CN115927228A - Mutant and construction method and application thereof - Google Patents

Mutant and construction method and application thereof Download PDF

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CN115927228A
CN115927228A CN202210736807.6A CN202210736807A CN115927228A CN 115927228 A CN115927228 A CN 115927228A CN 202210736807 A CN202210736807 A CN 202210736807A CN 115927228 A CN115927228 A CN 115927228A
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张丽星
陆泽林
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Suzhou Institute of Biomedical Engineering and Technology of CAS
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Abstract

The invention provides a mutant, the amino acid sequence of which is SEQ ID NO.1, and the following site mutations occur: A417V; a417V and T122V; a417V and D229N; a417V and G438D; a417V, T122V and D229N; a417V, T122V, and G438D; a417V, D229N, and G438D; T122V, D229N, a417V, and G438D. Compared with the wild L-lysine oxidase, the mutant of the L-lysine oxidase provided by the invention has better heat stability. The L-lysine oxidase mutant obtained by the construction method provided by the invention has better thermal stability, still shows excellent catalytic activity when L-lysine is oxidized at higher temperature, and has higher application potential in the fields of L-lysine biosensor detection, biochemical engineering and the like.

Description

Mutant and construction method and application thereof
The application is a divisional application with the application number of 202011622700.6 and the name of 'a mutant and a construction method and application thereof' which is submitted at 12, month and 30 in 2020.
Technical Field
The invention relates to the technical field of biology, in particular to a mutant and a construction method and application thereof.
Background
L-lysine, also known as the first limiting amino acid, not only regulates the metabolic balance in the body, but also has important effects on improving the absorption of cereal proteins in the body, improving the dietary nutrition of human beings and promoting the growth and development. Therefore, the L-lysine content is an important index for detection. The traditional physical and chemical detection method has long detection time, high cost and complicated operation process, and the biological catalysis is an efficient and simple method. L-amino acid oxidase is an important oxidoreductase participating in the oxidative metabolism of amino acids in organisms, is mostly flavoprotein, and can catalyze L-amino acid oxidative deamination by using oxygen molecules as electron receptors to generate corresponding keto acid, ammonia (NH 3) and hydrogen peroxide (H2O 2). Most of the L-amino acid oxidases found at present have a broad substrate spectrum, and are often interfered by other existing amino acids when catalyzing and oxidizing a certain amino acid. Some L-amino acid oxidases are capable of specifically recognizing a specific amino acid without being interfered by other kinds of amino acids. The L-lysine oxidase can perform specific catalytic reaction with L-lysine, is an important catalyst for life activities, has mild catalytic reaction conditions, single product, low energy consumption and easy separation of the product, and is widely applied to the fields of food, chemical industry, environmental protection, energy and medicine. However, the stability and catalytic activity of the natural L-lysine oxidase are greatly reduced under severe conditions of high temperature, extreme pH value, organic solvent, unnatural substrate, product inhibition and the like, and the application requirement in industrial production is difficult to meet.
The protein engineering is based on the structural rule of protein molecules and the relation of biological functions thereof, and the existing protein is modified or made into a new protein by means of chemical, physical and molecular biology through genetic modification or genetic synthesis so as to meet the requirements of human on production and life. Rational design is the most common method in protein engineering, and utilizes computer-aided molecular model in combination with site-directed mutagenesis to achieve optimization of protein functions, such as improvement of catalytic activity, thermal stability, acid and alkali resistance, etc. To effectively optimize the thermal stability of proteins, markus Wys et al proposed the Consenssus Concept in 2001. Different from the conventional rational protein design method based on the precise structure-function relationship of protein, the Consensus Concept is based on the amino acid sequence information of homologous proteins, and the information capable of improving the thermal stability of the enzyme is analyzed from the evolutionary perspective. The invention takes the Consensus theory as a guiding idea, integrates and analyzes the L-amino acid oxidase family sequence, and combines the assistance of bioinformatics to obtain the novel L-lysine oxidase mutant with high stability. Related studies are not reported at present.
Disclosure of Invention
Therefore, the invention aims to solve the problem of insufficient thermal stability of the existing L-lysine oxidase mutant, and provides a mutant with thermal stability, a primer pair for amplifying a nucleic acid sequence at a mutation site of the L-lysine oxidase mutant, and a soluble protein, an enzyme preparation, a recombinant engineering cell and a recombinant vector containing the mutant, which are used for catalyzing and oxidizing L-lysine.
According to a first aspect of the present disclosure, there is provided a mutant having an amino acid sequence in which mutations occur at the following sites in SEQ ID No. 1: A417V; a417V and T122V; a417V and D229N; a417V and G438D; a417V, T122V and D229N; a417V, T122V, and G438D; a417V, D229N, and G438D; T122V, D229N, a417V and G438D.
In some possible implementations, the amino acid sequences corresponding to the mutants are SEQ ID NO.4, SEQ ID NO.7, SEQ ID NO.9, SEQ ID NO.11, SEQ ID NO.12, SEQ ID NO.14, SEQ ID NO.15, SEQ ID NO.16, respectively.
According to a second aspect of the present disclosure, there is provided a gene sequence encoding the aforementioned mutant, the gene sequence being configured as any one of SEQ ID No.19, SEQ ID No.22, SEQ ID No.24, SEQ ID No.26, SEQ ID No.27, SEQ ID No.29, SEQ ID No.30, SEQ ID No.31, wherein:
the nucleic acid sequence of the mutant with the mutation site of A417V is SEQ ID NO.19;
the nucleic acid sequence of the mutant with the mutation sites of T122V and A417V is SEQ ID NO.22;
the nucleic acid sequence of the mutant with the coding mutation sites of D229N and A417V is SEQ ID NO.24;
the nucleic acid sequence of the mutant with the mutation sites of A417V and G438D is SEQ ID NO.26;
the nucleic acid sequence of the L-lysine oxidase mutant of the mutant with the mutation sites of T122V, D229N and A417V is SEQ ID NO.27;
the nucleic acid sequence of the mutant with the mutation sites of D229N, A417V and G438D is SEQ ID NO.29;
the nucleic acid sequence of the mutant with mutation sites of T122V, A417V and G438D is SEQ ID NO.30;
the nucleic acid sequence encoding the mutant with mutation sites T122V, D229N, A417V and G438D is SEQ ID NO.31.
Further, the nucleic acid sequences of the amplification primer pair of the mutation site T122V are SEQ ID NO.32 and SEQ ID NO.33.
Further, the nucleic acid sequences of the amplification primer pair of the mutation site D229N are SEQ ID NO.34 and SEQ ID NO.35.
Further, the nucleic acid sequences of the amplification primer pair of the mutation site A417V are SEQ ID NO.36 and SEQ ID NO.37.
Further, the nucleic acid sequences of the amplification primer pair of the mutation site G438D are SEQ ID NO.38 and SEQ ID NO.39.
According to a third aspect of the present disclosure, there is provided a soluble protein configured to include a mutant as described above.
According to a fourth aspect of the present disclosure, there is provided an immobilized enzyme configured to comprise a mutant as described above.
According to a fifth aspect of the present disclosure, there is provided a recombinant cell configured to include a coding sequence of a mutant as described above.
According to a sixth aspect of the present disclosure, there is provided a recombinant vector configured to include a coding sequence of a mutant as described above.
According to a seventh aspect of the present disclosure, there is provided the use of the aforementioned mutant, soluble protein, enzyme preparation, recombinant engineered cell or recombinant vector for the catalytic oxidation of L-lysine.
The L-lysyl oxidase LysOX mutant with improved thermal stability provided by the invention comprises a single-point mutant and a combined mutant, and compared with a wild type L-lysyl oxidase LysOX, the single-point mutant and the combined mutant have longer half-lives at 45 ℃; in particular, the combination mutant showed a synergistic effect of thermal stability of the single-point mutant, with a half-life of about 3 times that of the wild-type L-lysOX. Based on the above, the L-lysine oxidase LysOX mutant provided by the invention has better thermal stability, and is suitable for catalyzing and oxidizing L-lysine at higher temperature.
The construction method of the L-lysine oxidase LysOX mutant with improved thermal stability is different from the rational design based on the precise structure-function relationship of protein, the construction method takes the Consensus Concept as a guide idea, analyzes information capable of improving the thermal stability of the enzyme from the aspect of evolution, performs integration analysis on L-amino acid oxidase family sequences, and combines the assistance of bioinformatics and crystallography methods to obtain the novel L-lysine oxidase LysOX mutant with high stability.
The L-lysine oxidase LysOX mutant with improved thermal stability provided by the invention has a better application prospect in the aspect of L-lysine detection.
Drawings
In order to more clearly illustrate the technical solutions of the embodiments of the present invention, the drawings that are required to be used in the embodiments will be briefly described below, it should be understood that the following drawings only illustrate some embodiments of the present invention and therefore should not be considered as limiting the scope, and for those skilled in the art, other related drawings can be obtained according to the drawings without inventive efforts.
Fig. 1 shows a schematic diagram of a simulated crystal structure of L-lys oxidase LysOX protein and a schematic diagram of distribution of mutation sites on the crystal structure according to an embodiment of the present disclosure.
Detailed Description
In order to make the objects, technical solutions and advantages of the embodiments of the present invention more apparent, the technical solutions of the embodiments of the present invention will be described clearly and completely with reference to the accompanying drawings of the embodiments of the present invention, and it is obvious that the described embodiments are some, but not all embodiments of the present invention. Thus, the following detailed description of the embodiments of the present invention, presented in the figures, is not intended to limit the scope of the invention, as claimed, but is merely representative of selected embodiments of the invention. All other embodiments, which can be obtained by a person skilled in the art without inventive efforts based on the embodiments of the present invention, are within the scope of protection of the present invention.
The present disclosure provides an L-lys oxidase LysOX mutant with improved thermal stability, wherein the L-lys oxidase LysOX is a wild-type L-lys oxidase LysOX derived from Trichoderma viride, and is named as LysOX protein, and the amino acid sequence of the LysOX protein is SEQ ID No.1.
In some embodiments, the amino acid sequence of the mutant is (a) or (b) as follows:
(a) At least one amino acid of the amino acid sequence SEQ ID NO.1 of the natural L-lysine oxidase is substituted, deleted or added, and the amino acid sequence of the mutant has more than 90 percent of homology with the amino acid sequence SEQ ID NO. 1; or
(b) At least one amino acid of the amino acid sequence SEQ ID NO.1 of the natural L-lysine oxidase is substituted, deleted or added, and the amino acid sequence of the mutant has the same function with the amino acid sequence SEQ ID NO.1.
In some embodiments, the amino acid sequence of the mutant is any one of SEQ ID No.2 to 16. Specifically, a certain site is selected from an amino acid sequence shown in SEQ ID No.1 for single-point mutation to obtain 5L-lysine oxidase single-point mutants, wherein the mutation sites are as follows: S95A, T122V, D229N, A417V and G438D, and the 5L-lysine oxidase single-point mutants are subjected to property measurement to screen 4L-lysine oxidase mutants with improved thermal stability, wherein the mutation sites are as follows: T122V, D229N, A417V, G438D, the amino acid sequences of which are SEQ ID NO.2, SEQ ID NO.3, SEQ ID NO.4, SEQ ID NO.5 and,
selecting a plurality of mutation sites for combination in the amino acid sequence shown in SEQ ID NO. 1:
1) For example, 2 mutation sites are selected from the 4 mutation sites and combined to obtain T122V/D229N, T122V/A417V, T122V/G438D, D229N/A417V, D229N/G438D and A417V/G438D, the amino acid sequences of which are respectively SEQ ID NO.6, SEQ ID NO.7, SEQ ID NO.8, SEQ ID NO.9, SEQ ID NO.10 and SEQ ID NO.11.
2) If 3 mutation sites are selected from the 4 mutation sites for combination, 4L-lysine oxidase mutants with improved thermal stability are respectively obtained, and the combined mutation sites are as follows:
T122V/D229N/A417V,
T122V/D229N/G438D,
D229N/A417V/G438D,
T122V/A417V/G438D, and the amino acid sequences are SEQ ID NO.12, SEQ ID NO.13, SEQ ID NO.14 and SEQ ID NO.15 respectively.
3) For example, 4 mutation sites are selected from the 4 mutation sites and combined to obtain 1L-lysine oxidase mutant with improved thermal stability, and the combined mutation sites are as follows:
T122V/D229N/A417V/G438D, the amino acid sequence of which is SEQ ID NO.16.
The embodiments of the present disclosure provide a gene sequence encoding the aforementioned mutant, which corresponds to the amino acid sequences having different mutation sites as follows:
the nucleic acid sequence of the mutant with the coding mutation site of T122V is SEQ ID NO.17;
the nucleic acid sequence of the mutant with the coding mutation site of D229N is SEQ ID NO.18;
the nucleic acid sequence of the mutant with the mutation site of A417V is SEQ ID NO.19;
the nucleic acid sequence of the mutant with the coding mutation site of G438D is SEQ ID NO.20;
the nucleic acid sequence of the mutant with the mutation sites of T122V and D229N is SEQ ID NO.21;
the nucleic acid sequence of the mutant with the mutation sites of T122V and A417V is SEQ ID NO.22;
the nucleic acid sequence of the mutant with the mutation sites of T122V and G438D is SEQ ID NO.23;
the nucleic acid sequence of the mutant with the mutation sites of D229N and A417V is SEQ ID NO.24;
the nucleic acid sequence of the mutant with the mutation sites of D229N and G438D is SEQ ID NO.25;
the nucleic acid sequence of the mutant with the mutation sites of A417V and G438D is SEQ ID NO.26;
the nucleic acid sequence of the L-lysine oxidase mutant for coding the mutant with mutation sites of T122V, D229N and A417V is SEQ ID NO.27;
the nucleotide sequence of the L-lysine oxidase mutant of the mutant with the mutation sites of T122V, D229N and G438D is SEQ ID NO.28;
the nucleic acid sequence of the mutant with the mutation sites of D229N, A417V and G438D is SEQ ID NO.29;
the nucleic acid sequence of the mutant with mutation sites of T122V, A417V and G438D is SEQ ID NO.30;
the nucleic acid sequence encoding the mutant with mutation sites T122V, D229N, A417V and G438D is SEQ ID NO.31.
Further, the nucleic acid sequences of the amplification primer pair of the mutation site T122V are SEQ ID NO.32 and SEQ ID NO.33.
Further, the nucleic acid sequences of the amplification primer pair of the mutation site D229N are SEQ ID NO.34 and SEQ ID NO.35.
Further, the nucleic acid sequences of the amplification primer pair of the mutation site A417V are SEQ ID NO.36 and SEQ ID NO.37.
Further, the nucleic acid sequences of the amplification primer pair of the mutation site G438D are SEQ ID NO.38 and SEQ ID NO.39.
The embodiment of the present disclosure further provides a method for constructing the aforementioned mutant, which includes the following steps:
cloning of S1 wild type L-lysine oxidase LysOX gene
And (3) carrying out codon optimization on the wild L-lysine oxidase gene by taking escherichia coli as a host cell to obtain an optimized LysOX gene, wherein the expressed amino acid sequence of the optimized LysOX gene is SEQ ID NO.1.
Using SEQ ID NO.1 as a target gene, and adopting the following amplification primer pairs to amplify the target gene:
F:5’-CGCATATGatggacacgtagtactcgcagagtcag-3' (wherein the restriction enzyme NdeI recognition site is underlined);
R:5’-TCAGCTCTCGAGCTTTACCTGGTACTCCTTTGGTAG-3' (with the restriction enzyme XhoI recognition site underlined).
The amplification conditions were: amplification was carried out at 95 ℃ for 2min, followed by amplification at 56 ℃ for 20sec, at 72 ℃ for 90sec for 30 cycles, and finally at 72 ℃ for 10min.
After the reaction is finished, detecting the PCR amplification product by 1.5% agarose gel electrophoresis to obtain a 1.0kb band, wherein the length of the band accords with an expected result. The desired fragment was recovered and purified by the standard procedures of the kit, and the desired fragment and pET28a plasmid were digested simultaneously with restriction endonucleases XhoI and NdeI, and then ligated with T4 DNA ligase, and the resulting ligation product was transformed into E.coli BL21 (DE 3) competent cells, and the transformed cells were plated on LB plate containing 100. Mu.g/ml kanamycin to extract positive clone plasmid, and sequencing was performed, and as a result, it was revealed that the cloned L-lysine oxidase LysOX gene had the correct sequence and that pET28a plasmid had been correctly ligated thereto, and recombinant plasmid pET28a-LysOX was obtained.
Wherein, the PCR amplification enzyme is KOD high fidelity polymerase.
Expression and purification of S2 LysOX proteins
Inoculating the recombinant plasmid pET28a-LysOX in the glycerin pipe into a 4mL LB culture medium test tube containing 100 mu g/mL Kan according to the volume ratio of 1%, and culturing for 12h at 37 ℃ and 220 rpm; transferring 4mL of the bacterial liquid into a shake flask containing 1L LB culture medium of 100 mu g/mL Kan, culturing at 37 ℃ and 220rpm for 2.5h to make OD600 reach 0.6-0.8, adding 1mM IPTG inducer, and performing induction culture at 25 ℃ and 200rpm for 14h. And ultrasonically crushing the escherichia coli thallus suspension obtained after fermentation, and performing Ni-NTA affinity chromatography treatment to obtain the LysOX protein with the purity of more than 95%, wherein the amino acid sequence is SEQ ID NO.1.
Multiple sequence alignment and Consensus analysis of S3 LysOX homologous proteins
S301: entering a Pfam database homepage (http:// Pfam. Xfam. Org /), inputting an amino acid SEQUENCE of LysOX in a SEQUENCE SEARCH tool for searching, directly feeding back a comparison result of the amino acid SEQUENCE of the whole family of the protein by a server, displaying the abundance of various amino acids of each mutation site in a bar graph form, and automatically generating a consensus SEQUENCE of the protein family by the website;
s302: inputting an amino acid sequence shown by SEQ ID NO.2 into an NCBI protein database and a Pfam database, finding out all protein sequences with the consistency of more than 50 percent with an amino acid sequence (SEQ ID NO. 2) of the LysOX protein by using a Blast tool, deleting the repeated identical sequences in the protein sequences, arranging the rest amino acid sequences into a fasta format, inputting Clustalx1.83 software for multi-sequence comparison, and outputting comparison results in an aln, dnd and fasta format, wherein the dnd file is used for constructing an evolutionary tree file, and the aln and fasta files are sequence files with different forms;
uploading the fasta. File to Consensus Maker v2.0.0
(https://www.hiv.lanl.gov/content/sequence/CONSENSUS/consensus.html)
And after the server modifies the set parameters as required, the online software generates a consensus sequence which can be edited later.
S303: the amino acid sequence of the LysOX protein was compared against the family consensus sequence and the amino acid abundance map at each site.
S4: simulation of three-dimensional structure of LysOX protein and selection of mutation hot spots
S401: predicting the three-dimensional structure of the obtained LysOX protein (amino acid sequence SEQ ID NO. 1) by a swissmodel online tool;
s402: pyMOL is used for observing the crystal structure of the LysOX protein (amino acid sequence SEQ ID NO. 1), the mutant sites and the mutant forms to be selected are reviewed according to structural information, and the mutant sites which are most likely to improve the thermal stability of the LysOX protein are selected under the following conditions:
(1) The standard for judging a certain locus as a candidate locus is as follows:
(1) most proteins of this family are highly abundant overall at this site;
(2) the amino acids at this position are conserved;
(3) the amino acid with higher occurrence frequency at the site has larger difference of physicochemical properties such as hydrogen bonds, charge difference, polarity strength, steric hindrance and the like with the amino acid of the LysOX protein at the site.
(2) Removal of the active site in the vicinity, i.e.away from the catalytic residue (glutamic acid position 104)
Figure BDA0003716200200000101
Amino acid residues within the range, excluding amino acid residues in an embedded or semi-embedded state.
After the above two-step screening, there remain 21 different sites, most of which are located on the surface of the LysOX protein molecule, as shown in fig. 1, and the arrows indicate the mutation sites.
(3) According to the crystal structure of the LysOX protein, the 21 mutant forms are analyzed in detail one by one, and mutants which can improve the thermal stability of the LysOX protein are screened.
The main judgment criteria are: (1) mutation should eliminate the original acting force form unfavorable for thermal stability, such as electrostatic repulsion, charge aggregation, etc.; (2) the mutation should not destroy the existing acting force form and stable protein structure which are beneficial to thermal stability; (3) mutations should introduce new forms of forces that favor thermal stabilization, such as hydrogen bonds, salt bridges, hydrophobic interactions, and the like.
Totally designing 5 single-point mutants, wherein mutation sites are respectively as follows:
S95A、T122V、D229N、A417V、G438D;
and (3) carrying out activity determination on the 5L-lysyl oxidase single-point mutants to screen out 4L-lysyl oxidase mutants with improved thermal stability, wherein the mutation sites are as follows: T122V, D229N, A417V and G438D, wherein the amino acid sequences of the corresponding single-point mutants are SEQ ID NO.2, SEQ ID NO.3, SEQ ID NO.4 and SEQ ID NO.5 respectively.
Construction, expression and purification of S5 mutant
S501: construction of LysOX protein Single Point mutants
Taking the recombinant plasmid pET28a-LysOX in the S1 as a template, taking a pair of complementary oligonucleotides with mutation sites as amplification primers, and carrying out whole plasmid PCR amplification by using KOD high-fidelity enzyme to obtain a recombinant plasmid with a specific mutation site;
the amplification primer pairs used were:
(1) The nucleic acid sequences of the upstream and downstream amplification primers of mutation site T122V are as follows:
F(SEQ ID NO.32):
5'-GAGTCATCATCACGAACTGGAGGACGACTATACACACAC-3';
R(SEQ ID NO.33):
5'-GTGTGTGTATAGTCGTCCTCCAGTTCGTGATGATGACTC-3';
(2) The nucleic acid sequences of the amplification primers upstream and downstream of the mutation site D229N are as follows:
F(SEQ ID NO.34):
5'-GAGAAGCTAGCAGAGAACTTCGACAAGGGATTCGACGA-3';
R(SEQ ID NO.35):
5'-TCGTCGAATCCCTTGTCGAAGTTCTCTGCTAGCTTCTC-3';
(3) The nucleic acid sequences of the upstream and downstream amplification primers of mutation site A417V are as follows:
F(SEQ ID NO.36):
5'-AATTACATGCGGAGGAGTAGCATCAACAGACCTACCAC-3';
R(SEQ ID NO.37):
5'-GTGGTAGGTCTGTTGATGCTACTCCTCCGCATGTAATT-3';
(4) The nucleic acid sequences of the upstream and downstream amplification primers of the mutation site G438D are as follows:
F(SEQ ID NO.38):
5'-AACCTAGGAGACACAGACGAGGCAGTACTACTAGCATC-3';
R(SEQ ID NO.39):
5'-GATGCTAGTAGTACTGCCTCGTCTGTGTCTCCTAGGTT-3';
the amplification conditions were: amplifying at 95 ℃ for 2min, then at 56 ℃ for 20sec, at 72 ℃ for 90sec for 30 cycles, and finally at 72 ℃ for 10min; recovering PCR amplification products by glue, digesting the glue recovery products for 2h at 37 ℃ by using DpnI enzyme, and degrading the initial template; and (3) transforming the digestion product into escherichia coli BL21 (DE 3) competent cells, coating the escherichia coli BL21 competent cells on an LB agar plate containing 100 mu g/mL kanamycin, carrying out overnight culture at 37 ℃, screening positive clones, and carrying out sequencing verification to obtain the recombinant bacteria containing the L-lysine oxidase single-point mutant.
S502: construction of LysOX protein combination mutants
Using a construction method similar to the single-point mutant to cumulatively combine the single-point mutants with improved stability, selecting a plurality of mutation sites from the amino acid sequence shown in SEQ ID No.1 for combination, for example, selecting 2-4 mutation sites from the 4 mutation sites for combination, and respectively obtaining different L-lysine oxidase combined mutants:
(1) 2 mutation sites are selected for combination, 6L-lysyl oxidase mutants with improved thermal stability and L-lysyl oxidase combined mutants can be constructed, and the combined mutation sites are respectively as follows:
T122V/D229N、T122V/A417V、T122V/G438D、D229N/A417V、D229N/G438D、A417V/G438D,
the amino acid sequences of the 6L-lysyl oxidase combination mutants with improved thermal stability are respectively SEQ ID NO.6, SEQ ID NO.7, SEQ ID NO.8, SEQ ID NO.9, SEQ ID NO.10 and SEQ ID NO.11;
(2) Selecting 3 mutation sites for combination, 4L-lysine oxidase combined mutants with improved thermal stability can be constructed, wherein the combined mutation sites are respectively as follows:
T122V/D229N/A417V、T122V/D229N/G438D、D229N/A417V/G438D、T122V/A417V/G438D,
the amino acid sequences of the 4L-lysine oxidase combined mutants with improved thermal stability are respectively SEQ ID NO.12, SEQ ID NO.13, SEQ ID NO.14 and SEQ ID NO.15;
(3) 4 mutation sites are selected for combination, 1L-lysine oxidase combined mutant with improved heat stability can be constructed, and the combined mutation sites are respectively as follows:
T122V/D229N/A417V/G438D,
the amino acid sequence of the 1L-lysyl oxidase combination mutant with improved thermal stability is SEQ ID No.16.
Experiment-characterization of enzymatic Properties of L-lysine oxidase mutants
The natural wild type L-lysine oxidase and the various L-lysine oxidase mutants provided by the embodiment are subjected to a thermal stability test, and according to a conventional L-lysine oxidase activity determination method, the method specifically comprises the following steps:
incubating the enzyme solution at a certain temperature, sampling at different treatment times, determining the residual activity percentage of L-lysine oxidase or L-lysine oxidase mutant, and plotting ln value of the residual activity percentage to time t (min), wherein the slope of the straight line is the inactivation constant k inact From t1/2= ln2/k inact Obtaining the half-life of the wild type L-lysine oxidase or the mutant of the wild type L-lysine oxidase at the temperature.
The experimental results show that the thermal stability of 4 single-point mutants and 11 combination mutants in the above L-lysine oxidase mutants is obviously improved, as shown in Table 1:
TABLE 1 characterization of enzymatic Properties of wild-type L-lysine oxidase, single-site mutants and combination mutants
Figure BDA0003716200200000131
Figure BDA0003716200200000141
From table 1, it can be seen that the L-lysyl oxidase mutants provided by the present invention include single-site mutants and combination mutants, which have longer half-lives at 45 ℃ than wild-type L-lysyl oxidase; especially the combination mutant, shows the additive effect of the thermal stability of the single-point mutant, and the half-life period of the combination mutant is about 3 times of that of the wild-type L-lysine oxidase. Therefore, the L-lysine oxidase mutant provided by the invention has better thermal stability and is suitable for catalyzing and oxidizing L-lysine at higher temperature.
While the invention has been illustrated and described in further detail by preferred embodiments, the invention is not limited to the disclosed examples and other variations can be derived therefrom by those skilled in the art without departing from the scope of the invention. Any modification, equivalent replacement, or improvement made within the spirit and principle of the present invention should be included in the protection scope of the present invention.

Claims (12)

1. A mutant having the amino acid sequence of SEQ ID No.1 with the following mutations:
A417V;
a417V and T122V;
a417V and D229N;
a417V and G438D;
a417V, T122V, and D229N;
a417V, T122V, and G438D;
a417V, D229N, and G438D;
T122V, D229N, a417V and G438D.
2. The mutant according to claim 1, wherein the amino acid sequences corresponding to the mutant are SEQ ID NO.4, SEQ ID NO.7, SEQ ID NO.9, SEQ ID NO.11, SEQ ID NO.12, SEQ ID NO.14, SEQ ID NO.15 and SEQ ID NO.16, respectively.
3. A gene sequence encoding the mutant of claim 2, wherein the gene sequence is configured as any one of SEQ ID No.19, SEQ ID No.22, SEQ ID No.24, SEQ ID No.26, SEQ ID No.27, SEQ ID No.29, SEQ ID No.30, SEQ ID No.31, wherein:
the nucleic acid sequence of the mutant with the coding mutation site of A417V is SEQ ID NO.19;
the nucleic acid sequence of the mutant with the mutation sites of T122V and A417V is SEQ ID NO.22;
the nucleic acid sequence of the mutant with the coding mutation sites of D229N and A417V is SEQ ID NO.24;
the nucleic acid sequence of the mutant with the mutation sites of A417V and G438D is SEQ ID NO.26;
the nucleic acid sequence of the L-lysine oxidase mutant for coding the mutant with mutation sites of T122V, D229N and A417V is SEQ ID NO.27;
the nucleic acid sequence of the mutant with the mutation sites of D229N, A417V and G438D is SEQ ID NO.29;
the nucleic acid sequence of the mutant with the mutation sites of T122V, A417V and G438D is SEQ ID NO.30;
the nucleic acid sequence encoding the mutant with mutation sites T122V, D229N, A417V and G438D is SEQ ID NO.31.
4. The gene sequence of claim 3, wherein the nucleic acid sequence of the amplification primer pair of the mutation site T122V is SEQ ID NO.32 and SEQ ID NO.33.
5. The gene sequence of claim 3, wherein the nucleic acid sequence of the amplification primer pair of the mutation site D229N is SEQ ID NO.34 and SEQ ID NO.35.
6. The gene sequence of claim 3, wherein the nucleic acid sequence of the amplification primer pair of the mutation site A417V is SEQ ID NO.36 and SEQ ID NO.37.
7. The gene sequence of claim 3, wherein the nucleic acid sequence of the amplification primer pair of the mutation site G438D is SEQ ID NO.38 and SEQ ID NO.39.
8. A soluble protein configured to comprise the mutant of any one of claims 1-2.
9. An immobilized enzyme configured to comprise the mutant of any one of claims 1-2.
10. A recombinantly engineered cell configured to comprise the coding sequence of a mutant according to any one of claims 1 to 2.
11. A recombinant vector configured to comprise the coding sequence of the mutant of any one of claims 1-2.
12. Use of the mutant according to any one of claims 1 to 2, the soluble protein according to claim 8, the immobilized enzyme according to claim 9, the engineered recombinant cell according to claim 10 or the recombinant vector according to claim 11 for the catalytic oxidation of L-lysine.
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