CN114561472A - Kit for detecting or assisting in detecting tumor-related gene variation and application thereof - Google Patents
Kit for detecting or assisting in detecting tumor-related gene variation and application thereof Download PDFInfo
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Abstract
The invention provides a kit for detecting or assisting in detecting tumor-related genetic variation and application thereof, wherein the kit comprises a set of DNA probes, wherein the set of DNA probes comprises the nucleotide sequences shown in SEQ ID NO: 1-SEQ ID NO: 360 as shown. The kit can detect 90 genes (product of Panel), and can detect biomarkers corresponding to solid tumor targeted drugs or immune checkpoint inhibitors which are approved to be on the market by the Food and Drug Administration (FDA)/national drug administration (NMPA) at one time. The biomarker for guiding accurate treatment is found by collecting tumor tissue samples and whole blood samples of the examined person, and performing tumor content evaluation, DNA extraction, library establishment, capture, sequencing, bioinformatics analysis and medical interpretation.
Description
Technical Field
The invention relates to the field of biomedicine, in particular to a kit for detecting or assisting in detecting tumor-related gene variation and application thereof.
Background
According to statistics of national cancer centers, the number of new cancer cases in 2015 in China is 186.39/10 ten thousand, the death rate is 105.84/10 ten thousand, and the health of human beings is seriously threatened. Clinical studies have classified tumors as a gene disorder, mainly due to activation of proto-oncogenes or inactivation of suppressor genes. With the great progress of high-throughput sequencing (NGS) and biotechnology, a plurality of driver genes related to the occurrence and development of cancer and biomarkers for guiding tumor treatment are discovered, and a plurality of drugs are developed aiming at the driver genes and the biomarkers, so that precise treatment can be performed according to the detected driver gene mutation or biomarker in clinical treatment, and the treatment mode of tumors is changed from traditional treatment to precise treatment.
The existing technical means which can be used for precise treatment include Sanger sequencing (first generation sequencing), RT-PCR (fluorescent quantitative PCR), IHC (immunohistochemistry), FISH (fluorescence in situ hybridization) and the like. However, the above techniques all have corresponding disadvantages. For example, Sanger sequencing is a gold standard for sequencing, but the sequencing technology has low sequencing flux because only one sequence can be obtained in one reaction; although individual reactions are inexpensive, the cost of obtaining large quantities of sequencing is high; and the detection sensitivity is low, and generally, only the mutation with the mutation abundance of more than 20 percent can be detected, so that the possibility of missing detection exists for some low-frequency mutations. However, RT-PCR can only detect known sites, and can not find unknown sites, which is not beneficial to the exploration of new targets. IHC is mainly used for detecting protein expression, and cannot detect point mutation (SNV), small fragment insertion deletion (Indel), and the like of genes, and detection that requires medication according to the gene SNV/Indel cannot be achieved by IHC. Similarly, although the FISH detection is a gold standard for identifying gene Fusion (Fusion) and amplification (CNV), the detection is not suitable for SNV/Indel, and the application range is limited.
Disclosure of Invention
The invention aims to overcome the defects of detecting gene variation in Sanger sequencing (first generation sequencing), RT-PCR (fluorescent quantitative PCR), IHC (immunohistochemistry) and FISH (fluorescence in situ hybridization) technologies, thereby providing a kit for accurately detecting tumor-related gene variation and application thereof.
The invention provides a kit for detecting or assisting in detecting tumor-related genetic variation, which comprises a set of DNA probes, wherein the set of DNA probes comprises the nucleotide sequences shown in SEQ ID NO: 1-SEQ ID NO: 360 as shown.
Preferably, the kit further comprises a hybridization reaction solution.
The hybridization reaction solution comprises xGen®2x Hybridization Buffer and xGen® 2x Hyb Buffer Enhancer。
The probe set comprises SEQ ID NO: 1-SEQ ID NO: the DNA probes shown at 360 were mixed equimolar.
The above-mentioned set of DNA probes.
The kit for detecting or assisting in detecting tumor-related gene variation or the kit of DNA probes is applied to any one of the following 1) to 5):
1) detecting or assisting in detecting tumor-associated gene variation;
2) the accurate treatment mode of the tumor patient is predicted or predicted in an auxiliary mode;
3) aiding diagnosis or diagnosing a patient with a tumor;
4) predicting the tumor onset risk of the subject;
5) and (5) carrying out molecular typing and prognosis guidance on tumor patients.
The kit or the complete set of DNA probes are applied to the preparation of any one of the following products 1) to 5):
1) detecting or assisting in detecting tumor-associated gene variation;
2) the accurate treatment mode of the tumor patient is predicted or predicted in an auxiliary mode;
3) aiding in the diagnosis or diagnosis of a patient with a tumor;
4) a product for predicting the risk of developing a tumor in a subject;
5) and (5) carrying out molecular typing and prognosis guidance on tumor patients.
The precise treatment is targeted or immunotherapy and the like. The precise treatment refers to the treatment by selecting corresponding drugs according to the change of the molecular biology of tumor cells.
Preferably, the variation is a point mutation, a small fragment insertion deletion, a copy number variation, a gene fusion and/or a microsatellite instability.
Preferably, in the above application, the tumor is endometrial cancer, ovarian cancer, breast cancer, prostate cancer and/or pancreatic cancer.
A method for detecting or assisting in detecting tumor-associated genetic variation, comprising the steps of:
(1) constructing a target genome DNA library;
(2) hybridizing the above-mentioned complete set of DNA probes with the DNA library to obtain a hybridization product;
(3) and performing second-generation sequencing on the hybridization product, and analyzing the variation condition of the target genome DNA according to a sequencing result.
Preferably, in the above method, the tumor is an endometrial, ovarian, breast, prostate and/or pancreatic cancer.
The invention has the following advantages:
1. the kit can detect 90 genes (a Panel product), can accurately detect tumor-related gene variation, and can detect the biomarkers corresponding to the solid tumor targeted drugs or immune checkpoint inhibitors approved by the U.S. Food and Drug Administration (FDA)/national drug administration (NMPA) at one time. The biomarker for guiding accurate treatment is found by collecting tumor tissue samples and whole blood samples of the examined person, and performing tumor content evaluation, DNA extraction, library establishment, capture, sequencing, bioinformatics analysis and medical interpretation. Second, patients can also be molecularly typed to guide patient prognosis. Finally, the genetic tumor of the detected person can be evaluated to prompt the family genetic risk, so as to realize early discovery, early diagnosis and early treatment.
2. The advantages of the invention using high-throughput sequencing (NGS) technology include high throughput (several to hundreds of genes detected at one time or even whole exome), high sensitivity, lower detection limit, stronger exploration ability, and the discovery of unknown mutations, detection of multiple mutation types at one time (SNV/Indel/Fusion/CNV), and detection of genomic biomarkers (microsatellite instability, etc.). The defect of the existing detection is overcome, and the comprehensive guidance of the accurate treatment can be realized only through one-time detection.
3. The detection object comprises the biomarkers corresponding to the currently marketed targeted drugs and immune checkpoint inhibitors, and can fully guide the accurate treatment of tumors.
Meanwhile, Homologous Recombination Repair (HRR) genes related to ovarian cancer, breast cancer, prostate cancer and pancreatic cancer are optimized according to the National Cancer Comprehensive Network (NCCN) guideline, the American society of gynecologic tumors (SGO) and the like, and the method is simple and accurate.
The invention also comprises genes and biomarkers for guiding the molecular typing of endometrial cancer, and the endometrial cancer can be precisely molecularly typed, so that prognosis is guided.
4. The invention also comprises a genetic tumor related gene, so that the risk of the genetic tumor can be fully evaluated. When the examinee has germ disease or genetic susceptibility gene mutation which may cause disease, the healthy people who do not have disease in the family are advised to carry out genetic evaluation, which is helpful for understanding the disease risk of the corresponding tumor in advance.
5. The genes selected by the invention comprise genes related to the occurrence and development mechanisms of endometrial cancer, ovarian cancer, breast cancer, prostate cancer and pancreatic cancer, and the practicability is higher than that of whole exome sequencing. Valuable information can be provided both in clinical medication guidance and in subsequent biomarker detection.
Detailed Description
Example kit for detecting tumor-associated genetic variation and application thereof
Kit for detecting tumor-related gene variation
The kit provided by the embodiment of the invention comprises SEQ ID NO: 1-SEQ ID NO: 360 DNA probes shown in 360.
The acquisition process of the probe comprises the following steps:
in order to realize accurate treatment on endometrial cancer, ovarian cancer, breast cancer, prostate cancer and pancreatic cancer, a target region capture next-generation sequencing technology is adopted, and all exon regions of 90 genes related to tumor personalized medicine and genetic risk (see table 1), hot spot regions of partial genes and chemotherapy drug related SNP sites are obtained through analysis and selection. Therefore, the biomarkers of gene point mutation (SNV), small fragment insertion deletion (Indel), Copy Number Variation (CNV), gene Fusion (Fusion), microsatellite instability (MSI) and the like which have clear clinical significance to endometrial cancer, ovarian cancer, breast cancer, prostate cancer and pancreatic cancer are detected, and the precise treatment of the tumor is further guided. Meanwhile, the gene mutation detected by a tumor patient can be used for assisting the grouping of corresponding clinical tests. Provides guiding significance for clinical treatment, diagnosis and discovery of new targets.
And designing probes according to all exon regions of the genes related to the tumor personalized medicine and the genetic risk, hot spot regions of partial genes and SNP sites related to chemotherapeutic drugs. The design method of the probe is as follows: the parameters 1X tilling and 120 nucleotides in length were measured using the on-line probe design tool from IDT corporation (https:// sg. idtdna. com/sessionTimeout. aspx). And evaluating the coverage degree of the probe of the IDT finished design, and redesigning the probe by using a multi-X tilting strategy for a low-coverage area in an attempt to ensure that all target areas are covered by the probe.
TABLE 190 Gene List
Secondly, detecting tumor-related gene variation by using kit
Step 1: and extracting the DNA of the detection sample (the sample DNA is blood sample DNA or tumor tissue sample DNA).
Step 2: and (5) constructing a DNA library of the test sample. The method mainly comprises the following steps: DNA breaking, end repairing, joint connection, library amplification and purification.
The construction of DNA library includes the following steps
1. Sample preparation
For paraffin-embedded Tissue samples, QIAamp DNA FFPE Tissue Kit from QIAGEN was used, and for Blood samples, QIAamp DNA Blood Mini Kit was used, following the exact procedure described herein. The extracted DNA needs to be quantitatively detected, and the extracted DNA uses Qubit®The dsDNA HS Assay Kit and a matched instrument are used for detection, and the total extraction amount is not less than 50 ng.
2. DNA library construction
Library construction was performed using the commercial Library construction Kit IDT xGEN Prism DNA Library Prep Kit (IDT, cat No. 10006203) according to the following protocol.
2.1 sample interruption
1) The breaking system is shown in table 2.
DNA extracted from the QIAamp DNA FFPE Tissue Kit (FFPE DNA for short) was disrupted by Covaris, and the blood genomic DNA was disrupted by Covaris or Bioruptor.
2) The Covaris interruption operation is as follows:
the breaking parameters are shown in table 3.
3) Bioruptor disruption was performed as follows:
a. the interrupting instrument interrupting parameters are shown in table 4.
b. The broken DNA is checked by 2% agarose gel electrophoresis, 50bp and D2000 ladder are used, the voltage is 150V, and the electrophoresis band is qualified at 200bp-300 bp.
2.2 end repair
1) An End Repair Mix was prepared according to table 5.
2) Referring to table 6, the End Repair reaction program was set up with the hot lid temperature adjusted to 40 ℃.
3) The sample was placed in a PCR instrument and the End Repair reaction program was run.
4) The used reagents were returned to the original kit and stored at-20 ℃.
2.3 preparation of Ligation 1 Mix
A Ligation 1 Mix was prepared as shown in Table 7.
2.4 purification after repair of the termini
1) The AMPure XP magnetic beads are taken out of a refrigerator at 4 ℃, and the temperature is balanced for 30 min.
2) 147.5. mu.L (2.5X) of AMPure XP magnetic beads were added to the end-repair sample and mixed well.
3) Standing at room temperature for 10min, transferring to magnetic rack, standing for 5min until the liquid is completely clarified, discarding the supernatant, and paying attention to avoid sucking magnetic beads.
4) 160 μ L of 80% (v/v) ethanol was added slowly along the tube side wall, left to stand for 30s, and the supernatant was removed using a pipette.
5) Repeating the step 4) once.
6) The residual ethanol was removed by pipetting with a 10. mu.L pipette, and the mixture was left to dry at room temperature for 3 min.
7) Add 30. mu.L Ligation 1 Mix to the sample tube, shake and Mix, and centrifuge instantaneously.
2.5、Ligation 1
1) Referring to Table 8, the Ligation 1 reaction program was set up and the temperature of the hot lid of the PCR apparatus was adjusted to 70 ℃.
2) The Ligation 1 reaction program was run.
2.6、Ligation 2
1) Ligation 2 Mix was prepared according to Table 9.
2) The PCR reaction tube of Ligation 1 was removed from the PCR apparatus, subjected to instantaneous centrifugation, and placed on ice. Each reaction tube is subpackaged with 10 mu L of Ligation 2 Mix, evenly mixed by oscillation and instantaneously centrifuged.
3) Referring to Table 10, the Ligation 2 reaction program was set up to adjust the temperature of the hot lid of the PCR apparatus to 70 ℃.
4) The sample was placed in a PCR instrument and the Ligation 2 reaction program was run.
2.7 purification after Adaptor ligation
1) Add 100. mu.L (2.5X) PEG/NaCl to the reacted sample after Ligation 2 and mix well.
2) Standing at room temperature for 10min, transferring to magnetic rack, standing for 5min until the liquid is completely clarified, discarding the supernatant, and paying attention to avoid sucking magnetic beads.
3) 160 μ L of 80% (v/v) ethanol was added slowly along the tube side wall, left to stand for 30s, and the supernatant was removed using a pipette.
4) Repeating the step 3) once.
5) The residual ethanol was removed by pipetting with a 10. mu.L pipette, and the mixture was left to dry at room temperature for 3 min.
6) Add 20. mu.L nuclease-free water to the sample tube, shake and mix well, and centrifuge instantaneously.
2.8 PCR amplification
1) PCR reaction systems were prepared in PCR tubes according to the system in Table 11.
2) Shaking and mixing evenly, and carrying out instantaneous centrifugation to ensure that all reaction liquid is placed at the bottom of the PCR tube.
The PCR amplification procedure is shown in Table 12.
2.9 library purification and quantification
1) Taking out AMPure XP magnetic beads from a refrigerator at 4 ℃, and balancing for 30min at room temperature.
2) The PCR product was removed from the PCR instrument, centrifuged instantaneously, placed on a magnetic stand and allowed to stand for 5min, and the supernatant was transferred to a new tube.
3) Add 65. mu.L (1.3X) of AMPure XP magnetic beads to the PCR product, pipette (range 65. mu.L) down to 20, mix well.
4) Standing at room temperature for 10min, transferring to magnetic rack, standing for 5min until the liquid is completely clarified, discarding the supernatant, and paying attention to avoid sucking magnetic beads.
5) 160 μ L of 80% (v/v) ethanol was added slowly along the tube side wall, left to stand for 30s, and the supernatant was removed using a pipette.
Note: if the magnetic beads are absorbed when the waste liquid is discarded, standing for 2min, and discarding the supernatant after the magnetic beads are absorbed.
6) Repeating the step 5) once.
7) The residual ethanol was removed by pipetting with a 10. mu.L pipette, and the mixture was left to dry at room temperature for 3 min.
8) Add 32. mu.L TE Buffer PH 8.0 to the sample tube, mix well with shaking, centrifuge instantaneously, incubate for 8min at room temperature.
9) The sample tube was placed on a magnetic rack for 5min until the liquid was completely clear, and 30 μ Ι _ of supernatant was carefully transferred to a new 1.5ml centrifuge tube using a pipettor.
10) The library Qubit was quantified using a Qubit 4.0 fluorescence quantifier.
2.10 library quality testing
The results are shown in Table 13.
2.11, storing the library, and storing the library in a refrigerator at-20 ℃ in an amplification area.
And step 3: the probes (SEQ ID NO: 1-SEQ ID NO: 360) were hybridized with DNA libraries for capture, eluted, and sequenced. Probes were synthesized by bio-companies.
Library hybridization procedures were as follows:
1. mixing Human Cot DNA and xGen®Shaking and mixing the Universal Blockers-TS Mix evenly, and performing instantaneous centrifugation.
2. Hybridization reaction solution Mix was prepared according to table 14.
3. Add 7. mu.L Mix and 500ng-1ug DNA library to the centrifuge tube, Mix well with shaking, and centrifuge instantaneously. And drying in a vacuum concentrator for later use.
4. According to Table 15, XGen ®2x Hybridization Buffer and xGen ®And (3) oscillating and uniformly mixing the 2x Hyb Buffer Enhancer, and performing instantaneous centrifugation to obtain a hybridization reaction solution.
5. And adding the hybridization reaction solution and 4 mu L of probe into the evaporated sample, and incubating for 10min at 25 ℃ on a constant-temperature mixing machine.
6. And (5) putting the sample into a PCR instrument, clicking the program and starting to operate. The PCR procedure is shown in Table 16.
The library elution procedure was as follows:
1. streptavidin magnetic bead cleaning
1) Will xGen®2x Hybridization Buffer and xGen®And (3) oscillating and uniformly mixing the mixture by using 2X Hyb Buffer Enhancer, and performing instantaneous centrifugation.
2) A magnetic bead suspension Mix was prepared as shown in Table 17.
3) Dynabeads M-270 Streptavidin was shaken and mixed well. The amount of Dynabeads M-270 Streptavidin used per library was 50. mu.L.
4) Each library 1XBead Wash Buffer (nucleic-Free Water and xGen)®2X Bead Wash Buffer prepared according to the volume ratio of 1: 1) is 100 muL, 1X Bead Wash Buffer with the corresponding volume is added into a tube, evenly mixed by oscillation (n X100 muL), subjected to instantaneous centrifugation, placed in a magnetic frame for 1min, and a supernatant is removed by using a pipette after the liquid is completely clarified.
5) Repeat step 4 twice.
6) The residual liquid was aspirated with a pipette.
7) The amount of each library bead suspension was 17. mu.L, and a corresponding volume of bead suspension was added to the tube for suspension.
8) A corresponding number of PCR tubes were prepared, and 17. mu.L of a mixture of magnetic beads and a suspension was dispensed into each of the PCR tubes.
9) The PCR tube containing the magnetic bead suspension was placed in a PCR instrument and incubated for 5 min.
2. Streptavidin magnetic bead capture
1) After 4-16h of hybridization reaction, the resuspended streptavidin magnetic beads are added into the hybridization system twice after being mixed evenly. Transfer the sample tube to the running PCR instrument and click next.
2) Incubate at 65 ℃ for 45min, shake and mix once every 15min, ensure the magnetic beads are completely resuspended.
3. Thermal elution
1) The PCR instrument setup program was turned on (see Table 18).
2) The filled containers will contain 1X WashBuffer I (nucleic-Free Water and xGen)®10 XWashbuffer I in a 1:9 ratio) and 1X Stringent Washbuffer (nucleic-Free Water and xGen)®10X Stringent Wash Buffer in a volume ratio of 1: 9) was placed in a PCR apparatus and preheated.
3) After incubation at 65 ℃ for 45min, transferring the hybridization sample captured by the streptavidin magnetic beads into a PCR tube filled with 1X Wash Buffer I and mixing uniformly. The PCR tube was placed on a magnetic stand for 1min, and after the liquid was completely clarified, the supernatant was removed thoroughly with a pipette.
4) Transferring the 1X Stringent Wash Buffer into a PCR tube filled with sample magnetic beads, mixing uniformly, covering the tube cap tightly, and putting the tube cap into a PCR instrument to incubate for 5min at 65 ℃. After the time, the PCR tube with the sample is placed on a magnetic rack until clarified, and the supernatant is removed thoroughly with a pipette.
5) Repeating the step 4) once.
4. Eluting at normal temperature
1) The PCR tube containing the sample was removed from the magnetic stand, and 150ul of 1 XWash Buffer II (nucleic-Free Water and xGen) was pipetted from the dispensing tube®10x Wash Buffer II prepared in a volume ratio of 1: 9) into a PCR tube with magnetic beads, incubating at room temperature for 2min, uniformly mixing on a constant-temperature mixer for 30s, standing for 30s, and alternately mixing to ensure full mixing. The PCR tube was centrifuged instantaneously and then allowed to stand on a magnetic stand for 1min, and the supernatant was removed thoroughly with a pipette.
2) The PCR tube containing the sample was removed from the magnetic rack, subjected to instantaneous centrifugation, and then placed on the magnetic rack, and a small amount of residual Buffer was removed by a pipette.
3) Add 21. mu.L of nucleic-Free Water to the tube and mix well by aspiration.
4) KAPA HiFi HotStart ReadyMix, primers FCF (10. mu.M) and FCR (10. mu.M) were thawed 15-20min in advance at 4 ℃.
5) The reaction system was prepared in a PCR tube or a centrifuge tube according to Table 19.
6) And (3) subpackaging the configured MIX into a PCR tube with a labeled sample serial number.
7) Transfer 20. mu.L of the product with magnetic beads to the corresponding PCR tube with a pipette, and mix well.
8) The following procedure was run on a PCR instrument (table 20).
Library purification steps were as follows:
1) and (3) oscillating and uniformly mixing the AMPure XP magnetic beads, sucking 60 mu L of the mixture and adding the mixture into a labeled PCR tube.
2) After PCR amplification, the PCR tube was removed and placed in a magnetic rack for 2min, and after the liquid was completely clarified, the supernatant was transferred to the PCR tube in the magnetic rack.
3) Shaking and mixing, and incubating at room temperature for 10 min.
4) The PCR tube was centrifuged instantaneously and placed on a magnetic stand for 5min, after the liquid was completely clarified, the supernatant was removed (5-10. mu.L of liquid was left).
5) 200 μ L of 80% ethanol was added slowly along the side walls of the PCR tube, left to stand for 30s, and the supernatant was removed using a pipette.
6) Repeating the step 5) once.
7) The PCR tube was removed from the magnetic rack, placed on the magnetic rack after transient centrifugation, and a small amount of residual ethanol was removed using a pipette, taking care not to attract the magnetic beads.
8) And opening a PCR tube cover, and placing the magnetic beads at room temperature for drying, wherein the surfaces of the magnetic beads have no liquid to reflect light, and the magnetic beads cannot be dried excessively.
9) Add 31. mu.L of TE Buffer pH 8.0 to the PCR tube, mix well with shaking, incubate for 5min at room temperature.
10) The PCR tube was centrifuged briefly and placed on a magnetic rack for 1-2min until the liquid was clear, and 30. mu.L of the supernatant was carefully transferred to a new 1.5mL centrifuge tube with a pipette, taking care not to attract the beads.
11) Performing library quality inspection, and performing machine sequencing after the library quality inspection is qualified.
And 4, step 4: and (4) performing bioinformatics analysis on the sequencing result to obtain a mutation result of the detection sample.
And removing the adaptor sequence and the low-quality base sequence introduced in the experiment and sequencing links by using fastp (v0.19.4) software to obtain high-quality sequencing data. Wherein, the required data quality meets Q30 more than or equal to 80%, otherwise, the quality control is judged not to pass.
The above-described data satisfying the requirements were aligned to hg19 (GRCh 37) reference genome using bwa (0.7.17) sequence alignment software, generating BAM format files recording the alignment results. BAM files were then sorted, de-duplicated, and base quality corrected using Samtools (v 1.9) and genoanalysis tk (v 4.1.0) to obtain the final BAM file, and subsequent mutation analysis was performed based on this file.
Wherein, the comparison rate of the reference genome is more than or equal to 90 percent, the average sequencing depth of the target area of the control sample is more than or equal to 100 times, the average sequencing depth of the target area of the tumor sample is more than or equal to 500 times, the proportion of sites with the depth in the target area larger than the average depth multiplied by 0.2 is more than or equal to 90 percent, and the matching consistency of the tumor and the control sample is more than or equal to 90 percent. If any of the conditions is not met, the quality control is judged to fail, and the experiment needs to be carried out again.
Analyzing point mutation and insertion deletion mutation in a sample by using a variation identification module of genomeAnalystk (v4.1.0); analyzing the gene fusion event in the sample by using a fusion analysis module; copy number variation analysis modules (including the cnvkit (v 0.9.6) software and filter modules) were used to analyze copy number variation in samples. Resulting in mutations that can eventually enter the annotation process.
The resulting mutations were annotated as follows: the point mutation, small fragment insertion deletion, gene fusion and copy number variation are annotated by using a variation annotation module built based on Annovar (v2018.04.16), and the database used for annotation comprises clinvar, cosmic, 1000 genes and the like.
In addition, a microsatellite instability analysis module is used to analyze the microsatellite instability (MSI) of the sample.
And 5: and (4) annotating mutation results, judging the pathogenicity of mutation and providing corresponding information for clinic.
Based on the annotated results of the variation in step 4, the variation is classified for detected non-benign/likely-benign variations according to the classification criteria of variation as specified in ACMG genetic variation Classification Standards and Guidelines and the Cancer variation Interpretation Guidelines (Standards and Guidelines for the Interpretation and Reporting of Sequence Variants in Cancer) jointly issued by the American society of Pathology (AMP)/American society of clinical Oncology (ACSO)/American society of pathologists (CAP).
The following is described for endometrial cancer patients: according to the using method of the kit, the related gene variation detection is carried out on the endometrial cancer patient, and the result shows that the POLE c.1231G > T p.V411L somatic missense variation is detected, the variation abundance is 32.1%, and therefore the patient belongs to a POLE mutant type (POLE mut) endometrial cancer patient. Based on TCGA molecular typing studies, the prognosis for the POLE mutant (POLE mut) endometrial cancer patients is best. According to the molecular typing prognostic stratification requirements proposed by the ESGO/European radiation oncology Association (EST)/European pathologist Association (ESP) guidelines, the POLE mutant (POLE mut) endometrial cancer of stage I-II (no residual lesions) is classified as a low risk group and the omission of adjuvant therapy is considered.
The following description will be made taking ovarian cancer patients as an example: according to the using method of the kit, the ovarian cancer patient is subjected to tumor-related genetic variation detection, and the result shows that BRCA2 c.8168A > T p.D2723V embryonic system heterozygous pathogenic mutation is detected, and the patient can benefit from Olapari, Nilapari, Rukapari, Fluxapari, Pamipari and Talazolpanil according to the approval of the United states Food and Drug Administration (FDA)/national drug administration (NMPA), so that a clinician can establish a more appropriate treatment scheme for the patient according to the genetic detection result. And the patient is a hereditary breast cancer-ovarian cancer syndrome patient, and the patient is advised to carry out risk management under the guidance of a clinician or a genetic counselor certified by professional qualification. In addition, the relatives of the patients are advised to carry out the verification of the relevant sites so as to understand the onset risk of the corresponding tumors.
The following description will be made taking a breast cancer patient as an example: according to the using method of the kit, relevant gene variation detection is carried out on a breast cancer patient, the result shows that the ERBB2 gene amplification is detected, the copy number is 20, the patient can benefit from pyrroltinib, Enmetuzumab, lapatinib, Nelatinib, pertuzumab, trastuzumab, Tucaninib, Imitumumab, Fam-trastuzumab deruectan-nxki and Vidicipin monoclonal antibody according to the approval of the United states Food and Drug Administration (FDA)/national drug administration (NMPA), and a clinician can make a more appropriate treatment scheme for the patient according to the gene detection result.
Taking prostate cancer patients as an example, the following description is given: according to the using method of the kit, relevant gene variation of a prostate cancer patient is detected, and the result shows that the somatic nonsense variation of CHEK2 c.1043T > G p.Leu348 is detected, the variation abundance is 23.6%, and the somatic missense variation of AR c.2632A > G p.T878A is detected, and the variation abundance is 35.4%. According to the detection result, the patient is prompted to possibly benefit from the olaparide and can resist drugs such as abiraterone and enzalutamide. Therefore, the clinician can select more beneficial treatment drugs for the patient according to the gene detection result, thereby improving the clinical benefit of the patient.
Thirdly, the performance of the kit is fully verified, and the specific verification conditions are as follows
1. Initial volume assessment of reservoir building
The effect of different starting amounts on the test results was evaluated. 3 samples were selected and initially pooled using 30ng, 50ng and 100ng of DNA, respectively, with three replicates per sample. And (4) comparing the influence of the initial amount on the detection result. Thereby evaluating whether the quality control of the sample passes and whether the target variation is detected under different initial quantities. The results showed that the sample quality control passed under the condition of 30ng and all the objective mutations were detected, so that the minimum input amount was 30 ng.
2. Positive rate of agreement
22 samples were tested, and the types of variation included Single Nucleotide Variation (SNV), small fragment insertion deletion (Indel), and Copy Number Variation (CNV). All variations were verified by digital PCR or first-generation sequencing, QPCR, etc. The results showed that all the target variations were detected in total, i.e., the positive site coincidence rate was 100%.
3. Negative rate of agreement
20 negative samples were tested to assess the presence of the detection of the target positive mutation. The results showed that all the target variants were detected, i.e., the negative match rate was 100%.
4. Minimum limit of detection
4 samples were selected, the types of variation including Single Nucleotide Variation (SNV), small fragment insertion deletion (Indel), Copy Number Variation (CNV) and Fusion (Fusion), and the sample sources were standard and clinical samples. Each mutation frequency was performed in 3 replicates. Setting the variation frequency: the expected frequencies for SNV and Indel settings were 1%, 2%, 5%, CNV settings were 2.5, 3, 3.5 copies, and Fusion settings were 1%, 2%, 5%. Finally, the lowest expected frequency of all the mutation sites is used as the lowest detection limit.
The final results show that: 1) the SNV mutation site frequency is detected in all sites of 2% or more, so the minimum detection limit of SNV is 2%. 2) The Indel mutation sites are detected in all sites with a frequency of 5% or more, and thus the minimum detection limit of Indel is 5%. 3) Since all CNV variant copy numbers were detected at 3 or more, the minimum CNV detection limit was 3. 4) Fusion mutation sites were detected at a frequency of 5% or more, and thus the minimum detection limit of Fusion was 5%.
5. Repeatability of
6 clinical specimens were selected and tested for 3 intralot replicates and 3 interbay replicates. The results show that the repeatability measurements within and between batches of the same sample are consistent.
6. Interferent analysis
6 samples were taken and the interfering substances bilirubin (concentration 342. mu.M), triglyceride (concentration 37 mM), hemoglobin (concentration 2 g/L) and 80% (v/v) ethanol were added, 3 replicates per sample per treatment. The results show that: bilirubin (concentration 342. mu.M), triglyceride (concentration 342 mM), hemoglobin (concentration 2 g/L) and 80% (v/v) ethanol all had no effect on the assay results.
7. DNA quality assessment
19 samples of different quality grades were selected and 100ng of DNA was used for the construction of the library. Thereby evaluating the effect of samples of different masses on the detection of variation. The mutation sites of the samples with DNA main bands more than 500bp can be detected.
8. Tumor cell proportion evaluation
The verified tissue samples have 20% -90% of tumor content, and all positive sites are detected. Namely, the kit (panel) can detect a sample with the tumor content being more than or equal to 20 percent.
9. Sample stability assessment
The tissue samples used in the verification are collected from 3 months to 2021 months in 2019, and all positive sites are detected. Namely, the kit (panel) can detect tissue samples which are preserved for less than 2 years.
It should be understood that the above examples are only for clarity of illustration and are not intended to limit the embodiments. Other variations and modifications will be apparent to persons skilled in the art in light of the above description. And are neither required nor exhaustive of all embodiments. And obvious variations or modifications of the invention may be made without departing from the spirit or scope of the invention.
Sequence listing
<110> Purui reference technologies (Beijing) Ltd
Privilego Biomedicine (Suzhou) Ltd
Beijing Prancoren medical laboratory Co., Ltd
<120> kit for detecting or assisting in detecting tumor-related gene variation and application thereof
<160> 360
<170> SIPOSequenceListing 1.0
<210> 1
<211> 120
<212> DNA
<213> Homo sapiens
<400> 1
atcttgtagg ggacaagtaa tctattccag caggtagata ctaatctttc ttttcattct 60
aagtttatac tctaaagttt tattttgtca gactttttca cagggtacct ttagtggttg 120
<210> 2
<211> 120
<212> DNA
<213> Homo sapiens
<400> 2
tccttttctt ccagacattc agaaatatat tccatgctat cagcttttta ggtaagtagt 60
agtgctagta agtaaatgat ccattgtgaa aattactctc tgcaagtgaa atagttttta 120
<210> 3
<211> 120
<212> DNA
<213> Homo sapiens
<400> 3
tttgtgctcg gcgcactcgc tttccagcac ctcaacacgg actcggacac ggtgagccga 60
gggacggggc ggggtccggc gtcgcctggg aagagccctg cgcgcggcct gcctccccgc 120
<210> 4
<211> 120
<212> DNA
<213> Homo sapiens
<400> 4
tgggccccgc ctcgctgcca ccacagggtc ttgcctccgc gcgccccgcc ctcgtcctct 60
tgtgtagcct gaggcggcgg tagcatggag ggggagagta cgtcggcggt gctctcgggc 120
<210> 5
<211> 120
<212> DNA
<213> Homo sapiens
<400> 5
tcctgcggtg ccttcctcga gtctggcctg ctttccatcc tgctaagtac ttggggcatt 60
tccctctttg ggtaaggtgt ggtcttccct gtcctggcat tagacacaag gcagtgggcc 120
<210> 6
<211> 120
<212> DNA
<213> Homo sapiens
<400> 6
gggtgggggg acatccagag gtctttgagt ccagccctct gcctccaggc cacgcccact 60
cagtgtcgtc agagccccct gtgcctgagg cgtgcgcggc tcggagccct gccctcggag 120
<210> 7
<211> 120
<212> DNA
<213> Homo sapiens
<400> 7
gcggcctcca gcccggcccc gcccagcgcc ggcccgcggg gatgcggagc ggcgggcgcc 60
ggaggccgcg gcccggctag gcccgcgctc gcgcccggac gcggcggccc ggtgagtccc 120
<210> 8
<211> 120
<212> DNA
<213> Homo sapiens
<400> 8
cccagcgcac gcagcgcggc ccgaagacgg gagcaggcgg ccgagcaccg agcgctgggc 60
accgggcacc gagcggcggc ggcacgcgag gcccggcccc gagcagcgcc cccgcccgcc 120
<210> 9
<211> 120
<212> DNA
<213> Homo sapiens
<400> 9
gcctcctgca tgtcctgctg ccctgagctg tcccgagcta ggtgacagcg taccacgctg 60
ccaccatgaa tgaggtgtct gtcatcaaag aaggctggct ccacaagcgt ggtaagaggc 120
<210> 10
<211> 120
<212> DNA
<213> Homo sapiens
<400> 10
gtgggcagaa cagccagagg gcctcagagc ccggcgtcct cagggaaggg gctggtgtgg 60
aatcccctcc cgccctgacc agctcctctc ttgtcttgca gactgtgccc tgtccacggt 120
<210> 11
<211> 120
<212> DNA
<213> Homo sapiens
<400> 11
cagcgtggcg atgggcgggg gtagagcccc gccggagagg ctgggcggct gccggtgaca 60
ggtgagtgcg ccagcgcgtg tccccgaacg ccccccccac gatggtcgcg tccgggcccc 120
<210> 12
<211> 120
<212> DNA
<213> Homo sapiens
<400> 12
gggcgggggg ggccgcgccg tgctagccgt tgggcctgcc tcggaggagg cgtcgccgcc 60
gccgctgccg ctgccggcgc cgttgccgct gccgggaaac acaaggaaag ggaaccagcg 120
<210> 13
<211> 120
<212> DNA
<213> Homo sapiens
<400> 13
gaaattacag ggatttaggg caattaactt tcattctctt ccctcttcac ctcaaataca 60
catcaccaaa caaattttct ctattatttg ggtaggcgtg actggttttc ttaagacttt 120
<210> 14
<211> 120
<212> DNA
<213> Homo sapiens
<400> 14
gaggggggac ccccgagtcg ccccctctcc tccccccgcc cccccccggc tccatcctcc 60
gccgccgccc gagcagctgc ggggccgcca ccgccgccgc cgccgttgca ggtaacagcc 120
<210> 15
<211> 120
<212> DNA
<213> Homo sapiens
<400> 15
ccggccggct ccctccctcc ctcccctgca gcccttcgct tgccctcccg ccggccgcac 60
cgggctccag gaggccagag gctctgtggg gtggggggag gacaggaggg gaggaggagg 120
<210> 16
<211> 120
<212> DNA
<213> Homo sapiens
<400> 16
tccctcttcc ccgaggtgca gggggtgggg tcggcttctg gactgctccg cgctctccgg 60
tccctacctc attgggcacc gcccacttcg tgggcttcca ggtgcgagcc ctcgcgccgg 120
<210> 17
<211> 120
<212> DNA
<213> Homo sapiens
<400> 17
cagaagttca gcaggcagac agtccgaagc cttcccgcag cggagagata gcttgagggt 60
gcgcaagacg gcagcctccg ccctcggttc ccgcccagac cgggcagaag agcttggagg 120
<210> 18
<211> 120
<212> DNA
<213> Homo sapiens
<400> 18
gaacgccctc agctgctgcc gccggggccg ctccagtgcc tgcgaactct gaggagccga 60
ggcgccggtg agagcaagga cgctgcaaac ttgcgcagcg cgggggctgg gattcacgcc 120
<210> 19
<211> 120
<212> DNA
<213> Homo sapiens
<400> 19
tgttcggagg gtcgcggggc accgaggtgc tttccggccg ccctctggtc ggccacccaa 60
agccgcgggc gctgatgatg ggtgaggagg gggcggcaag atttcgggcg cccctgccct 120
<210> 20
<211> 120
<212> DNA
<213> Homo sapiens
<400> 20
cccctccctg cgcgcgctcg cgcggctcag ccagctgcaa gtggcgggcg cccaggcaga 60
tgcgatccag cggctctggg ggcggcagcg gtggtagcag ctggtacctc ccgccgcctc 120
<210> 21
<211> 120
<212> DNA
<213> Homo sapiens
<400> 21
tgaacagttg tgtccagatt aagggagata atagctttcc caccctactt tgtgcaggtc 60
atacctcccc aaagtgttta cctaatcagt aggttcacaa actcttggtc attatagtat 120
<210> 22
<211> 120
<212> DNA
<213> Homo sapiens
<400> 22
atgcctaaaa tgtatgcact taggaatgct aaaaatttaa atatggtcta aagcaaataa 60
aagcaaagag gaaaaacttt ggacagcgta aagactagaa tagtctttta aaaagaaagc 120
<210> 23
<211> 120
<212> DNA
<213> Homo sapiens
<400> 23
cagtatattg gtttgaaata tagagatgtg tcccaatttc aagtatttta attgcacctt 60
aatgaaatta tctattttct atagatttta gtactattga atgtattact ttactgttac 120
<210> 24
<211> 120
<212> DNA
<213> Homo sapiens
<400> 24
ctgaatttat tataaagtgt ttttgaataa ataattctaa aagcatatac taagactcat 60
tcactttatt caaatatttg tgtgttctgt gtgccaggca tgggactcgt tctaaggaga 120
<210> 25
<211> 120
<212> DNA
<213> Homo sapiens
<400> 25
ctccgtgatg ttgcttgatt tcatccagca tatcatgaaa tcctccccac ttatgtttgt 60
aaatgtgagt ggaagccatg aggccaaagg cagttgtatt ggtaagtgct gttattcatg 120
<210> 26
<211> 120
<212> DNA
<213> Homo sapiens
<400> 26
tggcccacag tctggtttct taacaaaagg accattgttt aatttgtcat gactctttaa 60
aatgaatctt attgttttag ttgctgtaga acttgtaaag aaaactgact ctcagccaac 120
<210> 27
<211> 120
<212> DNA
<213> Homo sapiens
<400> 27
gtattttagt gccacaccag aggaatataa tacagttgta cagaagccaa gacaaattct 60
gtgtcaattc attgaccgga tacttacaga tgtaaatgtt ggtaagaaac caattatttc 120
<210> 28
<211> 120
<212> DNA
<213> Homo sapiens
<400> 28
agacgccggg aacccgcgtt ggcgtggttg actagtgcct cgcagcctca gcatggggga 60
acatggcctg gagctggctt ccatgatccc cgccctgcgg gagctgggca ggtagggcta 120
<210> 29
<211> 120
<212> DNA
<213> Homo sapiens
<400> 29
aaattaattt tcaatattga aggaaaaaag aaataagaag agagagagaa agaaagcatc 60
acacaaagat tttcttaaaa gaaacaattt tgcttgaaat ctctttagat ggggctcatt 120
<210> 30
<211> 120
<212> DNA
<213> Homo sapiens
<400> 30
tctcacggtg gcacttggcc tccactgggc agcaggacca gctccaagcg ctagtgttct 60
gttctctttt tgtaatcttg gaatcttttg ttgctctaaa tacaattaaa aatggcagaa 120
<210> 31
<211> 120
<212> DNA
<213> Homo sapiens
<400> 31
acttgtttgt tggactacat gtgtgacttt gggtctgtct ctgcctctgc tttcagaaat 60
gtcatccatt gtgtaaaata ttggcttact ggtctgccag ctaaaacttg gccacatccc 120
<210> 32
<211> 120
<212> DNA
<213> Homo sapiens
<400> 32
ctgttatggc tgcaggatcg agttattgtt aacaaagaga cccaagaaaa gctgctaatg 60
tcctcttatc attgttgtta atttgttaaa acataaagaa atctaaaatt tcagatgaat 120
<210> 33
<211> 120
<212> DNA
<213> Homo sapiens
<400> 33
gactcgatgg agcggggccc agcccttgga gcagccctca ggatctgtgc tgtggatggt 60
gagttgggcc aggctggatg gggggcacat ggggacgtgg gctccgggat tggggtgtgt 120
<210> 34
<211> 120
<212> DNA
<213> Homo sapiens
<400> 34
tgtaccctgt gtggccagtg ggatctggga ctgtggacca gccatttgct gacctccgtg 60
gtccccctgc ctggtctggc ctgttgtagg cagctgaggt gatccgtatg caggacccga 120
<210> 35
<211> 120
<212> DNA
<213> Homo sapiens
<400> 35
actgcctcaa gttccagcgg gaggagcggc ccctcttccc ccaggtgggc tgggtagggg 60
gctggacacc ttgggtgggt gactctggga tagaggaaga ctgagatgga ggcagatgtg 120
<210> 36
<211> 120
<212> DNA
<213> Homo sapiens
<400> 36
agcgcagccc gccttgtgcc ttaggccccg cccaagccac cagggagcca atctcagccc 60
tccacgccaa ggagccttgc ccaccagcca atcaatgttc gtctctgccc tgatgctgcc 120
<210> 37
<211> 120
<212> DNA
<213> Homo sapiens
<400> 37
tcactggaga ggcctgtgca gtagagtgta gaccctttca tgtactgtac tgtacacctg 60
atactgtaaa catactgtaa taataatgtc tcacatggaa acagaaaacg ctgggtcagc 120
<210> 38
<211> 120
<212> DNA
<213> Homo sapiens
<400> 38
agcaagctgt agtttttaaa aatgttttta gttaaacgtt gaggagaaaa aaaaaaaagg 60
cttttccccc aaagtatcat gtgtgaacct acaacaccct gacctctttc tctcctcctt 120
<210> 39
<211> 120
<212> DNA
<213> Homo sapiens
<400> 39
gattgtatga ataaccctga gatcacctct tagaactggt tttaaccttt agctgcagcg 60
gctacgctgc cacgtgtgta tatatatgac gttgtacatt gcacataccc ttggatcccc 120
<210> 40
<211> 120
<212> DNA
<213> Homo sapiens
<400> 40
acagtttggt cctcctccca gctacccctt tatagtatga cgagttaaca agttggtgac 60
ctgcacaaag cgagacacag ctatttaatc tcttgccaga tatcgcccct cttggtgcga 120
<210> 41
<211> 120
<212> DNA
<213> Homo sapiens
<400> 41
gggttataat aatgttaaca tggacatgat cttctttata attctacttt gagtgctgtc 60
tccatgtttg atgtatctga gcaggttgct ccacaggtag ctctaggagg gctggcaact 120
<210> 42
<211> 120
<212> DNA
<213> Homo sapiens
<400> 42
tagaggtggg gagcagagaa ttctcttatc caacatcaac atcttggtca gatttgaact 60
cttcaatctc ttgcactcaa agcttgttaa gatagttaag cgtgcataag ttaacttcca 120
<210> 43
<211> 120
<212> DNA
<213> Homo sapiens
<400> 43
atttacatac tctgcttaga atttggggga aaatttagaa atataattga caggattatt 60
ggaaatttgt tataatgaat gaaacatttt gtcatataag attcatattt acttcttata 120
<210> 44
<211> 120
<212> DNA
<213> Homo sapiens
<400> 44
catttgataa agtaaggcat ggttgtggtt aatctggttt atttttgttc cacaagttaa 60
ataaatcata aaacttgatg tgttatctct tatatctcac tcccactatt acccctttat 120
<210> 45
<211> 120
<212> DNA
<213> Homo sapiens
<400> 45
ctactgcttt cctttcctca tcgcaggtgt caagggggtg caagtggagg agatctacga 60
ccttcagagc aaatgtcagg ggtgagtggc tgtacaccag ggctgcccct tacacccaga 120
<210> 46
<211> 120
<212> DNA
<213> Homo sapiens
<400> 46
ccgggacgcg cctgcctgac catcaccccc tcctcttgtc gccccaccca ggcctcttca 60
ccctgctcgt ggaagatttc ggtaagagcc ttttctccct gccggaccgg ggctgtggcg 120
<210> 47
<211> 120
<212> DNA
<213> Homo sapiens
<400> 47
cggtgggggc agcggtgggg agggagggcc tggacatggc gctgaggggc cgccccgcgg 60
gaagatgaat aagggctggc tggagctgga gagcgaccca ggtgaggagg ggaccgggag 120
<210> 48
<211> 120
<212> DNA
<213> Homo sapiens
<400> 48
ccagaggcgg agcagggccg tcgcgccttg gtgacgtctg ccgccggcgc gggcgggtga 60
cgcgactggg cccgttgtct gtgtgtggga ctgaggggcc ccgggggcgg tgggggctcc 120
<210> 49
<211> 120
<212> DNA
<213> Homo sapiens
<400> 49
gattgtttta atttcttcaa acagtactaa cattctgaga gagcctgtgt gtttaggagg 60
atgtgagcac atcttctgta ggtaagtaat tacggtttga tgtatatagt acaactgtat 120
<210> 50
<211> 120
<212> DNA
<213> Homo sapiens
<400> 50
ggtcgcggtg cctgggccca cagtcgcgcc gcgctcgacc gcctggagaa gctgctgcgc 60
tgctcgcgtt ggtaaagacg gagcttcttg ggggtggctg cgagggcacg ggtcgcacag 120
<210> 51
<211> 120
<212> DNA
<213> Homo sapiens
<400> 51
tctgcgagga gcctttcatc cgaaggcggg acgatgccgg ataatcggca gccgaggaac 60
cggcagccga ggatccgctc cgggaacgag cctcgttccg cgcccgccat ggaaccggat 120
<210> 52
<211> 120
<212> DNA
<213> Homo sapiens
<400> 52
ctccccgcgc gccccgcccc tctggcggcc cgccgtccca gacgcgggaa gagcttggcc 60
ggtttcgagt cgctggcctg cagcttccct gtggtttccc gaggcttcct tgcttcccgc 120
<210> 53
<211> 120
<212> DNA
<213> Homo sapiens
<400> 53
gttggtccga gaaggtcacg attggctgaa gtatccagct ctgcatctct gtggggtggg 60
ggcggcggcg gcctcgacgt ggaggatata ggttagttgc tggggctgag acaacagccc 120
<210> 54
<211> 120
<212> DNA
<213> Homo sapiens
<400> 54
ctccgcctcc gcctccgcct cccccagctc tccgcctccc ttccccctcc ccgcccgaca 60
gcggccgctc gggccccggc tctcggttat aagatggcgg cgctgagcgg tggcggtggt 120
<210> 55
<211> 120
<212> DNA
<213> Homo sapiens
<400> 55
cctcaggctc ggctgcgccc ggggccgcgg gccggtacct gaggtggccc aggcgccctc 60
cgcccgcggc gccgcccggg ccgctcctcc ccgcgccccc cgcgcccccc gctcctccgc 120
<210> 56
<211> 120
<212> DNA
<213> Homo sapiens
<400> 56
ccggggtgac gtcacgaccg tgacacgcgg gtgacgccgt tgccgcggcg acttctcgtc 60
gtctccgccc ccttcccccg ctcccccccg cacccccgcc tagcgtcctt cccccaatcc 120
<210> 57
<211> 120
<212> DNA
<213> Homo sapiens
<400> 57
agcatacata gggtttctct tggtttcttt gattataatt catacatttt tctctaactg 60
caaacataat gttttccctt gtattttaca gatgcaaaca gctataattt tgcaaaaaag 120
<210> 58
<211> 120
<212> DNA
<213> Homo sapiens
<400> 58
aggagcctac aagaaagtac gagatttagt caacttgttg aagagctatt gaaaatcatt 60
tgtgcttttc agcttgacac aggtttggag tgtaagtgtt gaatatccca agaatgacac 120
<210> 59
<211> 120
<212> DNA
<213> Homo sapiens
<400> 59
ttataattta tagattttgc atgctgaaac ttctcaacca gaagaaaggg ccttcacagt 60
gtcctttatg taagaatgat ataaccaaaa ggtatataat ttggtaatga tgctaggttg 120
<210> 60
<211> 120
<212> DNA
<213> Homo sapiens
<400> 60
tctttttctc cccccctacc ctgctagtct ggagttgatc aaggaacctg tctccacaaa 60
gtgtgaccac atattttgca agtaagtttg aatgtgttat gtggctccat tattagcttt 120
<210> 61
<211> 120
<212> DNA
<213> Homo sapiens
<400> 61
tcagcatgat tataagaaaa atagaaccct cagtgtaact ctaattcctt tttactattc 60
cagtgtgatc tctgaaatta aattacttca actaaaaatt caaatacttt aaatcagaag 120
<210> 62
<211> 120
<212> DNA
<213> Homo sapiens
<400> 62
atttcatagt taatttattt tttttttcaa caaaatggtc atccaaactc aaacttgaga 60
aaatatcttg ctttcaaatt ggcactgatt ctgcctgctt tatttttagc gctatcacag 120
<210> 63
<211> 120
<212> DNA
<213> Homo sapiens
<400> 63
ggcgtgagcc actgtgcccg gccaatattt gttactttct taggtttaat agagaaaagg 60
gataaaacat ttctaactgg gagttaattg catggagaag gtcttaaatc agatgtttta 120
<210> 64
<211> 120
<212> DNA
<213> Homo sapiens
<400> 64
atgccttaaa tgtctgtata atatcatgtt ttcaaatcta attataaata cgtttaaagc 60
caagaataaa tcttttaaaa aattgacttg tttccttcca taactctgag ccatgatttt 120
<210> 65
<211> 120
<212> DNA
<213> Homo sapiens
<400> 65
acttttatta attccagttt ctgtttccag atttctccct tagttttggt tctctggttt 60
tctttgtaag gcgtgtctca atatttgaca ttttcatttc tgttgtagtt aggaatctga 120
<210> 66
<211> 120
<212> DNA
<213> Homo sapiens
<400> 66
ccctttcttc tcttccaggg ctccgcttta tttgctctca gaagtcggtt tcctttcctt 60
ttcttcagtg aatcggagct cagagcgttg cttcggtttc cctccagaca ggcaagtcgg 120
<210> 67
<211> 120
<212> DNA
<213> Homo sapiens
<400> 67
ctcgggttgt gtggttgagg ggtctggtgg gtcgaggaaa ggtaacggcg gccccagtcc 60
tgcacacaag gccggggaag tagcagcacc cccaggaaga gggaggagga agggctcgtg 120
<210> 68
<211> 120
<212> DNA
<213> Homo sapiens
<400> 68
aagttctcgc cccctcacct cgcaccggga ctggttgatt cctggccttg gcgggtgatt 60
ggtcgagctc gctgggctat tgggcgctgg gagtcgaggg ggcgggaggc gggaattcgt 120
<210> 69
<211> 120
<212> DNA
<213> Homo sapiens
<400> 69
taaacagggc ttcctgctca tgaaatggat acaaggaatg aagacaggag aaaataagaa 60
caatacttag gtttttttat aaagtggata gatgatgatg ccatatatgg attttcagac 120
<210> 70
<211> 120
<212> DNA
<213> Homo sapiens
<400> 70
atccctttac tgaaagtctt agcattatat ctattagtat tccacattta agtacataat 60
ttaaaagtaa tttaaagtca tctctttgaa ggatattaac aaattacaat gcaaatgcta 120
<210> 71
<211> 120
<212> DNA
<213> Homo sapiens
<400> 71
cagaattttt agaatcctaa caactattag gcagtgataa gaaaaatcca tttggcttaa 60
agtaaacttt aataagtgcc tagtattgca gatgcagttt atggtgaact tagaggatta 120
<210> 72
<211> 120
<212> DNA
<213> Homo sapiens
<400> 72
agaacatttt cattaatcac aaaagaaatc ctgaaatgaa accaccacca ccatcgctcc 60
agccctgggt ggccactcct ctactttctg cctcttatgg atgtgccata agaaatgtgg 120
<210> 73
<211> 120
<212> DNA
<213> Homo sapiens
<400> 73
gtgtcggtgc ctatgggaca gtgtacaagg cccgtgatcc ccacagtggc cactttgtgg 60
ccctcaagag tgtgagagtc cccaatggag gaggaggtgg aggaggcctt cccatcagca 120
<210> 74
<211> 120
<212> DNA
<213> Homo sapiens
<400> 74
gctgcaggct cataccatcc taactctgta agcgactttt ggtgatagga gtctgtgatt 60
gtagggtctc ccttgatctg agaatggcta cctctcgata tgagccagtg gctgaaattg 120
<210> 75
<211> 120
<212> DNA
<213> Homo sapiens
<400> 75
aggaaccggc tccggggccc cgataacggg ccgcccccac agcaccccgg gctggcgtga 60
ggtaagtgca gtcccttccc aggaatgaga accagtgccc gcccccctca cagctttcca 120
<210> 76
<211> 120
<212> DNA
<213> Homo sapiens
<400> 76
tggcagctgg tcacatggtg agggtggggg tgagggggcc tctctagctt gcggcctgtg 60
tctatggtcg ggccctctgc gtccagctgc tccggaccga gctcgggtgt atggggccgt 120
<210> 77
<211> 120
<212> DNA
<213> Homo sapiens
<400> 77
ggaagaggag ggatcggctc gctcctccgg cggcggcggc ggcggcgact ctgcaggcgg 60
agtttcgcgg cggcggcacc agggttacgc cagccccgcg gggaggtctc tccatccagc 120
<210> 78
<211> 120
<212> DNA
<213> Homo sapiens
<400> 78
ctgattgcac tttcttctta tcctcccgtc tcctccttta ggtgcaatga ttctggactg 60
agacgcgctt gggcagaggc tatgtaatcg tgtctgtgtt gaggacttcg cttcgaggag 120
<210> 79
<211> 120
<212> DNA
<213> Homo sapiens
<400> 79
gctcggcacg ccccctcccg ttccactgcg tcccgcgccg ctcgctcatc cccgaggggc 60
ccctgcaacc tctccgcgcg aagacggctt cagccctgca gggaaagaaa agtaacttcg 120
<210> 80
<211> 120
<212> DNA
<213> Homo sapiens
<400> 80
ccagagtctg attacctgct ccgcgaggcc gcggacacgt gcggagagcc gactgacact 60
cgcagccccc tcgggaggcc cgacgcgact gggcccctca ggtgaggagc tgtgcgctcg 120
<210> 81
<211> 120
<212> DNA
<213> Homo sapiens
<400> 81
ttgaaagcaa catcaaatct atacgtttaa agcagggcag ttagcacaaa tttgcaagta 60
gaacttctat tagcttatgc catagacatc acccaaccac ttgtatgtgt gtgtgtatat 120
<210> 82
<211> 120
<212> DNA
<213> Homo sapiens
<400> 82
ataatatgca tatatagtta ccgtgctaaa atggttacca gcaggttttg agagagaatg 60
ctgcatcaga aaagtgtcag ttgccacctc attctccctg atttaggttc ctgacactga 120
<210> 83
<211> 120
<212> DNA
<213> Homo sapiens
<400> 83
ttcctttctc tctcgttttt gacccccatt gggtgtatct tgtctatgta cagatatttt 60
gtaatatatt aaattttttt ctttcagttt ataaaaatgg aaagtggaga ttggaaaatt 120
<210> 84
<211> 120
<212> DNA
<213> Homo sapiens
<400> 84
aaatatttcc tgttactata ccacttttgc tccattgcat ttacttctta atctgtaccc 60
cctgagcata tctaatcatg tataaaggac gtttttcctc cactttatct taggggttct 120
<210> 85
<211> 120
<212> DNA
<213> Homo sapiens
<400> 85
ctcctgattg gcggatagag caatgagatg acctcgcttt cctttcttcc tttttcattt 60
ttaaataatc tagtttgaag aatggaagac tttcgacgag gggagccagg aataaaataa 120
<210> 86
<211> 120
<212> DNA
<213> Homo sapiens
<400> 86
cagcgccgcg ccgtgtccag atgtcgcgtc agaggcgtgc agcggtttag tttaatttcg 60
cttgttttcc aaatctagaa gaggagcgga gcggctttta gttcaaaact gacattcagc 120
<210> 87
<211> 120
<212> DNA
<213> Homo sapiens
<400> 87
gcgccctcgg cgacgcgggc agctgggagg ggaatgggcg cccggaccca gctgggaccc 60
ccgggtgcga ctccacctac ctagtccggc gccaggccgg gtcgacagct ccggcagcgc 120
<210> 88
<211> 120
<212> DNA
<213> Homo sapiens
<400> 88
gggagcgcgg gggaagagga aagaggaaga agcgctcaga tgctccgcgg ctgtcgtgaa 60
ggttaaaacc gaaaataaaa atgggctaga cacaaaggac tcggtgcttg tcccagccag 120
<210> 89
<211> 120
<212> DNA
<213> Homo sapiens
<400> 89
ggtgggaaaa tttcaagttt catatttgga ttagctctga catttattta tctgaacact 60
ggtaattgcc tcagtaaaga cactgataat aagtaccttt tagagttatt ttaatcttta 120
<210> 90
<211> 120
<212> DNA
<213> Homo sapiens
<400> 90
atgctttaat gtgtaggaag agtatagtgt cctgttttgc acagaaaggc attctgtaaa 60
taataagttg ccttaatttt cctgtaatgt tcattatatt gttgtgggaa ggtatttact 120
<210> 91
<211> 120
<212> DNA
<213> Homo sapiens
<400> 91
cctattatta aaaataaaaa tgtgtaaaat ttactacctg aagataacag ttcaaatttt 60
gatggaaaaa tcaacctatg cttgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtaatgtgt 120
<210> 92
<211> 120
<212> DNA
<213> Homo sapiens
<400> 92
tgagccacct cgcctggcaa gggattctgt tcttagtcct tgaaaaaata aagttctgaa 60
tcttcaagtt ccttgattct ttcctgggcc cctgtcattc caactgcccc ctaccagaag 120
<210> 93
<211> 120
<212> DNA
<213> Homo sapiens
<400> 93
gaccaagaac ctgaggacca agaacctgag gagcctaccc ctgccccctg ggctcgatta 60
tgggcccttc aggatggatt tgccaatctt ggtaagaccc tttgttgtat agtatcacgt 120
<210> 94
<211> 120
<212> DNA
<213> Homo sapiens
<400> 94
ggcatatcca gctcctctac cagcacgatg ccaaactcca gccagtcctc tcactccagc 60
tctgggacac tgagctcctt agagacagtg tccactcagg aactctattc tattcctgag 120
<210> 95
<211> 120
<212> DNA
<213> Homo sapiens
<400> 95
tttgaggtcg tgatgtctcg ggagtcggat gttgaggctc agcagtctca tggcagcagt 60
gcctgttcac agccccatgg cagcgttacc cagtcccaag gctcctcctc acagtcccag 120
<210> 96
<211> 120
<212> DNA
<213> Homo sapiens
<400> 96
ggcaggggag ggggttttga ttggctgagg gtggagtttg tatctgcagg tttagcgcca 60
ctctgctggc tgaggctgcg gagagtgtgc ggctccaggt gggctcacgc ggtgagtcat 120
<210> 97
<211> 120
<212> DNA
<213> Homo sapiens
<400> 97
agtgactcaa gaagtgaaga atgcacaaga atggatcaca agatggaatt tatcaaaccc 60
tagccttgct tgttaaattt tttttttttt ttttttaaga atatctgtaa tggtactgac 120
<210> 98
<211> 120
<212> DNA
<213> Homo sapiens
<400> 98
tttgcttgct ttgaagtagc tctttttttt tttttttttt tttttttgca gtaactgttt 60
tttaagtctc tcgtagtgtt aagttatagt gaatactgct acagcaattt ctaattttta 120
<210> 99
<211> 120
<212> DNA
<213> Homo sapiens
<400> 99
agaattgagt aatggtgtag aacactaatt cataatcact ctaattaatt gtaatctgaa 60
taaagtgtaa caattgtgta gcctttttgt ataaaataga caaatagaaa atggtccaat 120
<210> 100
<211> 120
<212> DNA
<213> Homo sapiens
<400> 100
ttttggacag tttaccagtt gccttttatc ccaaagttgt tgtaacctgc tgtgatacga 60
tgcttcaaga gaaaatgcgg ttataaaaaa tggttcagaa ttaaactttt aattcattcg 120
<210> 101
<211> 120
<212> DNA
<213> Homo sapiens
<400> 101
aatctgtgca tacatttctg gatgcattta cttatcttta aaaaaaaagg aatcctatga 60
cctgatttgg ccacaaaaat aatcttgctg tacaatacaa tctcttggaa attaagagat 120
<210> 102
<211> 120
<212> DNA
<213> Homo sapiens
<400> 102
cctatggatt tgatgactgg tattagaggt gacaatgtaa ccgattaaca acagacagca 60
ataacttcgt tttagaaaca ttcaagcaat agctttatag cttcaacata tggtacgttt 120
<210> 103
<211> 120
<212> DNA
<213> Homo sapiens
<400> 103
taaccttgaa agttttgcaa tgatgaaagc agtatttgta caaatgaaaa gcagaattct 60
cttttatatg gtttatactg ttgatcagaa atgttgattg tgcattgagt attaaaaaat 120
<210> 104
<211> 120
<212> DNA
<213> Homo sapiens
<400> 104
tagatgtata ttattcattg ttctttactc ctgagtacct tataataata ataatgtatt 60
ctttgttaac aatgccatgt tggtactagt tattaatcat atctaaccaa ctgtaggtgt 120
<210> 105
<211> 120
<212> DNA
<213> Homo sapiens
<400> 105
actttatagc tggatcatca ttgaactaaa acacaaagca agagaaaaac cttatgatag 60
taaaagtttg cggacgtaag tgcaattaaa tgcatcatat tcttgcacag ttggtggctc 120
<210> 106
<211> 120
<212> DNA
<213> Homo sapiens
<400> 106
tctttacagt gcacttcaga aggagatcac aacgcgttat caactggatc caaaatttat 60
cacgagtatt ttggtatgat tttttaataa gtgagcttta gcagacagtt ggtgagacag 120
<210> 107
<211> 120
<212> DNA
<213> Homo sapiens
<400> 107
tttccccagt atgagaataa tgttatcact attgatctgg ttcaaaattc ttctcaaaaa 60
actcagaatg atgtggacat agctgatgtg gcttattatt ttgaaaaaga tgtgagtatc 120
<210> 108
<211> 120
<212> DNA
<213> Homo sapiens
<400> 108
ttgtctttct tccactcagg ttatttccag aaagaagaga atggcaaagt atgagaaggc 60
tgaggtaaat ggattactta cctaaataga aaggccctgt tgaatctctt actcctaatc 120
<210> 109
<211> 120
<212> DNA
<213> Homo sapiens
<400> 109
ctcgttggaa gaggaacagc actggggagt ctttgtggat tctgaggccc tgcccaatga 60
gactctaggg tccagtggat gccacagccc agcttggccc tttccttcca gatcctgggt 120
<210> 110
<211> 120
<212> DNA
<213> Homo sapiens
<400> 110
actgaaagcc ttagggaagc tggcctgaga ggggaagcgg ccctaaggga gtgtctaaga 60
acaaaagcga cccattcaga gactgtccct gaaacctagt actgcccccc atgaggaagg 120
<210> 111
<211> 120
<212> DNA
<213> Homo sapiens
<400> 111
aacagcaatg gtgtcagtat ccaggctttg tacagagtgc ttttctgttt agtttttact 60
ttttttgttt tgttttttta aagatgaaat aaagacccag ggggagaatg ggtgttgtat 120
<210> 112
<211> 120
<212> DNA
<213> Homo sapiens
<400> 112
ggggaggcaa gtgtgggggg tccttctcca cacccacttt gtccatttgc aaatatattt 60
tggaaaacag ctaggcaccg gcctatgtct gggggtggct ctgtgccatc ccttcctgct 120
<210> 113
<211> 120
<212> DNA
<213> Homo sapiens
<400> 113
gaaacaatgc ggagagcaga tagacgcaat atttgggaac caaagagtga ctgctgttgg 60
cgttgcatca taacataagc gctttccccc ttctcgtcac tatcatttgt atcaaccaaa 120
<210> 114
<211> 120
<212> DNA
<213> Homo sapiens
<400> 114
gaactgatct ctggtatcct cgaaggaatg ctgtggggat attcttcatc tctgttcatg 60
gtacatcagc aatttgtggg gaaaagatgg actatataac acaatgatct gcctaaaaga 120
<210> 115
<211> 120
<212> DNA
<213> Homo sapiens
<400> 115
aactgtctct acttataggg ggctgagcaa accttagagc atctgcggat gctcgtcatt 60
atcttcaaaa gtccccaaga gtttttctcc atactttatt attgctattt tgtttaggct 120
<210> 116
<211> 120
<212> DNA
<213> Homo sapiens
<400> 116
agaaaaaaaa aaactcataa aattgtcttc aaaccaaacc aaaggaaatg aaaagaaaaa 60
aaaaaacagt acagggaggt ctaaaaccag agaacatatg aaaatacgtt ctgcctgact 120
<210> 117
<211> 120
<212> DNA
<213> Homo sapiens
<400> 117
aagagtaatt aactgttaaa tgttacagac tgatcaaata aaatgaagac tgagaatggc 60
ctgtttgtaa ggtaataaaa atacataaaa tcttatgata gaaatattta tacataaagt 120
<210> 118
<211> 120
<212> DNA
<213> Homo sapiens
<400> 118
ttcaaggaga tgagaaggaa acaggaggga agattgaaaa gaagagtcca gtgtgttatg 60
aggaaaaccc caagagcatg ctgccttaca agacaggtga aaaatgtgtt ctgtgaaaga 120
<210> 119
<211> 120
<212> DNA
<213> Homo sapiens
<400> 119
tagacatcca agtggagata tggcatttaa attcatgaga ttggatgaga tcccaccaaa 60
ggaacaggtt taggtggaga caaccaaata ccgatgccta ggacactgca gtgtttagaa 120
<210> 120
<211> 120
<212> DNA
<213> Homo sapiens
<400> 120
tcgcgggggg tggacggggc ggtctgcggg gagggggggc ggtctgcggg gagggggacg 60
gggcggcctc gcgggaggga ggacagtttc gcgggttcgg gcggcgagtc tcccggatgc 120
<210> 121
<211> 120
<212> DNA
<213> Homo sapiens
<400> 121
ggttttagat tttgtctcat gtgttaagag aaagctatgg ttttgttttg tgtttaaggc 60
tctgctttgc aggatcaagc ctcaaggctg ggggttcccg tgggtattct ctcagccggg 120
<210> 122
<211> 120
<212> DNA
<213> Homo sapiens
<400> 122
attctaggta gaaggtccac tgtgtaaaaa attgtctctc agcaaagtga ttgactgtga 60
cagttctgag gcctatgcta atcattctag ttcatttata ggtaagttat agcttcattt 120
<210> 123
<211> 120
<212> DNA
<213> Homo sapiens
<400> 123
gcgggaaggg tcaagaggga aaaatataat cctgaaaggg cacagaaatt aaaggaatca 60
gctgtgcgcc tcctgcgaag ccatcaggac ctgaatgccc ttttgcttga ggtaagagga 120
<210> 124
<211> 120
<212> DNA
<213> Homo sapiens
<400> 124
gagccgccgc cggggctgta ggcgccaagg ccatgtccga ctcgtgggtc ccgaactccg 60
cctcgggcca ggacccaggg ggccgccgga gggcctgggc cgagctgctg ggtaggtggg 120
<210> 125
<211> 120
<212> DNA
<213> Homo sapiens
<400> 125
tgttggcgtt ttggttcttt ttgttcattg agcgcaggca gctatgtctt cttcaaagga 60
gaggagcaaa ggtgaatttc tctgcctcgg actcgtggga gccgtgaaaa gctcgcccct 120
<210> 126
<211> 120
<212> DNA
<213> Homo sapiens
<400> 126
gggaggcgga aggtggcggg cggtgccagc ccgcggggcg gggccagggc ggggaaagcg 60
ggggcgggag ccggcgctgg ggtcgcgcgg aagggagccc ccggagaggc gggagccggg 120
<210> 127
<211> 120
<212> DNA
<213> Homo sapiens
<400> 127
aaagccaaat tttcaagcca cagatcccgg gcggtggctt cctttccgcc actgcccaaa 60
ctgctgaagc agctcccgcg aggaccaccc ggtaagcggc aggccgcaga acgcagcgag 120
<210> 128
<211> 120
<212> DNA
<213> Homo sapiens
<400> 128
agcgcgcggg gccgctagcc aggccccaga atgcactgct gacacgtgtg cgcgcgcgcg 60
gctccactgc cgggcgaccg cgggaaaatt ccaaaaaaac tcaaaaagcc aatacgaggc 120
<210> 129
<211> 120
<212> DNA
<213> Homo sapiens
<400> 129
ccagcctgtg atcattttgt gttagagttt gaaatccgct gtttgccttt cttactggta 60
ggatcctttt ttgttcctct tttttttttt tttttttttt ttttaaagac ggggactcgc 120
<210> 130
<211> 120
<212> DNA
<213> Homo sapiens
<400> 130
aggcatgagc caccgctccc agccatattt tgttcttaaa gtggggtctt tattaacttg 60
tggacatcat ggattgtcta acaccatcac agtccctggc tcaggattct aatgtagcat 120
<210> 131
<211> 120
<212> DNA
<213> Homo sapiens
<400> 131
tatttattgg tttggataaa cccagctgtg ctacactgca gagtaaaatc tctgagtcat 60
gattctggac tttgggagct agttttgaaa ctctgattta ttgtagaact taggcttgta 120
<210> 132
<211> 120
<212> DNA
<213> Homo sapiens
<400> 132
ccaattttac aaataaattc tgttctaagt tctgcctcag ttgcctcatt tatctttctg 60
gatttgcttc attattcaag gattaggtgg aattgaattg agatttgtgc agagaaatta 120
<210> 133
<211> 120
<212> DNA
<213> Homo sapiens
<400> 133
agcgcttcac ctgaaagata gtgcaaattg gttaggatgc cacctcaaga actgtaactg 60
agagctcaga agtgagcaaa ggagcttaat gctaaggtca aaaggagagt gaaaggttga 120
<210> 134
<211> 120
<212> DNA
<213> Homo sapiens
<400> 134
gaacaattgc cacgaacggt aatgttacat gttaggaggg tctgttttct ttttatataa 60
gtgtgtctta gatatatttt aaatagaaaa taagctttct gatttacttg tttggtattt 120
<210> 135
<211> 120
<212> DNA
<213> Homo sapiens
<400> 135
aaagcacagt ttgtttttct gtcacctata gagtgcaaga atgcactcta tagaataaat 60
tatctttaaa catttcttct gtggttgaag taggggacag gtacaggtag aatatttgaa 120
<210> 136
<211> 120
<212> DNA
<213> Homo sapiens
<400> 136
gctctgctgc cttcatttct gaaacatcat atcacattca ctctggacac agggcacctt 60
ataaactgaa attagcctag aatatagcct gagtcaagag tggattctct ggggccccaa 120
<210> 137
<211> 120
<212> DNA
<213> Homo sapiens
<400> 137
ttgtctcatt aaaattttag attattatgt agttggcagc tgagaacaat acttagtgga 60
taccatcgaa tagtacaaca ggtaagtcct ttttaaaagg tttatgtttt cagtgaagat 120
<210> 138
<211> 120
<212> DNA
<213> Homo sapiens
<400> 138
atttgagtga tccttttcaa tattttccac agggaagaga cttccacctt aggatagtgt 60
tgcctgaaga tttacaactg aagaatgcaa ggtgatatgg tgtttagtta taaacgtgca 120
<210> 139
<211> 120
<212> DNA
<213> Homo sapiens
<400> 139
gagccatggc ggtgacggaa gcgagcctgt tgcgccagtg ccccctgctt ctgccccaga 60
accggtcgaa aaccgtgtat gagggattca tctcggctca ggtacccgcc cagtggttgc 120
<210> 140
<211> 120
<212> DNA
<213> Homo sapiens
<400> 140
aatcctccag gatcttcccg ccaaggctgg ggtttccgct ccgcggcgtc cgagcgccag 60
cggactgcgc atgtgcagga cccagcaggt ctagagcttt tctgtgtttc tccggacttc 120
<210> 141
<211> 120
<212> DNA
<213> Homo sapiens
<400> 141
gctctccagc tgcttcctgc gcatccgtgc cgacggcgtc gtggactgcg cgcggggcca 60
gagcgcgcac agtgagtgcc cgccagcacc cccgcccgcc ccgccgcgcg caccccaccc 120
<210> 142
<211> 120
<212> DNA
<213> Homo sapiens
<400> 142
cggcctctgg ctggccgtgg ccgggcgccc cctcgccttc tcggacgcgg ggccccacgt 60
gcactacggc tggggcgacc ccatccgcct gcggcacctg tacacctccg gcccccacgg 120
<210> 143
<211> 120
<212> DNA
<213> Homo sapiens
<400> 143
cccgcagcgc atcccggtcg ccgcccagcc tcccgcaccc ccatcgccgg agctgcgccg 60
agagccccag ggaggtgcca tgcggagcgg gtgtgtggtg gtccacgtat ggatcctggc 120
<210> 144
<211> 120
<212> DNA
<213> Homo sapiens
<400> 144
ccgtggggcc cgtaaggcgc tactatataa ggctgccggc ccggagccgc cgcgccgtca 60
gagcaggagc gctgcgtcca ggatctaggg ccacgaccat cccaacccgg cactcacagc 120
<210> 145
<211> 120
<212> DNA
<213> Homo sapiens
<400> 145
ggtctgcaag gaaagtgagg cgccgccgct gcgttctgga ggaggggggc acaaggtctg 60
gagaccccgg gtggcggacg ggagccctcc ccccgccccg cctccggggc accagctccg 120
<210> 146
<211> 120
<212> DNA
<213> Homo sapiens
<400> 146
agccgcggaa cccaaggact tttctccggt ccgagctcgg ggcgccccgc agggcgcacg 60
gtacccgtgc tgcagtcggg cacgccgcgg cgccggggcc tccgcagggc gatggagccc 120
<210> 147
<211> 120
<212> DNA
<213> Homo sapiens
<400> 147
gcgcggagga acccgggtgt gccgggagct gggcggccac gtccggacgg gaccgagacc 60
cctcgtagcg cattgcggcg acctcgcctt ccccggccgc gagcgcgccg ctgcttgaaa 120
<210> 148
<211> 120
<212> DNA
<213> Homo sapiens
<400> 148
agagcgagcc ctcgcgcccc gccggcgcat agcgctcgga gcgctcttgc ggccacaggc 60
gcggcgtcct cggcggcggg cggcagctag cgggagccgg gacgccggtg cagccgcagc 120
<210> 149
<211> 120
<212> DNA
<213> Homo sapiens
<400> 149
catcccgacc cacgcggggc gcggggacaa cacaggtcgc ggaggagcgt tgccattcaa 60
ggtaatcgcc gcgcaagacg cctcggggag cttcgccagc cggggacgtg ggcgccacgg 120
<210> 150
<211> 120
<212> DNA
<213> Homo sapiens
<400> 150
gcgctcctcc gcagcctggg gtacgcgtga agcccgggag gcttggcgcc ggcgaagacc 60
caaggaccac tcttctgcgt ttggagttgc tccccgcaac cccgggctcg tcgctttctc 120
<210> 151
<211> 120
<212> DNA
<213> Homo sapiens
<400> 151
tgcctgcgcg ctctgagcct tcgcaactcg cgagcaaagt ttggtggagg caacgccaag 60
cctgagtcct ttcttcctct cgttccccaa atccgagggc agcccgcggg cgtcatgccc 120
<210> 152
<211> 120
<212> DNA
<213> Homo sapiens
<400> 152
cggccgccac aaagctcggg cgccgcgggg ctgcatgcgg cgtacctggc ccggcgcggc 60
gactgctctc cgggctggcg ggggccggcc gcgagccccg ggggccccga ggccgcagct 120
<210> 153
<211> 120
<212> DNA
<213> Homo sapiens
<400> 153
gaggatcccc tccaagccta aaaggttgtt aatagttgga ggtgattcca gtgaagatat 60
tttatttcct ttgtcctttt tcaggagaat tagatttcta taggattttt ctttaggaga 120
<210> 154
<211> 120
<212> DNA
<213> Homo sapiens
<400> 154
tttatttttt ggacttcaaa gcaagctggt attttcatac aaattcttct aattgctgtg 60
tgtcccaggc agggagacgg tttccaggga ggggccggcc ctgtgtgcag gttccgatgt 120
<210> 155
<211> 120
<212> DNA
<213> Homo sapiens
<400> 155
tattagatgt tacaagttta tatatatcta tatatataat ttattgagtt tttacaagat 60
gtatttgttg tagacttaac acttcttacg caatgcttct agagttttat agcctggact 120
<210> 156
<211> 120
<212> DNA
<213> Homo sapiens
<400> 156
gctacctttc aaagcttgga gggaagccgt gaattcagtt ggttcgttct gtactgttac 60
tgggccctga gtctgggcag ctgtcccttg cttgcctgca gggccatggc tcagggtggt 120
<210> 157
<211> 120
<212> DNA
<213> Homo sapiens
<400> 157
gggccttggg gctcagccac agcctgacac agtgctcgac cttgatagca tggggcccct 60
ggcccagagt tgctgtgccg tgtccaaggg ccgtgccctt gcccttggag ctgccgtgcc 120
<210> 158
<211> 120
<212> DNA
<213> Homo sapiens
<400> 158
tgtgtcctga tggcccaaat gtcagggttc tgctcggctt cttggacctt ggcgcttagt 60
ccccatcccg ggtttggctg agcctggctg gagagctgct atgctaaacc tcctgcctcc 120
<210> 159
<211> 120
<212> DNA
<213> Homo sapiens
<400> 159
caataccagc aggaggttct gggcctctga accccctttc cccacacctc cccctgctgc 60
tgctgcccca gcgtcttgac gggagcattg gcccctgagc ccagagaagc tggaagcctg 120
<210> 160
<211> 120
<212> DNA
<213> Homo sapiens
<400> 160
ccgaaaacag gagcaaatgg cgttttataa attatttttt tgaaataaag ctctgtgtgc 60
ctgggtcttc cctgagcaac atggagtggg gtgaggtgga gggatccctc cagcagagtt 120
<210> 161
<211> 120
<212> DNA
<213> Homo sapiens
<400> 161
tcaggatcta gttcaggttc aaaattaaaa gatcctgaac tgagtttaaa aggcacccag 60
cacatcatgc aagcaggcca gacactgcat ctccaatgca ggtaagtggc tgtgttggtt 120
<210> 162
<211> 120
<212> DNA
<213> Homo sapiens
<400> 162
ccgcggggag cgcgggcacc gggcgagcag gccgcgtcgc gctcaccatg gtcagctact 60
gggacaccgg ggtcctgctg tgcgcgctgc tcagctgtct gcttctcaca ggtgaggcgc 120
<210> 163
<211> 120
<212> DNA
<213> Homo sapiens
<400> 163
tggcggcgag gattacccgg ggaagtggtt gtctcctggc tggagccgcg agacgggcgc 60
tcagggcgcg gggccggcgg cggcgaacga gaggacggac tctggcggcc gggtcgttgg 120
<210> 164
<211> 120
<212> DNA
<213> Homo sapiens
<400> 164
tcatcgaggt ccgcgggagg ctcggagcgc gccaggcgga cactcctctc ggctcctccc 60
cggcagcggc ggcggctcgg agcgggctcc ggggctcggg tgcagcggcc agcgggcgcc 120
<210> 165
<211> 120
<212> DNA
<213> Homo sapiens
<400> 165
catgggctgc cctggggccc acctgaccac tcctgtcctc tgccagggga cagcaccccc 60
tcgagtgggc ttggccagga gctcaggagg cgccagccac cggagacaag gacagcgagg 120
<210> 166
<211> 120
<212> DNA
<213> Homo sapiens
<400> 166
gtctcccacc ccaggcctgg tgagtggcta ctccatgacc cccccgacct tgaacatcac 60
ggaggagtca cacgtcatcg acaccggtga cagcctgtcc atctcctgca ggtactgggt 120
<210> 167
<211> 120
<212> DNA
<213> Homo sapiens
<400> 167
cgactgtggc tctgcctggg actcctggac ggtgagcgcg gcgaacgggc cacccgcccg 60
agcgtggggc tggccgggga gggggtaccg cgcacctggg gcgggcgctg agaccgctcc 120
<210> 168
<211> 120
<212> DNA
<213> Homo sapiens
<400> 168
ccccgccccg ccccaggcca gccggcgccc gcgcggacac tttcagcccc gagccgcggc 60
cgctcgggtc ggacccacgc gcagcggccg gagatgcagc ggggcgccgc gctgtgcctg 120
<210> 169
<211> 120
<212> DNA
<213> Homo sapiens
<400> 169
aagcaatgcc acccatgccc tggggtgccc caggggacgt ccccagctcc cgtgccttat 60
ggttactttg gaggcgggta ctactcctgc cgagtgtccc ggagctcgct gaaaccctgt 120
<210> 170
<211> 120
<212> DNA
<213> Homo sapiens
<400> 170
gcgggagggg ggcggaatct ggtcgcccac tcccctctga ccagccaccc agcggcgcct 60
acgctgatgc ctgctgtcaa ctatgccccc ttggatctgc caggctcggc ggagccgcca 120
<210> 171
<211> 120
<212> DNA
<213> Homo sapiens
<400> 171
gcgagctggg tgccccctag attccccgcc cccgcacctc atgagccgac cctcggctcc 60
atggagcccg gcaattatgc caccttggat ggagccaagg atatcgaagg cttgctggga 120
<210> 172
<211> 120
<212> DNA
<213> Homo sapiens
<400> 172
cgcgcgtgcc cgggcccctg cgtctcttgc gtcaagacgg ccgtgctgag cgaatgcagg 60
cgacttgcga gctgggagcg atttaaaacg ctttggattc ccccggcctg ggtggggaga 120
<210> 173
<211> 120
<212> DNA
<213> Homo sapiens
<400> 173
tgggcaagag tgcgctgacc atccagctga tccagaacca ttttgtggac gaatacgacc 60
ccactataga ggtgagcctg gcgccgccgt ccaggtgcca gcagctgctg cgggcgagcc 120
<210> 174
<211> 120
<212> DNA
<213> Homo sapiens
<400> 174
ctggctgagc agggccctcc ttggcaggtg gggcaggaga ccctgtagga ggaccccggg 60
ccgcaggccc ctgaggagcg atgacggaat ataagctggt ggtggtgggc gccggcggtg 120
<210> 175
<211> 120
<212> DNA
<213> Homo sapiens
<400> 175
ccccggcctc ggccccggcc ctggccccgg gggcagtcgc gcctgtgaac ggtgagtgcg 60
ggcagggatc ggccgggccg cgcgccctcc tcgcccccag gcggcagcaa tacgcgcggc 120
<210> 176
<211> 120
<212> DNA
<213> Homo sapiens
<400> 176
gggcgtgcgc aggcccgccc gagtctccgc cgcccgtgcc ctgcgcccgc aacccgagcc 60
gcacccgccg cggacggagc ccatgcgcgg ggcgaaccgc gcgcccccgc ccccgccccg 120
<210> 177
<211> 120
<212> DNA
<213> Homo sapiens
<400> 177
aaacaccccc gccagttccg ggtgcctgga gtttaaaagg tcccagcacc agcgagggga 60
ggggagggga ggggcgggcg tggagacctg gaaggaggta ccgatccagc cttgattgca 120
<210> 178
<211> 120
<212> DNA
<213> Homo sapiens
<400> 178
aggcggcgag gaatagcctt gaagccgatc cctcgcgtcc gccagggggc gtggaggggc 60
ggagctccag cggccttcag aggggtcgct aggccacacg gggcgagagg gggctggggg 120
<210> 179
<211> 120
<212> DNA
<213> Homo sapiens
<400> 179
gagtctgagc ttgtgagcgg ctgtggcgcc ccaactcttc gccagcatat catcccggca 60
ggtaacctca ggctccaagg ggcggccccg gtccctggct gtggaggggt ggctctaatt 120
<210> 180
<211> 120
<212> DNA
<213> Homo sapiens
<400> 180
ggggacaaag ccgggaagag gaaaagctcg gacctaccct gtggtcccgg gtttctgcag 60
agtctacttc agaagcggag gcactgggag tccggtttgg gattgccagg ctgtggttgt 120
<210> 181
<211> 120
<212> DNA
<213> Homo sapiens
<400> 181
tgcttctaga tgccgacaaa aggatcaagg tggcgaagcc cgtggtggag atggatggtg 60
atgagatgac ccgtattatc tggcagttca tcaaggagaa ggtagtgccc cctcctgaag 120
<210> 182
<211> 120
<212> DNA
<213> Homo sapiens
<400> 182
ccccgtgtct ttgctgcctg gtaattcctg cacgcatctt ttcctatttt gcaacgccat 60
aggcttccag cgactgctgg tgatgtttct ggtaagttag agcttggggc agtgcggacc 120
<210> 183
<211> 120
<212> DNA
<213> Homo sapiens
<400> 183
gcgggtcgtg cgctcgctct gcagagcctc aggctcgcgg ccggcctggg cgccggcggc 60
cctgacagcc cccacctcgc aagagcagcc gcggcgccac tgtgagtgcc gcgcggaggg 120
<210> 184
<211> 120
<212> DNA
<213> Homo sapiens
<400> 184
gcggccagcg cccgccaggc ccagcgttag cccgcggcca ggcagccggg aggagcggcg 60
cgcgctcgga cctctcccgc cctgctcgtt cgctctccag cttgggatgg ccggctacct 120
<210> 185
<211> 120
<212> DNA
<213> Homo sapiens
<400> 185
tgctccacta gctcctctcc tactgagctg gggtaagaag cggagcgtat acggaggagg 60
cgggatgcat ttctgcatcg agcgcacaaa ggtgtggcgg agggggctcc agagctggga 120
<210> 186
<211> 120
<212> DNA
<213> Homo sapiens
<400> 186
gcggcggtcc ggagagaggg cgagccccgc gcggcgccgg ggaccgggcg ctaccacgag 60
gccgggacgc tggagtctgg ggtaggaggg agaacgggca cggggcggga agaggggtcc 120
<210> 187
<211> 120
<212> DNA
<213> Homo sapiens
<400> 187
agagcctgga tgttgtttac atgaaggatc cggcgggagg agtctaagag gaggaggcgg 60
cggtgccgga ggaggaggag gagggaggga gaagagagga agaccggagt ccccgcggcg 120
<210> 188
<211> 120
<212> DNA
<213> Homo sapiens
<400> 188
cccccgccat ctatcacatg gcagagatag aataaaaaca gaaaaatggc gacggtcacg 60
ttgtggcgag ccttgctgcg tcattagata atcctcatgc aaatagcggg aagaacaaag 120
<210> 189
<211> 120
<212> DNA
<213> Homo sapiens
<400> 189
taatgtacta agaatcagtt tgctgtatat tagaataaat agtaacagta agtcagcagg 60
attatccaaa caaaagacta ggttttatga gataagcttg atttaagaaa aaaacaatta 120
<210> 190
<211> 120
<212> DNA
<213> Homo sapiens
<400> 190
aagtatgaat atcagaaata ctgtgtgttt actctcagat tttagttggt tggatttaat 60
atcaagataa ctagctgcta agcgtttcat aattctcaca gtgatattag atttcaaaat 120
<210> 191
<211> 120
<212> DNA
<213> Homo sapiens
<400> 191
gacactgaga gaactgaaaa actacatcag tcaaattcat gtatgtatat catatagcct 60
ttaacttttt acattaatca gattcttagt aaaatgcaga ctgtatacct aaatattaaa 120
<210> 192
<211> 120
<212> DNA
<213> Homo sapiens
<400> 192
atatttactt ttataatctt accttttatt tcaatataaa taaaattctt cttaggttaa 60
aaaattaatt tcagttgtgt ttatgccaga tggcattgct tagttggtgc aagctctcaa 120
<210> 193
<211> 120
<212> DNA
<213> Homo sapiens
<400> 193
cgccctgtgg ctctgcgtgg agacccgggc cgcctctgtg ggtaaggagc ccactctgga 60
ggaggaaggc agacaggtcg ggtgagggcg gagaggacct gaaagccaga tctaactcgg 120
<210> 194
<211> 120
<212> DNA
<213> Homo sapiens
<400> 194
cgagttccac ctccgcgcct ccttctctag acaggcgctg ggagaaagaa ccggctcccg 60
agttctgggc atttcgcccg gctcgaggtg caggatgcag agcaaggtgc tgctggccgt 120
<210> 195
<211> 120
<212> DNA
<213> Homo sapiens
<400> 195
agtccgtctg gcagcctgga tatcctctcc taccggcacc cgcagacgcc cctgcagccg 60
cggtcggcgc ccgggctccc tagccctgtg cgctcaactg tcctgcgctg cggggtgccg 120
<210> 196
<211> 120
<212> DNA
<213> Homo sapiens
<400> 196
ctctagagtt tcggcaccag ctcccaccct gcactgagtc ccgggacccc gggagagcgg 60
tcaatgtgtg gtcgctgcgt ttcctctgcc tgcgccgggc atcacttgcg cgccgcagaa 120
<210> 197
<211> 120
<212> DNA
<213> Homo sapiens
<400> 197
tgtgttgtca cccaagagat tgttgtttgc catactttgt ctgaaaaatt cctttgtgtt 60
tctattgact tcaatgatag taagaaaagt ggttgttagt tatagatgtc taggtacttc 120
<210> 198
<211> 120
<212> DNA
<213> Homo sapiens
<400> 198
aggggcactt cattgagagt tttgtcttgg atattcttga aagtttatat ttttataatt 60
ttttcttaca tcagatgttt ctttgcagtg gcttaatgtt tgaaattatt ttgtggcttt 120
<210> 199
<211> 120
<212> DNA
<213> Homo sapiens
<400> 199
ttttgtaaat attgaaatgt agcaataatg tcttttgaat attcccaagc ccatgagtcc 60
ttgaaaatat tttttatata tacagtaact ttatgtgtaa atacataagc ggcgtaagtt 120
<210> 200
<211> 120
<212> DNA
<213> Homo sapiens
<400> 200
taaaggatgt tggtgttcca cgtgttttat tcctgtatgt tgtccaattg ttgacagttc 60
tgaagaattc taataaaatg tacatatata aatcaagtgg agtcatttga ttgttgagat 120
<210> 201
<211> 120
<212> DNA
<213> Homo sapiens
<400> 201
gcaagaagtt atggaattcc ttttattgaa acatcagcaa agacaagaca ggtaagtaac 60
actgaaataa atacagatct gttttctgca aaatcataac tgttatgtca tttaatatat 120
<210> 202
<211> 120
<212> DNA
<213> Homo sapiens
<400> 202
ttgatagtgt attaacctta tgtgtgacat gttctaatat agtcacattt tcattatttt 60
tattataagg cctgctgaaa atgactgaat ataaacttgt ggtagttgga gctggtggcg 120
<210> 203
<211> 120
<212> DNA
<213> Homo sapiens
<400> 203
gcgagcgcgg cgcaggcact gaaggcggcg gcggggccag aggctcagcg gctcccaggt 60
gcgggagaga ggtacggagc ggaccacccc tcctgggccc ctgcccgggt cccgaccctc 120
<210> 204
<211> 120
<212> DNA
<213> Homo sapiens
<400> 204
agctcgattt tcctaggcgg cggccgcggc ggcggaggca gcagcggcgg cggcagtggc 60
ggcggcgaag gtggcggcgg ctcggccagt actcccggcc cccgccattt cggactggga 120
<210> 205
<211> 120
<212> DNA
<213> Homo sapiens
<400> 205
gcttctatgg tgcgttctac agcgatggcg agatcagtat ctgcatggag cacatggtat 60
gtgacaccct ctcagcctct ggagcaatgg ccttaagagt tgggtggctc tggcctaatc 120
<210> 206
<211> 120
<212> DNA
<213> Homo sapiens
<400> 206
tacattccct ttcctctagg taataaaagg cctgacatat ctgagggaga agcacaagat 60
catgcacaga ggtaagaagt tatttgctag ttattttgct ttgaatttta gatataatcc 120
<210> 207
<211> 120
<212> DNA
<213> Homo sapiens
<400> 207
atgctgatcc ttctcttccc caatctacct gtgtcagttc cctccttttc tattttctct 60
tccctgcaga tgtcaagccc tccaacatcc tagtcaactc ccgtggggag atcaagctct 120
<210> 208
<211> 120
<212> DNA
<213> Homo sapiens
<400> 208
gccaggcaac agctcttacc ttgtctttct tcctttaagc ttaataaaaa accccgcaga 60
gagagcagat ttgaagcaac tcatggtgag tctatttatt ccggattctt acagtacctg 120
<210> 209
<211> 120
<212> DNA
<213> Homo sapiens
<400> 209
gagtcactac gcttggtaga ctcttaacag cgctgagaga ccactccaag agagcagaga 60
aataatagtt ctattctcag ttgtcaaaca gcaaacaaaa aacccttggc tggggggtga 120
<210> 210
<211> 120
<212> DNA
<213> Homo sapiens
<400> 210
aattctcttg aaaacagaga aactatttcc tgtttatttt ctaaattgag acgtcacttt 60
ttaaaaattg gtacctgtaa tttagccatt tcctactcag caatgtctca tttaaactat 120
<210> 211
<211> 120
<212> DNA
<213> Homo sapiens
<400> 211
tatttgttta gcgtgtttca aagagcagat gtaagcttga gcccatcctc tgtcctatga 60
ctaagtcgat attagcaggg gttaggactg ttagttttcc agttcctact ggaggcaaat 120
<210> 212
<211> 120
<212> DNA
<213> Homo sapiens
<400> 212
tctttgttta ccactgttct ctgtatttca aaagcacctg gaaatcaata aaatttgtta 60
ttcagaacaa aagccttctc tatatatcag tatttcccaa aatgtgtttg gaaatatagg 120
<210> 213
<211> 120
<212> DNA
<213> Homo sapiens
<400> 213
tggaagctga gcactagctc ccctttattg cctgcctggc agagcctgtt tgattactgc 60
aggccctttt acccatgctt ctagtttagg tattctttct ttgatatgag gctcttgacc 120
<210> 214
<211> 120
<212> DNA
<213> Homo sapiens
<400> 214
agaaaagagt tctttctcta ggtgttctga gagaagtttg taaatttgga tagtacattc 60
tatcctgata aaaccacctt gctgtggtct tgatgtacaa aaaaaaattt tttttttgag 120
<210> 215
<211> 120
<212> DNA
<213> Homo sapiens
<400> 215
ctaataataa taataataat aataataaca acaacttatt gaatgtggcc agctcactag 60
atgaggaaag aggaaggcat tttctgcatt cttgcctagt tttccttata agcaccacta 120
<210> 216
<211> 120
<212> DNA
<213> Homo sapiens
<400> 216
agttaatagc tctgtctttt tggtgtttgc actatgtaat gcttttaata ctttttaatt 60
gtgctttttt atgtattaaa tgtttttcct tttgccattg tgtgttgtca ttatttttga 120
<210> 217
<211> 120
<212> DNA
<213> Homo sapiens
<400> 217
acaatccaaa tattgccgtt tcataaatgt aataagtaat actaattcac agagtattgt 60
aaatggtgga tgacaaaaga aaatctgctc tgtggaaaga aagaactgtc tctaccaggg 120
<210> 218
<211> 120
<212> DNA
<213> Homo sapiens
<400> 218
tcaagagcat gaacgcatca atagaaagaa ctcggggaaa catcccatca acaggactac 60
acacttgtat atacattctt gagaacactg caatgtgaaa atcacgtttg ctatttataa 120
<210> 219
<211> 120
<212> DNA
<213> Homo sapiens
<400> 219
acttgtcctt agattaatgt gtctggacag attgtgggag taagtgattc ttctaagaat 60
tagatacttg tcactgccta tacctgcagc tgaactgaat ggtacttcgt atgttaatag 120
<210> 220
<211> 120
<212> DNA
<213> Homo sapiens
<400> 220
ttgttctgat aaatcatgca attaaagtaa agtgatgcaa catcttgtat actgatagtg 60
gttattgcca gtcatgcttg attacctgca tttgcataat gatagaggaa gcctaagatg 120
<210> 221
<211> 120
<212> DNA
<213> Homo sapiens
<400> 221
tgcacatccc atcagccagg acaccagtgt atgttgggat gcaaacaggg aggcttatga 60
catctaatgt gttttccaga gtgaagtgcc tggctccatt ccaaactcct ggaagtggac 120
<210> 222
<211> 120
<212> DNA
<213> Homo sapiens
<400> 222
tgtggaacac attgtctata aagccttgcg ctcacacatt ctgcctccta aacatttcac 60
agaagatgga aatatcctgc agcttgctaa cctgcctgat ctatacaaag tctttgagag 120
<210> 223
<211> 120
<212> DNA
<213> Homo sapiens
<400> 223
gtgttaaata tggttattta tgcactgtgg gatgtgttct tctttctctg tattccgata 60
caaagtgttg tatcaaagtg tgatatacaa agtgtaccaa cataagtgtt ggtagcactt 120
<210> 224
<211> 120
<212> DNA
<213> Homo sapiens
<400> 224
aagacttata cttgccttct gatagtattc ctttatacac agtggattga ttataaataa 60
atagatgtgt cttaacataa tttcttattt aattttatta tgtatatatt gtgtcagttc 120
<210> 225
<211> 120
<212> DNA
<213> Homo sapiens
<400> 225
caaaagacat tatccatttt ttcaggcata gagaacaaaa ggaaaaaaca ggtaagctag 60
ttatttttat gaggtaaaaa aatgttctta taggatttgt gaaggaatct ttattaaaaa 120
<210> 226
<211> 120
<212> DNA
<213> Homo sapiens
<400> 226
gagaactctt ggtttaactt atttgtgatt catcagaaca ggtaaaactt ttctctgaaa 60
aagtttgagc caagtgctga ggcttcccaa atctgtttct gagcttacct attttagtga 120
<210> 227
<211> 120
<212> DNA
<213> Homo sapiens
<400> 227
tgtccagttt gaaattctca gtgatcagtc agtcaacttt ggttttagta agtaagtata 60
tttatttact tgagtgagtg attacttgtg tatggtattt gctgtataag acacgtaaac 120
<210> 228
<211> 120
<212> DNA
<213> Homo sapiens
<400> 228
tgaccataaa aatgagtact gcagatgcac tgtaagcacc tgacttctgg aatcccttgt 60
tatttggggt ttctaaagct cgtcaactgt gatcacagta aaagaaaact tatttaataa 120
<210> 229
<211> 120
<212> DNA
<213> Homo sapiens
<400> 229
tactaatggg acattcacat gtgtttcagc aaggtgaaaa aattattcag gagttcctgt 60
ccaaggtgaa acaaatgccc tttactgaaa tgtcagaaga aaacatcaca ataaagttaa 120
<210> 230
<211> 120
<212> DNA
<213> Homo sapiens
<400> 230
aacagctaaa agctgaagta atagcaaaga ataatagctt tgtaaatgaa atcatttcac 60
gaataaaagt tactacgtga aaaatcccag taatggaatg aaggtaatat tgataagcta 120
<210> 231
<211> 120
<212> DNA
<213> Homo sapiens
<400> 231
ttgtctgtaa tagttttata ttgttttata ttaacccttt ttccatagtg ttaactgtca 60
gtgcccatgg gctatcaact taataagata tttagtaata ttttactttg aggacatttt 120
<210> 232
<211> 120
<212> DNA
<213> Homo sapiens
<400> 232
caaagatttt tattttgaaa aatgagagct gtaactgagg actgtttgca attgacatag 60
gcaataataa gtgatgtgct gaattttata aataaaatca tgtagtttgt ggaatttgag 120
<210> 233
<211> 120
<212> DNA
<213> Homo sapiens
<400> 233
tttcttaagg catgcatggt agaaaatgaa tgtgaagacc ccagccagga gactattacg 60
ttcctctata aattcattaa gggagcttgt cctaaaagct atggctttaa tgcagcaagg 120
<210> 234
<211> 120
<212> DNA
<213> Homo sapiens
<400> 234
cttgctaatc tcccagagga agttattcaa aagggacata gaaaagcaag agaatttgag 60
aagatgaatc agtcactacg attatttcgg taactaacta actataatgg aattataact 120
<210> 235
<211> 120
<212> DNA
<213> Homo sapiens
<400> 235
aattttaagg gaagtttgcc tggctagtga aaggtcaact gtagatgctg aagctgtcca 60
taaattgctg actttgatta aggaattata gactgactac attggaagct ttgagttgac 120
<210> 236
<211> 120
<212> DNA
<213> Homo sapiens
<400> 236
ttctgacaaa ggtggtaaat tcagacaaca ttatgatcta ataaacttta ttttttaaaa 60
atgaccattt ttccattttc tttctaggaa attaaaccct tttaattctt atctaccttc 120
<210> 237
<211> 120
<212> DNA
<213> Homo sapiens
<400> 237
agatgagtca agaggagtct actcgcttct atgaccaact gaaccatcac atttttgaat 60
tggtttccag ctcagatgcc aatgagagga aaggtggcat cttggccata ggtaaggaca 120
<210> 238
<211> 120
<212> DNA
<213> Homo sapiens
<400> 238
gtttgccagt ggcctaaaga gccggaatga ggaaaccagg gccaaagccg ccaaggagct 60
ccagcactat gtcaccatgg aactccgaga ggtgcttctg ggatctgggg ccagtcattg 120
<210> 239
<211> 120
<212> DNA
<213> Homo sapiens
<400> 239
ttatccagaa tattaaagga aacttctctc taaagaacct cagggcaaga tgcttggaac 60
cggacctgcc gccgccacca ccgctgccac cacatctagc aatgtgagcg tcctgcagca 120
<210> 240
<211> 120
<212> DNA
<213> Homo sapiens
<400> 240
cctcgctccc ggcttagagg acagcgggga aggcgggcgg tggggcaggg ggcctgaagc 60
ggcggtaccg gtgctggcgg cggcagctga ggccttggcc gaagccgcgc ggtgagtcta 120
<210> 241
<211> 120
<212> DNA
<213> Homo sapiens
<400> 241
aacttttctg taaccaacct ggtatgttac taattttatt tcactagttt ccagtaaggg 60
ggttgaaatc acaaaatatt ctcttggttt gtatgtgaga gagagttcac aggatttgtc 120
<210> 242
<211> 120
<212> DNA
<213> Homo sapiens
<400> 242
atctcaggag aaccatacag acttttgact ggcgttgagt acgttgttgg aaggaaaaac 60
tgtgccattc tgattgaaaa tgatcagtcg atcagccgaa atcatgctgt gttaactgct 120
<210> 243
<211> 120
<212> DNA
<213> Homo sapiens
<400> 243
ccccagccct gaggagccgg accgatgtgg aaactgctgc ccgccgcggg cccggcagga 60
ggtaagggca gaagggaagc ctcggggcct attttcccgg tagcgactgc ctcgggggag 120
<210> 244
<211> 120
<212> DNA
<213> Homo sapiens
<400> 244
ccgcctcatc caaggcagcc tgcgtggctc ccgggagcgc gcacgtcccg gagcccatgc 60
cgaccgcagg cgccgtatcc gcgctcgtct agcagccccg gttacgcggt tgcacgtcgg 120
<210> 245
<211> 120
<212> DNA
<213> Homo sapiens
<400> 245
gtgtaaaatt tgacaaaaaa agtatattta ctatactgta aatatatgtg atgatatatt 60
gtattatttt gcttttttgt aaagcagtta gttgctgcac atggataaca acaaaaattt 120
<210> 246
<211> 120
<212> DNA
<213> Homo sapiens
<400> 246
gattattctc gtgttagtat tgttaacttc tttttgcgac tgcgttacat catttaaaga 60
aaatgctgtg tattgtaaac ttaaattgta tatgataact tactgtcctt tccatccggg 120
<210> 247
<211> 120
<212> DNA
<213> Homo sapiens
<400> 247
cctaaacttt ggcagttcct ttgtctacaa ccttgttaat actgtaaaca gttgtacgcc 60
agcaggaaaa atactgccca acagacaaaa tcgatcattg taggggaaaa tcatagaaat 120
<210> 248
<211> 120
<212> DNA
<213> Homo sapiens
<400> 248
ccatttcaga tctttattgt tcctcacccc attttcctcc ttgtgtatgt acttccccca 60
cccccctttt tttaagtaaa atgtaaattc aatctgctct aagatatgag gagttattta 120
<210> 249
<211> 120
<212> DNA
<213> Homo sapiens
<400> 249
attacataac acttcatgag tggctgtgtc ttgtaatttt ggggacaggt ttctctcttt 60
ccctctcttt tttttgtcaa aagcccagag actgacaacc agctgcagtg tctaagtgtt 120
<210> 250
<211> 120
<212> DNA
<213> Homo sapiens
<400> 250
cctcactgac agggtggggc ctcaccaccc ctggagggag cagcgttggc agggagacag 60
cctggcccag tgaccctggg cccaagccag cccctccagg gctttcaggg aagcgccatc 120
<210> 251
<211> 120
<212> DNA
<213> Homo sapiens
<400> 251
cattttcaaa gatgtcaaac gtcacttctt cctgtagggc ccgagtcctg cctcctatca 60
gggccagatc atagaaggct attttctatt ctggggaacg attataactt aaatgattgt 120
<210> 252
<211> 120
<212> DNA
<213> Homo sapiens
<400> 252
tttaataaaa attctaagct ggaaaatact tgccttgggc ttcctcagtt tgcctgttgc 60
tcaggccatt gaggcgtcaa gaacacggct gggtggtggg gctgtcttgt ggttctgtgg 120
<210> 253
<211> 120
<212> DNA
<213> Homo sapiens
<400> 253
cgcactgaca atccagctaa tccagaacca ctttgtagat gaatatgatc ccaccataga 60
ggtgaggccc agtggtagcc cgctgacctg atcctgtctc tcacttgtcg gatcatcttt 120
<210> 254
<211> 120
<212> DNA
<213> Homo sapiens
<400> 254
aaagtactgt agatgtggct cgccaattaa ccctgattac tggtttccaa caggttcttg 60
ctggtgtgaa atgactgagt acaaactggt ggtggttgga gcaggtggtg ttgggaaaag 120
<210> 255
<211> 120
<212> DNA
<213> Homo sapiens
<400> 255
ttccggggtc tccaacattt ttcccggctg tggtcctaaa tctgtccaaa gcagaggcag 60
tggagcttga ggtaagttta tctcatgcat agtgttcggc tttgggctgt ggaatgttca 120
<210> 256
<211> 120
<212> DNA
<213> Homo sapiens
<400> 256
tgactcgtgg ttcggaggcc cacgtggccg gggcggggac tcaggcgcct ggggcgccga 60
ctgattacgt agcgggcggg gccggaagtg ccgctccttg gtgggggctg ttcatggcgg 120
<210> 257
<211> 120
<212> DNA
<213> Homo sapiens
<400> 257
tggccccagg caatcgactg catcacgcag ggacgtgagt tggagcggcc acgtgcctgc 60
ccaccagagg tctacgccat catgcggggc tgctggcagc gggagcccca gcaacgccac 120
<210> 258
<211> 120
<212> DNA
<213> Homo sapiens
<400> 258
agcatcaagg atgtgcacgc ccggctgcaa gccctggccc aggcacctcc tgtctacctg 60
gatgtcctgg gctagggggc cggcccaggg gctgggagtg gttagccgga atactggggc 120
<210> 259
<211> 120
<212> DNA
<213> Homo sapiens
<400> 259
ctgccctcag catcccccat agctcccagc agccccaggg tgatctcaaa gtatctaatt 60
caccctcagc atgtgggaag ggacaggtgg gggctgggag tagaggatgt tcctgcttct 120
<210> 260
<211> 120
<212> DNA
<213> Homo sapiens
<400> 260
ctaggcaagg tcccgtcata gcaattatat ttattatccc ttggctgtgt ctcttgccag 60
ttattgggat gacgtcgttc caggagggag gcattgggat tcaggtaggg ggacagctct 120
<210> 261
<211> 120
<212> DNA
<213> Homo sapiens
<400> 261
aactattgct ccctgcgttc tttgatcatt acctatgact tacaaatctg cctggagatg 60
tggacattct gcatttgctt ctgtatctgg agagatgttt gtatatatcc aggccgtata 120
<210> 262
<211> 120
<212> DNA
<213> Homo sapiens
<400> 262
cacacacatt tccatatctc tctacagata tatttcccct tcaatcgtga cctggtattt 60
ggaactctcc ttttcatttg gcttatcttc cttttaatgt gatgtctctg tgctaatact 120
<210> 263
<211> 120
<212> DNA
<213> Homo sapiens
<400> 263
taccagttct tgttttgcaa tctgttttga ggtccattgc tttactaaga cccactgcat 60
cttggctgat ttcaaagtga cacctgaata cagtgtttaa aaaaaaaaaa gttttgtttg 120
<210> 264
<211> 120
<212> DNA
<213> Homo sapiens
<400> 264
taaatcatgt gaccagcttc tctcaacctg acatggaaag tctcttgtac tacagtgtat 60
ttaataaaaa tgatgtctta caataaataa catactccaa aagagagact aaaaatgaca 120
<210> 265
<211> 120
<212> DNA
<213> Homo sapiens
<400> 265
accccacccc cctctcctct cctcctcctc ttttttagaa gcagcgatcg gagatggatg 60
tctctctttg cccagccaag tgtagtttct ggcggatttt cttgctggga agcgtctggc 120
<210> 266
<211> 120
<212> DNA
<213> Homo sapiens
<400> 266
ctcctcgcgg ctcccacccg gcggcggcgg cggcggcggc ggcgtccgcg atggtttcag 60
acgctgaagg attttgcatc tgatcgctcg gcgtttcaaa ggcagaggcc ccccctcccc 120
<210> 267
<211> 120
<212> DNA
<213> Homo sapiens
<400> 267
tgttgcaacc ctgcaaagtc tcggagtcgg agagcgcgcc tcgcttccag agcccccgga 60
cccggcgagt cagcgatcgc cgagccggcc accatgcccg gcagaccgcg ccactaggcg 120
<210> 268
<211> 120
<212> DNA
<213> Homo sapiens
<400> 268
tcggagcact tgtacatttc tgcagccgcg cggcgagcca ttcgcggcgg ctgctgcagc 60
tcctactgca tcttccttct cttcctttcc tcgggctccg ggtgtgtgta tgtgtgagag 120
<210> 269
<211> 120
<212> DNA
<213> Homo sapiens
<400> 269
tcctctagcg tgcccaaaga gctgaaaaga ttaagcattc tattaagaaa acagtagaag 60
aacaagattg tttgtctcag caggatctct caccgcagct aaaacactca ggtaaatcta 120
<210> 270
<211> 120
<212> DNA
<213> Homo sapiens
<400> 270
tcttcttcca gttaaaggag aaattagcat tcttgaaaag ggaatacagc aagacactag 60
cccgccttca ggtaagtgaa tcgtattctc aaattaaggt gttatagtac aaacaattta 120
<210> 271
<211> 120
<212> DNA
<213> Homo sapiens
<400> 271
gacggctgct cttttcgttc tgtcgcctgc ccgatggacg agcctcccgg gaagcccctc 60
agctgtgagg agaaggaaaa ggtgccgggg gtgcgggaag ggcggacgca ggactctgac 120
<210> 272
<211> 120
<212> DNA
<213> Homo sapiens
<400> 272
gcccgcgtgg gtcagctgat cgcgcactga gggtgcgatc ccgggctccc cattccttcc 60
tggggcgcct ccccggccca gggccaactg ggtcccggtg tcggcaggcc tggggtcggc 120
<210> 273
<211> 120
<212> DNA
<213> Homo sapiens
<400> 273
gggacaaagg cgcactacgg gtcggaaact ccccgcgctc ctctttcccg ctcgtcgcgg 60
ggcagcttca aagctgtcaa cgtttccctc agtccccaat accagtgaca ggtcgggaaa 120
<210> 274
<211> 120
<212> DNA
<213> Homo sapiens
<400> 274
cgcggcggaa gccccgcccc ggccgtgggg acgcgcgggt cgggccgggc gcgcggggtt 60
gggcggggcg cggcggctgg cctccggatg ggcccagtag ccttgtcgca cctgccggca 120
<210> 275
<211> 120
<212> DNA
<213> Homo sapiens
<400> 275
atagcagcag ccgtggcggc cacggggcgg ggcgcggcgg tcggtgaccg cggccggggc 60
tgcaggcggc ggagcggctg ggtaaggccg ggcccagggc gggtggggcc gctccccctt 120
<210> 276
<211> 120
<212> DNA
<213> Homo sapiens
<400> 276
cgcgcggagc agggatcgct tggcggccgc gggactggtt ttgcggcggc accgggaggg 60
gtaagggagg tgagggcggc gggtgccgaa gcgacggcag cggccgcggc cggaggagca 120
<210> 277
<211> 120
<212> DNA
<213> Homo sapiens
<400> 277
gaggccggat gaaacttctc agtccagcag tttccagtcc taacaaatgc tcccacctga 60
atttgtatat gactgcattt gtgtgtgtgt gtgtgttttc agcaaattcc agatttgttt 120
<210> 278
<211> 120
<212> DNA
<213> Homo sapiens
<400> 278
ccttttggcc tcctgcaaag tctccagaag aaaatttgcc aatctttcct actttctatt 60
tttatgatga caatcaaagc cggcctgaga aacactattt gtgacttttt aaacgattag 120
<210> 279
<211> 120
<212> DNA
<213> Homo sapiens
<400> 279
tttagaaata ataaaaagaa agatacttac atgttcccaa aacaatggtg tggtgaatgt 60
gtgagaaaaa ctaacttgat agggtctacc aatacaaaat gtattacgaa tgcccctgtt 120
<210> 280
<211> 120
<212> DNA
<213> Homo sapiens
<400> 280
catgtttttg ttttaaaacg tgtaaatgaa gatctttata tttcaataaa tgatatataa 60
tttaaagtta tactaaggtt tcagcatttt tgtttttagt ttaatcataa gaattaaagc 120
<210> 281
<211> 120
<212> DNA
<213> Homo sapiens
<400> 281
agccgcagcc actcaagtgc cggacttgtg agtactctgc gtctccagtc ctcggacaga 60
agttggagaa ctctcttgga gaactccccg agttaggaga cgagatctcc taacaattac 120
<210> 282
<211> 120
<212> DNA
<213> Homo sapiens
<400> 282
gttttagtga gggggcagtg gaactcagcg agggactgag agcttcacag catgcacgag 60
tttgatgcca gagaaaaagt cgggagataa aggagccgcg tgtcactaaa ttgccgtcgc 120
<210> 283
<211> 120
<212> DNA
<213> Homo sapiens
<400> 283
tgctcccgca ctactgggat ctgagatctt cggagatgac tgtcgcccgc agtacggagc 60
cagcagaagt ccgacccttc ctgggaatgg gctgtaccga gaggtccgac tagccccagg 120
<210> 284
<211> 120
<212> DNA
<213> Homo sapiens
<400> 284
cagtccacag ctgtcactaa tcggggtaag ccttgttgta tttgtgcgtg tgggtggcat 60
tctcaatgag aactagcttc acttgtcatt tgagtgaaat ctacaacccg aggcggctag 120
<210> 285
<211> 120
<212> DNA
<213> Homo sapiens
<400> 285
agccacttct gggtacttca gtatcagaga tcagttctcg tggtttagac agttcctatc 60
tatagctgac tatccttgtc cttgaatatg gtgtaactga ctattggctc tacagtttta 120
<210> 286
<211> 120
<212> DNA
<213> Homo sapiens
<400> 286
ttgggccact taagaaatat ttccttgaat aattattttg agaaaaagtc taaaagtaat 60
aaaaataatt ttaaacacac tgtagtaaga aatgactgtt ggaaaattat gctttcactt 120
<210> 287
<211> 120
<212> DNA
<213> Homo sapiens
<400> 287
tctaccatat tctcagctat acaaaaccat ttattttgaa gatttttaga ctactgttaa 60
tttgaaatct gttactctta ttgtggaatt tgttttttta aaaaagatgt ttctaattgg 120
<210> 288
<211> 120
<212> DNA
<213> Homo sapiens
<400> 288
atttttaaaa gaagaatgga atttggttgc tattttacaa tagaacctaa gctttttgtg 60
gttcttagtg tcctatgtaa aacttagtgt caaagtaatc aactttgaga ttttcccttc 120
<210> 289
<211> 120
<212> DNA
<213> Homo sapiens
<400> 289
atgttgaata gcatctcagg tttcatttca caatgcacgc atggagttgg aaggagttca 60
acagacagac agtttttctt tatcaaccgg cggccttgtg acccagcaaa ggtatttaaa 120
<210> 290
<211> 120
<212> DNA
<213> Homo sapiens
<400> 290
cagttgcaaa gcctcattcc ttttgttcag ctgcccccta gtgactccgt gtgtgaagag 60
tacggtttga gctgttccga tgctctgcat aatctttttt agtaagtaga ttgctggcaa 120
<210> 291
<211> 120
<212> DNA
<213> Homo sapiens
<400> 291
ggaagcccca gcataaagga aaatatcggc tctgtgtttg ggcagaagca ggtagtgatg 60
gccggttact tcaacgcctc ttattgctct agtgattata gcgggtttcc attgtccctt 120
<210> 292
<211> 120
<212> DNA
<213> Homo sapiens
<400> 292
caggagtatg ccaaaatggt ccaggtctta catgcatact gtatcatttc agcaggcatc 60
cgtgtaagtt gcaccaatca gcttggacaa ggaaaacgac agcctgtggt atgcacaggt 120
<210> 293
<211> 120
<212> DNA
<213> Homo sapiens
<400> 293
ctgacccgcc tccccacagg agccgtgtgt gagttctgcc agccccggga gtctgagctg 60
tatcagaagg aggtgagagg gccgggaggt gaggaggggc caggtgggga ggcgggggcg 120
<210> 294
<211> 120
<212> DNA
<213> Homo sapiens
<400> 294
cgtccccagg tatcccatct gaatgccctg gaggagcgct tctcgcgcct ctggacgcag 60
tgccagcgct gccagggcag cctgcacgag gacgtcatct gcaccaggtg tgtgccatgt 120
<210> 295
<211> 120
<212> DNA
<213> Homo sapiens
<400> 295
ggcactgggc cttggctggt cctgaccctg cccctgcccc cacccgcagc cgggactgcc 60
ccatcttcta catgcgcaag aaggtgcgga aggacctgga agaccaggag cagctcctgc 120
<210> 296
<211> 120
<212> DNA
<213> Homo sapiens
<400> 296
ggcgcttcgg accccctgga cctgaggcct ggtgaccttg caagcatccc atggggcggg 60
ggcgggacca gggagaatta ataaagttct ggacttttgc tatatggtgc tttgtggtct 120
<210> 297
<211> 120
<212> DNA
<213> Homo sapiens
<400> 297
gttgactgat tctcttgtag accgagattt tagatgaaga taagcgctta ggcagtgcag 60
tggattacta ctttattcaa gatgacggaa gcagatttaa ggtaagcccc tgactgcgac 120
<210> 298
<211> 120
<212> DNA
<213> Homo sapiens
<400> 298
gaagacaggc tggctcatta acatgcatcc tgtaagcact aggtccttct cccacccagg 60
aatatggctg caacccttct ggtcatagcg tggtccttat ctaaagagtg ggggacacat 120
<210> 299
<211> 120
<212> DNA
<213> Homo sapiens
<400> 299
ttcactcagg gatgatggcg ccacttcctc agtttcggca ctcaagcgcc tggaacggag 60
tcagtggacg gataagatgg atttgcggtt tggttttgag cggctgaagg agcctggtga 120
<210> 300
<211> 120
<212> DNA
<213> Homo sapiens
<400> 300
ctgaagcaga ggtggtagcc aacggctcca tgtctctgag gagcggcggg cggcggcgcg 60
cggacccagg cgcggatggc gaggccagca ggtgaggggc gccctcctga ggctctcggg 120
<210> 301
<211> 120
<212> DNA
<213> Homo sapiens
<400> 301
taattcttaa tggcactttt actaatttat ttggggatct tgggtacatt cttaatttgt 60
gtttattctt cacgcttgac ttgcaagtgg gatattcccc tgccacaagt gtcaaacagt 120
<210> 302
<211> 120
<212> DNA
<213> Homo sapiens
<400> 302
gatattcttc ctgtgttgtg actggacagt tttccagatc ttttttggga gattttccta 60
cagcttggtt gtatgtcttg agataacacc accaaacagc tctcagaaat tcttttttga 120
<210> 303
<211> 120
<212> DNA
<213> Homo sapiens
<400> 303
ttgatcagta gctatgatga ttctcctcca tgacactaag gattagttta tatatttaag 60
agaaataatt gctaaaatta aaatgcctct atcaaggaat gctattataa attattgtta 120
<210> 304
<211> 120
<212> DNA
<213> Homo sapiens
<400> 304
acattctcaa gtattaattt tttaatttca ttggtgtagc aaactctaag cccagccact 60
cattttacat ggccatggtt aatcttttta ttaataaaaa ttatacttag aataaactta 120
<210> 305
<211> 120
<212> DNA
<213> Homo sapiens
<400> 305
cctacatttt acaaatgccc tttcagtttc tattttcttt ttccattaaa ttgccctcat 60
gtcctaatgt gcagtttgta agtgtgtgtg tgtgtgtctg tgtgtgtgtg aatttgattt 120
<210> 306
<211> 120
<212> DNA
<213> Homo sapiens
<400> 306
tcaagagtgc tagacttcca atttgagaga ttaaataatt taattcaggc aaacattttt 60
cattggaatt tcacagttca ttgtaatgaa aatgttaatc ctggatgacc tttgacatac 120
<210> 307
<211> 120
<212> DNA
<213> Homo sapiens
<400> 307
agtaatgaat cttggatatt aatgaatttg ttagtagcat cttgatgtgt gttttaatga 60
gttattttca aagttgtgca ttaaaccaaa gttggcatac tggaagtgtt tatatcaagt 120
<210> 308
<211> 120
<212> DNA
<213> Homo sapiens
<400> 308
tccatttggc tactgatgga caaaaaatag aaatgccttc ctatggagag tatttttcct 60
ttaaaaaatt aaaaaggtta attattttga ctattcggtt ttaaactttt tattcaacaa 120
<210> 309
<211> 120
<212> DNA
<213> Homo sapiens
<400> 309
gggagtttgg caaaatatat acctcagaat tatcccacct aaggggcaag agacctggag 60
tatttatata acaacttgcc agggttactg agtgaaggct attctagcac atgttagtta 120
<210> 310
<211> 120
<212> DNA
<213> Homo sapiens
<400> 310
ctgtctaaaa agacaaaaaa aaaaaaaaaa aaaaagcagc agcagctgaa agttggcagg 60
agcacactgg cagttcctag gatcatagga tataggcagg gcactgacca ctcctacaac 120
<210> 311
<211> 120
<212> DNA
<213> Homo sapiens
<400> 311
caccatctat acactgataa ctcataaatg tttgtgtcca atccagatct ctcctaaatg 60
cttgactgat atattcagct gcctgtggat aactgggcat ctatctgcac ttgaatatct 120
<210> 312
<211> 120
<212> DNA
<213> Homo sapiens
<400> 312
aataaacgtc taaaacttaa aatgaccaaa accagtcttt ctcccagaac ttgaatctct 60
tctgttaatg gcaactccat tattccaatt gctcaggcaa aaattggcat tatccttgat 120
<210> 313
<211> 120
<212> DNA
<213> Homo sapiens
<400> 313
ctttccagtc tccttgcttc cagtctagct gtggcctgac tccaagtcca gtgtaagatt 60
tttttttttc agcaataagg aatcggttca ttcacctgta cgaaaaccag tgggaggatc 120
<210> 314
<211> 120
<212> DNA
<213> Homo sapiens
<400> 314
atgcataagg ctcatatcct tgctgtgaat ttcaaaggac tggctaagta aataaaatta 60
tcatgccaac ctgagctggt atagattgca ttgattgctg ctaatagcca aaatggacat 120
<210> 315
<211> 120
<212> DNA
<213> Homo sapiens
<400> 315
tttgtatagg gcagtaaaca agagctctga aaggggaagg aagccaggag aaagccagct 60
ccattagtca cgcagcagca tatcctgtca caaaggaccc cagttgagta atcgcccaaa 120
<210> 316
<211> 120
<212> DNA
<213> Homo sapiens
<400> 316
atatgcctgt tatttttttc tgtcagaaaa aaaatggggc ctgccaaaac gtactgtaaa 60
aaaaaaaaaa atctggtgtc ttaggcccag agagggaaaa gaaaataaag aagaaagagt 120
<210> 317
<211> 120
<212> DNA
<213> Homo sapiens
<400> 317
tcaatgtgta caagtggact tgttacctta aagtataaat aaacacacta tggcatgaat 60
gaatccagat catatgaagt gaatgggaaa aatacctaaa tatgattctg tgaaagtttt 120
<210> 318
<211> 120
<212> DNA
<213> Homo sapiens
<400> 318
tctaaagcag tattctgcaa ttatatttta ccctgttttc attttcagta acattcagta 60
gagatgatta ttatatttca caaatgtgga aagctgatct catgtggcca gtctgaattt 120
<210> 319
<211> 120
<212> DNA
<213> Homo sapiens
<400> 319
ctgttcagtt ttataggtaa gatacaaatt ttaggtgacc aaactgattt tagtgacctc 60
aatcctaaaa tctaagccat ttgtttagct tttaatgaca ttttataatg ttaaagggag 120
<210> 320
<211> 120
<212> DNA
<213> Homo sapiens
<400> 320
gactttggag ctgttatctc atctagagat tgtttggaac atatgtcttc cagaataggt 60
tgataagctc acaatcattt attgctacgt ttttgttttt gttttgagac aaggtctcac 120
<210> 321
<211> 120
<212> DNA
<213> Homo sapiens
<400> 321
ggaggcccca gtcctctctg ccaatccgct atacgtgttt tgttttcagt ggtggacctg 60
gtttctgcag acctggaaga ggtagctcag aaatgtggct tgtcttacaa ggtgagctcc 120
<210> 322
<211> 120
<212> DNA
<213> Homo sapiens
<400> 322
gcggggaaca tgggcgtgct cagggtcgga ctgtgccctg gccttaccga ggagatgatc 60
cagcttctca ggagccacag gatcaagaca ggtgaccggg tgtgcgcgtg ccagggagcc 120
<210> 323
<211> 120
<212> DNA
<213> Homo sapiens
<400> 323
tctcctccgg cagccagcgc gcctgtgtcc tctctaggaa ggggtagggg aggggcgtct 60
ggagaggacc ccccgcgaat gcccacgtga cgtgcagtcc ccctggggct gttccggcct 120
<210> 324
<211> 120
<212> DNA
<213> Homo sapiens
<400> 324
ccggaagcgg cagcgcggcg cgacccggcg ggcgggctct gggcgcggga atcccggcgg 60
atcccgggcg ggcggatgac ccccagccct acccttggtg ccgcctcctc ctctctcctt 120
<210> 325
<211> 120
<212> DNA
<213> Homo sapiens
<400> 325
cagttgcagg ggaattcctt caaaaaacca aaatttatac ctccaggaag aagtaatcca 60
ggtctgaatg aagagattac aaaactgaat ccagatataa aattatttga ggtaaggcaa 120
<210> 326
<211> 120
<212> DNA
<213> Homo sapiens
<400> 326
tgtagttttg agctattttt atatttgggg gtgattgtaa ttagattcgt ggatagttaa 60
ctgttttggg tatttttcag gtcacgactg ctgaatatga gacgatctgc agcaccaagt 120
<210> 327
<211> 120
<212> DNA
<213> Homo sapiens
<400> 327
taccagaagg acttctttgc agggccagtg gtttctgtca gattttcgcc ggtgcgtcct 60
gcagggggaa gctcgggagg ctgcgacagc ctgtaggctc gtgcgggaca aagcagggag 120
<210> 328
<211> 120
<212> DNA
<213> Homo sapiens
<400> 328
agtagggcag gacagggcag tgcagcggct aggtagtgcg cacgcgcggc gggctcgtcc 60
gcgattggct tcgccgaggc gggatccttg agcttctccg gcggcgaggg gatagctggt 120
<210> 329
<211> 120
<212> DNA
<213> Homo sapiens
<400> 329
tgtccctagg ttgcactgcc gacgttgtgt caacagccgt cagatccggc caccccctga 60
tggttctgac tgcacttcag acctggcagg gtggaaccac tgcactgata agtgggggct 120
<210> 330
<211> 120
<212> DNA
<213> Homo sapiens
<400> 330
ccgggatgag gtactccagg ctgcctggga tgctgcctcc actgccatca ccttcgtctt 60
ccaccagcgt tctcatgagg agcagcgggg cctccgctga taaccagctg gtctgggtgt 120
<210> 331
<211> 120
<212> DNA
<213> Homo sapiens
<400> 331
agctcttaga ggaaggagat agggaaaagg ggctccttgc tccacagggc cctgttgaat 60
tttgttctct gggagaaaat catcaagaag ggctgcatga tgtttgccca aaatttattt 120
<210> 332
<211> 120
<212> DNA
<213> Homo sapiens
<400> 332
tataagaaaa acttttttgg ttaaaaaaaa gaataaaggt atgaaagggt ttgaggcctg 60
agagcagtgt ggtaagccca gcagggaaga agccccctat acttctctaa agcctgggtg 120
<210> 333
<211> 120
<212> DNA
<213> Homo sapiens
<400> 333
atatttaagg tagcttcagc tagcttttag gaaaatcact ttgtctaact cagaattatt 60
tttaaaaaga aatctggtct tgttagaaaa caaaatttta ttttgtgctc atttaagttt 120
<210> 334
<211> 120
<212> DNA
<213> Homo sapiens
<400> 334
caaacttact attttgacag ttattttgat aacaatgaca ctagaaaact tgactccatt 60
tcatcattgt ttctgcatga atatcataca aatcagttag tttttaggtc aagggcttac 120
<210> 335
<211> 120
<212> DNA
<213> Homo sapiens
<400> 335
tatttctggg tcttttgcta ctaagttcac attagaatta gtgccagaat tttaggaact 60
tcagagatcg tgtattgaga tttcttaaat aatgcttcag atattattgc tttattgctt 120
<210> 336
<211> 120
<212> DNA
<213> Homo sapiens
<400> 336
ttttgtattg gttaaaactg tacatttaaa attgctatgt tactattttc tacaattaat 60
agtttgtcta ttttaaaata aattagttgt taagagtctt aatggtctga tgttgtgttc 120
<210> 337
<211> 120
<212> DNA
<213> Homo sapiens
<400> 337
aagttctttt acaaatatct atagacatgg taaacttttg gttttcagat atgcttaatg 60
atagtcttac taaatgcaga aataagaata aactttctca aattattaaa aatgcctaca 120
<210> 338
<211> 120
<212> DNA
<213> Homo sapiens
<400> 338
cagtaagtgt gaattgctgc aacaggtttg ttctcaggag ggtaagaact ccaggtctaa 60
acagctgacc cagtgatggg gaatttatcc ttgaccaatt tatccttgac caataaccta 120
<210> 339
<211> 120
<212> DNA
<213> Homo sapiens
<400> 339
attgtctatt cctgagttat aaaagtcccc atccttatta gctctactgg aattttcata 60
cacgtaaatg cagaagttac taagtattaa gtattactga gtattaagta gtaatctgtc 120
<210> 340
<211> 120
<212> DNA
<213> Homo sapiens
<400> 340
agttattaaa atttgtaaaa tctatttatg aaaggtcatt aaaccagatc atgttccttt 60
ttttgtaatc aaggtgacta agaaaatcag ttgtgtaaat aaaatcatgt atcataaaat 120
<210> 341
<211> 120
<212> DNA
<213> Homo sapiens
<400> 341
tactgtctta ttccgaagct tgtcaatttt gcaactcttg gctgcctatg gatttctgtg 60
gtgcagtgta cagttttaaa tagctgccta aagtcgtgtg taactaatct ggtaagtctc 120
<210> 342
<211> 120
<212> DNA
<213> Homo sapiens
<400> 342
aaaatccatc agctactcct ccaattgaag tgatgaagcc caaataattc atatagcaaa 60
atggagaaaa ttagaccggc catctaaaaa tctgccattg gtgaagtgat gaagaacatt 120
<210> 343
<211> 120
<212> DNA
<213> Homo sapiens
<400> 343
gttatgaaat agctcttatg gaactgttac aagctttcaa gcattcaaag gtctaaatga 60
aaaaggctaa gtattatttc aaaaggcaag tatatcctaa tatagcaaaa caaacaaagc 120
<210> 344
<211> 120
<212> DNA
<213> Homo sapiens
<400> 344
agactgcatg tgtcacaccc ttgctgaaat acaattcgtt ttctttaatt tccatgtgaa 60
gtgcacttct aagaactaac ctttagtcac tgggtgactt tatgggagta aaaggaagct 120
<210> 345
<211> 120
<212> DNA
<213> Homo sapiens
<400> 345
ggaagccgcg cggccgcttt ggttttttgt ttggttggtt ccattttctt tttttctttt 60
tttttttaag aaaaaataaa aggtggattt gagctgtggc tgtgaggggt gtttgggagc 120
<210> 346
<211> 120
<212> DNA
<213> Homo sapiens
<400> 346
tgctgggtgg caggggggct gtggggtcgg gctcacgtcg cggccgcctt tgcgctctcg 60
ggtcaccctg ctttggcggc ccggccggag ggcaggaccc tcacctctcc cccaaggcca 120
<210> 347
<211> 120
<212> DNA
<213> Homo sapiens
<400> 347
ctgcgctctt gggaccccag agaaaacccg gagcaagcag gagtgtgcgg tcaatattta 60
tatcatccag aaaagaaaaa cacgagaaac gccatcgcgg gatggtgcag acgcggcggg 120
<210> 348
<211> 120
<212> DNA
<213> Homo sapiens
<400> 348
gactcggagg gtgccgtgcg ggcgaggccg cccaaatttg gcaataaata aagcttggga 60
agcttggacc tggccgtctg ggttttgttc gcgtctcaac gtggatgggg cggcagcggg 120
<210> 349
<211> 120
<212> DNA
<213> Homo sapiens
<400> 349
ggaggagccg cagtcagatc ctagcgtcga gccccctctg agtcaggaaa cattttcaga 60
cctatggaaa ctgtgagtgg atccattgga agggcaggcc caccaccccc accccaaccc 120
<210> 350
<211> 120
<212> DNA
<213> Homo sapiens
<400> 350
ggtgttgggg gagggggttc cttctctgca ggcccaggtg acccagggtt ggaagtgtct 60
catgctggat ccccactttt cctcttgcag cagccagact gccttccggg tcactgccat 120
<210> 351
<211> 120
<212> DNA
<213> Homo sapiens
<400> 351
ggctccgggg acactttgcg ttcgggctgg gagcgtgctt tccacgacgg tgacacgctt 60
ccctggattg ggtaagctcc tgactgaact tgatgagtcc tctctgagtc acgggctctc 120
<210> 352
<211> 120
<212> DNA
<213> Homo sapiens
<400> 352
ggagcctcgc aggggttgat gggattgggg ttttcccctc ccatgtgctc aagactggcg 60
ctaaaagttt tgagcttctc aaaagtctag agccaccgtc cagggagcag gtagctgctg 120
<210> 353
<211> 120
<212> DNA
<213> Homo sapiens
<400> 353
agagaatggc ccaacaagca aatgtcgggg agcttcttgc catgctggac tcccccatgc 60
tgggtgtgcg ggacgacgtg acagctgtct ttaaagagaa cctcaattct ggttagcaaa 120
<210> 354
<211> 120
<212> DNA
<213> Homo sapiens
<400> 354
gaaaaatggg gccatttagt gactgttcat cttccttttt ctcagtttgg tagtggcccc 60
aatgaagaac cttcagaacc tgtagcacac gtcctggagc cagcacagcg ccttcgagcg 120
<210> 355
<211> 120
<212> DNA
<213> Homo sapiens
<400> 355
tccttcagtg accatgaaag acaccaggtt gacagcactg gaaactgaag taccagttgt 60
cgctagaaca ggtaagctat aaccaggcca gtggttagag gaagatggga gggaattatc 120
<210> 356
<211> 120
<212> DNA
<213> Homo sapiens
<400> 356
acgacggggg aggtgctgta cgtccaagat ggcggcgccc tgtaggctgg agggactgtg 60
aggtaaacag ctgaggggga ggagacggtg ggtgagtatg ggggtgtctc cccctccttt 120
<210> 357
<211> 120
<212> DNA
<213> Homo sapiens
<400> 357
ctggcctggg gcaagggagg atgacaaggc ctctggggtg atgagagtgc ctggcagaca 60
gctgtgcccc cagcaccggc ccaaggccaa gctcgcatcc aagcagcagc cgggctgcca 120
<210> 358
<211> 120
<212> DNA
<213> Homo sapiens
<400> 358
taacgccacc acacctacca agcgcagcag gtgttggggg aggccagctc tgggcgcagg 60
cccctcagcc ctagtgaaaa tagtgacata caaaaatata cacattttaa caccatataa 120
<210> 359
<211> 120
<212> DNA
<213> Homo sapiens
<400> 359
attactgaca cgagacacac agtgagacgg tgcagggagt acggtaggaa ctggagaggt 60
aataacttag gggcagggtg gcggcggtgc aggctaaccc tccctgaagc cagcagcctt 120
<210> 360
<211> 120
<212> DNA
<213> Homo sapiens
<400> 360
agcagtgggg gacatctgcc cagggggtgg ggccgggcac agcccgctgt acctgaggac 60
tcggggaaat aaattagcat ctcagaggct agaaaccgtc caatactgct gtgtccttcc 120
Claims (9)
1. A kit for detecting or aiding in the detection of tumor-associated genetic variation, comprising a set of DNA probes comprising the nucleotide sequences set forth in SEQ ID NO: 1-SEQ ID NO: 360 as shown.
2. The kit according to claim 1, wherein the kit further comprises a hybridization reaction solution.
3. A set of DNA probes as claimed in claim 1 or 2.
4. The kit for detecting or aiding in the detection of tumor-associated genetic variation as set forth in claim 1 or 2 or the kit of DNA probes as set forth in claim 3 for use in any one of the following 1) to 4):
1) detecting or assisting in detecting tumor-associated gene variation;
2) the accurate treatment mode of the tumor patient is predicted or predicted in an auxiliary mode;
3) predicting the tumor onset risk of the subject;
4) and (5) carrying out molecular typing and prognosis guidance on tumor patients.
5. The use of the kit for detecting or assisting in detecting tumor-associated genetic variation according to claim 1 or 2 or the set of DNA probes according to claim 3 for preparing any one of the following products 1) to 5):
1) detecting or assisting in detecting tumor-associated gene variation;
2) the accurate treatment mode of the tumor patient is predicted or predicted in an auxiliary mode;
3) aiding in the diagnosis or diagnosis of a patient with a tumor;
4) predicting the tumor onset risk of the subject;
5) and (5) carrying out molecular typing and prognosis guidance on tumor patients.
6. Use according to claim 4 or 5, wherein the variation is a point mutation, a small fragment insertion deletion, a copy number variation, a gene fusion and/or microsatellite instability.
7. Use according to claim 4 or 5, wherein the tumour is endometrial, ovarian, breast, prostate and/or pancreatic cancer.
8. A method for detecting or assisting in detecting tumor-associated genetic variation, comprising the steps of:
(1) constructing a target genome DNA library;
(2) hybridizing the set of DNA probes of claim 3 to the DNA library to obtain a hybridization product;
(3) and performing second-generation sequencing on the hybridization product, and analyzing the variation condition of the target genome DNA according to a sequencing result.
9. The method of claim 8, wherein the tumor is an endometrial, ovarian, breast, prostate, and/or pancreatic cancer.
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN202210452387.9A CN114561472A (en) | 2022-04-27 | 2022-04-27 | Kit for detecting or assisting in detecting tumor-related gene variation and application thereof |
Applications Claiming Priority (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN202210452387.9A CN114561472A (en) | 2022-04-27 | 2022-04-27 | Kit for detecting or assisting in detecting tumor-related gene variation and application thereof |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CN114561472A true CN114561472A (en) | 2022-05-31 |
Family
ID=81720893
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN202210452387.9A Pending CN114561472A (en) | 2022-04-27 | 2022-04-27 | Kit for detecting or assisting in detecting tumor-related gene variation and application thereof |
Country Status (1)
| Country | Link |
|---|---|
| CN (1) | CN114561472A (en) |
Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20200376022A1 (en) * | 2017-03-27 | 2020-12-03 | Caris Science, Inc. | Oligonucleotide probes and uses thereof |
| CN112795647A (en) * | 2019-11-14 | 2021-05-14 | 北京肿瘤医院(北京大学肿瘤医院) | Tumor marker and application thereof |
| CN112908421A (en) * | 2021-03-22 | 2021-06-04 | 普瑞基准生物医药(苏州)有限公司 | Tumor neogenesis antigen prediction method, device, equipment and medium |
| CN113699232A (en) * | 2020-11-26 | 2021-11-26 | 普瑞基准生物医药(苏州)有限公司 | Gallbladder cancer early diagnosis kit and application thereof |
-
2022
- 2022-04-27 CN CN202210452387.9A patent/CN114561472A/en active Pending
Patent Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20200376022A1 (en) * | 2017-03-27 | 2020-12-03 | Caris Science, Inc. | Oligonucleotide probes and uses thereof |
| CN112795647A (en) * | 2019-11-14 | 2021-05-14 | 北京肿瘤医院(北京大学肿瘤医院) | Tumor marker and application thereof |
| CN113699232A (en) * | 2020-11-26 | 2021-11-26 | 普瑞基准生物医药(苏州)有限公司 | Gallbladder cancer early diagnosis kit and application thereof |
| CN112908421A (en) * | 2021-03-22 | 2021-06-04 | 普瑞基准生物医药(苏州)有限公司 | Tumor neogenesis antigen prediction method, device, equipment and medium |
Non-Patent Citations (1)
| Title |
|---|
| DONAVAN T CHENG ET AL.: "Memorial Sloan Kettering-Integrated Mutation Profiling of Actionable Cancer Targets (MSK-IMPACT): A Hybridization Capture-Based Next-Generation Sequencing Clinical Assay for Solid Tumor Molecular Oncology", 《J MOL DIAGN》 * |
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Application publication date: 20220531 |