CN116284416A - Monoclonal antibody for resisting endogenous PINK1 protein and application thereof - Google Patents
Monoclonal antibody for resisting endogenous PINK1 protein and application thereof Download PDFInfo
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Abstract
The invention discloses a monoclonal antibody of an anti-endogenous PINK1 protein and application thereof, wherein the amino acid sequence of a heavy chain variable region of the monoclonal antibody is shown as SEQ ID No. 1-3 respectively; the amino acid sequences of the light chain variable regions are respectively shown as SEQ ID No. 4-5 and LVS. The monoclonal antibody can be used for identifying and detecting the PINK1 protein and is used for non-clinical diagnosis; can also be used for preparing reagents and kits for identifying and detecting the PINK1 protein. According to the invention, a PINK1 gene sequence fragment is constructed artificially, introduced into escherichia coli for prokaryotic expression, a PINK1 polypeptide fragment is collected and purified, a mouse is immunized by the PINK1 polypeptide fragment, a monoclonal antibody is prepared, and finally, a hybridoma cell strain 2E7B6 capable of specifically binding with a PINK1 protein is obtained through screening. The antibody can be specifically combined with PINK1 proteins of human and cynomolgus monkeys, and has good experimental performance.
Description
Technical Field
The invention belongs to the technical field of bioengineering, and particularly relates to a monoclonal antibody for resisting endogenous PINK1 protein and application thereof.
Background
PINK1 (PTEN-reduced kinase 1) is a serine/threonine protein kinase whose protein structure comprises an N-terminal mitochondrial localization sequence (mitochondrial targeting Sequence, MTS) linked to a transmembrane sequence (Transmembrane segment, TMS) and a serine/threonine kinase functional domain. It has been found that mutations in PINK1 at certain sites are associated with early onset parkinson's disease.
The metabolic conditions of PINK1 in vivo include two different modes, physiological and stress. Normally, full-length PINK1 is directed to the mitochondria by a mitochondrial localization sequence (MTS) and anchored to the inner mitochondrial membrane, mitochondrial processing peptidases (mitochondrial processing peptidase, MPP) in the mitochondrial matrix cleave off the localization sequence, and then presenilin-related diamond proteins (presenilin associated rhomboid like protein, PARL) cleave the transmembrane region at amino acid position 104, freeing the PINK1 kinase active region from the mitochondrial surface, free from the cytoplasm, and then degraded by the N-terminal regulated pathway.
When mitochondria are damaged or stimulated by the outside world, the mitochondrial membrane depolarizes, so that the PINK1 is positioned in disorder, only the outer membrane is positioned, the inner membrane cannot be accessed, and the MPP and the PARL cannot be excised at corresponding sites, so that the PINK1 cannot be dissociated and degraded. At this time, the abnormally located full-length PINK1 protein recruits E3Ubiquitin ligase (E3 Ubiquitin ligase) Parkin protein to the outer mitochondrial membrane, phosphorylates at the Parkin S65 site to activate Parkin, and at the same time, can activate Parkin through phosphorylating the Ubiquitin (Ubiquitin) molecule S65 site and then through Ubiquitin S65. Activated Parkin acts as an amplifier, triggering downstream PINK1/Parkin dependent autophagy pathways, clearing damaged mitochondria.
Knowledge of the structure and function of Pink1 is continually refreshed, but there are still many problems that need to be further confirmed. Because of the lack of specific and sensitive PINK1 antibodies, a great deal of research on the PINK1 antibodies is remained in vitro for over-expression or expressed in a stress state through chemical drug stimulation, and the research on the structure and the function of endogenous PINK1 proteins is not deep.
At present, commercial PINK1 antibodies are mostly polyclonal antibodies after knockout verification, and compared with monoclonal antibodies, the polyclonal antibodies have some limitations in use, for example, the differences among the batches of the polyclonal antibodies are larger; the non-specific impurity bands are more in the immunoblotting experiment, the background is deeper in the immunostaining experiment, and the like.
Disclosure of Invention
The invention aims to prepare the monoclonal antibody which has stronger specificity, higher recognition efficiency and simpler and more convenient acquisition method and can recognize endogenous human and monkey PINK1 proteins, and the monoclonal antibody is used for PINK1 protein detection for non-clinical diagnosis purposes.
The aim of the invention is achieved by the following technical scheme:
the heavy chain variable regions VHCDR1, VHCDR2 and VHCDR3 of the anti-endogenous PINK1 protein monoclonal antibody are respectively shown in SEQ ID No. 1-3; the amino acid sequences of the light chain variable region VLCDR1 and VLCDR3 are respectively shown in SEQ ID No. 4-5, and the amino acid sequence of the light chain variable region VLCDR2 is LVS;
the gene sequences encoding the heavy chain variable region and the light chain variable region amino acid sequences of the anti-endogenous PINK1 protein monoclonal antibody are also within the protection scope of the invention;
further, the gene sequences ntCDR1, ntCDR2, ntCDR3 of SEQ ID No. 6-8 are used to encode the amino acid sequences of the heavy chain variable regions VHCDR1, VHCDR2, VHCDR3, respectively; SEQ ID Nos. 9 to 10 gene sequences ntCDR1 and ntCDR3 are used for encoding the amino acid sequences of the light chain variable regions VLCDR1 and VLCDR3 respectively, and the gene sequence ctggtgtgtct (ntCDR 2) is used for encoding the amino acid sequence of the light chain variable region VLCDR 2;
the anti-endogenous PINK1 protein monoclonal antibody is a murine monoclonal antibody.
The anti-endogenous PINK1 protein monoclonal antibody is secreted by a monoclonal cell strain 2E7B 6;
the monoclonal cell strain 2E7B6 is obtained by fusing immune mouse spleen cells and mouse myeloma cells.
The anti-endogenous PINK1 protein monoclonal antibody can also be any one of the following antibodies:
(a) A single chain antibody obtained by linking any heavy chain variable region amino acid and any light chain variable region amino acid;
(b) A fusion antibody comprising the single chain antibody of (a);
(c) An intact antibody comprising any heavy chain variable region amino acid and any light chain variable region amino acid;
(d) Monoclonal antibodies produced by monoclonal cell line 2E7B6.
Biological materials related to the monoclonal antibodies of the invention are also within the scope of the invention, which are any of the following:
(1) An expression cassette comprising a gene sequence encoding the heavy chain variable region and the light chain variable region amino acid sequences of the anti-endogenous PINK1 protein monoclonal antibody;
(2) A recombinant vector containing gene sequences encoding the heavy chain variable region and the light chain variable region amino acid sequences of the anti-endogenous PINK1 protein monoclonal antibody;
(3) A recombinant vector comprising the expression cassette of (1);
(4) A transgenic animal cell line comprising a gene sequence encoding the heavy chain variable region and the light chain variable region amino acid sequences of the anti-endogenous PINK1 protein monoclonal antibody;
(5) A microorganism comprising a gene sequence encoding the amino acid sequences of the heavy chain variable region and the light chain variable region of the anti-endogenous PINK1 protein monoclonal antibody.
The anti-endogenous PINK1 protein monoclonal antibody can be used for identifying and detecting PINK1 proteins and is used for non-clinical diagnosis; preferably for the identification and detection of human and non-human primate PINK1 proteins;
the anti-endogenous PINK1 protein monoclonal antibody can be used for Western immunoblotting detection (WB), immunohistochemical staining (IHC) and immunofluorescence chemical staining (IF) of PINK1 proteins;
the non-human primate includes cynomolgus monkey, macaque, etc.
The anti-endogenous PINK1 protein monoclonal antibody can be used for preparing a reagent and a kit for identifying and detecting the PINK1 protein.
Compared with the prior art, the invention has the following advantages and effects:
according to the invention, a PINK1 gene sequence fragment is constructed artificially, introduced into escherichia coli for prokaryotic expression, a PINK1 polypeptide fragment is collected and purified, a mouse is immunized by the PINK1 polypeptide fragment, a monoclonal antibody is prepared, and finally, a hybridoma cell strain 2E7B6 capable of specifically binding with a PINK1 protein is obtained through screening. The antibody can be specifically combined with PINK1 proteins of human and cynomolgus monkeys, and has better experimental performance in experiments such as western immunoblotting (WB), immunohistochemical staining (IHC), immunofluorescence chemical staining (IF) and the like.
Drawings
FIG. 1 is a graph showing the results of in vitro expression of the PINK1 protein polypeptide (175 aa-250 aa); wherein lane M 1 Is a marker; lane 1 is a human PINK1 protein polypeptide (175 aa-250 aa); lane 2 is BSA.
FIG. 2 is a culture diagram of hybridoma monoclonal cell selection 2E7B6.
FIG. 3 is a SDS-PAGE of purified antibodies; wherein lane M is marker; lane 1 is antibody secreted by cell line 2E7B6.
FIG. 4 is a graph showing the Western Blotting (WB) results of the 2E7B6 antibody.
FIG. 5 is a graph of the results of immunohistochemical staining (IHC) of the 2E7B6 antibody.
FIG. 6 is a graph showing the results of immunofluorescent staining (IF) with the 2E7B6 antibody.
Detailed Description
The present invention will be described in further detail with reference to examples and drawings, but embodiments of the present invention are not limited thereto.
EXAMPLE 1 prokaryotic expression vector construction
1.1 in vitro expression and purification of human PINK1 protein polypeptide (175 aa-250 aa). Total RNA was extracted from human somatic cells (skin fibroblasts), reverse transcribed into cDNA, and the gene sequence corresponding to amino acids 175 to 250 was sequenced by specific primers, primers were designed to amplify PINK1 (175 aa-250 aa), primers were as follows: upstream primer atgcctacattgccccagaac, downstream primer agccaaggccactcggctcgc.
1.2 upstream primer added BamHI cleavage site and downstream primer added HindIII cleavage site, PCR amplification was performed and gel recovery was performed. The gel recovered product and pET30a vector were digested simultaneously with BamHI and HindIII and ligated, and transferred into Ecoli DH5a competence for expression vector expansion. Specifically, ecoli DH5a competent cells were taken out from a-80℃refrigerator, thawed on ice, added with 2ul of recombinant plasmid to 100ul of competent cells, incubated on ice for 30 minutes, then incubated on ice for 45 seconds in a 42℃water bath, then incubated on ice for 2 minutes, then added with 1ml of antibiotic-free LB medium, shaken on a 37℃shaker for 1 hour, finally plated on a kanamycin-containing plate, and incubated overnight in a 37℃incubator.
1.3 colony sequencing, selecting the receptor bacteria successfully introduced with the recombinant plasmid, performing amplification culture and extracting the plasmid.
EXAMPLE 2 PINK1 protein polypeptide induced expression, purification and characterization
2.1 transferring the amplified plasmid of interest into BL21 prokaryotic expression vector system. For specific procedures, refer to example 1, step 1.2.
2.2 picking up monoclonal colonies, shaking (4 ml) for 4 hours at 37 ℃ with a shaking table of 250rpm, transferring to a large shaking table (500 ml), adding 1mM inducer IPTG (isopropyl thiogalactoside) when the OD value reaches 0.6-0.8, and culturing overnight.
2.3 collecting bacterial liquid, cracking and extracting protein, purifying and enriching the protein through nickel column affinity, and performing SDS-PAGE identification, wherein the PINK1 protein is correctly expressed as shown in figure 1.
EXAMPLE 3 monoclonal antibody preparation
3.1 immunization of animals.
5 BALB/c mice were selected, and PINK1 protein was mixed with Freund's adjuvant and immunized by subcutaneous injection at 50 ug/day, and the immunization was boosted once for 2-3 weeks. Blood collection detection, namely determining the titer of the antiserum against the PINK1 by an indirect ELISA method.
3.2 cell electrofusion
3.2.1 preparation of myeloma cells: one week prior to fusion, SP2/0 cells were grown expanded in DMEM medium containing 10% FBS. By the time of fusion, the cells grew to approximately 6T 25 cell flasks, and SP2/0 cells were collected on the day of fusion into 50mL centrifuge tubes, 1500rpm, and centrifuged for 5min. The supernatant was discarded, then 20mL of DMEM basal medium was added, the cells were blown off and counted.
3.2.2 preparation of mouse spleen cells: mice with serum ELISA titers greater than 8000 post-four-immunization were selected (i.e., ELISA remained positive after 8000-fold serum dilution). Mice to be fused were euthanized on the day of fusion by cervical dislocation. Soaking in 75% alcohol for 5min. Spleens were aseptically removed and placed in petri dishes with 10mL DMEM basal medium. The screen was placed in another plate, the spleen was transferred to the screen and the spleen was ground with the syringe core. DMEM was added to the screen and the screen was rinsed to allow more spleen cells to collect in the dish. The cells were transferred to a 50mL centrifuge tube, and the spleen cells were washed once with serum-free DMEM and centrifuged at 1500rpm for 5min. Spleen cell counts were collected.
3.2.3 cell fusion: myeloma cells and spleen cells are mixed, preferably such that the ratio of myeloma cells to spleen cells is 1:2. The cells were placed in 50ml centrifuge tubes, diluted with DMEM basal medium, and centrifuged at 1500rpm for 5min. The supernatant was discarded. Shaking the centrifuge tube to homogenize the cellsThe cells were washed once with the electrofusion solution and then centrifuged at 1500rpm for 5min. The supernatant was discarded. Dilution of cells to 2X 10 with electrofusion 7 2ml of cell suspension is added into the fusion pool for electrofusion on-machine experiment, and the fusion pool is kept stand for 10min after electric shock. HAT DMEM medium was then added. The fused cells were plated into 96-well plates at 100ul per well. The cell culture plate is then placed in CO 2 Culturing in an incubator. The hybridoma cell cloning efficiency is over 50 percent, a small amount of cell fragments are contained, and the cell growth state is good after 6 days of fusion. Screening assays were started 10 days after fusion.
3.2.4 fusion cell screening: on the day before detection, 1ug/ml antigen was coated with PBS on ELISA plates overnight. The ELISA detection is carried out by sucking 100ul of cell supernatant per well in the next day, and positive wells are judged according to ELISA results (positive wells are judged when the OD value of a sample well/the OD value of a negative well is more than or equal to 2.1). And (3) picking the positive holes detected by the whole plate by using a single-channel pipette, and performing a second confirmation detection to further confirm the positive holes. The positive well cells after the determination were subcloned.
3.2.5 cell subcloning: blowing cells in the positive holes, counting, adding N/4mL of DMEM culture medium (N is a cell counting result) into a centrifuge tube, taking 100ul of cell suspension into the centrifuge tube, keeping 1mL after blowing evenly, adding DMEM to 4mL, blowing evenly, and keeping 100ul (about 2 drops) at the bottom of the tube. Adding DMEM to 5ml into a centrifuge tube, uniformly mixing, dropwise adding into the first three rows of a 96-well plate, keeping about 1.8-2ml of DMEM to 5ml of DMEM at the bottom of each drip tube, uniformly blowing, dropwise adding into D, E, F three rows of the 96-well plate, keeping about 1.5-1.8ml of DMEM to about 2.8-3ml of DMEM at the bottom of each drip tube, uniformly blowing, dropwise adding into G, H rows of the 96-well plate, dropwise adding into each drip, observing under a microscope after 7-10 days, detecting a hole with clone growth, marking a monoclonal hole, picking positive monoclonal cells as far as possible for subcloning again, and picking out the monoclonal holes for enlarging culture strains after 100% of positivity is detected.
3.2.6 subclone screening: the specific steps are the same as 3.2.4.
3.2.7 antibody expression: the monoclonal cell line 2E7B6 (the culture diagram is shown in FIG. 2) is selected for preparing the ascites antibody of the mice. The 2E7B6 monoclonal cell strain was inoculated into the abdominal cavity of a mouse, and ascites was collected after 7 to 10 days for antibody purification. Optionally: in this step, the 2E7B6 monoclonal cell line may be cultured in vitro, and the culture supernatant may be collected.
3.2.8 antibody purification: loading Protein A+G agarose gel medium into an affinity purification chromatographic column, slowly loading 2E7B6 cell supernatant, eluting with alkaline eluting buffer solution after antibody combination to obtain the required purified antibody, immediately dialyzing in PBS at 4deg.C overnight, and measuring purity and concentration every other day (as shown in figure 3, 0.52 mg/mL).
3.2.9 antibody identification: the 2E7B6 monoclonal cell strain is sent to Nanjde Tex bioengineering Co.Ltd, the light and heavy chain variable regions and the non-variable regions are respectively subjected to gene sequencing, and amino acid backtracking is carried out through a universal codon table to determine the amino acid sequences of the light and heavy chain variable regions and the non-variable regions.
The amino acid sequences of the heavy chain variable regions VHCDR1, VHCDR2 and VHCDR3 of the monoclonal antibody obtained by the 2E7B6 monoclonal cell strain are respectively shown in SEQ ID No. 1-3; the amino acid sequences of the VLCDR1 and VLCDR3 of the obtained monoclonal antibody light chain variable region are respectively shown in SEQ ID No. 4-5, and the amino acid sequence of the VLCDR2 of the light chain variable region is LVS;
the gene sequences ntCDR1, ntCDR2 and ntCDR3 of SEQ ID No. 6-8 are respectively used for encoding amino acid sequences of heavy chain variable regions VHCDR1, VHCDR2 and VHCDR 3; SEQ ID Nos. 9 to 10 gene sequences ntCDR1, ntCDR3 are used for encoding the amino acid sequences of the light chain variable regions VLCDR1, VLCDR3, respectively, and the gene sequence ctggtgtgtct (ntCDR 2) is used for encoding the amino acid sequence of the light chain variable region VLCDR 2.
EXAMPLE 4 Western blot application of monoclonal antibodies
4.1 taking normal control monkey and PINK1 knock-down monkey models of cerebral cortex tissue (see references Yang W, liu Y, tu Z, et al CRISPR/Cas9-mediated PINK1 deletion leads to neurodegeneration in rhesus monkeys [ J ]. Cell research,2019,29 (4): 334-336. Animal model previously constructed in the subject group), SDS-PAGE was performed after total protein extraction under conditions of 120V for 90 minutes.
4.2 transfer proteins to nitrocellulose membrane by electrotransfer after electrophoresis was completed at 100v for 60 min.
4.3 after the film transfer, taking out the nitrocellulose film, and sealing with 5% skim milk powder sealing liquid for 1 hour.
4.4 monoclonal antibodies were added and incubated overnight at 4℃on a shaker.
4.5 wash three times with TBST solution for 10 minutes each.
4.6 adding horseradish peroxidase (HRP) labeled rabbit anti-mouse secondary antibody, shaking table at room temperature for 1 hr.
4.7 wash three times with TBST solution for 10 minutes each.
4.8, evenly incubating the developing solution and developing by an automatic developing instrument.
The experimental result is shown in fig. 4, the comparison effect of the antibody is obviously improved compared with that of similar polyclonal antibodies of the N company, and the antibody has more specific recognition effect and higher recognition efficiency on the target strip under the same antibody concentration.
EXAMPLE 5 immunohistochemical use of monoclonal antibodies
5.1 incubation of monkey brain cortex tissue brain sections with 3% hydrogen peroxide for 10min, followed by PBS infiltration and washing off residual hydrogen peroxide
5.2 adding enough citric acid antigen retrieval liquid into the staining jar to fully infiltrate the brain slice, and placing the staining jar into a boiling water bath at 100 ℃ to carry out antigen retrieval.
5.3 after natural cooling, rinsing with PBS for 3 times, adding donkey serum blocking solution (containing 0.3% Triton-X100) for blocking and membrane permeation for 1 hr.
5.4 PINK1 antibody was added and incubated overnight at 4 ℃.
5.5 rinsing 3 times with PBS, dripping rabbit anti-mouse HRP secondary antibody, and incubating for 1 hour at room temperature.
5.6 rinsing with PBS for 3 times, dripping DAB color development liquid, and stopping color development when the brown yellow changes and the color depth is proper.
5.7 sequentially placing the slices into 80% ethanol, 95% ethanol, 100 % ethanol 1, 100% ethanol 2, xylene 1 and xylene 2, and dehydrating and drying.
5.8 neutral resin seals and observations under microscope.
The experimental results are shown in fig. 5, wherein the dark brown color is colored cells, and it can be seen that the neural cells can be well identified in the gray matter area, and the glial cells can be well identified in the white matter area.
EXAMPLE 6 immunofluorescence application of monoclonal antibodies
6.1 refer to example 5, steps 5.2-5.4;
6.2 rinsing 3 times with PBS, dripping rabbit anti-mouse fluorescent secondary antibody, and incubating for 1 hour at room temperature.
6.3 rinsing 3 times with PBS, and nuclear counterstaining with DAPI was performed.
6.4 washing off DAPI, anti-quench caplets
6.5 microscopic observations.
The experimental results are shown in FIG. 6, which shows that cells can be well stained and that PINK1 exhibits cytoplasmic localization.
In general, the invention obtains the monoclonal strain 2E7B6 by immunizing mice with specific PINK1 antigen fragments and carrying out monoclonal screening, and the monoclonal strain has better experimental performance in experiments such as western immunoblotting (WB), immunohistochemical staining (IHC), immunofluorescence chemical staining (IF) and the like, thereby laying a good foundation for the subsequent study of protein functions and pathogenic mechanisms of PINK1 gene related diseases.
The above examples are preferred embodiments of the present invention, but the embodiments of the present invention are not limited to the above examples, and any other changes, modifications, substitutions, combinations, and simplifications that do not depart from the spirit and principle of the present invention should be made in the equivalent manner, and the embodiments are included in the protection scope of the present invention.
Claims (10)
1. An anti-endogenous PINK1 protein monoclonal antibody, which is characterized in that: the amino acid sequences of the heavy chain variable regions VHCDR1, VHCDR2 and VHCDR3 are respectively shown in SEQ ID No. 1-3; the amino acid sequences of the light chain variable region VLCDR1 and VLCDR3 are respectively shown in SEQ ID No. 4-5, and the amino acid sequence of the light chain variable region VLCDR2 is LVS.
2. A gene sequence encoding the heavy chain variable region and light chain variable region amino acid sequences of the anti-endogenous PINK1 protein monoclonal antibody of claim 1.
3. The gene sequence according to claim 2, characterized in that: the gene sequences ntCDR1, ntCDR2 and ntCDR3 of SEQ ID No. 6-8 are respectively used for encoding amino acid sequences of heavy chain variable regions VHCDR1, VHCDR2 and VHCDR 3; SEQ ID Nos. 9 to 10 gene sequences ntCDR1, ntCDR3 are used for encoding the amino acid sequences of the light chain variable regions VLCDR1, VLCDR3, respectively, and the gene sequence ctggtgtgtct (ntCDR 2) is used for encoding the amino acid sequence of the light chain variable region VLCDR 2.
4. The anti-endogenous PINK1 protein monoclonal antibody according to claim 1, characterized in that it is a murine monoclonal antibody.
5. The anti-endogenous PINK1 protein monoclonal antibody according to claim 1, which is secreted by monoclonal cell line 2E7B6.
6. The anti-endogenous PINK1 protein monoclonal antibody according to claim 5, characterized in that: the monoclonal cell strain 2E7B6 is obtained by fusing immune mouse spleen cells and mouse myeloma cells.
7. The anti-endogenous PINK1 protein monoclonal antibody according to claim 1, characterized in that it is also any one of the following antibodies:
(a) A single chain antibody obtained by ligating any one of the heavy chain variable region amino acids of claim 1 with any one of the light chain variable region amino acids;
(b) A fusion antibody comprising the single chain antibody of (a);
(c) An intact antibody comprising any of the heavy chain variable region amino acids and any of the light chain variable region amino acids of claim 1;
(d) Monoclonal antibodies produced by monoclonal cell line 2E7B6.
8. A biological material associated with the monoclonal antibody according to any one of claims 1-7, characterized by any one of the following:
(1) An expression cassette comprising the gene sequence of claim 2 or 3;
(2) A recombinant vector comprising the gene sequence of claim 2 or 3;
(3) A recombinant vector comprising the expression cassette of (1);
(4) A transgenic animal cell line comprising the gene sequence of claim 2 or 3;
(5) A microorganism comprising the gene sequence of claim 2 or 3.
9. Use of an anti-endogenous PINK1 protein monoclonal antibody according to any of claims 1-8 for the identification and detection of PINK1 proteins for non-clinical diagnostic purposes.
10. Use of the anti-endogenous PINK1 protein monoclonal antibody according to any one of claims 1-8 in the preparation of reagents and kits for identifying and detecting PINK1 protein.
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