CN114292832A - Thermophilic high-temperature-resistant polygalacturonaseMlPG28BEncoding gene and preparation method thereof - Google Patents

Thermophilic high-temperature-resistant polygalacturonaseMlPG28BEncoding gene and preparation method thereof Download PDF

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CN114292832A
CN114292832A CN202210097396.0A CN202210097396A CN114292832A CN 114292832 A CN114292832 A CN 114292832A CN 202210097396 A CN202210097396 A CN 202210097396A CN 114292832 A CN114292832 A CN 114292832A
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杨国军
刘思仪
田林芳
丛玉婷
王连顺
卢亚楠
王丽
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Dalian Ocean University
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Abstract

The invention discloses a thermophilic high-temperature-resistant polygalacturonaseMlPG28BThe amino acid sequence is shown as SEQ ID NO. 1; the DNA sequence of the coding gene is shown as SEQ ID NO. 2; the preparation method comprises the following steps in sequence: constructing the gene shown as SEQ ID NO.3 on pPICZ alpha A eukaryotic expression vector, amplifying and culturing in Escherichia coli DH5 alpha, extracting plasmid and usingSacI, linearization is carried out, a linearization product is recovered from glue and is converted into pichia pastoris X-33 competent cells by electric shock, and then the pichia pastoris X-33 competent cells are coated on a solid YPDSZ culture medium containing 100 mu g/mL bleomycin and are cultured for 5 days at the temperature of 30 ℃; selecting single colony strain on the plate, culturing on YPD solid culture medium containing 300 microgram/mL bleomycin, selecting single colony strain, performing induced expression and purification to obtain thermophilic heat-resistant polygalactoseGlucuronidaseMlPG28B

Description

Thermophilic high-temperature-resistant polygalacturonaseMlPG28BEncoding gene and preparation method thereof
Technical Field
The invention belongs to the field of genetic engineering and genetic engineering, and particularly relates to thermophilic high-temperature-resistant polygalacturonaseMlPG28BCoding gene and preparation method.
Background
Pectin is a high molecular weight carbohydrate polymer with a complex structure, is widely present in plant cell walls as a structural polysaccharide, is crosslinked with cellulose, hemicellulose and lignin to form a compact network structure, and needs to be degraded and removed in a plurality of industrial productions such as food, feed, papermaking, textile, pectin waste liquid treatment and the like.
The pectin polysaccharide backbone is mainly linked by alpha-1, 4-glycosidic linkages through the O-1 and O-4 positions of D-GalA, i.e., homogalacturonic acid, which constitutes about 70% of pectin. The alpha-1, 4-glycosidic bond in the pectin backbone can be cleaved by hydrolysis using Polygalacturonase (PG) from glycoside hydrolase 28 family (GH 28), which in turn depolymerizes the highly polymerized pectin. According to NCBI and CAZy database statistics, registered PG reaches 9000 pieces, wherein nearly 200 PG is cloned and characterized from bacteria and eukaryotes, but the optimal temperature is mainly concentrated at 30-60 ℃.
For many years, people have actively mined thermophilic, high temperature resistant PGs, e.g.Thermotoga maritimaPelB (TM 0437), the optimal temperature is 80 ℃; the optimal temperature of a soil metagenome sample (PecJKR 01) is 70 ℃;Caldicellulosiruptor besciiDSM 6725 (CbPelA, optimum temperature 72 ℃);Neosartorya fischeri p1 (Nf PG 5) optimum temperature 70 ℃;Penicillium occitanis(PG 1) optimum temperature 70 ℃;Penicillium oxalicumthe optimum temperature of CZ1028 (EPG 4) is 70 ℃;Bisporasp, MEY-1 (BiPG 28A) optimum temperature 70 ℃ andTalaromyces leycettanus JCM12802(TlPGA、TePG28a andTePG28 b) optimum temperature of 70 ℃. Although these PGs are thermophilic enzymes, they are not resistant to high temperatures,that is, the temperature (optimum temperature) at which the enzyme activity is highest is at least 70 ℃, but the catalytic enzyme activity is lost in a short time in a high-temperature environment of more than 60 ℃, and the industrial application of the catalytic enzyme in feed, papermaking, textile and the like with high-temperature requirements cannot be met.
Disclosure of Invention
The present invention provides a thermophilic high temperature resistant polygalacturonase, which aims to solve the technical problems in the prior artMlPG28BCoding gene and preparation method.
The technical solution of the invention is as follows: thermophilic high-temperature-resistant polygalacturonaseMlPG28BThe method is characterized in that: the amino acid sequence is shown as SEQ ID NO. 1.
A thermophilic high temperature resistant polygalacturonase as claimed in claim 1MlPG28BThe coding gene of (1), wherein: the DNA sequence is shown in SEQ ID NO. 2.
A thermophilic high temperature resistant polygalacturonase as claimed in claim 1MlPG28BThe preparation method is characterized by comprising the following steps in sequence: constructing the gene shown as SEQ ID NO.3 on pPICZ alpha A eukaryotic expression vector, amplifying and culturing in Escherichia coli DH5 alpha, extracting plasmid and usingSacI, linearization is carried out, a linearization product is recovered from glue and is converted into pichia pastoris X-33 competent cells by electric shock, and then the pichia pastoris X-33 competent cells are coated on a solid YPDSZ culture medium containing 100 mu g/mL bleomycin and are cultured for 5 days at the temperature of 30 ℃; selecting single colony strain on the plate, streaking YPD solid culture medium containing bleomycin 300 μ g/mL, culturing, selecting single colony strain, performing induced expression and purification, and obtaining recombinant thermophilic high temperature resistant polygalacturonase with amino acid sequence shown as SEQ ID NO.4MlPG28B
Polygalacturonase of the present inventionMlPG28BNot only is thermophilic and high-temperature resistant, but also has wide pH tolerance, and the temperature (optimum temperature) when the enzyme activity is highest is 60 ℃; after heat treatment at 60 ℃ for 2 h, more than 30% of relative enzyme activity can still be kept, and the enzyme activity still remains after heat treatment at 100 ℃ for 60 min; the relative enzyme activity is maintained at 90% or more at a pH of 2.0 to 11.0. Can satisfy the pectin enzymolysis at medium and low temperature even higher than 60 DEG CAs needed.
Drawings
FIG. 1 shows thermophilic high temperature resistant polygalacturonase of the present inventionMlPG28B induced expression for 96h on SDS-PAGE.
FIG. 2 shows a thermophilic high temperature resistant polygalacturonase enzyme according to an embodiment of the present inventionMlTemperature-dependent activity curves of PG28B are shown.
FIG. 3 shows a thermophilic high temperature resistant polygalacturonase enzyme according to an embodiment of the present inventionMlpH-dependent activity curves of PG28B are shown schematically.
FIG. 4 shows a thermophilic high temperature resistant polygalacturonase enzyme according to an embodiment of the present inventionMlTemperature stability schematic of PG 28B.
FIG. 5 shows a thermophilic high temperature resistant polygalacturonase enzyme according to an embodiment of the present inventionMlpH stability of PG 28B.
FIG. 6 shows a thermophilic high temperature resistant polygalacturonase enzyme according to an embodiment of the present inventionMlPG28B was fitted to the enzyme kinetics.
FIG. 7 shows thermophilic high temperature resistant polygalacturonase of an embodiment of the present inventionMlESI-MS analysis of PG28B on polygalacturonic acid degradation products.
Detailed Description
The invention is derived from Mucor rasteus (Mucor rasteus) (III)Mucor lusitanicus) The gene sequence of (2) was analyzed by Basic Local Alignment Search Tool (BLAST) in GenBank database, DNAMAN software for multiple sequence Alignment, and Vector NTI for sequence information. His label and codon optimization are added, and the gene shown as SEQ ID NO.3 is obtained through artificial synthesis and belongs to glycoside hydrolase 28 th family (GH 28). The gene coding region is 1098bp in length, single-chain and the sequence is from 1 st to 1077 th to code thermophilic high-temperature-resistant polygalacturonaseMlPG28B (shown in SEQ ID NO. 2), His-Tag label at position 1078-1098 and a DNA sequence of stop codon. The gene sequence is constructed on pPICZ alpha A eukaryotic expression vector, amplified and cultured in Escherichia coli DH5 alpha, extracted and usedSacI, linearization, gel recovery of linearization product and electric shock transformation into Pichia pastoris X-33 competent cells, and then coating in 100-containing solutionCulturing on solid YPDSZ culture medium of bleomycin at 30 deg.C for 5 days; and selecting a single colony strain on the plate, streaking the single colony strain into a YPD solid culture medium containing 300 mu g/mL bleomycin, carrying out high-concentration antibiotic screening, and selecting a strain with a large single colony growth, and carrying out induction expression according to a pichia pastoris expression manual method.
After the induction expression for 96h, detecting the expression by polyacrylamide gel electrophoresis, and obtaining an electrophoretogram as shown in figure 1, wherein the thermophilic high temperature resistant polygalacturonaseMlPG28BA single band with a molecular weight of about 38 kDa was present on the gel. Finally crushing, cracking and purifying the thalli, and collecting the purified liquid to obtain the recombinant expression thermophilic high-temperature-resistant polygalacturonaseMlPG 28B. The amino acid sequence is shown as SEQ ID NO.4, and the 1 st-365 th amino acid residue sequence from the amino terminal is single chain, wherein the 1 st-359 th amino acid residue sequence has thermophilic high temperature resistant polygalacturonaseMlPG28BActive amino acid sequence (shown as SEQ ID NO. 1), and amino acid Tag sequence of His-Tag at position 360-365.
Experiment:
1. temperature vs. thermophilic thermostable polygalacturonase of the examples of the inventionMlPG28B (recombinant enzyme)MlPG28B, the same applies hereinafter) Activity influence experiment
Under the condition of pH 5.0 (HAc-NaAc), 200. mu.L of 0.5% (w/v) polygalacturonic acid (PGA) was used as a substrate, and 10. mu.L of recombinase was addedMlPG28B, reacting for 30 min, determining activity by 3, 5-dinitrosalicylic acid (DNS) method, and determining polygalacturonase at 20-100 deg.C and 10 deg.C respectivelyMlPG28B activity. And (3) taking the inactivated enzyme as a reference, calculating the relative enzyme activity by taking the highest enzyme activity of the reaction as 100%, and drawing a curve according to the relative activity of the enzyme at different temperatures. The results are shown in FIG. 2, showing that the recombinant enzymeMlThe optimal reaction temperature of PG28B was 60 ℃, indicating that it is a thermophilic enzyme.
2. pH vs. recombinant enzymeMlPG28B Activity Effect test
At 60 deg.C, 200. mu.L of 0.5% (w/v) PGA with pH of 2.0-11.0, respectively, as substrate, 10. mu.L of recombinase was addedMlPG28B, reaction for 30 min, using 3, 5-dinitrosalicylic acid (DNS)The activity of the compound is measured by the method. And (3) taking the inactivated enzyme as a reference, calculating the relative enzyme activity by taking the highest enzyme activity of the reaction as 100%, and drawing a curve according to the relative activity of the enzyme at different temperatures. The results are shown in FIG. 3, showing that the recombinant enzymeMlThe optimal reaction pH for PG28B was 5.0.
3. Recombinant enzymeMlTemperature stability test of PG28B
Recombination enzymeMlPG28B was incubated at different temperatures (60 deg.C, 70 deg.C, 80 deg.C, 90 deg.C, 100 deg.C) for different periods of time, a certain amount of heat-treated enzyme solution was taken out at different time points of the above-mentioned different temperature treatments and placed at 4 deg.C for use, and then 200. mu.L of 0.5% (w/v) PGA was added as a substrate at 60 deg.C, 10. mu.L of the above-mentioned heat-treated recombinant enzyme was addedMlPG28B, reacted for 30 min, then the enzyme activity was measured by DNS method, the residual enzyme activity was detected and compared with the untreated enzyme activity, and the relative enzyme activity was calculated. The results are shown in FIG. 4, showing that the recombinant enzymeMlAfter heat treatment is carried out on PG28B at 60 ℃ for 2 hours, the relative enzyme activity of more than 30 percent can still be kept; the enzyme still has enzyme activity after heat treatment for 60 min at 100 ℃, which indicates that the enzyme is thermophilic high-temperature resistant enzyme.
4. Recombinant enzymeMlpH stability test of PG28B
Recombination enzymeMlPG28B is respectively placed in different pH buffer solutions (pH 2.0-11.0) to be diluted by 5 times, and is placed for 24 hours at the temperature of 4 ℃; subsequently, 10. mu.L of the enzyme solution was incubated with 200. mu.L of 5 mg/mL PGA substrate under optimum reaction conditions (60 ℃ C., pH 5.0) for 30 min, followed by determination of the enzyme activity by the DNS method and comparison with the untreated enzyme activity to calculate the relative enzyme activity. The results are shown in FIG. 5, showing that the recombinant enzymeMlPG28B maintained a relative enzyme activity of 90% or more at pH 2.0 to 11.0, indicating that the recombinant enzyme was present MlPG28B has a wide range of pH tolerance.
5. Recombinant enzymeMlSubstrate specificity assay for PG28B
Selecting 6 substrates of PGA, low ester pectin, high ester pectin, sodium alginate and flax seed gum to examine recombinaseMlSubstrate specificity of PG 28B. Reacting at optimum temperature of 60 deg.C and pH of 5.0 for 30 min, and detecting recombinase by standard methodMlThe relative enzymatic activity of PG 28B. The results are shown in Table 1Recombinant enzymeMlPG28B has high degrading enzyme activity to PGA and low ester pectin.
TABLE 1
Figure DEST_PATH_IMAGE001
6. Recombinant enzymeMlDetermination of enzymatic kinetic parameters of PG28B
ApPel1 (0.0159 mg/mL) enzyme solution (10. mu.l) was mixed with 200. mu.l of PGA substrates (pH 5.0) at different concentrations (0.5 mg/mL, 1.5 mg/mL, 2.5 mg/mL, 3.5 mg/mL, 4.5 mg/mL and 6.5 mg/mL), reacted at 60 ℃ for 30 min, and the activity thereof was measured by the DNS method. The obtained data are fitted by a Michaelis equation in GraphPad Prism 9.0.0 software to obtain a fitted curve of the reaction rate and the concentration of the substrate, and then relevant enzyme kinetic parameters can be obtained. The results are shown in FIG. 6 and are obtained by calculationVmax1.47 plus or minus 0.24 mg/L/s, Km is 3055 plus or minus 1104 mg/L, Kcat11.667 +/-1.905 s-1,Kcat/KmIt was 4.655. + -. 2.305 mL/mg/s.
7. Recombinant enzymeMlESI-MS analysis of PG28B on polygalacturonic acid degradation products
mu.L of recombinase was added to 500. mu.L of 0.5% (w/v) PGA with pH =5.0 as a substrate at 35 ℃MlPG28B was mixed well, shaken at 700 rpm for 21h, and ESI-MS analysis was performed on its degradation products. The results are shown in FIG. 7: when ESI-MS was performed for anion mode analysis of the degradation product, it was found that the degradation product was oligogalacturonic acid, mainly consisting of DP1, DP2, DP3, DP4, DP5, DP6, and DP 7. Indicating the recombinant enzymeMlPG28B can effectively degrade pectin polysaccharide-rich raw materials to prepare oligogalacturonan.
Sequence listing
<110> university of Dalian ocean
<120> thermophilic high-temperature-resistant polygalacturonase MlPG28B, coding gene and preparation method
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gacaacatcc attgggacgg agcaggtatt ggagaatttg ttggaggagg tcaaaagtgg 300
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atccattgcg ttggaggtca cggtttttcc gttggttctt tgggtaaggg aggttctacc 660
gaaaccgtta agcagatcag agtcaccggt tctacttgca ccaagtgcca gaacggtatc 720
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Glu Lys Val Val Leu Tyr Thr Lys Ser Ser Asn Ser Asn Leu Pro Lys
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Asp Lys Ser Leu Thr Ile Ser Asn Val Val Ile Asn Asp Ile Thr Gly
290 295 300
Ser Val Ser Glu Lys Lys Asn Pro Ile Met Ser Ile Asn Cys Ala Pro
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Asn Ser Lys Thr Thr Lys Asn Val Cys Asn Asn Leu Lys Gly Ser Asp
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Lys Ile Ser Tyr Cys Lys Gln His His His His His His
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Claims (3)

1. Thermophilic high-temperature-resistant polygalacturonaseMlPG28BThe method is characterized in that: the amino acid sequence is shown as SEQ ID NO. 1.
2. A thermophilic high temperature resistant polygalacturonase as claimed in claim 1MlPG28BThe coding gene of (1), wherein: the DNA sequence is shown in SEQ ID NO. 2.
3. A thermophilic high temperature resistant polygalacturonase as claimed in claim 1MlPG28BThe preparation method is characterized by comprising the following steps in sequence: constructing the gene shown as SEQ ID NO.3 on pPICZ alpha A eukaryotic expression vector, amplifying and culturing in Escherichia coli DH5 alpha, extracting plasmid and usingSacI, linearization is carried out, a linearization product is recovered from glue and is converted into pichia pastoris X-33 competent cells by electric shock, and then the pichia pastoris X-33 competent cells are coated on a solid YPDSZ culture medium containing 100 mu g/mL bleomycin and are cultured for 5 days at the temperature of 30 ℃; single colony strains on selection plates were scored at 300. mu.g-mL bleomycin YPD solid culture medium, selecting single colony strain for induced expression and purification, and obtaining recombinant thermophilic high temperature resistant polygalacturonase with amino acid sequence shown as SEQ ID NO.4MlPG28B
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CN104818260A (en) * 2015-04-17 2015-08-05 中国农业科学院饲料研究所 High temperature resistant chaetomium polygalacturonase mutant and encoding gene and application thereof
CN106047840A (en) * 2016-06-10 2016-10-26 北京盛拓达生物技术有限公司 Acid exo-polygalacturonase and gene and application thereof
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