacgtc ggtattgctt cagtgggatg 5400
ggccgtgctt gagttgaatg aagaggacaa ccccattcgc attgagggtc ttggtgcgcg 5460
catcttcgat aaagcggaag tgcccaaaac cggggccagt ctcgccgcac ctcgtcgcat 5520
gagtcgtggc atccgtcgcg tgattcgtcg tcgccgcttt cgcttacaac gcgtccgctc 5580
atacctgaag aagcacaaca ttctccctgc cgagaaggtt gatcacttat acgacgttcc 5640
atctgccatc gacatctacg agctccgtaa gcgcgcactg actgagaagg tcacagccga 5700
ggagtgggcg cgcctgttaa tcttcttcgc gaaacaccgt ggtttcaagt ccaaccgcaa 5760
gaaggcttcg ggagacgccg acgagggcga gatgctcaag gcgatcgcag caaacgccga 5820
aatcctgaag aactatcgta cagtgggaga gatgctgtgc gacaacgaga agtttcgtaa 5880
acgtaagcgt aatcgcgatg gcgcatacaa ctttactgtc tctcgtgcga tgctgatgga 5940
agaaattcac acgctgttcg agattcaacg caacttgggc cagaagttcg cggacgagaa 6000
gctggaagag gagtacgtga tcctcttcgc cgctcaacgt aaattcgatg aaggacctgg 6060
agaaaattcg ccgtacgcgg ggaaccagat tgagaagatg atcggttcct gcacgttaga 6120
gggcaagaaa gagaagcgtg ctccaaaggc ctcatacgca tttatggcat ttaatttatg 6180
gcaaaagatc aatcacttga aagtcaatcg tcgtggtagt gaacgcttcc tgaccgaaga 6240
ggagcgccgc cgcattgcgg acctggcgtg gaagaaggag aagcttacct acggttcact 6300
gcgtaaggtg ctctcgttgg accccgagga tcgcttcgtt ggcctgcgtt acgacctcaa 6360
gaaaggcaag gccgagaact tagaagaacc cgtttctgag gcagaaaagc gttccttttc 6420
atgggtcaag gattatcact ccattcgtaa ggcccttgac aaggtggaga agaatcgcat 6480
tttgaagctc tctcacgagc aactggacac aattgccacc gcgtttagtg tttacaagaa 6540
cgaagagacc attgaaaagt acctggaaga gggcggcatt ggtaaggccg acggtgaggc 6600
gctgcttgag cgtttgagcg gatttagcaa gtttggtcac ctgagcctga aggcgtgtta 6660
taagctgctg ccgttcctgg agaagggcga ggtgtactca cgcgcttgtg agttggcggg 6720
gtacgacttt agtaaatcgt ccttggagaa cattgacgac attccgaacc cggtcgtaaa 6780
gcgctcgatt tctcagaccc ttaaggtgat taacgcgatc attctgcgct acggcaaccc 6840
agttgaggtt cacattgagt tagcacgtga gctcgcccgt tcttttcgcg accgcaagaa 6900
gatggagaag ggtatgcaag agaaccaagc gaagaacgag aaaattcgtc agcgcctgat 6960
tagtgagttc ggggtgctgc gcccaaaagg catggacatt gttaagttca aattatgtga 7020
ggaacaaaac ggggagtgtg cctactcgca aaagcacttt gacatggaaa agttacttaa 7080
ggacccgagt tacgccgagg ttgaccacat tatcccgtac tcacgctcat tcgacgacag 7140
ttataacaac aaggtgctgg ttctgacgaa ggagaatcgt gagaaacgta atcgtatccc 7200
gatggagtac ctcgccgacg cgcctgagcg caagaaccgt ttcattcact gggtcaaatc 7260
cacaatccgc aatagtcgca aacgtgagaa tcttctgcgt accgattaca cggcgactac 7320
cgagaatgag tggaagcgcc gtaacctgca ggacactcaa tacatttcga aatatttata 7380
taactacctg cgccatcacc tggtccttgc gaaaggttac acagagcgta agcgtcgcat 7440
cattccggtt aacggtgctg taaccgcata ctttcgcaaa cgcctgggta ttaacaagat 7500
tcgtgagaat ggcgacctgc atcacgcggt ggacgccgtt attattgcgt gtgccacaca 7560
gggaatcgtc aacaaagttt cccgctatag taaatcgcgc gaactctggg actacgaggt 7620
cgacatggag acgggtgagg tgctgcagaa gaagaacaag aataccaagg atgtctttcc 7680
ggagccgtgg cttaactttc gttacgagtt ggagcagaag gttcgtgtgc gccccttgga 7740
cattcccgag acggcagaca tcacggagat ggaagagccg ttcgttagtc atatgcctaa 7800
ccgtaagatc cacggtcctg cccacaaaga gactatccgc tctggccgcc ttaaagagga 7860
aggttacaca atcagcaaga ccgctctcat cgacttaaag cttactgagg acaaggaaga 7920
gattaagggc tattataaca aggagtcgga ccgccttttg tacgaggctt taaagaagca 7980
gctgcagcgc tacggtggca aagctaagga agcgttcaag gagccgtttc acaagcctaa 8040
agcagatggt accccgggcc caatcgttaa caaggtaaag atcatggaga agagcactat 8100
gttaatcccg gtgaacggcg ggaagggtct cgcgtcaaac ggcaacatgg ttcgcatcga 8160
cgtctttcgc gccgaggaga aaggtaagaa gaaatattac ttcatcccgg tttatgttgc 8220
tgacactgtt aaggaagagc ttccgaaccg tgcggtcttg gcccacaaac catacgaagc 8280
ctggaaaatt atgaaggaag aaaacttcat cttctccctc tacccgaacg accttatctt 8340
cgtcgacgcc ggtaaggaaa tcccgttcaa agccgcactg aagggtagca cccttgaccc 8400
ggaaaagaaa gcatcgcgtt tcctgatgta ctacaaaggg gccgacatcg ctaccggtag 8460
tattagtggc gtgaaccacg acgaaaccta caaagcacgc ggcgtaggta ttcagtcact 8520
gcgcgagatt aagaaatgtt gcattgacgt gctgggcaac atcagcttcg cttccaaaga 8580
gaagcgccaa acgttccgt 8599
<210> 105
<211> 7579
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: plasmid(s)
<220>
<223> description: pAL3 plasmid
<400> 105
ctcgagcacc accaccacca ccactgataa caaagcccga aaggaagctg agttggctgc 60
tgccaccgct gagcaataac tagcataacc ccttggggcc tctaaacggg tcttgagggg 120
ttttttgctg aaaggaggaa ctatatccgg attggcgaat gggacgcgcc ctgtagcggc 180
gcattaagcg cggcgggtgt ggtggttacg cgcagcgtga ccgctacact tgccagcgcc 240
ctagcgcccg ctcctttcgc tttcttccct tcctttctcg ccacgttcgc cggctttccc 300
cgtcaagctc taaatcgggg gctcccttta gggttccgat ttagtgcttt acggcacctc 360
gaccccaaaa aacttgatta gggtgatggt tcacgtagtg ggccatcgcc ctgatagacg 420
gtttttcgcc ctttgacgtt ggagtccacg ttctttaata gtggactctt gttccaaact 480
ggaacaacac tcaaccctat ctcggtctat tcttttgatt tataagggat tttgccgatt 540
tcggcctatt ggttaaaaaa tgagctgatt taacaaaaat ttaacgcgaa ttttaacaaa 600
atattaacgt ttacaatttc aggtggcact tttcggggaa atgtgcgcgg aacccctatt 660
tgtttatttt tctaaataca ttcaaatatg tatccgctca tgagacaata accctgataa 720
atgcttcaat aatattgaaa aaggaagagt atgagtattc aacatttccg tgtcgccctt 780
attccctttt ttgcggcatt ttgccttcct gtttttgctc acccagaaac gctggtgaaa 840
gtaaaagatg ctgaagatca gttgggtgca cgagtgggtt acatcgaact ggatctcaac 900
agcggtaaga tccttgagag ttttcgcccc gaagaacgtt ttccaatgat gagcactttt 960
aaagttctgc tatgtggcgc ggtattatcc cgtattgacg ccgggcaaga gcaactcggt 1020
cgccgcatac actattctca gaatgacttg gttgagtact caccagtcac agaaaagcat 1080
cttacggatg gcatgacagt aagagaatta tgcagtgctg ccataaccat gagtgataac 1140
actgcggcca acttacttct gacaacgatc ggaggaccga aggagctaac cgcttttttg 1200
cacaacatgg gggatcatgt aactcgcctt gatcgttggg aaccggagct gaatgaagcc 1260
ataccaaacg acgagcgtga caccacgatg cctgcagcaa tggcaacaac gttgcgcaaa 1320
ctattaactg gcgaactact tactctagct tcccggcaac aattaataga ctggatggag 1380
gcggataaag ttgcaggacc acttctgcgc tcggcccttc cggctggctg gtttattgct 1440
gataaatctg gagccggtga gcgtgggtct cgcggtatca ttgcagcact ggggccagat 1500
ggtaagccct cccgtatcgt agttatctac acgacgggga gtcaggcaac tatggatgaa 1560
cgaaatagac agatcgctga gataggtgcc tcactgatta agcattggta actgtcagac 1620
caagtttact catatatact ttagattgat ttaaaacttc atttttaatt taaaaggatc 1680
taggtgaaga tcctttttga taatctcatg accaaaatcc cttaacgtga gttttcgttc 1740
cactgagcgt cagaccccgt agaaaagatc aaaggatctt cttgagatcc tttttttctg 1800
cgcgtaatct gctgcttgca aacaaaaaaa ccaccgctac cagcggtggt ttgtttgccg 1860
gatcaagagc taccaactct ttttccgaag gtaactggct tcagcagagc gcagatacca 1920
aatactgtcc ttctagtgta gccgtagtta ggccaccact tcaagaactc tgtagcaccg 1980
cctacatacc tcgctctgct aatcctgtta ccagtggctg ctgccagtgg cgataagtcg 2040
tgtcttaccg ggttggactc aagacgatag ttaccggata aggcgcagcg gtcgggctga 2100
acggggggtt cgtgcacaca gcccagcttg gagcgaacga cctacaccga actgagatac 2160
ctacagcgtg agctatgaga aagcgccacg cttcccgaag ggagaaaggc ggacaggtat 2220
ccggtaagcg gcagggtcgg aacaggagag cgcacgaggg agcttccagg gggaaacgcc 2280
tggtatcttt atagtcctgt cgggtttcgc cacctctgac ttgagcgtcg atttttgtga 2340
tgctcgtcag gggggcggag cctatggaaa aacgccagca acgcggcctt tttacggttc 2400
ctggcctttt gctggccttt tgctcacatg ttctttcctg cgttatcccc tgattctgtg 2460
gataaccgta ttaccgcctt tgagtgagct gataccgctc gccgcagccg aacgaccgag 2520
cgcagcgagt cagtgagcga ggaagcggaa gagcgcctga tgcggtattt tctccttacg 2580
catctgtgcg gtatttcaca ccgcatatat ggtgcactct cagtacaatc tgctctgatg 2640
ccgcatagtt aagccagtat acactccgct atcgctacgt gactgggtca tggctgcgcc 2700
ccgacacccg ccaacacccg ctgacgcgcc ctgacgggct tgtctgctcc cggcatccgc 2760
ttacagacaa gctgtgaccg tctccgggag ctgcatgtgt cagaggtttt caccgtcatc 2820
accgaaacgc gcgaggcagc tgcggtaaag ctcatcagcg tggtcgtgaa gcgattcaca 2880
gatgtctgcc tgttcatccg cgtccagctc gttgagtttc tccagaagcg ttaatgtctg 2940
gcttctgata aagcgggcca tgttaagggc ggttttttcc tgtttggtca ctgatgcctc 3000
cgtgtaaggg ggatttctgt tcatgggggt aatgataccg atgaaacgag agaggatgct 3060
cacgatacgg gttactgatg atgaacatgc ccggttactg gaacgttgtg agggtaaaca 3120
actggcggta tggatgcggc gggaccagag aaaaatcact cagggtcaat gccagcgctt 3180
cgttaataca gatgtaggtg ttccacaggg tagccagcag catcctgcga tgcagatccg 3240
gaacataatg gtgcagggcg ctgacttccg cgtttccaga ctttacgaaa cacggaaacc 3300
gaagaccatt catgttgttg ctcaggtcgc agacgttttg cagcagcagt cgcttcacgt 3360
tcgctcgcgt atcggtgatt cattctgcta accagtaagg caaccccgcc agcctagccg 3420
ggtcctcaac gacaggagca cgatcatgcg cacccgtggg gccgccatgc cggcgataat 3480
ggcctgcttc tcgccgaaac gtttggtggc gggaccagtg acgaaggctt gagcgagggc 3540
gtgcaagatt ccgaataccg caagcgacag gccgatcatc gtcgcgctcc agcgaaagcg 3600
gtcctcgccg aaaatgaccc agagcgctgc cggcacctgt cctacgagtt gcatgataaa 3660
gaagacagtc ataagtgcgg cgacgatagt catgccccgc gcccaccgga aggagctgac 3720
tgggttgaag gctctcaagg gcatcggtcg agatcccggt gcctaatgag tgagctaact 3780
tacattaatt gcgttgcgct cactgcccgc tttccagtcg ggaaacctgt cgtgccagct 3840
gcattaatga atcggccaac gcgcggggag aggcggtttg cgtattgggc gccagggtgg 3900
tttttctttt caccagtgag acgggcaaca gctgattgcc cttcaccgcc tggccctgag 3960
agagttgcag caagcggtcc acgctggttt gccccagcag gcgaaaatcc tgtttgatgg 4020
tggttaacgg cgggatataa catgagctgt cttcggtatc gtcgtatccc actaccgaga 4080
tatccgcacc aacgcgcagc ccggactcgg taatggcgcg cattgcgccc agcgccatct 4140
gatcgttggc aaccagcatc gcagtgggaa cgatgccctc attcagcatt tgcatggttt 4200
gttgaaaacc ggacatggca ctccagtcgc cttcccgttc cgctatcggc tgaatttgat 4260
tgcgagtgag atatttatgc cagccagcca gacgcagacg cgccgagaca gaacttaatg 4320
ggcccgctaa cagcgcgatt tgctggtgac ccaatgcgac cagatgctcc acgcccagtc 4380
gcgtaccgtc ttcatgggag aaaataatac tgttgatggg tgtctggtca gagacatcaa 4440
gaaataacgc cggaacatta gtgcaggcag cttccacagc aatggcatcc tggtcatcca 4500
gcggatagtt aatgatcagc ccactgacgc gttgcgcgag aagattgtgc accgccgctt 4560
tacaggcttc gacgccgctt cgttctacca tcgacaccac cacgctggca cccagttgat 4620
cggcgcgaga tttaatcgcc gcgacaattt gcgacggcgc gtgcagggcc agactggagg 4680
tggcaacgcc aatcagcaac gactgtttgc ccgccagttg ttgtgccacg cggttgggaa 4740
tgtaattcag ctccgccatc gccgcttcca ctttttcccg cgttttcgca gaaacgtggc 4800
tggcctggtt caccacgcgg gaaacggtct gataagagac accggcatac tctgcgacat 4860
cgtataacgt tactggtttc acattcacca ccctgaattg actctcttcc gggcgctatc 4920
atgccatacc gcgaaaggtt ttgcgccatt cgatggtgtc cgggatctcg acgctctccc 4980
ttatgcgact cctgcattag gaagcagccc agtagtaggt tgaggccgtt gagcaccgcc 5040
gccgcaagga atggtgcatg caaggagatg gcgcccaaca gtcccccggc cacggggcct 5100
gccaccatac ccacgccgaa acaagcgctc atgagcccga agtggcgagc ccgatcttcc 5160
ccatcggtga tgtcggcgat ataggcgcca gcaaccgcac ctgtggcgcc ggtgatgccg 5220
gccacgatgc gtccggcgta gaggatcgag atctcgatcc cgcgaaatta atacgactca 5280
ctataggaat tgtgagcgga taacaattcc cctctagaaa taattttgtt taactttaag 5340
aaggagatat accatgtcaa ccgatatgaa gaattatcgc attggcgtgg acgtcgggga 5400
tcgcagcgta ggcttggcag cgattgagtt cgacgacgac gggctgccga ttcagaaact 5460
ggcattagtt acctttcgtc atgacggtgg cctcgaccca accaagaaca aaacgcctat 5520
gtcgcgcaaa gagacccgcg ggatcgcgcg ccgcaccatg cgtatgaatc gcgaacgcaa 5580
acgccgcctt cgcaatttgg acaacgtact ggagaactta ggctatagcg tacctgaggg 5640
acctgaaccg gaaacttacg aagcctggac gagccgcgca ctcttggcaa gcattaaatt 5700
agcatccgcc gacgaattaa acgaacacct ggttcgtgcc gttcgccaca tggcgcgcca 5760
tcgcggctgg gcaaacccct ggtggagcct ggatcaactc gaaaaggcat cacaagaacc 5820
cagcgaaacc ttcgaaatca tcttagcacg cgcacgcgaa ttattcggcg agaaagtacc 5880
agcgaacccc acccttggga tgctgggagc gctggcggca aacaacgaag tgctgctccg 5940
cccacgtgac gagaagaaac gcaaaacggg atacgtacgt ggaacgccgt tgatgttcgc 6000
acaagtgcgc caaggcgatc aattagccga attacgccgc atctgtgaag tacaaggcat 6060
cgaagatcaa tatgaagcgc tgcgtctggg tgtctttgat cacaaacatc cgtacgtccc 6120
aaaagagcgc gttggcaaag atccgttgaa cccgagcacc aaccgtacca tccgcgcaag 6180
ccttgaattc caagaatttc gtatcttaga cagtgttgcc aatctccgcg ttcgtatcgg 6240
cagtcgcgcc aaacgcgaac tcaccgaagc ggaatacgac gcagcggtag aatttctgat 6300
ggattacgcg gacaaagagc agcctagttg ggcggacgtg gcggaaaaga tcggggtgcc 6360
gggcaatcgt ctggtagccc ccgtcttaga agacgtacaa cagaaaacag ccccttacga 6420
tcgttcttct gcggcgttcg aaaaggctat ggggaagaaa actgaagccc gccaatggtg 6480
ggagtcgacg gacgacgatc aactgcgcag ccttctgatc gcgttcctgg tggacgccac 6540
taatgacacc gaggaagctg ccgcggaagc cggattaagc gaattgtaca aatcctggcc 6600
cgcggaagag cgcgaggctt taagcaatat cgacttcgaa aagggtcgcg tggcgtactc 6660
acaagaaaca ctgtccaagt taagtgaata tatgcacgaa tatcgcgtcg ggctgcatga 6720
agcacgtaaa gcagtatttg gggttgacga cacgtggcgc ccacctctgg acaaattaga 6780
agagcctacc ggacaacctg cagtagaccg tgtcctcacc atcttacgcc gcttcgtatt 6840
ggactgcgaa cgccaatggg gtcgccctcg tgccatcacc gtagagcaca ctcgcactgg 6900
tcttatgggc ccgactcaac gccaaaagat cttgaacgaa caaaagaaga atcgcgcaga 6960
caacgaacgc atccgtgacg aactgcgcga aagcggagtt gacaacccaa gtcgtgctga 7020
ggtgcgccgt cacttaatcg ttcaagaaca agaatgccaa tgtctgtatt gtggtaccat 7080
gatcacaact accaccagcg aactcgacca catcgtacca cgcgcaggcg gtggcagcag 7140
ccgccgcgaa aacttggccg ccgtatgtcg cgcctgcaac gcaaagaaga aacgcgagtt 7200
gttttacgcc tgggcgggac cggtcaaatc ccaagaaaca atcgaacgcg tgcgtcaact 7260
gaaagcattc aaagactcaa agaaagctaa gatgtttaag aaccaaatcc gccgcctgaa 7320
ccaaacagaa gcggacgaac ctatcgacga acgctctctc gcgagcacca gctacgctgc 7380
cgttgccgtc cgcgaacgct tagagcaaca tttcaacgaa ggactggccc tcgatgacaa 7440
atcacgtgtc gttttagacg tgtatgcggg cgcggtcacc cgcgaaagtc gtcgcgccgg 7500
cggcatcgat gaacgcatcc tgttgcgtgg cgaacgtgac aagaatcgct tcgacgttcg 7560
tcaccatgcc gtggacgcg 7579
<210> 106
<211> 2356
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: plasmid(s)
<220>
<223> description: PAM library U67/U40 plasmid
<220>
<221> modified_base
<222> (2277)..(2284)
<223> a, c, t, g, unknown or other
<400> 106
aatttaagcc agccccgaca cccgccaaca cccgctgacg cgccctgacg ggcttgtctg 60
ctcccggcat ccgcttacag acaagctgtg accgtctccg ggagctgcat gtgtcagagg 120
ttttcaccgt catcaccgaa acgcgcgaga cgaaagggcc tcgtgatacg cctattttta 180
taggttaatg tcatgataat aatggtttct tagacgtcag gtggcacttt tcggggaaat 240
gtgcgcggaa cccctatttg tttatttttc taaatacatt caaatatgta tccgctcatg 300
agacaataac cctgataaat gcttcaataa tattgaaaaa ggaagagtat gagccatatt 360
caacgggaaa cgtcttgctc taggccgcga ttaaattcca acatggatgc tgatttatat 420
gggtataaat gggctcgcga taatgtcggg caatcaggtg cgacaatcta tcgattgtat 480
gggaagcccg atgcgccaga gttgtttctg aaacatggca aaggtagcgt tgccaatgat 540
gttacagatg agatggtcag actaaactgg ctgacggaat ttatgcctct tccgaccatc 600
aagcatttta tccgtactcc tgatgatgca tggttactca ccactgcgat ccccgggaaa 660
acagcattcc aggtattaga agaatatcct gattcaggtg aaaatattgt tgatgcgctg 720
gcagtgttcc tgcgccggtt gcattcgatt cctgtttgta attgtccttt taacagcgat 780
cgcgtatttc gtctcgctca ggcgcaatca cgaatgaata acggtttggt tgatgcgagt 840
gattttgatg acgagcgtaa tggctggcct gttgaacaag tctggaaaga aatgcataaa 900
cttttgccat tctcaccgga ttcagtcgtc actcatggtg atttctcact tgataacctt 960
atttttgacg aggggaaatt aataggttgt attgatgttg gacgagtcgg aatcgcagac 1020
cgataccagg atcttgccat cctatggaac tgcctcggtg agttttctcc ttcattacag 1080
aaacggcttt ttcaaaaata tggtattgat aatcctgata tgaataaatt gcagtttcat 1140
ttgatgctcg atgagttttt ctaactgtca gaccaagttt actcatatat actttagatt 1200
gatttaaaac ttcattttta atttaaaagg atctaggtga agatcctttt tgataatctc 1260
atgaccaaaa tcccttaacg tgagttttcg ttccactgag cgtcagaccc cgtagaaaag 1320
atcaaaggat cttcttgaga tccttttttt ctgcgcgtaa tctgctgctt gcaaacaaaa 1380
aaaccaccgc taccagcggt ggtttgtttg ccggatcaag agctaccaac tctttttccg 1440
aaggtaactg gcttcagcag agcgcagata ccaaatactg ttcttctagt gtagccgtag 1500
ttaggccacc acttcaagaa ctctgtagca ccgcctacat acctcgctct gctaatcctg 1560
ttaccagtgg ctgctgccag tggcgataag tcgtgtctta ccgggttgga ctcaagacga 1620
tagttaccgg ataaggcgca gcggtcgggc tgaacggggg gttcgtgcac acagcccagc 1680
ttggagcgaa cgacctacac cgaactgaga tacctacagc gtgagctatg agaaagcgcc 1740
acgcttcccg aagggagaaa ggcggacagg tatccggtaa gcggcagggt cggaacagga 1800
gagcgcacga gggagcttcc agggggaaac gcctggtatc tttatagtcc tgtcgggttt 1860
cgccacctct gacttgagcg tcgatttttg tgatgctcgt caggggggcg gagcctatgg 1920
aaaaacgcca gcaacgcggc ctttttacgg ttcctggcct tttgctggcc ttttgctcac 1980
atgttctttc ctgcgttatc ccctgattct gtggataacc gtattaccgc ctttgagtga 2040
gctgataccg ctcgccgcag ccgaacgacc gagcgcagcg agtcagtgag cgaggaagcg 2100
gaagagcgcc caatacgcaa accgcctctc cccgcgcgtt ggccgattca ttaatgcagc 2160
tggcacgaca ggtttcccga ctggaaattc attaaaaatt gaattgacat taacctataa 2220
aaataggcgt cgaggccctt tcgtcttccg tgagccacca cgtcgcaagc ctcgacnnnn 2280
nnnntggaga tatcttgaac cttgcatccc cggaagagag tcaatcccgg aagagagtca 2340
attcagggtg gtgaat 2356
<210> 107
<211> 2801
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: plasmid(s)
<220>
<223> description: pMG010 plasmid
<400> 107
gcggaacccc tatttgttta tttttctaaa tacattcaaa tatgtatccg ctcatgagac 60
aataaccctg ataaatgctt caataatatt gaaaaaggaa gagtatgagt attcaacatt 120
tccgtgtcgc ccttattccc ttttttgcgg cattttgcct tcctgttttt gctcacccag 180
aaacgctggt gaaagtaaaa gatgctgaag atcagttggg tgcacgagtg ggttacatcg 240
aactggatct caacagcggt aagatccttg agagttttcg ccccgaagaa cgttttccaa 300
tgatgagcac ttttaaagtt ctgctatgtg gcgcggtatt atcccgtatt gacgccgggc 360
aagagcaact cggtcgccgc atacactatt ctcagaatga cttggttgag tactcaccag 420
tcacagaaaa gcatcttacg gatggcatga cagtaagaga attatgcagt gctgccataa 480
ccatgagtga taacactgcg gccaacttac ttctgacaac gatcggagga ccgaaggagc 540
taaccgcttt tttgcacaac atgggggatc atgtaactcg ccttgatcgt tgggaaccgg 600
agctgaatga agccatacca aacgacgagc gtgacaccac gatgcctgta gcaatggcaa 660
caacgttgcg caaactatta actggcgaac tacttactct agcttcccgg caacaattaa 720
tagactggat ggaggcggat aaagttgcag gaccacttct gcgctcggcc cttccggctg 780
gctggtttat tgctgataaa tctggagccg gtgagcgtgg gtctcgcggt atcattgcag 840
cactggggcc agatggtaag ccctcccgta tcgtagttat ctacacgacg gggagtcagg 900
caactatgga tgaacgaaat agacagatcg ctgagatagg tgcctcactg attaagcatt 960
ggtaactgtc agaccaagtt tactcatata tactttagat tgatttaaaa cttcattttt 1020
aatttaaaag gatctaggtg aagatccttt ttgataatct catgaccaaa atcccttaac 1080
gtgagttttc gttccactga gcgtcagacc ccgtagaaaa gatcaaagga tcttcttgag 1140
atcctttttt tctgcgcgta atctgctgct tgcaaacaaa aaaaccaccg ctaccagcgg 1200
tggtttgttt gccggatcaa gagctaccaa ctctttttcc gaaggtaact ggcttcagca 1260
gagcgcagat accaaatact gttcttctag tgtagccgta gttaggccac cacttcaaga 1320
actctgtagc accgcctaca tacctcgctc tgctaatcct gttaccagtg gctgctgcca 1380
gtggcgataa gtcgtgtctt accgggttgg actcaagacg atagttaccg gataaggcgc 1440
agcggtcggg ctgaacgggg ggttcgtgca cacagcccag cttggagcga acgacctaca 1500
ccgaactgag atacctacag cgtgagctat gagaaagcgc cacgcttccc gaagggagaa 1560
aggcggacag gtatccggta agcggcaggg tcggaacagg agagcgcacg agggagcttc 1620
cagggggaaa cgcctggtat ctttatagtc ctgtcgggtt tcgccacctc tgacttgagc 1680
gtcgattttt gtgatgctcg tcaggggggc ggagcctatg gaaaaacgcc agcaacgcgg 1740
cctttttacg gttcctggcc ttttgctggc cttttgctca catgttcttt cctgcgttat 1800
cccctgattc tgtggataac cgtattaccg cctttgagtg agctgatacc gctcgccgca 1860
gccgaacgac cgagcgcagc gagtcagtga gcgaggaagc ggaagagcgc ccaatacgca 1920
aaccgcctct ccccgcgcgt tggccgattc attaatgcag ctggcacgac aggtttcccg 1980
actggaaagc gggcagtgag cgcaacgcaa ttaatgtgag ttagctcact cattaggcac 2040
cccaggcttt acactttatg cttccggctc gtatgttgtg tggaattgtg agcggataac 2100
aatttcacac aggaaacagc tatgaccatg attacgccaa gcttgcatgc ctgcaggtcg 2160
actctagagg atcccttgaa gactaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2220
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2280
aaaaaaaaaa aagaagagca agtcccgaat tcactggccg tcgttttaca acgtcgtgac 2340
tgggaaaacc ctggcgttac ccaacttaat cgccttgcag cacatccccc tttcgccagc 2400
tggcgtaata gcgaagaggc ccgcaccgat cgcccttccc aacagttgcg cagcctgaat 2460
ggcgaatggc gcctgatgcg gtattttctc cttacgcatc tgtgcggtat ttcacaccgc 2520
atatggtgca ctctcagtac aatctgctct gatgccgcat agttaagcca gccccgacac 2580
ccgccaacac ccgctgacgc gccctgacgg gcttgtctgc tcccggcatc cgcttacaga 2640
caagctgtga ccgtctccgg gagctgcatg tgtcagaggt tttcaccgtc atcaccgaaa 2700
cgcgcgagac gaaagggcct cgtgatacgc ctatttttat aggttaatgt catgataata 2760
atggtttctt agacgtcagg tggcactttt cggggaaatg t 2801
<210> 108
<211> 3773
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 containing 5'UTR, NLS, CDS, NLS, 3' UTR, polyA tail
<220>
<223> description: MG3-6/3-4 mRNA
<400> 108
aaaagccagc tccagcaggc gctgctcact cctccccatc ctctccctct gtccctctgt 60
ccctctgacc ctgcactgtc ccagcaccat ggcccccaag aagaagcgga aagttggcgg 120
cggaggcagc tccacggata tgaagaacta caggatcggg gtcgatgtgg gagaccggtc 180
cgtgggactc gccgccatcg aatttgatga tgatggcttg cccatccaaa agctagctct 240
cgtgactttc cgacacgatg gcgggctaga tcctacaaag aataagactc ccatgagccg 300
gaaggaaaca agaggtattg caagacggac gatgaggatg aaccgggaga gaaagcggcg 360
tctgcgaaac ctggataatg tccttgaaaa tctgggatac tcagtcccag aaggcccaga 420
gccagagacc tatgaggcat ggacctcacg ggccctgctg gcttccatca agctggctag 480
cgctgatgag ctgaatgagc atttggtgcg ggctgtgcga catatggcta ggcacagagg 540
atgggcgaat ccttggtggt ccctcgacca gctggagaaa gccagccagg agccttctga 600
gacatttgag attatacttg ctagggctcg agagctgttt ggtgaaaagg ttcctgccaa 660
tcctactctg ggtatgctcg gcgccttggc agccaataat gaggttctcc tgcgaccgag 720
agatgaaaag aagaggaaga caggctatgt gcgagggact cctctgatgt ttgcgcaggt 780
ccgtcagggt gaccagcttg ctgagctgcg acggatttgc gaggtgcagg gaattgagga 840
ccagtacgag gccctcagac ttggggtgtt cgaccataag cacccctatg tgcccaagga 900
aagagtgggg aaggaccccc tcaatccatc tacaaataga acgatacggg ctagtttgga 960
gtttcaggag ttcaggatac tggattctgt agctaacctt agggtacgga ttgggtctcg 1020
tgcgaagcgg gagctgactg aggcagagta tgatgccgct gttgagttcc taatggacta 1080
tgctgataag gaacaaccat cctgggctga tgttgctgag aaaataggcg tccccgggaa 1140
ccggttggtc gctcctgtgc tcgaggatgt ccagcaaaag accgctccat atgaccgctc 1200
cagcgctgct ttcgagaaag caatgggcaa gaagaccgag gctcggcagt ggtgggaatc 1260
tacagatgat gaccagctta gatctctgct tattgcattt cttgtagatg caacaaacga 1320
tacagaagag gcggcggctg aggcaggcct ttcagagcta tataagtctt ggcctgcaga 1380
ggaacgagaa gcactaagta acattgattt cgagaaaggt agggttgcct attctcagga 1440
gaccttgtca aaactaagcg agtacatgca tgagtaccgt gtgggactcc acgaggctag 1500
gaaggccgtg ttcggcgtag atgatacctg gcgaccgccg ttggataagc tggaagaacc 1560
cactggccag ccggctgtgg atcgcgtgct aactatactg aggcggtttg tcctggattg 1620
tgagaggcag tggggtcgtc cccgagcaat aacagtggaa cataccagga ccggcttgat 1680
gggacctacc cagaggcaga aaattctgaa tgagcagaag aagaaccgag ctgataatga 1740
gcggattcgc gatgagctac gggagtctgg cgtggataat ccttctcggg ccgaagtacg 1800
gcggcatttg attgtacagg agcaggagtg tcagtgcttg tactgcggca ctatgattac 1860
gaccacaaca tcagagctgg atcatattgt gcccagggct ggggggggat cttcccgaag 1920
ggagaatctg gcagctgttt gcagagcttg taatgccaag aagaagagag aactcttcta 1980
tgcatgggct ggcccagtta agtctcagga gaccattgag agagttagac agcttaaggc 2040
ctttaaggat tctaagaagg ccaaaatgtt caagaatcag attaggcgat tgaatcagac 2100
cgaggccgat gagcccattg atgagcggtc cctggcatca acaagttatg ccgctgtggc 2160
tgtgcgagag agactagaac agcactttaa tgagggcctc gcgctggacg ataagagccg 2220
ggtggtgctt gatgtctacg ctggggccgt gacacgggag tccaggcggg caggtggtat 2280
tgacgagagg attctgctgc ggggagagcg agataagaac cgatttgatg tccgacatca 2340
cgcggtcgat gccgcagtca tgactttgct taataggagc gtcgcactca cccttgagca 2400
gagaagccag ctacgcaggg ctttctatga gctggagcta gataaacttg accgagatca 2460
gcttaagccc ggcgaagatt ggcggaactt tacgggcctc tacgaggcaa gccagaataa 2520
gttctcagag tggaagaagg ccgctacagt actcggggat ctactcgctg aagccattga 2580
ggatgatgcc attgctgtcg tgagccctct gcgattgagg ccgcagaatg gcagcgtcca 2640
cgatgacaca attaatgcgg ttaagaagct gactttgggg tccgcatggc cagccgatgc 2700
cgtgaagagg atagttgatc cagagatata cttggcaatg aaggacgtcc taggaaaact 2760
aaaggagcta cccgaggata gcgcaaggtc cttggagctc tctgatggca ggtacataga 2820
ggctgatgat gaggttctgt tcttccctaa gaaggcagct tccatactga ctccaagagg 2880
cgctgcagag atagggaatt ctatacatca tgcccgcctt tattcttggc tgaccaagaa 2940
gggagaattg aagttcggaa tgctccgagt gtatggggcg gagttcccgt ggctcatgcg 3000
ggaatccggt tccagagatg ttctccatat gcctattcat ccaggaagtc agtcattccg 3060
cggcatgcag gatggggttc gaaaggcagt agagagcggc gaagctgtgg agtttggatg 3120
gattacccag gatgatgagt tggagtttga tcctgaagac tacattgctc acggcggcga 3180
tgatgagctt aataggctac ttagagtaat gcctgagaga aggtggcggg tcgatggctt 3240
ctataatgcc ggaacgctta ggattagacc agcacttctc tctgcggagc agctgccttc 3300
agagctccag aagaaggtgg cagataagac tctgagtgac gttgagctta ttctgctgcg 3360
cgccgtacag cgtgggttgt ttgttgctat aagtagcttt ctccctctgg agagcctgaa 3420
ggttataagg cggaataact tgggcttccc aagatggcgg ggaaacggaa atttgccaac 3480
atctttcgag gtcaggagca gtgctctcag ggctctcggg gttgaaggat ctggcggaaa 3540
aagacctgcc gccacaaaga aagccggaca ggccaagaaa aagaagtgac cacaccccca 3600
ttcccccact ccagatagaa cttcagttat atctcacgtg tctggagttg gatcccttga 3660
agactaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3720
aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa 3773
<210> 109
<211> 1279
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG29 chimeric effector
<220>
<223> description: MG29-1_29-5 chimera
<400> 109
Met Phe Asn Asn Phe Ile Lys Lys Tyr Ser Leu Gln Lys Thr Leu Arg
1 5 10 15
Phe Glu Leu Lys Pro Val Gly Glu Thr Ala Asp Tyr Ile Glu Asp Phe
20 25 30
Lys Ser Glu Tyr Leu Lys Asp Thr Val Leu Lys Asp Glu Gln Arg Ala
35 40 45
Lys Asp Tyr Gln Glu Ile Lys Thr Leu Ile Asp Asp Tyr His Arg Glu
50 55 60
Tyr Ile Glu Glu Cys Leu Arg Glu Pro Val Asp Lys Lys Thr Gly Glu
65 70 75 80
Ile Leu Asp Phe Thr Gln Asp Leu Glu Asp Ala Phe Ser Tyr Tyr Gln
85 90 95
Lys Leu Lys Glu Asn Pro Thr Glu Asn Arg Val Gly Trp Glu Lys Glu
100 105 110
Gln Glu Ser Leu Arg Lys Lys Leu Val Thr Ser Phe Val Gly Asn Asp
115 120 125
Gly Leu Phe Lys Lys Glu Phe Ile Thr Arg Asp Leu Pro Glu Trp Leu
130 135 140
Gln Lys Lys Gly Leu Trp Gly Glu Tyr Lys Asp Thr Val Glu Asn Phe
145 150 155 160
Lys Lys Phe Thr Thr Tyr Phe Ser Gly Phe His Glu Asn Arg Lys Asn
165 170 175
Met Tyr Thr Ala Glu Ala Gln Ser Thr Ala Ile Ala Asn Arg Leu Met
180 185 190
Asn Asp Asn Leu Pro Lys Phe Phe Asn Asn Tyr Leu Ala Tyr Gln Thr
195 200 205
Ile Lys Glu Lys His Pro Asp Leu Val Phe Arg Leu Asp Asp Ala Leu
210 215 220
Leu Gln Ala Ala Gly Val Glu His Leu Asp Glu Ala Phe Gln Pro Arg
225 230 235 240
Tyr Phe Ser Arg Leu Phe Ala Gln Ser Gly Ile Thr Ala Phe Asn Glu
245 250 255
Leu Ile Gly Gly Arg Thr Thr Glu Asn Gly Glu Lys Ile Gln Gly Leu
260 265 270
Asn Glu Gln Ile Asn Leu Tyr Arg Gln Gln Asn Pro Glu Lys Ala Lys
275 280 285
Gly Phe Pro Arg Phe Met Pro Leu Phe Lys Gln Ile Leu Ser Asp Arg
290 295 300
Glu Thr His Ser Phe Leu Pro Asp Ala Phe Glu Asn Asp Lys Glu Leu
305 310 315 320
Leu Gln Ala Leu Arg Asp Tyr Val Asp Ala Ala Thr Ser Glu Glu Gly
325 330 335
Met Ile Ser Gln Leu Asn Lys Ala Met Asn Gln Phe Val Thr Ala Asp
340 345 350
Leu Lys Arg Val Tyr Ile Lys Ser Ala Ala Leu Thr Ser Leu Ser Gln
355 360 365
Glu Leu Phe His Phe Phe Gly Val Ile Ser Asp Ala Ile Ala Trp Tyr
370 375 380
Ala Glu Lys Arg Leu Ser Pro Lys Lys Ala Gln Glu Ser Phe Leu Lys
385 390 395 400
Gln Glu Val Tyr Ala Ile Glu Glu Leu Asn Gln Ala Val Val Gly Tyr
405 410 415
Ile Asp Gln Leu Glu Asp Gln Ser Glu Leu Gln Gln Leu Leu Val Asp
420 425 430
Leu Pro Asp Pro Gln Lys Pro Val Ser Ser Phe Ile Leu Thr His Trp
435 440 445
Gln Lys Ser Gln Glu Pro Leu Gln Ala Val Ile Ala Lys Val Glu Pro
450 455 460
Leu Phe Glu Leu Glu Glu Leu Ser Lys Asn Lys Arg Ala Pro Lys His
465 470 475 480
Asp Lys Asp Gln Gly Gly Glu Gly Phe Gln Gln Val Asp Ala Ile Lys
485 490 495
Asn Met Leu Asp Ala Phe Met Glu Val Ser His Ala Ile Lys Pro Leu
500 505 510
Tyr Leu Val Lys Gly Arg Lys Ala Ile Asp Met Pro Asp Val Asp Thr
515 520 525
Gly Phe Tyr Ala Asp Phe Ala Glu Ala Tyr Ser Ala Tyr Glu Gln Val
530 535 540
Thr Val Ser Leu Tyr Asn Lys Thr Arg Asn His Leu Ser Lys Lys Pro
545 550 555 560
Tyr Lys Arg Asp Lys Ile Lys Leu Asn Phe Glu Ala Pro Thr Leu Leu
565 570 575
Asn Gly Trp Asp Leu Asn Lys Glu Arg Ala Asn Arg Ser Val Leu Leu
580 585 590
Leu Lys Asn Gly Asn Tyr Tyr Leu Ala Ile Met His Pro Asn His Thr
595 600 605
Asp Ile Phe Lys Lys Tyr Met Glu Met Asp Asn Ser Asp Asn Tyr Glu
610 615 620
Lys Ile Asn Tyr Lys Leu Ile Ser Asp Ala Asn Arg Met Leu Pro Arg
625 630 635 640
Val Phe Phe Ser Lys Lys Gly Ile Lys Thr Tyr Asp Pro Pro Lys Ser
645 650 655
Ile Leu Glu Leu Tyr Lys Lys Gly Glu His Ile Lys Gly Pro Ser Phe
660 665 670
Lys Leu Glu Ser Leu His Arg Leu Ile Asp Tyr Phe Lys Ser Val Val
675 680 685
Ser Lys Tyr Lys Ala Asp Pro Gly Asp Gln Tyr Gly Trp Glu Val Phe
690 695 700
Asp Phe Lys Phe Ser Pro Thr Ser Gln Tyr Glu Asp Ile Gly Gln Phe
705 710 715 720
Tyr Lys Glu Leu Glu Lys Gln Ala Tyr Arg Val Trp Phe Thr Pro Ile
725 730 735
Ser Ser Thr Tyr Ile Glu Glu Ala Ala Lys His Gly Lys Leu Phe Leu
740 745 750
Phe Gln Ile Tyr Asn Lys Asp Phe Ser Pro Tyr Ala Lys Gly Arg Pro
755 760 765
Asn Leu His Thr Leu Tyr Trp Lys Ser Leu Phe Glu Lys Glu Asn Leu
770 775 780
Gln Asp Val Ile Thr Lys Leu Asn Gly Glu Ala Glu Ile Phe Phe Arg
785 790 795 800
His His Ser Ile Lys Lys Ala Asp Thr Val Ile His Lys Ala Gly Glu
805 810 815
Thr Ile Lys Asn Lys Asn Glu Asn Asn Pro Lys Gln Glu Ser Thr Phe
820 825 830
Lys His Asp Ile Ile Lys Asp Arg Arg Tyr Thr Val Asp Lys Ile Leu
835 840 845
Phe His Val Pro Ile Thr Ile Asn Phe Lys Asn Asp Lys Val Val Arg
850 855 860
Phe Asn Asp Lys Ile Asn Gly Leu Leu Ala Ala Gln Asp Asp Val His
865 870 875 880
Val Ile Gly Ile Asp Arg Gly Glu Arg His Leu Leu Tyr Tyr Thr Val
885 890 895
Val Asn Gly Lys Gly Glu Val Val Glu Gln Gly Ser Leu Asn Gln Val
900 905 910
Ala Thr Asp Gln Gly Tyr Val Val Asp Tyr Gln Gln Lys Leu His Ala
915 920 925
Lys Glu Lys Glu Arg Asp Gln Ala Arg Lys Asn Trp Ser Thr Ile Glu
930 935 940
Asn Ile Lys Glu Leu Lys Ala Gly Tyr Leu Ser Gln Val Val His Lys
945 950 955 960
Leu Ala Gln Leu Ile Val Lys His Asn Ala Ile Val Cys Leu Glu Asp
965 970 975
Leu Asn Phe Gly Phe Lys Arg Gly Arg Phe Lys Val Glu Lys Gln Val
980 985 990
Tyr Gln Lys Phe Glu Lys Ala Leu Ile Asp Lys Leu Asn Tyr Leu Val
995 1000 1005
Phe Lys Glu Arg Gly Ala Thr Gln Ala Gly Gly Tyr Leu Asn Ala
1010 1015 1020
Tyr Gln Leu Ala Ala Pro Phe Glu Ser Phe Glu Lys Leu Gly Lys
1025 1030 1035
Gln Thr Gly Ile Leu Tyr Tyr Val Arg Ser Asp Tyr Thr Ser Lys
1040 1045 1050
Ile Asp Pro Ala Thr Gly Phe Val Asp Phe Leu Lys Pro Lys Tyr
1055 1060 1065
Glu Ser Met Ala Lys Ser Lys Val Phe Phe Glu Ser Phe Glu Arg
1070 1075 1080
Ile Gln Trp Asn Gln Ala Lys Gly Tyr Phe Glu Phe Glu Phe Asp
1085 1090 1095
Tyr Lys Lys Met Cys Pro Ser Arg Lys Phe Gly Asp Tyr Arg Thr
1100 1105 1110
Arg Trp Val Val Cys Thr Phe Gly Asp Thr Arg Tyr Gln Asn Arg
1115 1120 1125
Arg Asn Lys Ser Ser Gly Gln Trp Glu Thr Glu Thr Ile Asp Val
1130 1135 1140
Thr Ala Gln Leu Lys Ala Leu Phe Ala Ala Tyr Gly Ile Thr Tyr
1145 1150 1155
Asn Gln Glu Asp Asn Ile Lys Asp Ala Ile Ala Ala Val Lys Tyr
1160 1165 1170
Thr Lys Phe Tyr Lys Gln Leu Tyr Trp Leu Leu Arg Leu Thr Leu
1175 1180 1185
Ser Leu Arg His Ser Val Thr Gly Thr Asp Glu Asp Phe Ile Leu
1190 1195 1200
Ser Pro Val Ala Asp Glu Asn Gly Val Phe Phe Asp Ser Arg Lys
1205 1210 1215
Ala Thr Asp Lys Gln Pro Lys Asp Ala Asp Ala Asn Gly Ala Tyr
1220 1225 1230
His Ile Ala Leu Lys Gly Leu Trp Asn Leu Gln Gln Ile Arg Gln
1235 1240 1245
His Asp Trp Asn Val Glu Lys Pro Lys Lys Leu Asn Leu Ala Met
1250 1255 1260
Lys Asn Glu Glu Trp Phe Gly Phe Ala Gln Lys Lys Lys Phe Arg
1265 1270 1275
Ala
<210> 110
<211> 1291
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG29 chimeric effector
<220>
<223> description: MG29-1_57-1 chimera
<400> 110
Met Phe Asn Asn Phe Ile Lys Lys Tyr Ser Leu Gln Lys Thr Leu Arg
1 5 10 15
Phe Glu Leu Lys Pro Val Gly Glu Thr Ala Asp Tyr Ile Glu Asp Phe
20 25 30
Lys Ser Glu Tyr Leu Lys Asp Thr Val Leu Lys Asp Glu Gln Arg Ala
35 40 45
Lys Asp Tyr Gln Glu Ile Lys Thr Leu Ile Asp Asp Tyr His Arg Glu
50 55 60
Tyr Ile Glu Glu Cys Leu Arg Glu Pro Val Asp Lys Lys Thr Gly Glu
65 70 75 80
Ile Leu Asp Phe Thr Gln Asp Leu Glu Asp Ala Phe Ser Tyr Tyr Gln
85 90 95
Lys Leu Lys Glu Asn Pro Thr Glu Asn Arg Val Gly Trp Glu Lys Glu
100 105 110
Gln Glu Ser Leu Arg Lys Lys Leu Val Thr Ser Phe Val Gly Asn Asp
115 120 125
Gly Leu Phe Lys Lys Glu Phe Ile Thr Arg Asp Leu Pro Glu Trp Leu
130 135 140
Gln Lys Lys Gly Leu Trp Gly Glu Tyr Lys Asp Thr Val Glu Asn Phe
145 150 155 160
Lys Lys Phe Thr Thr Tyr Phe Ser Gly Phe His Glu Asn Arg Lys Asn
165 170 175
Met Tyr Thr Ala Glu Ala Gln Ser Thr Ala Ile Ala Asn Arg Leu Met
180 185 190
Asn Asp Asn Leu Pro Lys Phe Phe Asn Asn Tyr Leu Ala Tyr Gln Thr
195 200 205
Ile Lys Glu Lys His Pro Asp Leu Val Phe Arg Leu Asp Asp Ala Leu
210 215 220
Leu Gln Ala Ala Gly Val Glu His Leu Asp Glu Ala Phe Gln Pro Arg
225 230 235 240
Tyr Phe Ser Arg Leu Phe Ala Gln Ser Gly Ile Thr Ala Phe Asn Glu
245 250 255
Leu Ile Gly Gly Arg Thr Thr Glu Asn Gly Glu Lys Ile Gln Gly Leu
260 265 270
Asn Glu Gln Ile Asn Leu Tyr Arg Gln Gln Asn Pro Glu Lys Ala Lys
275 280 285
Gly Phe Pro Arg Phe Met Pro Leu Phe Lys Gln Ile Leu Ser Asp Arg
290 295 300
Glu Thr His Ser Phe Leu Pro Asp Ala Phe Glu Asn Asp Lys Glu Leu
305 310 315 320
Leu Gln Ala Leu Arg Asp Tyr Val Asp Ala Ala Thr Ser Glu Glu Gly
325 330 335
Met Ile Ser Gln Leu Asn Lys Ala Met Asn Gln Phe Val Thr Ala Asp
340 345 350
Leu Lys Arg Val Tyr Ile Lys Ser Ala Ala Leu Thr Ser Leu Ser Gln
355 360 365
Glu Leu Phe His Phe Phe Gly Val Ile Ser Asp Ala Ile Ala Trp Tyr
370 375 380
Ala Glu Lys Arg Leu Ser Pro Lys Lys Ala Gln Glu Ser Phe Leu Lys
385 390 395 400
Gln Glu Val Tyr Ala Ile Glu Glu Leu Asn Gln Ala Val Val Gly Tyr
405 410 415
Ile Asp Gln Leu Glu Asp Gln Ser Glu Leu Gln Gln Leu Leu Val Asp
420 425 430
Leu Pro Asp Pro Gln Lys Pro Val Ser Ser Phe Ile Leu Thr His Trp
435 440 445
Gln Lys Ser Gln Glu Pro Leu Gln Ala Val Ile Ala Lys Val Glu Pro
450 455 460
Leu Phe Glu Leu Glu Glu Leu Ser Lys Asn Lys Arg Ala Pro Lys His
465 470 475 480
Asp Lys Asp Gln Gly Gly Glu Gly Phe Gln Gln Val Asp Ala Ile Lys
485 490 495
Asn Met Leu Asp Ala Phe Met Glu Val Ser His Ala Ile Lys Pro Leu
500 505 510
Tyr Leu Val Lys Gly Arg Lys Ala Ile Asp Met Pro Asp Val Asp Thr
515 520 525
Gly Phe Tyr Ala Asp Phe Ala Glu Ala Tyr Ser Ala Tyr Glu Gln Val
530 535 540
Thr Val Ser Leu Tyr Asn Lys Thr Arg Asn His Leu Ser Lys Lys Pro
545 550 555 560
Gln Asp Asp Val Lys Glu Asn Lys Leu Lys Leu Asn Phe Gly Asn Ser
565 570 575
Ser Leu Leu Gly Gly Trp Ser Asp Gly Gln Glu Lys Thr Lys Ala Ala
580 585 590
Thr Leu Leu Arg Cys Glu Asn Asp Leu Tyr Leu Cys Ile Leu Lys Lys
595 600 605
Arg Asp Val Phe Asp Thr Ser Lys Asp Asn Pro Ile Tyr Ser Ser Pro
610 615 620
Ser Asn Ala Ser Arg Leu Ile Ile Arg Asn Leu Lys Phe Gln Thr Leu
625 630 635 640
Ala Gly Lys Gly Phe Leu Ser Glu Tyr Gly Ile Ser Tyr Gly Glu Met
645 650 655
Ser Lys Asp Asp Pro Lys Lys Ala Ile Gln Cys Leu Gln Glu Ile Ile
660 665 670
Lys Glu Arg Tyr Val Lys Lys Tyr Pro Leu Leu Glu Lys Phe Val Thr
675 680 685
Ile Lys Tyr Ala Asp Lys Ser Glu Phe Asp Ala Glu Ile Asn Glu Thr
690 695 700
Leu Lys Glu Cys Tyr Val Cys Glu Phe Val Pro Ile Asn Trp Asn Leu
705 710 715 720
Ile Val Glu Lys Gln Asn Asn Asp Glu Leu Phe Leu Phe Lys Ile Leu
725 730 735
Cys Lys Asp Tyr Lys Pro Asn Ser Ile Gly Lys Arg Asp Leu Gln Thr
740 745 750
Ile Tyr Trp Glu Asp Val Leu Ser Asp Ala Ser Asn His Gln Leu Cys
755 760 765
Ala Gly Ala Glu Ile Phe Met Arg Lys Pro Ile Ala Asn Glu Ser Pro
770 775 780
Leu Thr His Arg Ile Gly Ser Lys Leu Val Asn Lys Arg Asp Lys Asp
785 790 795 800
Gly Asn Thr Ile Pro Asp Lys Phe Tyr Arg Glu Ile Tyr Leu Tyr Ala
805 810 815
Asn Gly Lys Thr Lys Val Ile Ser Lys Glu Ala Lys Lys Tyr Ile Asp
820 825 830
Glu Glu Lys Ala Thr Ile Lys Asp Val Asn His Glu Ile Ile Lys Asp
835 840 845
Lys Arg Phe Tyr Gly Asp Ser Gln Glu Pro Gln Tyr Met Phe His Cys
850 855 860
Pro Ile Lys Leu Asn Tyr Lys Thr Lys Val Val Arg Phe Asn Asp Lys
865 870 875 880
Ile Asn Gly Leu Leu Ala Ala Gln Asp Asp Val His Val Ile Gly Ile
885 890 895
Asp Arg Gly Glu Arg His Leu Leu Tyr Tyr Thr Val Val Asn Gly Lys
900 905 910
Gly Glu Val Val Glu Gln Gly Ser Leu Asn Gln Val Ala Thr Asp Gln
915 920 925
Gly Tyr Val Val Asp Tyr Gln Gln Lys Leu His Ala Lys Glu Lys Glu
930 935 940
Arg Asp Gln Ala Arg Lys Asn Trp Ser Thr Ile Glu Asn Ile Lys Glu
945 950 955 960
Leu Lys Ala Gly Tyr Leu Ser Gln Val Val His Lys Leu Ala Gln Leu
965 970 975
Ile Val Lys His Asn Ala Ile Val Cys Leu Glu Asp Leu Asn Phe Gly
980 985 990
Phe Lys Arg Gly Arg Phe Lys Val Glu Lys Gln Val Tyr Gln Lys Phe
995 1000 1005
Glu Lys Ala Leu Ile Asp Lys Leu Asn Tyr Leu Val Phe Lys Glu
1010 1015 1020
Arg Gly Ala Thr Gln Ala Gly Gly Tyr Leu Asn Ala Tyr Gln Leu
1025 1030 1035
Ala Ala Pro Phe Glu Ser Phe Glu Lys Leu Gly Lys Gln Thr Gly
1040 1045 1050
Ile Leu Tyr Tyr Val Arg Ser Asp Tyr Thr Ser Lys Ile Asp Pro
1055 1060 1065
Ala Thr Gly Phe Val Asp Phe Leu Lys Pro Lys Tyr Glu Ser Met
1070 1075 1080
Ala Lys Ser Lys Val Phe Phe Glu Ser Phe Glu Arg Ile Gln Trp
1085 1090 1095
Asn Gln Ala Lys Gly Tyr Phe Glu Phe Glu Phe Asp Tyr Lys Lys
1100 1105 1110
Met Cys Pro Ser Arg Lys Phe Gly Asp Tyr Arg Thr Arg Trp Val
1115 1120 1125
Val Cys Thr Phe Gly Asp Thr Arg Tyr Gln Asn Arg Arg Asn Lys
1130 1135 1140
Ser Ser Gly Gln Trp Glu Thr Glu Thr Ile Asp Val Thr Ala Gln
1145 1150 1155
Leu Lys Ala Leu Phe Ala Ala Tyr Gly Ile Thr Tyr Asn Gln Glu
1160 1165 1170
Asp Asn Ile Lys Asp Ala Ile Ala Ala Val Lys Tyr Thr Lys Phe
1175 1180 1185
Tyr Lys Gln Leu Tyr Trp Leu Leu Arg Leu Thr Leu Ser Leu Arg
1190 1195 1200
His Ser Val Thr Gly Thr Asp Glu Asp Phe Ile Leu Ser Pro Val
1205 1210 1215
Ala Asp Glu Asn Gly Val Phe Phe Asp Ser Arg Lys Ala Thr Asp
1220 1225 1230
Lys Gln Pro Lys Asp Ala Asp Ala Asn Gly Ala Tyr His Ile Ala
1235 1240 1245
Leu Lys Gly Leu Trp Asn Leu Gln Gln Ile Arg Gln His Asp Trp
1250 1255 1260
Asn Val Glu Lys Pro Lys Lys Leu Asn Leu Ala Met Lys Asn Glu
1265 1270 1275
Glu Trp Phe Gly Phe Ala Gln Lys Lys Lys Phe Arg Ala
1280 1285 1290
<210> 111
<211> 39
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG29 sgRNA
<220>
Description of: MG29-1 sgRNA
<220>
<221> modified_base
<222> (20)..(39)
<223> a, c, t, g, unknown or other
<400> 111
aatttctact gttgtagatn nnnnnnnnnn nnnnnnnnn 39
<210> 112
<211> 39
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG29 sgRNA
<220>
Description of: MG29-5 sgRNA
<220>
<221> modified_base
<222> (20)..(39)
<223> a, c, t, g, unknown or other
<400> 112
aatttctaca gttgtagatn nnnnnnnnnn nnnnnnnnn 39
<210> 113
<211> 39
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG57 sgRNA
<220>
<223> description: MG57-1 sgRNA
<220>
<221> modified_base
<222> (20)..(39)
<223> a, c, t, g, unknown or other
<400> 113
aatttctact atcgtagatn nnnnnnnnnn nnnnnnnnn 39
<210> 114
<211> 4
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG29 PAM
<220>
<223> description: MG29-1 PAM
<220>
<221> modified_base
<222> (4)..(4)
<223> a, c, t, g, unknown or other
<400> 114
tttn 4
<210> 115
<211> 4
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG29 PAM
<220>
<223> description: MG29-5 PAM
<220>
<221> modified_base
<222> (4)..(4)
<223> a, c, t, g, unknown or other
<400> 115
yyyn 4
<210> 116
<211> 2
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG57 PAM
<220>
<223> description: MG57-1 PAM
<220>
<221> modified_base
<222> (2)..(2)
<223> a, c, t, g, unknown or other
<400> 116
yn 2
<210> 117
<211> 4
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: MG29 chimeric PAM
<220>
<223> description: MG29-1_29-5 PAM
<220>
<221> modified_base
<222> (4)..(4)
<223> a, c, t, g, unknown or other
<400> 117
tyyn 4
<210> 118
<211> 35
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: primer(s)
<220>
<223> description: LA179 primer for PCR in PAM enrichment assay
<220>
<221> modified_base
<222> (14)..(18)
<223> a, c, t, g, unknown or other
<400> 118
gctcttccga tctnnnnngc agctggcacg acagg 35
<210> 119
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC A1
<400> 119
gccguguacc agcugagaga cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 120
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC B1
<400> 120
auucaccgau uuugauucuc aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 121
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC C1
<400> 121
gauucugaug uguauaucac agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 122
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC D1
<400> 122
aacagugcug uggccuggag caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 123
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC E1
<400> 123
ggcuggggaa gaaggugucu ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 124
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC F1
<400> 124
guuuugucug ugauauacac auguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 125
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC G1
<400> 125
uuacuuugug acacauuugu uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 126
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC H1
<400> 126
uugugacaca uuuguuugag aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 127
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC A2
<400> 127
ugugacacau uuguuugaga auguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 128
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC B2
<400> 128
auuuguuuga gaaucaaaau cgguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 129
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC C2
<400> 129
uuccugugau gucaagcugg ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 130
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC D2
<400> 130
uccugugaug ucaagcuggu cgguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 131
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC E2
<400> 131
gucaagcugg ucgagaaaag cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 132
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC F2
<400> 132
agcuugacau cacaggaacu uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 133
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC G2
<400> 133
gacaucacag gaacuuucua aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 134
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC H2
<400> 134
uuacagauac gaaccuaaac uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 135
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC A3
<400> 135
aaaaccuguc agugauuggg uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 136
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC B3
<400> 136
gauuggguuc cgaauccucc ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 137
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC C3
<400> 137
ggaacccaau cacugacagg uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 138
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRAC-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRAC D3
<400> 138
uugaaaguuu agguucguau cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 139
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC A1
<400> 139
gccgtgtacc agctgagaga ct 22
<210> 140
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC B1
<400> 140
attcaccgat tttgattctc aa 22
<210> 141
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC C1
<400> 141
gattctgatg tgtatatcac ag 22
<210> 142
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC D1
<400> 142
aacagtgctg tggcctggag ca 22
<210> 143
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC E1
<400> 143
ggctggggaa gaaggtgtct tc 22
<210> 144
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC F1
<400> 144
gttttgtctg tgatatacac at 22
<210> 145
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC G1
<400> 145
ttactttgtg acacatttgt tt 22
<210> 146
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC H1
<400> 146
ttgtgacaca tttgtttgag aa 22
<210> 147
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC A2
<400> 147
tgtgacacat ttgtttgaga at 22
<210> 148
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC B2
<400> 148
atttgtttga gaatcaaaat cg 22
<210> 149
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC C2
<400> 149
ttcctgtgat gtcaagctgg tc 22
<210> 150
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC D2
<400> 150
tcctgtgatg tcaagctggt cg 22
<210> 151
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC E2
<400> 151
gtcaagctgg tcgagaaaag ct 22
<210> 152
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC F2
<400> 152
agcttgacat cacaggaact tt 22
<210> 153
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC G2
<400> 153
gacatcacag gaactttcta aa 22
<210> 154
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC H2
<400> 154
ttacagatac gaacctaaac tt 22
<210> 155
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC A3
<400> 155
aaaacctgtc agtgattggg tt 22
<210> 156
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC B3
<400> 156
gattgggttc cgaatcctcc tc 22
<210> 157
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC C3
<400> 157
ggaacccaat cactgacagg tt 22
<210> 158
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRAC target site
<220>
<223> description: MG3-6/3-4 TRAC D3
<400> 158
ttgaaagttt aggttcgtat ct 22
<210> 159
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M A1
<400> 159
ucacgcugga uagccuccag gcguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 160
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M B1
<400> 160
gguuuacuca cgucauccag caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 161
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M C1
<400> 161
acucacguca uccagcagag aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 162
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M D1
<400> 162
ucauccagca gagaauggaa agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 163
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M E1
<400> 163
agagaaugga aagucaaauu ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 164
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M F1
<400> 164
cgacauugaa guugacuuac ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 165
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M G1
<400> 165
uugacuuacu gaagaaugga gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 166
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M H1
<400> 166
uuacugaaga auggagagag aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 167
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M A2
<400> 167
uacugaagaa uggagagaga auguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 168
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 B2M B2
<400> 168
acugaagaau ggagagagaa uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 169
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M C2
<400> 169
ucuuucuauc ucuuguacua caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 170
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M D2
<400> 170
uacuacacug aauucacccc caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 171
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M E2
<400> 171
acuacacuga auucaccccc acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 172
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M F2
<400> 172
cuacacugaa uucaccccca cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 173
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M G2
<400> 173
auacucaucu uuuucagugg ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 174
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M H2
<400> 174
gaauucagug uaguacaaga gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 175
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M A3
<400> 175
gagauagaaa gaccaguccu ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 176
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M B3
<400> 176
caguccuugc ugaaagacaa guguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 177
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M C3
<400> 177
agucaacuuc aaugucggau ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 178
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M D3
<400> 178
aaacccagac acauagcaau ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 179
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M E3
<400> 179
aacccagaca cauagcaauu caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 180
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M F3
<400> 180
cugcuggaug acgugaguaa acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 181
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M G3
<400> 181
accugaaucu uuggaguacc ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 182
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M H3
<400> 182
ugcugcuuac augucucgau cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 183
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M A4
<400> 183
gcugcuuaca ugucucgauc uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 184
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: B2M-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG 3-6/3-4B 2M B4
<400> 184
cugcuuacau gucucgaucu auguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 185
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M A1
<400> 185
tcacgctgga tagcctccag gc 22
<210> 186
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M B1
<400> 186
ggtttactca cgtcatccag ca 22
<210> 187
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M C1
<400> 187
actcacgtca tccagcagag aa 22
<210> 188
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M D1
<400> 188
tcatccagca gagaatggaa ag 22
<210> 189
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M E1
<400> 189
agagaatgga aagtcaaatt tc 22
<210> 190
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M F1
<400> 190
cgacattgaa gttgacttac tg 22
<210> 191
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M G1
<400> 191
ttgacttact gaagaatgga ga 22
<210> 192
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M H1
<400> 192
ttactgaaga atggagagag aa 22
<210> 193
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M A2
<400> 193
tactgaagaa tggagagaga at 22
<210> 194
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG3-6/3-4 B2M B2
<400> 194
actgaagaat ggagagagaa tt 22
<210> 195
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M C2
<400> 195
tctttctatc tcttgtacta ca 22
<210> 196
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M D2
<400> 196
tactacactg aattcacccc ca 22
<210> 197
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M E2
<400> 197
actacactga attcaccccc ac 22
<210> 198
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M F2
<400> 198
ctacactgaa ttcaccccca ct 22
<210> 199
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M G2
<400> 199
atactcatct ttttcagtgg gg 22
<210> 200
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M H2
<400> 200
gaattcagtg tagtacaaga ga 22
<210> 201
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M A3
<400> 201
gagatagaaa gaccagtcct tg 22
<210> 202
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M B3
<400> 202
cagtccttgc tgaaagacaa gt 22
<210> 203
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M C3
<400> 203
agtcaacttc aatgtcggat gg 22
<210> 204
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M D3
<400> 204
aaacccagac acatagcaat tc 22
<210> 205
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M E3
<400> 205
aacccagaca catagcaatt ca 22
<210> 206
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M F3
<400> 206
ctgctggatg acgtgagtaa ac 22
<210> 207
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M G3
<400> 207
acctgaatct ttggagtacc tg 22
<210> 208
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M H3
<400> 208
tgctgcttac atgtctcgat ct 22
<210> 209
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M A4
<400> 209
gctgcttaca tgtctcgatc ta 22
<210> 210
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of B2M target site
<220>
<223> description: MG 3-6/3-4B 2M B4
<400> 210
ctgcttacat gtctcgatct at 22
<210> 211
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 A1
<400> 211
cagaagcaga gaucucccac acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 212
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 B1
<400> 212
ccacguggag cugagcuggu ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 213
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 C1
<400> 213
aguccaguuc uacgggcucu cgguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 214
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 D1
<400> 214
gauuagguga gaccagcuac caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 215
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 E1
<400> 215
auuaggugag accagcuacc agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 216
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 F1
<400> 216
uuaggugaga ccagcuacca ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 217
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 G1
<400> 217
ugagaccagc uaccagggaa aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 218
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 H1
<400> 218
cagguagcag acaagacuag auguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 219
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 A2
<400> 219
agguagcaga caagacuaga ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 220
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 B2
<400> 220
agcagacaag acuagaucca aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 221
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 C2
<400> 221
ggaaccagcg cacaccauga agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 222
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 D2
<400> 222
guggcugaca ucugcauggc agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 223
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 E2
<400> 223
ggccugggag ucugugccaa cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 224
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 F2
<400> 224
cugacuuuac uuuuaauugc cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 225
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 G2
<400> 225
ugacuuuacu uuuaauugcc uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 226
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 H2
<400> 226
gacuuuacuu uuaauugccu auguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 227
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 A3
<400> 227
gggaaggaga agcuggaguc acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 228
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 B3
<400> 228
ggaaggagaa gcuggaguca ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 229
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 C3
<400> 229
aacuccuggc ucuuaauaac ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 230
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 D3
<400> 230
aacuuucucu ucugcagguc aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 231
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 E3
<400> 231
acuccacuuc cagggcugcc uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 232
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 F3
<400> 232
cuccacuucc agggcugccu ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 233
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 G3
<400> 233
uccuuucucu ugaccugcag aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 234
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 H3
<400> 234
agccaggagu ugugaggauu gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 235
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 A4
<400> 235
aguaguaggg cccauugacc acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 236
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 B4
<400> 236
ugcaaguuau cuucugaggc acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 237
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 C4
<400> 237
aguuaucuuc ugaggcaccu gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 238
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 D4
<400> 238
guuaucuucu gaggcaccug aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 239
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 E4
<400> 239
ucaagaacca ugagagaggg agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 240
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 F4
<400> 240
caagaaccau gagagaggga gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 241
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 G4
<400> 241
uuacccgagg uaaagccaca guguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 242
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 H4
<400> 242
ccgagguaaa gccacagucu gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 243
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 A5
<400> 243
cagucugaaa gaaagcaggg agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 244
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 B5
<400> 244
agucugaaag aaagcaggga gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 245
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 C5
<400> 245
gucugaaaga aagcagggag agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 246
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 D5
<400> 246
gaaagaaagc agggagagga aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 247
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 E5
<400> 247
gagaccuuau uuucauaggc aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 248
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 F5
<400> 248
gaugagaguu acacaggcca caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 249
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 G5
<400> 249
agcugcuugg cucuguuggg cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 250
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 H5
<400> 250
uguugggcug agaaucuggg agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 251
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 1-targeted MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC1 A6
<400> 251
ggaacaccuu guucaggucc ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 252
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 A1
<400> 252
cagaagcaga gatctcccac ac 22
<210> 253
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 B1
<400> 253
ccacgtggag ctgagctggt gg 22
<210> 254
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 C1
<400> 254
agtccagttc tacgggctct cg 22
<210> 255
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 D1
<400> 255
gattaggtga gaccagctac ca 22
<210> 256
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 E1
<400> 256
attaggtgag accagctacc ag 22
<210> 257
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 F1
<400> 257
ttaggtgaga ccagctacca gg 22
<210> 258
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 G1
<400> 258
tgagaccagc taccagggaa aa 22
<210> 259
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 H1
<400> 259
caggtagcag acaagactag at 22
<210> 260
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 A2
<400> 260
aggtagcaga caagactaga tc 22
<210> 261
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 B2
<400> 261
agcagacaag actagatcca aa 22
<210> 262
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 C2
<400> 262
ggaaccagcg cacaccatga ag 22
<210> 263
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 D2
<400> 263
gtggctgaca tctgcatggc ag 22
<210> 264
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 E2
<400> 264
ggcctgggag tctgtgccaa ct 22
<210> 265
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 F2
<400> 265
ctgactttac ttttaattgc ct 22
<210> 266
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 G2
<400> 266
tgactttact tttaattgcc ta 22
<210> 267
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 H2
<400> 267
gactttactt ttaattgcct at 22
<210> 268
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 A3
<400> 268
gggaaggaga agctggagtc ac 22
<210> 269
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 B3
<400> 269
ggaaggagaa gctggagtca cc 22
<210> 270
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 C3
<400> 270
aactcctggc tcttaataac cc 22
<210> 271
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 D3
<400> 271
aactttctct tctgcaggtc aa 22
<210> 272
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 E3
<400> 272
actccacttc cagggctgcc tt 22
<210> 273
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 F3
<400> 273
ctccacttcc agggctgcct tc 22
<210> 274
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 G3
<400> 274
tcctttctct tgacctgcag aa 22
<210> 275
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 H3
<400> 275
agccaggagt tgtgaggatt ga 22
<210> 276
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 A4
<400> 276
agtagtaggg cccattgacc ac 22
<210> 277
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 B4
<400> 277
tgcaagttat cttctgaggc ac 22
<210> 278
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 C4
<400> 278
agttatcttc tgaggcacct ga 22
<210> 279
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 D4
<400> 279
gttatcttct gaggcacctg aa 22
<210> 280
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 E4
<400> 280
tcaagaacca tgagagaggg ag 22
<210> 281
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 F4
<400> 281
caagaaccat gagagaggga ga 22
<210> 282
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 G4
<400> 282
ttacccgagg taaagccaca gt 22
<210> 283
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 H4
<400> 283
ccgaggtaaa gccacagtct ga 22
<210> 284
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 A5
<400> 284
cagtctgaaa gaaagcaggg ag 22
<210> 285
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 B5
<400> 285
agtctgaaag aaagcaggga ga 22
<210> 286
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 C5
<400> 286
gtctgaaaga aagcagggag ag 22
<210> 287
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 D5
<400> 287
gaaagaaagc agggagagga aa 22
<210> 288
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 E5
<400> 288
gagaccttat tttcataggc aa 22
<210> 289
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 F5
<400> 289
gatgagagtt acacaggcca ca 22
<210> 290
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 G5
<400> 290
agctgcttgg ctctgttggg ct 22
<210> 291
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 H5
<400> 291
tgttgggctg agaatctggg ag 22
<210> 292
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC1 target site
<220>
<223> description: MG3-6/3-4 TRBC1 A6
<400> 292
ggaacacctt gttcaggtcc tc 22
<210> 293
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 A1
<400> 293
accucuuccc uuuccagagg acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 294
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 B1
<400> 294
ccucuucccu uuccagagga ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 295
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 C1
<400> 295
cucuucccuu uccagaggac cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 296
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 D1
<400> 296
cagaagcaga gaucucccac acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 297
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 E1
<400> 297
ccacguggag cugagcuggu ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 298
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 F1
<400> 298
aguccaguuc uacgggcucu cgguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 299
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 G1
<400> 299
gauuagguga gaccagcuac caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 300
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 H1
<400> 300
auuaggugag accagcuacc agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 301
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 A2
<400> 301
uuaggugaga ccagcuacca ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 302
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 B2
<400> 302
ugagaccagc uaccagggaa aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 303
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 C2
<400> 303
uagcggacaa gacuagaucc agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 304
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 D2
<400> 304
cccccaccaa gaagcauaga ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 305
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 E2
<400> 305
ucugcucucg aaccagggca ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 306
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 F2
<400> 306
ggaacaucac acaugggcau aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 307
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 G2
<400> 307
ccuaauauau ccuaucaccu caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 308
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 H2
<400> 308
accauaauga agccagacug ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 309
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 A3
<400> 309
ccauaaugaa gccagacugg ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 310
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 B3
<400> 310
cauaaugaag ccagacuggg gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 311
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 C3
<400> 311
gccagacugg ggagaaaaug caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 312
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 D3
<400> 312
ggagaaaaug cagggaauau caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 313
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 E3
<400> 313
ggagacaacc agcgagcccu acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 314
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 F3
<400> 314
uacuccugcu gugccauagc ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 315
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 G3
<400> 315
cugugccaua gccccugaaa ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 316
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 H3
<400> 316
ugugccauag ccccugaaac ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 317
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 A4
<400> 317
gugccauagc cccugaaacc cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 318
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 B4
<400> 318
uguucucucu uccacagguc aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 319
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 C4
<400> 319
gaaaggauuc cagaggcuag cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 320
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 D4
<400> 320
ggaugguuuu ggagcuagcc ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 321
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 E4
<400> 321
cccugguucg agagcagaga cgguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 322
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 F4
<400> 322
agcagagacg gcgaaagaua gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 323
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 G4
<400> 323
gcagagacgg cgaaagauag agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 324
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 H4
<400> 324
cagagacggc gaaagauaga gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 325
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 A5
<400> 325
uuaccggagg ugaagccaca guguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 326
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 B5
<400> 326
cggaggugaa gccacagucu gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 327
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 C5
<400> 327
ggaggugaag ccacagucug aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 328
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 D5
<400> 328
acagucugaa agaaaacagg ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 329
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 E5
<400> 329
cagucugaaa gaaaacaggg gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 330
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 F5
<400> 330
agucugaaag aaaacagggg aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 331
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 G5
<400> 331
gucugaaaga aaacagggga agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 332
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 H5
<400> 332
acaggggaag aaaaauggau gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 333
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 A6
<400> 333
gcgaaguggu cacuaugauc uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 334
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 B6
<400> 334
uuaggaaacc aggaccccag aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 335
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 C6
<400> 335
uauggcuggu ccucagggag acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 336
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 D6
<400> 336
cuaagguguc aggaucugaa ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 337
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: TRBC 2-targeting MG3-6/3-4 sgRNA
<220>
<223> description: MG3-6/3-4 TRBC2 E6
<400> 337
ggaacacguu uuucaggucc ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 338
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 A1
<400> 338
acctcttccc tttccagagg ac 22
<210> 339
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 B1
<400> 339
cctcttccct ttccagagga cc 22
<210> 340
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 C1
<400> 340
ctcttccctt tccagaggac ct 22
<210> 341
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 D1
<400> 341
cagaagcaga gatctcccac ac 22
<210> 342
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 E1
<400> 342
ccacgtggag ctgagctggt gg 22
<210> 343
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 F1
<400> 343
agtccagttc tacgggctct cg 22
<210> 344
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 G1
<400> 344
gattaggtga gaccagctac ca 22
<210> 345
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 H1
<400> 345
attaggtgag accagctacc ag 22
<210> 346
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 A2
<400> 346
ttaggtgaga ccagctacca gg 22
<210> 347
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 B2
<400> 347
tgagaccagc taccagggaa aa 22
<210> 348
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 C2
<400> 348
tagcggacaa gactagatcc ag 22
<210> 349
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 D2
<400> 349
cccccaccaa gaagcataga gg 22
<210> 350
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 E2
<400> 350
tctgctctcg aaccagggca tg 22
<210> 351
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 F2
<400> 351
ggaacatcac acatgggcat aa 22
<210> 352
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 G2
<400> 352
cctaatatat cctatcacct ca 22
<210> 353
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 H2
<400> 353
accataatga agccagactg gg 22
<210> 354
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 A3
<400> 354
ccataatgaa gccagactgg gg 22
<210> 355
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 B3
<400> 355
cataatgaag ccagactggg ga 22
<210> 356
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 C3
<400> 356
gccagactgg ggagaaaatg ca 22
<210> 357
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 D3
<400> 357
ggagaaaatg cagggaatat ca 22
<210> 358
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 E3
<400> 358
ggagacaacc agcgagccct ac 22
<210> 359
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 F3
<400> 359
tactcctgct gtgccatagc cc 22
<210> 360
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 G3
<400> 360
ctgtgccata gcccctgaaa cc 22
<210> 361
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 H3
<400> 361
tgtgccatag cccctgaaac cc 22
<210> 362
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 A4
<400> 362
gtgccatagc ccctgaaacc ct 22
<210> 363
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 B4
<400> 363
tgttctctct tccacaggtc aa 22
<210> 364
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 C4
<400> 364
gaaaggattc cagaggctag ct 22
<210> 365
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 D4
<400> 365
ggatggtttt ggagctagcc tc 22
<210> 366
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 E4
<400> 366
ccctggttcg agagcagaga cg 22
<210> 367
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 F4
<400> 367
agcagagacg gcgaaagata ga 22
<210> 368
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 G4
<400> 368
gcagagacgg cgaaagatag ag 22
<210> 369
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 H4
<400> 369
cagagacggc gaaagataga ga 22
<210> 370
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 A5
<400> 370
ttaccggagg tgaagccaca gt 22
<210> 371
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 B5
<400> 371
cggaggtgaa gccacagtct ga 22
<210> 372
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 C5
<400> 372
ggaggtgaag ccacagtctg aa 22
<210> 373
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 D5
<400> 373
acagtctgaa agaaaacagg gg 22
<210> 374
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 E5
<400> 374
cagtctgaaa gaaaacaggg ga 22
<210> 375
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 F5
<400> 375
agtctgaaag aaaacagggg aa 22
<210> 376
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 G5
<400> 376
gtctgaaaga aaacagggga ag 22
<210> 377
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 H5
<400> 377
acaggggaag aaaaatggat ga 22
<210> 378
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 A6
<400> 378
gcgaagtggt cactatgatc tt 22
<210> 379
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 B6
<400> 379
ttaggaaacc aggaccccag aa 22
<210> 380
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 C6
<400> 380
tatggctggt cctcagggag ac 22
<210> 381
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 D6
<400> 381
ctaaggtgtc aggatctgaa gg 22
<210> 382
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of TRBC2 target site
<220>
<223> description: MG3-6/3-4 TRBC2 E6
<400> 382
ggaacacgtt tttcaggtcc tc 22
<210> 383
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 A1
<400> 383
uuguuccucu aguuauuucc ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 384
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 B1
<400> 384
auuugauucu cuaucuccag agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 385
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 C1
<400> 385
uuugauucuc uaucuccaga gcguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 386
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 D1
<400> 386
aagauuugcu auguuagacg auguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 387
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 E1
<400> 387
agauuugcua uguuagacga ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 388
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 F1
<400> 388
gauuugcuau guuagacgau guguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 389
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 G1
<400> 389
acuuugucca uaagacgaag ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 390
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 H1
<400> 390
agggccaaau uaaugacaua uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 391
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 A2
<400> 391
gggccaaauu aaugacauau uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 392
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 B2
<400> 392
uaugaucuau cgcugcaaac caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 393
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 C2
<400> 393
augaucuauc gcugcaaacc agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 394
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 D2
<400> 394
caaaccagug aaaucaaaga agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 395
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 E2
<400> 395
aaaccaguga aaucaaagaa gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 396
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 F2
<400> 396
acaagucaaa aaugaagagg uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 397
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 G2
<400> 397
gaauauguca cuugaacuca acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 398
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 H2
<400> 398
ucacuugaac ucaacucaaa acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 399
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 A3
<400> 399
ucaaaacuug aaagccuccu agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 400
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 B3
<400> 400
caaaacuuga aagccuccua gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 401
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 C3
<400> 401
aaaacuugaa agccuccuag aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 402
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 D3
<400> 402
aaacuugaaa gccuccuaga agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 403
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 E3
<400> 403
aacuugaaag ccuccuagaa gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 404
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 F3
<400> 404
guucuggagu uucagguuga uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 405
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 G3
<400> 405
cacugguuug cagcgauaga ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 406
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 H3
<400> 406
acugguuugc agcgauagau caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 407
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 A4
<400> 407
cgauagauca uaaaaagacu gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 408
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 B4
<400> 408
cccaacugaa ggaggccauu ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 409
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 C4
<400> 409
ccaacugaag gaggccauug gcguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 410
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 D4
<400> 410
cuugauuuug gcucuggaga uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 411
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 E4
<400> 411
uuuuggcucu ggagauagag aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 412
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 F4
<400> 412
ucuggagaua gagaaucaaa ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 413
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 G4
<400> 413
gaauugucuu gaucaauucu ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 414
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 H4
<400> 414
aauugucuug aucaauucug gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 415
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 A5
<400> 415
ggaggaaaua acuagaggaa caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 416
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 B5
<400> 416
gaggaaauaa cuagaggaac aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 417
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 C5
<400> 417
acucucuaua uccagacuuu ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 418
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 D5
<400> 418
cucucuauau ccagacuuuu guguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 419
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 E5
<400> 419
ucucuauauc cagacuuuug uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 420
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 F5
<400> 420
aacaauuaaa ccaacagcau agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 421
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 G5
<400> 421
auuaaaccaa cagcauaguc aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 422
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 H5
<400> 422
aaccaacagc auagucaaau aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 423
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 A6
<400> 423
accaacagca uagucaaaua aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 424
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 B6
<400> 424
gaugcuauua ucuuguuuuu cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 425
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 C6
<400> 425
aggacuagua uucaagaacc caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 426
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 D6
<400> 426
ggacuaguau ucaagaaccc acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 427
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 E6
<400> 427
aagaacuacu cccuuucuuc agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 428
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 F6
<400> 428
acuacucccu uucuucaguu gaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 429
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 G6
<400> 429
cuacucccuu ucuucaguug aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 430
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 H6
<400> 430
ccuuucuuca guugaaugaa auguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 431
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 A7
<400> 431
ggugcucuug gcuuggaaga uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 432
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 B7
<400> 432
gugcucuugg cuuggaagau agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 433
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 C7
<400> 433
auagagaaau uucugugggu ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 434
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 D7
<400> 434
gaauacuagu ccuucugagc ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 435
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 E7
<400> 435
uuauugauuc uaggcauucc ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 436
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 F7
<400> 436
gucuacugug auguuauauc agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 437
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 G7
<400> 437
cugauauaac aucacaguag acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 438
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 H7
<400> 438
ugauauaaca ucacaguaga caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 439
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 A8
<400> 439
gauauaacau cacaguagac auguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 440
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 B8
<400> 440
cacuuguaug uucaccucug uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 441
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 C8
<400> 441
uauaaauggu gguacauuca gcguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 442
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 D8
<400> 442
ugguacauuc agcaggaaug ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 443
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 E8
<400> 443
guccauggac auuaauucaa caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 444
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 F8
<400> 444
uucaacaucg aauagaugga ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 445
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 G8
<400> 445
auagauggau cacaaaacuu caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 446
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 H8
<400> 446
uucaaugaaa cgugggagaa cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 447
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 A9
<400> 447
aguccccuua ccaucaagcc ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 448
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 B9
<400> 448
uuugugaucc aucuauucga ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 449
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 C9
<400> 449
ugaauuaaug uccauggacu acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 450
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 D9
<400> 450
uuuacgaauu gaguuggaag acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 451
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 E9
<400> 451
ggcaaugucc ccaaugcaau ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 452
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 F9
<400> 452
gcaauguccc caaugcaauc ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 453
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 G9
<400> 453
guuuucuacu ugggaucaca aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 454
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3 H9
<400> 454
ccuuuugcuu ugugauccca agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 455
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3A 10
<400> 455
cuuuugcuuu gugaucccaa guguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 456
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3B 10
<400> 456
uugugauccc aaguagaaaa caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 457
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3C 10
<400> 457
aguugguuuc gugauuuccc aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 458
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3D 10
<400> 458
guugguuucg ugauuuccca agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 459
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3E 10
<400> 459
guuucgugau uucccaagua aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 460
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3F 10
<400> 460
uuccagucuu ccaacucaau ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 461
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3G 10
<400> 461
aguauaucuu cucuaggccc aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 462
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3H 10
<400> 462
guauaucuuc ucuaggccca acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 463
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3A 11
<400> 463
ucuaggccca accaaaauuc ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 464
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3B 11
<400> 464
cuaggcccaa ccaaaauucu ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 465
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3C 11
<400> 465
gcccaaccaa aauucuccug aaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 466
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3D 11
<400> 466
uggugguggc augaugagug ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 467
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3E 11
<400> 467
ggugguggca ugaugagugu ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 468
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3F 11
<400> 468
ugaugagugu ggagaaaaca acguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 469
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3G 11
<400> 469
uguggagaaa acaaccuaaa ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 470
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3H 11
<400> 470
gguaaauaua acaaaccaag agguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 471
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3A 12
<400> 471
gaagaggauu aucuuggaag ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 472
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3B 12
<400> 472
aagaggauua ucuuggaagu cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 473
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3C 12
<400> 473
ucaaaaugga agguuauacu cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 474
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3D 12
<400> 474
caaaauggaa gguuauacuc uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 475
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3E 12
<400> 475
auguugaucc auccaacaga uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 476
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3F 12
<400> 476
cauccaacag auucagaaag cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 477
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting ANGPTL3
<220>
<223> description: MG3-6/3-4 ANGPTL3G 12
<400> 477
gccucaguuc auucaaagcu uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 478
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 A1
<400> 478
ttgttcctct agttatttcc tc 22
<210> 479
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 B1
<400> 479
atttgattct ctatctccag ag 22
<210> 480
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 C1
<400> 480
tttgattctc tatctccaga gc 22
<210> 481
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 D1
<400> 481
aagatttgct atgttagacg at 22
<210> 482
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 E1
<400> 482
agatttgcta tgttagacga tg 22
<210> 483
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 F1
<400> 483
gatttgctat gttagacgat gt 22
<210> 484
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 G1
<400> 484
actttgtcca taagacgaag gg 22
<210> 485
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 H1
<400> 485
agggccaaat taatgacata tt 22
<210> 486
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 A2
<400> 486
gggccaaatt aatgacatat tt 22
<210> 487
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 B2
<400> 487
tatgatctat cgctgcaaac ca 22
<210> 488
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 C2
<400> 488
atgatctatc gctgcaaacc ag 22
<210> 489
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 D2
<400> 489
caaaccagtg aaatcaaaga ag 22
<210> 490
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 E2
<400> 490
aaaccagtga aatcaaagaa ga 22
<210> 491
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 F2
<400> 491
acaagtcaaa aatgaagagg ta 22
<210> 492
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 G2
<400> 492
gaatatgtca cttgaactca ac 22
<210> 493
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 H2
<400> 493
tcacttgaac tcaactcaaa ac 22
<210> 494
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 A3
<400> 494
tcaaaacttg aaagcctcct ag 22
<210> 495
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 B3
<400> 495
caaaacttga aagcctccta ga 22
<210> 496
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 C3
<400> 496
aaaacttgaa agcctcctag aa 22
<210> 497
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 D3
<400> 497
aaacttgaaa gcctcctaga ag 22
<210> 498
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 E3
<400> 498
aacttgaaag cctcctagaa ga 22
<210> 499
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 F3
<400> 499
gttctggagt ttcaggttga tt 22
<210> 500
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 G3
<400> 500
cactggtttg cagcgataga tc 22
<210> 501
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 H3
<400> 501
actggtttgc agcgatagat ca 22
<210> 502
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 A4
<400> 502
cgatagatca taaaaagact ga 22
<210> 503
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 B4
<400> 503
cccaactgaa ggaggccatt gg 22
<210> 504
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 C4
<400> 504
ccaactgaag gaggccattg gc 22
<210> 505
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 D4
<400> 505
cttgattttg gctctggaga ta 22
<210> 506
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 E4
<400> 506
ttttggctct ggagatagag aa 22
<210> 507
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 F4
<400> 507
tctggagata gagaatcaaa tg 22
<210> 508
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 G4
<400> 508
gaattgtctt gatcaattct gg 22
<210> 509
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 H4
<400> 509
aattgtcttg atcaattctg ga 22
<210> 510
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 A5
<400> 510
ggaggaaata actagaggaa ca 22
<210> 511
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 B5
<400> 511
gaggaaataa ctagaggaac aa 22
<210> 512
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 C5
<400> 512
actctctata tccagacttt tg 22
<210> 513
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 D5
<400> 513
ctctctatat ccagactttt gt 22
<210> 514
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 E5
<400> 514
tctctatatc cagacttttg ta 22
<210> 515
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 F5
<400> 515
aacaattaaa ccaacagcat ag 22
<210> 516
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 G5
<400> 516
attaaaccaa cagcatagtc aa 22
<210> 517
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 H5
<400> 517
aaccaacagc atagtcaaat aa 22
<210> 518
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 A6
<400> 518
accaacagca tagtcaaata aa 22
<210> 519
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 B6
<400> 519
gatgctatta tcttgttttt ct 22
<210> 520
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 C6
<400> 520
aggactagta ttcaagaacc ca 22
<210> 521
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 D6
<400> 521
ggactagtat tcaagaaccc ac 22
<210> 522
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 E6
<400> 522
aagaactact ccctttcttc ag 22
<210> 523
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 F6
<400> 523
actactccct ttcttcagtt ga 22
<210> 524
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 G6
<400> 524
ctactccctt tcttcagttg aa 22
<210> 525
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 H6
<400> 525
cctttcttca gttgaatgaa at 22
<210> 526
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 A7
<400> 526
ggtgctcttg gcttggaaga ta 22
<210> 527
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 B7
<400> 527
gtgctcttgg cttggaagat ag 22
<210> 528
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 C7
<400> 528
atagagaaat ttctgtgggt tc 22
<210> 529
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 D7
<400> 529
gaatactagt ccttctgagc tg 22
<210> 530
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 E7
<400> 530
ttattgattc taggcattcc tg 22
<210> 531
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 F7
<400> 531
gtctactgtg atgttatatc ag 22
<210> 532
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 G7
<400> 532
ctgatataac atcacagtag ac 22
<210> 533
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 H7
<400> 533
tgatataaca tcacagtaga ca 22
<210> 534
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 A8
<400> 534
gatataacat cacagtagac at 22
<210> 535
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 B8
<400> 535
cacttgtatg ttcacctctg tt 22
<210> 536
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 C8
<400> 536
tataaatggt ggtacattca gc 22
<210> 537
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 D8
<400> 537
tggtacattc agcaggaatg cc 22
<210> 538
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 E8
<400> 538
gtccatggac attaattcaa ca 22
<210> 539
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 F8
<400> 539
ttcaacatcg aatagatgga tc 22
<210> 540
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 G8
<400> 540
atagatggat cacaaaactt ca 22
<210> 541
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 H8
<400> 541
ttcaatgaaa cgtgggagaa ct 22
<210> 542
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 A9
<400> 542
agtcccctta ccatcaagcc tc 22
<210> 543
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 B9
<400> 543
tttgtgatcc atctattcga tg 22
<210> 544
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 C9
<400> 544
tgaattaatg tccatggact ac 22
<210> 545
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 D9
<400> 545
tttacgaatt gagttggaag ac 22
<210> 546
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 E9
<400> 546
ggcaatgtcc ccaatgcaat cc 22
<210> 547
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 F9
<400> 547
gcaatgtccc caatgcaatc cc 22
<210> 548
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 G9
<400> 548
gttttctact tgggatcaca aa 22
<210> 549
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3 H9
<400> 549
ccttttgctt tgtgatccca ag 22
<210> 550
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3A 10
<400> 550
cttttgcttt gtgatcccaa gt 22
<210> 551
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3B 10
<400> 551
ttgtgatccc aagtagaaaa ca 22
<210> 552
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3C 10
<400> 552
agttggtttc gtgatttccc aa 22
<210> 553
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3D 10
<400> 553
gttggtttcg tgatttccca ag 22
<210> 554
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3E 10
<400> 554
gtttcgtgat ttcccaagta aa 22
<210> 555
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3F 10
<400> 555
ttccagtctt ccaactcaat tc 22
<210> 556
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3G 10
<400> 556
agtatatctt ctctaggccc aa 22
<210> 557
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3H 10
<400> 557
gtatatcttc tctaggccca ac 22
<210> 558
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3A 11
<400> 558
tctaggccca accaaaattc tc 22
<210> 559
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3B 11
<400> 559
ctaggcccaa ccaaaattct cc 22
<210> 560
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3C 11
<400> 560
gcccaaccaa aattctcctg aa 22
<210> 561
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3D 11
<400> 561
tggtggtggc atgatgagtg tg 22
<210> 562
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3E 11
<400> 562
ggtggtggca tgatgagtgt gg 22
<210> 563
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3F 11
<400> 563
tgatgagtgt ggagaaaaca ac 22
<210> 564
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3G 11
<400> 564
tgtggagaaa acaacctaaa tg 22
<210> 565
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3H 11
<400> 565
ggtaaatata acaaaccaag ag 22
<210> 566
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3A 12
<400> 566
gaagaggatt atcttggaag tc 22
<210> 567
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3B 12
<400> 567
aagaggatta tcttggaagt ct 22
<210> 568
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3C 12
<400> 568
tcaaaatgga aggttatact ct 22
<210> 569
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3D 12
<400> 569
caaaatggaa ggttatactc ta 22
<210> 570
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3E 12
<400> 570
atgttgatcc atccaacaga tt 22
<210> 571
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3F 12
<400> 571
catccaacag attcagaaag ct 22
<210> 572
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of ANGPTL3 target site
<220>
<223> description: MG3-6/3-4 ANGPTL3G 12
<400> 572
gcctcagttc attcaaagct tt 22
<210> 573
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 A1
<400> 573
accccuccac gguaccgggc ggguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 574
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 B1
<400> 574
accagcauac agagugacca ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 575
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 C1
<400> 575
ccagcauaca gagugaccac cgguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 576
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 D1
<400> 576
cagggucaug gucaccgacu ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 577
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 E1
<400> 577
ccucccaggc cuggaguuua uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 578
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 F1
<400> 578
cucccaggcc uggaguuuau ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 579
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 G1
<400> 579
caggcuggac cagcuggcuu uuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 580
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 H1
<400> 580
gguggcccca acugugauga ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 581
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 A2
<400> 581
gccccgccgc uucccacucc ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 582
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 B2
<400> 582
agugugcuga ccauacaguc cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 583
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 C2
<400> 583
ccugcaaaac agcugccaac cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 584
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 D2
<400> 584
cugcaaaaca gcugccaacc ugguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 585
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 E2
<400> 585
aauggcguag acacccucac ccguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 586
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 F2
<400> 586
uccugcugcc augccccagg ucguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 587
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting PCSK9
<220>
<223> description: MG3-6/3-4 PCSK9 G2
<400> 587
uggaaugcaa agucaaggag caguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 588
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 A1
<400> 588
acccctccac ggtaccgggc gg 22
<210> 589
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 B1
<400> 589
accagcatac agagtgacca cc 22
<210> 590
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 C1
<400> 590
ccagcataca gagtgaccac cg 22
<210> 591
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 D1
<400> 591
cagggtcatg gtcaccgact tc 22
<210> 592
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 E1
<400> 592
cctcccaggc ctggagttta tt 22
<210> 593
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 F1
<400> 593
ctcccaggcc tggagtttat tc 22
<210> 594
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 G1
<400> 594
caggctggac cagctggctt tt 22
<210> 595
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 H1
<400> 595
ggtggcccca actgtgatga cc 22
<210> 596
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 A2
<400> 596
gccccgccgc ttcccactcc tg 22
<210> 597
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 B2
<400> 597
agtgtgctga ccatacagtc ct 22
<210> 598
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 C2
<400> 598
cctgcaaaac agctgccaac ct 22
<210> 599
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 D2
<400> 599
ctgcaaaaca gctgccaacc tg 22
<210> 600
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 E2
<400> 600
aatggcgtag acaccctcac cc 22
<210> 601
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 F2
<400> 601
tcctgctgcc atgccccagg tc 22
<210> 602
<211> 22
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic oligonucleotides
<220>
<223> category: DNA sequence of PSCK9 target site
<220>
<223> description: MG3-6/3-4 PCSK9 G2
<400> 602
tggaatgcaa agtcaaggag ca 22
<210> 603
<211> 3705
<212> DNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 coding sequence
<220>
<223> description: DNA sequence of MG3-6/3-4 coding sequence
<400> 603
atgcatgcgc ggccgcaagc tttaatacga ctcactataa ggaaaagcca gctccagcag 60
gcgctgctca ctcctcccca tcctctccct ctgtccctct gtccctctga ccctgcactg 120
tcccagcacc atggccccca agaagaagcg gaaagttggc ggcggaggca gcagcaccga 180
catgaagaac taccggatcg gcgtggacgt gggcgataga tctgttggac tggccgccat 240
cgagttcgac gatgatggac tgcccatcca gaagctggcc ctggtcacct ttagacacga 300
tggcggactg gaccccacca agaacaagac ccctatgagc cggaaagaga cacggggaat 360
cgccagacgg accatgcgga tgaacagaga gcggaagcgg cggctgagaa acctggacaa 420
cgtgctggaa aacctgggct actctgtgcc tgagggccct gagcctgaga catatgaggc 480
ctggacaagc agagccctgc tggcctctat caaactggcc tctgccgacg agctgaacga 540
acaccttgtc agagccgtgc ggcacatggc cagacataga ggatgggcca atccttggtg 600
gtccctggac cagctggaaa aggccagcca agagcctagc gagacattcg agatcatcct 660
ggccagagcc agagagctgt tcggcgagaa ggtgcccgct aatcctacac tgggaatgct 720
gggagccctg gccgctaaca atgaggtgct gctgaggccc agggacgaga agaagagaaa 780
gaccggatac gtgcggggca cccctctgat gtttgctcaa gttcgacagg gcgatcagct 840
ggccgagctg cggagaattt gtgaagtgca gggcatcgag gaccagtacg aggctctgag 900
actgggcgtg ttcgaccaca agcaccccta cgtgcccaaa gaaagagtgg gcaaagaccc 960
tctgaacccc agcaccaaca gaaccatcag agccagcctg gaatttcaag agttccgcat 1020
cctggacagc gtggccaatc tgagagtgcg gatcggcagc agagccaaga gggaactgac 1080
agaggccgag tatgatgccg ccgtggaatt cctgatggac tacgccgaca aagagcagcc 1140
tagctgggcc gatgtggccg agaaaattgg cgtgcccggc aacagactgg tggcccctgt 1200
tctggaagat gtgcagcaga aaacagcccc ttacgacaga agcagcgccg cctttgagaa 1260
ggccatgggc aagaaaaccg aggccagaca gtggtgggag tccaccgatg atgaccagct 1320
gagaagcctg ctgattgcct tcctggtgga cgccaccaac gacacagaag aagccgctgc 1380
tgaagccggc ctgagcgagc tgtataagtc ttggcctgcc gaggaaagag aggccctgtc 1440
caacatcgac ttcgagaagg gcagagtggc ctacagccaa gaaaccctga gcaagctgag 1500
cgagtacatg cacgagtaca gagtgggact gcacgaggct agaaaggccg tgttcggagt 1560
ggatgatacc tggcggcctc ctctggataa gctggaagaa cctacaggac agcctgccgt 1620
ggacagagtg ctgaccatcc tgagaagatt cgtgctggac tgcgagcggc aatggggcag 1680
acctagagcc atcaccgtgg aacacacacg gacaggcctg atgggcccaa cacagagaca 1740
gaagatcctg aacgagcaga agaagaaccg ggccgacaac gagagaatcc gggatgagct 1800
gagagaatct ggcgtggaca acccctccag agccgaagtt cggagacacc tgatcgtgca 1860
agagcaagag tgccagtgcc tgtactgcgg caccatgatc accaccacca caagcgagct 1920
ggaccacatc gttcctagag ccggtggcgg cagcagcaga agggaaaatc tggccgctgt 1980
gtgcagagcc tgcaacgcca agaagaaacg cgagctgttc tacgcctggg ctggcccagt 2040
gaagtcccaa gagacaatcg agagagtcag acagctgaag gcctttaagg acagcaagaa 2100
agccaagatg ttcaagaacc agatccgccg gctgaaccag accgaggccg atgagcctat 2160
cgacgaaaga agcctggcca gcacatctta cgccgctgtg gccgttagag agcggctgga 2220
acagcacttc aacgaaggcc tggcactgga cgacaagtcc agagtggtgc tggatgtgta 2280
tgccggcgct gtgaccagag agtctcgtag agctggcggc atcgacgagc ggattctgct 2340
gagaggcgag cgggacaaga acagattcga tgtgcggcat cacgccgtgg acgctgctgt 2400
tatgaccctg ctgaacagat ccgtggctct gaccctggaa cagagatcac agctgaggcg 2460
ggccttctac gagctggaac tggacaaact ggaccgggac cagctcaagc ctggcgagga 2520
ttggagaaac ttcaccggcc tgtacgaggc ctctcagaac aagttcagcg agtggaagaa 2580
agccgccaca gtgctgggag atctgctggc tgaagccatc gaggatgacg ccattgccgt 2640
ggtgtctcca ctgagactga ggccccagaa tggcagcgtg cacgacgata ccatcaacgc 2700
cgtgaagaag ctgacactgg gctctgcctg gcctgcagac gctgtgaaga gaatcgtgga 2760
ccccgagatc tacctggcta tgaaggacgt gctgggcaag ctgaaagagc tgcccgagga 2820
ttctgccaga tctctggaac tgtccgacgg ccggtacatc gaagccgatg acgaggtgct 2880
gttcttccca aagaaggccg ctagcatcct gacacctaga ggcgccgctg agatcggcaa 2940
ctctatccac catgccagac tgtatagctg gctgaccaag aagggcgagc tgaagtttgg 3000
catgctgaga gtgtacggcg ccgagtttcc ctggctgatg agagagtctg gaagccgcga 3060
cgtgctgcat atgcctattc accctggcag ccagagcttc agaggcatgc aggatggcgt 3120
gcggaaagcc gtggaaagcg gagaggctgt ggaattcggc tggatcaccc aggacgatga 3180
gctggaattc gaccccgagg actacattgc ccacggcgga gatgacgaac tgaacagact 3240
gctgcgagtg atgcccgaga gaaggtggcg agtggacggc ttctataacg ccggcacact 3300
gagaatcaga cccgctctgc tgtctgctga gcagctgcct tctgagctgc agaaaaaggt 3360
ggccgacaag accctgagcg acgtggaact gatcctgctg agggctgttc agcggggact 3420
gttcgtggcc atcagcagct ttctgcccct ggaaagcctg aaagtgatcc ggcggaacaa 3480
tctgggcttc cccaggtggc gcggaaacgg aaatctgccc accagctttg aagtgcggag 3540
cagcgctctg agagccctgg gagttgaagg atctggcgga aaaagacctg ccgccacaaa 3600
gaaagccgga caggccaaga aaaagaagtg accacacccc cattccccca ctccagatag 3660
aacttcagtt atatctcacg tgtctggagt tggatccatg catgc 3705
<210> 604
<211> 1166
<212> PRT
<213> artificial sequence
<220>
<223> description of artificial sequence: synthetic polypeptides
<220>
<223> category: MG3-6/3-4 box coding sequence
<220>
<223> description: protein sequence (including NLS) of MG3-6/3-4 box coding sequence
<400> 604
Met Ala Pro Lys Lys Lys Arg Lys Val Gly Gly Gly Gly Ser Ser Thr
1 5 10 15
Asp Met Lys Asn Tyr Arg Ile Gly Val Asp Val Gly Asp Arg Ser Val
20 25 30
Gly Leu Ala Ala Ile Glu Phe Asp Asp Asp Gly Leu Pro Ile Gln Lys
35 40 45
Leu Ala Leu Val Thr Phe Arg His Asp Gly Gly Leu Asp Pro Thr Lys
50 55 60
Asn Lys Thr Pro Met Ser Arg Lys Glu Thr Arg Gly Ile Ala Arg Arg
65 70 75 80
Thr Met Arg Met Asn Arg Glu Arg Lys Arg Arg Leu Arg Asn Leu Asp
85 90 95
Asn Val Leu Glu Asn Leu Gly Tyr Ser Val Pro Glu Gly Pro Glu Pro
100 105 110
Glu Thr Tyr Glu Ala Trp Thr Ser Arg Ala Leu Leu Ala Ser Ile Lys
115 120 125
Leu Ala Ser Ala Asp Glu Leu Asn Glu His Leu Val Arg Ala Val Arg
130 135 140
His Met Ala Arg His Arg Gly Trp Ala Asn Pro Trp Trp Ser Leu Asp
145 150 155 160
Gln Leu Glu Lys Ala Ser Gln Glu Pro Ser Glu Thr Phe Glu Ile Ile
165 170 175
Leu Ala Arg Ala Arg Glu Leu Phe Gly Glu Lys Val Pro Ala Asn Pro
180 185 190
Thr Leu Gly Met Leu Gly Ala Leu Ala Ala Asn Asn Glu Val Leu Leu
195 200 205
Arg Pro Arg Asp Glu Lys Lys Arg Lys Thr Gly Tyr Val Arg Gly Thr
210 215 220
Pro Leu Met Phe Ala Gln Val Arg Gln Gly Asp Gln Leu Ala Glu Leu
225 230 235 240
Arg Arg Ile Cys Glu Val Gln Gly Ile Glu Asp Gln Tyr Glu Ala Leu
245 250 255
Arg Leu Gly Val Phe Asp His Lys His Pro Tyr Val Pro Lys Glu Arg
260 265 270
Val Gly Lys Asp Pro Leu Asn Pro Ser Thr Asn Arg Thr Ile Arg Ala
275 280 285
Ser Leu Glu Phe Gln Glu Phe Arg Ile Leu Asp Ser Val Ala Asn Leu
290 295 300
Arg Val Arg Ile Gly Ser Arg Ala Lys Arg Glu Leu Thr Glu Ala Glu
305 310 315 320
Tyr Asp Ala Ala Val Glu Phe Leu Met Asp Tyr Ala Asp Lys Glu Gln
325 330 335
Pro Ser Trp Ala Asp Val Ala Glu Lys Ile Gly Val Pro Gly Asn Arg
340 345 350
Leu Val Ala Pro Val Leu Glu Asp Val Gln Gln Lys Thr Ala Pro Tyr
355 360 365
Asp Arg Ser Ser Ala Ala Phe Glu Lys Ala Met Gly Lys Lys Thr Glu
370 375 380
Ala Arg Gln Trp Trp Glu Ser Thr Asp Asp Asp Gln Leu Arg Ser Leu
385 390 395 400
Leu Ile Ala Phe Leu Val Asp Ala Thr Asn Asp Thr Glu Glu Ala Ala
405 410 415
Ala Glu Ala Gly Leu Ser Glu Leu Tyr Lys Ser Trp Pro Ala Glu Glu
420 425 430
Arg Glu Ala Leu Ser Asn Ile Asp Phe Glu Lys Gly Arg Val Ala Tyr
435 440 445
Ser Gln Glu Thr Leu Ser Lys Leu Ser Glu Tyr Met His Glu Tyr Arg
450 455 460
Val Gly Leu His Glu Ala Arg Lys Ala Val Phe Gly Val Asp Asp Thr
465 470 475 480
Trp Arg Pro Pro Leu Asp Lys Leu Glu Glu Pro Thr Gly Gln Pro Ala
485 490 495
Val Asp Arg Val Leu Thr Ile Leu Arg Arg Phe Val Leu Asp Cys Glu
500 505 510
Arg Gln Trp Gly Arg Pro Arg Ala Ile Thr Val Glu His Thr Arg Thr
515 520 525
Gly Leu Met Gly Pro Thr Gln Arg Gln Lys Ile Leu Asn Glu Gln Lys
530 535 540
Lys Asn Arg Ala Asp Asn Glu Arg Ile Arg Asp Glu Leu Arg Glu Ser
545 550 555 560
Gly Val Asp Asn Pro Ser Arg Ala Glu Val Arg Arg His Leu Ile Val
565 570 575
Gln Glu Gln Glu Cys Gln Cys Leu Tyr Cys Gly Thr Met Ile Thr Thr
580 585 590
Thr Thr Ser Glu Leu Asp His Ile Val Pro Arg Ala Gly Gly Gly Ser
595 600 605
Ser Arg Arg Glu Asn Leu Ala Ala Val Cys Arg Ala Cys Asn Ala Lys
610 615 620
Lys Lys Arg Glu Leu Phe Tyr Ala Trp Ala Gly Pro Val Lys Ser Gln
625 630 635 640
Glu Thr Ile Glu Arg Val Arg Gln Leu Lys Ala Phe Lys Asp Ser Lys
645 650 655
Lys Ala Lys Met Phe Lys Asn Gln Ile Arg Arg Leu Asn Gln Thr Glu
660 665 670
Ala Asp Glu Pro Ile Asp Glu Arg Ser Leu Ala Ser Thr Ser Tyr Ala
675 680 685
Ala Val Ala Val Arg Glu Arg Leu Glu Gln His Phe Asn Glu Gly Leu
690 695 700
Ala Leu Asp Asp Lys Ser Arg Val Val Leu Asp Val Tyr Ala Gly Ala
705 710 715 720
Val Thr Arg Glu Ser Arg Arg Ala Gly Gly Ile Asp Glu Arg Ile Leu
725 730 735
Leu Arg Gly Glu Arg Asp Lys Asn Arg Phe Asp Val Arg His His Ala
740 745 750
Val Asp Ala Ala Val Met Thr Leu Leu Asn Arg Ser Val Ala Leu Thr
755 760 765
Leu Glu Gln Arg Ser Gln Leu Arg Arg Ala Phe Tyr Glu Leu Glu Leu
770 775 780
Asp Lys Leu Asp Arg Asp Gln Leu Lys Pro Gly Glu Asp Trp Arg Asn
785 790 795 800
Phe Thr Gly Leu Tyr Glu Ala Ser Gln Asn Lys Phe Ser Glu Trp Lys
805 810 815
Lys Ala Ala Thr Val Leu Gly Asp Leu Leu Ala Glu Ala Ile Glu Asp
820 825 830
Asp Ala Ile Ala Val Val Ser Pro Leu Arg Leu Arg Pro Gln Asn Gly
835 840 845
Ser Val His Asp Asp Thr Ile Asn Ala Val Lys Lys Leu Thr Leu Gly
850 855 860
Ser Ala Trp Pro Ala Asp Ala Val Lys Arg Ile Val Asp Pro Glu Ile
865 870 875 880
Tyr Leu Ala Met Lys Asp Val Leu Gly Lys Leu Lys Glu Leu Pro Glu
885 890 895
Asp Ser Ala Arg Ser Leu Glu Leu Ser Asp Gly Arg Tyr Ile Glu Ala
900 905 910
Asp Asp Glu Val Leu Phe Phe Pro Lys Lys Ala Ala Ser Ile Leu Thr
915 920 925
Pro Arg Gly Ala Ala Glu Ile Gly Asn Ser Ile His His Ala Arg Leu
930 935 940
Tyr Ser Trp Leu Thr Lys Lys Gly Glu Leu Lys Phe Gly Met Leu Arg
945 950 955 960
Val Tyr Gly Ala Glu Phe Pro Trp Leu Met Arg Glu Ser Gly Ser Arg
965 970 975
Asp Val Leu His Met Pro Ile His Pro Gly Ser Gln Ser Phe Arg Gly
980 985 990
Met Gln Asp Gly Val Arg Lys Ala Val Glu Ser Gly Glu Ala Val Glu
995 1000 1005
Phe Gly Trp Ile Thr Gln Asp Asp Glu Leu Glu Phe Asp Pro Glu
1010 1015 1020
Asp Tyr Ile Ala His Gly Gly Asp Asp Glu Leu Asn Arg Leu Leu
1025 1030 1035
Arg Val Met Pro Glu Arg Arg Trp Arg Val Asp Gly Phe Tyr Asn
1040 1045 1050
Ala Gly Thr Leu Arg Ile Arg Pro Ala Leu Leu Ser Ala Glu Gln
1055 1060 1065
Leu Pro Ser Glu Leu Gln Lys Lys Val Ala Asp Lys Thr Leu Ser
1070 1075 1080
Asp Val Glu Leu Ile Leu Leu Arg Ala Val Gln Arg Gly Leu Phe
1085 1090 1095
Val Ala Ile Ser Ser Phe Leu Pro Leu Glu Ser Leu Lys Val Ile
1100 1105 1110
Arg Arg Asn Asn Leu Gly Phe Pro Arg Trp Arg Gly Asn Gly Asn
1115 1120 1125
Leu Pro Thr Ser Phe Glu Val Arg Ser Ser Ala Leu Arg Ala Leu
1130 1135 1140
Gly Val Glu Gly Ser Gly Gly Lys Arg Pro Ala Ala Thr Lys Lys
1145 1150 1155
Ala Gly Gln Ala Lys Lys Lys Lys
1160 1165
<210> 605
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting mouse HAO-1
<220>
<223> description: mH364-7-1
<400> 605
gagcuggcca cugugcgagg uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 606
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting mouse HAO-1
<220>
<223> description: mH364-20-1
<400> 606
uucagcaagu ccacuguugu cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 607
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting mouse HAO-1
<220>
<223> description: mH364-7-35
<400> 607
gagcuggcca cugugcgagg uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 608
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting mouse HAO-1
<220>
<223> description: mH364-20-35
<400> 608
uucagcaagu ccacuguugu cuguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 609
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting mouse HAO-1
<220>
<223> description: mH364-7-42
<400> 609
gagcuggcca cugugcgagg uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110
<210> 610
<211> 110
<212> RNA
<213> artificial sequence
<220>
<223> description of artificial sequence: synthesis of polynucleotides
<220>
<223> category: MG3-6/3-4 sgRNA targeting mouse HAO-1
<220>
<223> description: mH364-7-45
<400> 610
gagcuggcca cugugcgagg uaguugagaa ucgaaagauu cuuaauaagg cauccuuccg 60
augcugacuu cucaccgucc guuuuccaau aggagcgggc gguauguuuu 110

Claims (81)

1. A fusion endonuclease, comprising:
(a) An N-terminal sequence comprising at least a portion of a RuvC domain, REC domain, or HNH domain of an endonuclease having at least 55% sequence identity to SEQ ID No. 696 or a variant thereof; and
(b) A C-terminal sequence comprising a WED, TOPO or CTD domain of an endonuclease having at least 55% sequence identity to any one of SEQ ID NOs 697-721 or a variant thereof, wherein said N-terminal sequence and said C-terminal sequence are not naturally present together in the same reading frame.
2. The fusion endonuclease of claim 1, wherein the N-terminal sequence and the C-terminal sequence are derived from different organisms.
3. The fusion endonuclease of any one of claims 1 or 2, wherein the N-terminal sequence further comprises a RuvC-I, BH or RuvC-II domain.
4. A fusion endonuclease according to any one of claims 1 to 3, wherein the C-terminal sequence further comprises a PAM interaction domain.
5. The fusion endonuclease according to any one of claims 1 to 4, wherein said fusion endonuclease comprises a sequence having at least 55% sequence identity to any one of SEQ ID NOs 1-27 or 108.
6. The fusion endonuclease according to any one of claims 1 to 5, wherein said fusion endonuclease is configured to bind to PAM (SEQ ID NO: 53) that is not nnRGGnT.
7. The fusion endonuclease of claim 6, wherein the fusion endonuclease is configured to bind PAM comprising any one of SEQ ID NOs 46-52 or 54-66.
8. An endonuclease comprising an engineered amino acid sequence having at least 55% sequence identity to any one of SEQ ID NOs 1-27 or 108 or a variant thereof.
9. An endonuclease comprising an engineered amino acid sequence having at least 55% sequence identity to any one of SEQ ID NOs 109-110 or a variant thereof.
10. An engineered nuclease system, comprising:
(a) An endonuclease according to any one of claims 1 to 9; and
(b) An engineered guide ribonucleic acid structure configured to form a complex with the endonuclease, the engineered guide ribonucleic acid structure comprising:
a guide ribonucleic acid configured to hybridize to a target deoxyribonucleic acid sequence; wherein the guide ribonucleic acid sequence is configured to bind to the endonuclease.
11. The engineered nuclease system of claim 10, wherein the guide ribonucleic acid further comprises a tracr ribonucleic acid sequence configured to bind to the endonuclease.
12. The engineered nuclease system of claim 10 or 11, wherein the endonuclease is derived from an uncultured microorganism.
13. The engineered nuclease system of any one of claims 10-12, wherein the endonuclease is not a Cas9 endonuclease, a Cas14 endonuclease, a Cas12a endonuclease, a Cas12b endonuclease, a Cas12 c endonuclease, a Cas12d endonuclease, a Cas12e endonuclease, a Cas13a endonuclease, a Cas13b endonuclease, a Cas13c endonuclease, or a Cas13d endonuclease.
14. The engineered nuclease system of any one of claims 10-13, wherein the endonuclease has less than 86% identity to a SpyCas9 endonuclease.
15. The engineered nuclease system of any one of claims 10-14, wherein the system further comprises Mg 2+ Is a source of (a).
16. The engineered nuclease system of any one of claims 10-15, wherein the endonuclease comprises a sequence having at least 55% sequence identity to any one of SEQ ID NOs 8-12, 26-27 or 108, or a variant thereof.
17. The engineered nuclease system of any one of claims 10-16, wherein the guide ribonucleic acid sequence comprises a sequence having at least 80% identity to a non-degenerate nucleotide of any one of SEQ ID NOs 33, 34, 44, 45, 78, 84, or 87.
18. An engineered nuclease, comprising:
(a) A class II, type II Cas enzyme RuvC and HNH domain, or variants thereof, having at least 55% sequence identity to the RuvC and HNH domain of any one of SEQ ID NOs 1-27, 108 or 109-110; and
(b) A class II, type II Cas enzyme PAM Interaction (PI) domain or variant thereof, the class II, type II Cas enzyme PI domain having at least 55% sequence identity to a PAM Interaction (PI) domain of any one of SEQ ID NOs 1-27, 108 or 109-110.
19. The engineered nuclease of claim 18, wherein (a) and (b) do not naturally occur together.
20. The engineered nuclease of claim 18 or 19, wherein the class II, type II Cas enzyme is derived from an uncultured microorganism.
21. The engineered nuclease of any one of claims 18-20, wherein the endonuclease has less than 86% identity to a SpyCas9 endonuclease.
22. The engineered nuclease of any one of claims 18-21, wherein the engineered nuclease comprises a sequence having at least 55% sequence identity to any one of SEQ ID NOs 1-27.
23. An engineered nuclease system, comprising:
(a) An endonuclease according to any one of claims 18 to 22; and
(b) An engineered guide ribonucleic acid structure configured to form a complex with the endonuclease, the engineered guide ribonucleic acid structure comprising:
i. a guide ribonucleic acid sequence configured to hybridize to a target deoxyribonucleic acid sequence and configured to bind to the endonuclease.
24. The engineered nuclease system of claim 23, wherein the guide ribonucleic acid further comprises a tracr ribonucleic acid sequence configured to bind to the endonuclease.
25. The engineered nuclease system of claim 23 or 24, wherein the guide ribonucleic acid sequence comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of any one of SEQ ID NOs 28-32 or 33-44, or a variant thereof.
26. The engineered nuclease system of any one of claims 23-25, further comprising a PAM sequence compatible with the nuclease adjacent to the target nucleic acid site.
27. The engineered nuclease system of claim 26, wherein the PAM sequence is located 3' to the target deoxyribonucleic acid sequence.
28. The engineered nuclease system of any one of claims 26 to 27, wherein the PAM sequence comprises any one of SEQ ID NOs 46-66.
29. A method of targeting an albumin gene, the method comprising introducing the system according to any one of claims 23 to 28 into a cell, wherein the guide ribonucleic acid sequence is configured to hybridize to a sequence comprising any one of SEQ ID NOs 67-86.
30. A method of targeting HAO1 gene, the method comprising introducing the system of any one of claims 23 to 28 into a cell, wherein the guide ribonucleic acid sequence is configured to hybridize to any one of SEQ ID NOs 611-633.
31. The method of claim 30, wherein the guide ribonucleic acid sequence is configured to hybridize to any of SEQ ID NOs 615, 618, 620, 624, or 626.
32. The method of claim 30, wherein the guide ribonucleic acid comprises a sequence according to any one of SEQ ID NOs 645-684.
33. The method of claim 32, wherein the guide ribonucleic acid comprises a sequence having at least 80% identity to any one of SEQ ID NOs 645-649, 652-656, 660-671, 674-675, or 681-684 or a sequence having at least 80% identity to a targeting sequence of any one of SEQ ID NOs 645-649, 652-656, 660-671, 674-675, or 681-684.
34. A method of disrupting a HAO-1 locus in a cell, the method comprising introducing into the cell:
(a) Class 2, type II Cas endonuclease; and
(b) An engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the HAO-1 locus,
wherein the engineered guide RNA is configured to hybridize to or comprise: targeting sequences having at least 80% identity to SEQ ID NO 611-626 or 627-633.
35. The method of claim 34, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease according to any one of claims 1 to 9 or 18 to 22.
36. The method of claim 34 or 35, wherein the class 2, type II Cas endonuclease comprises a sequence having at least 55% identity to SEQ ID No. 10 or a variant thereof.
37. The method of any one of claims 34 to 36, wherein the engineered guide RNA comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of SEQ ID No. 722.
38. The method of any one of claims 34 to 36, wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOs 618, 620, 624 or 626 or a sequence having at least 80% identity to a targeting sequence of any one of SEQ ID NOs 618, 620, 624 or 626.
39. The method of any one of claims 34 to 36, wherein the engineered guide RNA comprises a nucleotide sequence of any one of the guide RNAs of table 9 or table 12.
40. A method of disrupting a TRAC locus in a cell, the method comprising introducing into the cell:
(a) Class 2, type II Cas endonuclease; and
(b) An engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the TRAC locus,
wherein the engineered guide RNA is configured to hybridize to or comprise: a targeting sequence having at least 80% identity to SEQ ID NO 139-158; or (b)
Wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOS 119-138.
41. The method of claim 40, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease according to any one of claims 1 to 9 or 18 to 22.
42. The method of claim 40 or 41, wherein the class 2, type II Cas endonuclease comprises the fusion endonuclease having at least 55% identity to SEQ ID No. 10 or a variant thereof.
43. The method of any one of claims 40 to 42, wherein the engineered guide RNA comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of SEQ ID No. 722.
44. The method of any one of claims 40 to 42, wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOs 121, 132, 136, 130, 134, 135 or 137 or a sequence having at least 80% identity to a targeting sequence of any one of SEQ ID NOs 121, 132, 136, 130, 134, 135 or 137.
45. The method of any one of claims 40 to 42, wherein the engineered guide RNA comprises the nucleotide sequence of any one of the guide RNAs of table 7A.
46. A method of disrupting a B2M locus in a cell, the method comprising introducing into the cell:
(a) Class 2, type II Cas endonuclease; and
(b) An engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the B2M locus,
wherein the engineered guide RNA is configured to hybridize to or comprise: a targeting sequence having at least 80% identity to SEQ ID NO. 185-210; or (b)
Wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOS 159-184.
47. The method of claim 46, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease according to any one of claims 1 to 9 or 18 to 22.
48. The method of claim 46 or 47, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease comprising a sequence having at least 55% identity to SEQ ID No. 10 or a variant thereof.
49. The method of any one of claims 46 to 48, wherein the engineered guide RNA comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of SEQ ID No. 722.
50. The method of any one of claims 46 to 48, wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOs 159, 165, 168, 174 or 184 or a sequence having at least 80% identity to a targeting sequence of any one of SEQ ID NOs 159, 165, 168, 174 or 184.
51. The method of any one of claims 46 to 48, wherein the engineered guide RNA comprises the nucleotide sequence of any one of the guide RNAs of table 7B.
52. A method of disrupting a TRBC1 locus in a cell, the method comprising introducing into the cell:
(a) Class 2, type II Cas endonuclease; and
(b) An engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the TRBC1 locus,
wherein the engineered guide RNA is configured to hybridize to or comprise: a targeting sequence having at least 80% identity to SEQ ID NO. 252-292; or (b)
Wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOS: 211-251.
53. The method of claim 52, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease according to any one of claims 1 to 9 or 18 to 22.
54. The method of claim 52 or 53, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease comprising a sequence having at least 55% identity to SEQ ID No. 10 or a variant thereof.
55. The method of any one of claims 52 to 54, wherein the engineered guide RNA comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of SEQ ID No. 722.
56. The method of any one of claims 52 to 54, wherein the engineered guide RNA is a targeting sequence comprising a sequence having at least 80% identity to any one of SEQ ID NOs 211, 212, 215, 241 or 242 or comprising a targeting sequence having at least 80% identity to any one of SEQ ID NOs 211, 212, 215, 241 or 242.
57. The method of any one of claims 52 to 54, wherein the engineered guide RNA comprises the nucleotide sequence of any one of the guide RNAs of table 7C.
58. A method of disrupting a TRBC2 locus in a cell, the method comprising introducing into the cell:
(a) Class 2, type II Cas endonuclease; and
(b) An engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the TRBC2 locus,
wherein the engineered guide RNA is configured to hybridize to or comprise: a targeting sequence having at least 80% identity to SEQ ID NO 338-382; or (b)
Wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOS.293-337.
59. The method of claim 58, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease according to any one of claims 1 to 9 or 18 to 22.
60. The method of claim 58 or 59, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease comprising a sequence having at least 55% identity to SEQ ID No. 10 or a variant thereof.
61. The method of any one of claims 58 to 60, wherein the engineered guide RNA comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of SEQ ID No. 722.
62. The method of any one of claims 58 to 61, wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOs 296, 306 or 332 or comprises a targeting sequence having at least 80% identity to a targeting sequence of any one of SEQ ID NOs 296, 306 or 332.
63. The method of any one of claims 58 to 61, wherein the engineered guide RNA comprises the nucleotide sequence of any one of the guide RNAs of table 7C.
64. A method of disrupting an ANGPTL3 locus in a cell, the method comprising introducing into the cell:
(a) Class 2, type II Cas endonuclease; and
(b) An engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the ANGPTL3 locus,
wherein the engineered guide RNA is configured to hybridize to or comprise: a targeting sequence having at least 80% identity to SEQ ID NO 478-572; or (b)
Wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOS: 383-477.
65. The method of claim 64, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease according to any one of claims 1 to 9 or 18 to 22.
66. The method of claim 64 or 65, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease having at least 55% identity to SEQ ID No. 10 or a variant thereof.
67. The method of any one of claims 64 to 66, wherein the engineered guide RNA comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of SEQ ID No. 722.
68. The method of any one of claims 64 to 66, wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOs 419, 425, 431, 439, 447, 453, 461, 467, 471 or 473 or a sequence having at least 80% identity to any one of SEQ ID NOs 419, 425, 431, 439, 447, 453, 461, 467, 471 or 473.
69. The method of any one of claims 64 to 66, wherein the engineered guide RNA comprises the nucleotide sequence of any one of the guide RNAs of table 7D.
70. A method of disrupting a PCSK9 locus in a cell, the method comprising introducing into the cell:
(a) Class 2, type II Cas endonuclease; and
(b) An engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the PCSK9 locus,
wherein the engineered guide RNA is configured to hybridize to or comprise: a targeting sequence having at least 80% identity to SEQ ID NO 588-602; or (b)
Wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOs 573-587.
71. The method of claim 70, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease according to any one of claims 1 to 9 or 18 to 22.
72. The method of claim 70 or 71, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease comprising a sequence having at least 55% identity to SEQ ID No. 10 or a variant thereof.
73. The method of any one of claims 70-72, wherein the engineered guide RNA comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of SEQ ID No. 722.
74. The method of any one of claims 70-73, wherein the engineering guide comprises a sequence having at least 80% identity to any one of SEQ ID NOs 574, 578, 581, or 585.
75. The method of any one of claims 70 to 73, wherein the engineered guide RNA comprises the nucleotide sequence of any one of the guide RNAs of table 7E.
76. A method of disrupting an albumin locus in a cell, the method comprising introducing into the cell:
(a) Class 2, type II Cas endonuclease; and
(b) An engineered guide RNA, wherein the engineered guide RNA is configured to form a complex with the endonuclease, and the engineered guide RNA comprises a targeting sequence configured to hybridize to a region of the albumin locus,
wherein the engineered guide RNA comprises a sequence having at least 80% identity to any one of SEQ ID NOS: 67-86 or 646-695 or wherein the engineered guide RNA comprises a targeting sequence having at least 80% identity to a targeting sequence of any one of SEQ ID NOS: 67-86 or 646-695.
77. The method of claim 76, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease according to any one of claims 1 to 9 or 18 to 22.
78. The method of claim 76 or 77, wherein the class 2, type II Cas endonuclease comprises a fusion endonuclease having at least 55% identity to SEQ ID No. 10 or a variant thereof.
79. The method of any one of claims 76 to 78, wherein the engineered guide RNA comprises a sequence having at least 80% sequence identity to a non-degenerate nucleotide of SEQ ID No. 722.
80. The method of any one of claims 76 to 79, wherein the engineered guide RNA is complementary to or comprises: a sequence having at least 80% identity to any one of SEQ ID NOs 67, 68, 70, 71, 72, 76, 79, 80, 647, 648, 649, 653, 654, 655, 656, 673, 680, 681 or 682.
81. The method of any one of claims 76 to 79, wherein the engineered guide RNA comprises the nucleotide sequence of any one of the guide RNAs of table 6.
CN202280020679.3A 2021-01-22 2022-01-21 Novel engineered and chimeric nucleases Pending CN116964197A (en)

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US63/140,620 2021-01-22
US202163237484P 2021-08-26 2021-08-26
US63/237,484 2021-08-26
PCT/US2022/013396 WO2022159758A1 (en) 2021-01-22 2022-01-21 Novel engineered and chimeric nucleases

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