CN113969268A - Glu/Leu/Phe/Val dehydrogenase mutant and application thereof in preparation of L-glufosinate-ammonium - Google Patents

Glu/Leu/Phe/Val dehydrogenase mutant and application thereof in preparation of L-glufosinate-ammonium Download PDF

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CN113969268A
CN113969268A CN202110475238.XA CN202110475238A CN113969268A CN 113969268 A CN113969268 A CN 113969268A CN 202110475238 A CN202110475238 A CN 202110475238A CN 113969268 A CN113969268 A CN 113969268A
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leu
val
ala
gly
glu
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王华磊
魏东芝
吴承骏
刘清海
张舰
罗中华
张长雷
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Ningxia Yongnong Biological Science Co ltd
YONGNONG BIOSCIENCES CO Ltd
East China University of Science and Technology
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Ningxia Yongnong Biological Science Co ltd
YONGNONG BIOSCIENCES CO Ltd
East China University of Science and Technology
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Publication of CN113969268A publication Critical patent/CN113969268A/en
Priority to PCT/CN2022/089831 priority patent/WO2022228506A1/en
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    • C12N9/0004Oxidoreductases (1.)
    • C12N9/0012Oxidoreductases (1.) acting on nitrogen containing compounds as donors (1.4, 1.5, 1.6, 1.7)
    • C12N9/0014Oxidoreductases (1.) acting on nitrogen containing compounds as donors (1.4, 1.5, 1.6, 1.7) acting on the CH-NH2 group of donors (1.4)
    • C12N9/0016Oxidoreductases (1.) acting on nitrogen containing compounds as donors (1.4, 1.5, 1.6, 1.7) acting on the CH-NH2 group of donors (1.4) with NAD or NADP as acceptor (1.4.1)
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    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/70Vectors or expression systems specially adapted for E. coli
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    • C12P41/00Processes using enzymes or microorganisms to separate optical isomers from a racemic mixture
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    • C12Y104/01Oxidoreductases acting on the CH-NH2 group of donors (1.4) with NAD+ or NADP+ as acceptor (1.4.1)
    • C12Y104/01005L-Amino-acid dehydrogenase (1.4.1.5)

Abstract

The application relates to a Glu/Leu/Phe/Val dehydrogenase mutant and application thereof in preparing L-glufosinate-ammonium. The Glu/Leu/Phe/Val dehydrogenase mutant, when aligned with the amino acid sequence of the Glu/Leu/Phe/Val dehydrogenase comprising the sequence shown in SEQ ID No.5, has an amino acid sequence comprising a substitution of the amino acid residue corresponding to position 91 and/or 168, said positions 91 and 168 being defined with reference to SEQ ID No.5, and has an amino acid sequence with at least 90% identity to the sequence shown in SEQ ID No. 5.

Description

Glu/Leu/Phe/Val dehydrogenase mutant and application thereof in preparation of L-glufosinate-ammonium
Technical Field
The present application relates to the field of biotechnology; in particular, the present application relates to a Glu/Leu/Phe/Val dehydrogenase mutant, the use of the Glu/Leu/Phe/Val dehydrogenase mutant for the preparation of L-glufosinate-ammonium, and a method for the preparation of L-glufosinate-ammonium using the Glu/Leu/Phe/Val dehydrogenase mutant.
Background
Glufosinate-ammonium (also known as bialaphos, glufosinate, trade names including baustda, bushatton, etc., known as phosphinothricin (abbreviated as PPT) and chemical name 2-amino-4- [ hydroxy (methyl) phosphono ] butanoic acid) is a low-toxicity, high-efficiency, non-selective contact-type organophosphorus herbicide developed by hester of germany (now belonging to bayer) in the 80 th 20 th century. Glutamine synthetase can be inhibited after glufosinate acts on plants, so that reversible reaction of glutamic acid in plants is interrupted, metabolic disturbance is caused, the plants are poisoned by excessive ammonia accumulation, and the plants cannot synthesize chlorophyll so that photosynthesis is inhibited, and the plants die. Glufosinate is mainly used in orchards, potato fields, non-cultivated lands and the like, and is used for preventing and treating annual and perennial grassy and dicotyledonous weeds, such as large crabgrass, green bristlegrass and wild wheat; perennial grassy weeds and sedges, such as fescue, duck sprouts, and the like.
The biocidal herbicide has a huge market. At present, three herbicides in the world are paraquat, glyphosate and glufosinate-ammonium respectively. In the aspect of market use, the glyphosate is exclusively used as a chelating agent, but due to long-term use, a large amount of weeds generate resistance, and the glyphosate also tends to lose effectiveness; due to its high toxicity, paraquat is listed in the "rotterdan convention", and is forbidden or restricted in more and more countries around the world, and the published bulletin by the ministry of agriculture in China shows that paraquat stops producing in 2014, 7 and 1, and is forbidden to use in 2016, 7 and 1; at present, the glufosinate-ammonium has excellent weeding performance and small phytotoxicity side effect although the yield is small, and therefore the glufosinate-ammonium has great market potential in a future period.
The glufosinate-ammonium has two optical isomers, namely L-glufosinate-ammonium and D-glufosinate-ammonium, but only L-type glufosinate-ammonium has herbicidal activity, is easy to decompose in soil, has low toxicity to human and animals, has a wide herbicidal spectrum, and has low damage to the environment.
Currently, glufosinate-ammonium is generally marketed as a racemic mixture. If the glufosinate-ammonium product can be used in the form of L-configuration pure optical isomer, the using amount of glufosinate-ammonium can be obviously reduced, and the method has important significance for improving atom economy, reducing use cost and relieving environmental pressure.
The main preparation method of chiral pure L-glufosinate-ammonium mainly comprises three steps: chiral resolution, chemical synthesis and biological catalysis.
Chiral resolution requires the use of an expensive chiral resolving agent (e.g., quinine), the resolution procedure is very complicated (e.g., steps of salt formation, induced crystallization, salt resolution, etc. are required), and the theoretical yield of the resolution is only 50%, which results in a low industrial value of this route.
The chemical synthesis methods include asymmetric synthesis methods and chiral source methods of natural amino acids, and the like, and have the disadvantages of requiring expensive noble metals and ligands or starting materials, requiring highly toxic substances for reaction routes, having long reaction synthesis routes, and the like.
The method for producing glufosinate-ammonium by a biological catalysis method has the advantages of strict stereoselectivity, mild reaction conditions, high yield and the like, and is an advantageous method for producing L-glufosinate-ammonium. The method mainly comprises the following two types: (1) the L-glufosinate-ammonium derivative is used as a substrate and is obtained by direct hydrolysis through an enzyme method, and the method has the main advantages that the conversion rate is high, the ee value of a product is high, and an expensive and difficultly obtained chiral raw material is used as a precursor; (2) the method takes a precursor of racemic glufosinate-ammonium as a substrate, and obtains the glufosinate-ammonium through selective resolution of enzyme, and has the main advantages that raw materials are relatively easy to obtain, the activity of a catalyst is high, but the theoretical yield can only reach 50%, and the waste of the raw materials is caused.
Besides the two traditional biocatalysis methods, the racemization-removing synthesis method taking D, L-glufosinate-ammonium as the raw material highlights huge cost advantages. Because the commercial glufosinate-ammonium is D, L-glufosinate-ammonium, the industrial production technology is mature, the racemization-removing synthesis method directly uses D, L-glufosinate-ammonium as a raw material, is simple and easy to obtain, has low cost, and can be well butted with the existing glufosinate-ammonium industrial production system.
Disclosure of Invention
The present application is based on the identification of Glu/Leu/Phe/Val dehydrogenase mutants which can be used to improve the bio-enzymatic production of L-glufosinate-ammonium.
In a first aspect, the present application relates to a Glu/Leu/Phe/Val dehydrogenase mutant having Glu/Leu/Phe/Val dehydrogenase activity, wherein the amino acid sequence of the Glu/Leu/Phe/Val dehydrogenase mutant comprises a substitution of an amino acid residue corresponding to position 91 and/or position 168 when compared to the amino acid sequence of a Glu/Leu/Phe/Val dehydrogenase comprising the sequence shown in SEQ ID No.5, said positions 91 and 168 being defined with reference to SEQ ID No.5, and the amino acid sequence of the Glu/Leu/Phe/Val dehydrogenase mutant has at least 90% identity to the sequence shown in SEQ ID No. 5.
In some embodiments, the substitution at amino acid residue 91 is V91I, i.e., the amino acid residue at position 91 is V to I. In some embodiments, the substitution of the amino acid residue at position 168 is N168G, i.e., the amino acid residue at position 168 is N to G.
In some embodiments, the Glu/Leu/Phe/Val dehydrogenase mutant comprises a V91I amino acid substitution when aligned with the amino acid sequence of a Glu/Leu/Phe/Val dehydrogenase comprising the sequence set forth in SEQ ID No.5, wherein the position of the amino acid is defined with reference to SEQ ID No. 5. In some embodiments, the Glu/Leu/Phe/Val dehydrogenase mutant comprises a N168G amino acid substitution when aligned with the amino acid sequence of a Glu/Leu/Phe/Val dehydrogenase comprising the sequence set forth in SEQ ID No.5, wherein the position of the amino acid is defined with reference to SEQ ID No. 5. In some embodiments, the Glu/Leu/Phe/Val dehydrogenase mutant comprises V91I and N168G amino acid substitutions when aligned with an amino acid sequence of a Glu/Leu/Phe/Val dehydrogenase comprising the sequence set forth in SEQ ID No.5, wherein the positions of the amino acids are defined with reference to SEQ ID No. 5.
The amino acid sequence of the Glu/Leu/Phe/Val dehydrogenase comprising the sequence indicated under SEQ ID NO.5 can be referred to in the present application as the wild-type enzyme having Glu/Leu/Phe/Val dehydrogenase activity. The nucleotide sequence of the wild-type enzyme can be the nucleotide sequence shown in SEQ ID NO. 10.
The Glu/Leu/Phe/Val dehydrogenase mutant described herein has Glu/Leu/Phe/Val dehydrogenase activity, i.e., activity of converting an α -keto acid precursor of a structurally similar amino acid such as glutamic acid/leucine/phenylalanine/valine into an L-amino acid, and particularly, the Glu/Leu/Phe/Val dehydrogenase or the mutant thereof described herein has activity of converting 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid (PPO for short) into L-glufosinate-ammonium.
"the position of the amino acid is defined with reference to SEQ ID NO. 5" means that the amino acid in the Glu/Leu/Phe/Val dehydrogenase mutant is aligned with a specific amino acid position (e.g., position 91, position 168) when aligned with the amino acid sequence of SEQ ID NO. 5.
The Glu/Leu/Phe/Val dehydrogenase mutants of the present application may have improved activity compared to the wild-type enzyme having Glu/Leu/Phe/Val dehydrogenase activity, e.g. have higher catalytic efficiency in the catalytic reaction of converting 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid to L-glufosinate, and optionally have better stability for use in the biocatalytic processes for the production of L-glufosinate, in particular the biocatalytic processes described herein, etc.
The term "catalytic efficiency" as used in the present application refers to the property of the Glu/Leu/Phe/Val dehydrogenase to allow its conversion of 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid to L-glufosinate. In one embodiment, the catalytic efficiency of the Glu/Leu/Phe/Val dehydrogenase mutants of the present application is enhanced compared to the wild-type or reference Glu/Leu/Phe/Val dehydrogenase. Preferably, the catalytic efficiency of the Glu/Leu/Phe/Val dehydrogenase mutant of the present application is at least 1.1, 1.2 or 1.3 times the catalytic efficiency of the wild-type or reference Glu/Leu/Phe/Val dehydrogenase.
In some embodiments, the Glu/Leu/Phe/Val dehydrogenase mutant is derived from Delftia acidovorans.
In some embodiments, the amino acid sequence of the Glu/Leu/Phe/Val dehydrogenase mutant is at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identical to the amino acid sequence set forth in SEQ ID No. 5. In some embodiments, the nucleotide sequence of the Glu/Leu/Phe/Val dehydrogenase mutant is at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identical to the nucleotide sequence set forth in SEQ ID No. 10. In some embodiments, the Glu/Leu/Phe/Val dehydrogenase mutant comprises an amino acid sequence having one or several (e.g., 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10) amino acid substitutions, deletions, and/or insertions as compared to the wild-type enzyme and/or one or more truncations as compared to the wild-type enzyme.
In some embodiments, the Glu/Leu/Phe/Val dehydrogenase mutant has an amino acid substitution at amino acid residue 91 and/or 168 when aligned with the amino acid sequence of a Glu/Leu/Phe/Val dehydrogenase comprising the sequence set forth in SEQ ID No. 5.
In a second aspect, the present application provides a nucleic acid or polynucleotide sequence comprising a sequence encoding the above Glu/Leu/Phe/Val dehydrogenase mutant. The nucleic acid or polynucleotide sequence may be isolated.
The term "nucleic acid" or "polynucleotide" is intended to include DNA molecules (e.g., cDNA or genomic DNA) and RNA molecules (e.g., mRNA) and analogs of the DNA or RNA generated using nucleotide analogs. The nucleic acid molecule may be single-stranded or double-stranded, but is preferably double-stranded DNA.
The features, definitions and preferences described in the first aspect apply equally to the second aspect.
In a third aspect, the present application provides an expression vector comprising the nucleic acid or polynucleotide sequence described above. The expression vector may comprise one or more control sequences operably linked to direct expression of the above-described Glu/Leu/Phe/Val dehydrogenase mutant in a suitable expression host.
The term "operably linked" refers to a linkage of polynucleotide elements (or coding sequences or nucleic acid sequences) in a functional relationship. A nucleic acid sequence is "operably linked" when it is placed into a functional relationship with another nucleic acid sequence. For example, a promoter or enhancer is operably linked to a coding sequence if it affects the transcription of the coding sequence. In some embodiments, the control sequences may include promoters, enhancers, terminators, and the like.
The expression vector may be any vector (e.g., a plasmid or virus) which can be conveniently subjected to recombinant DNA procedures and can bring about the expression of the polynucleotide of the Glu/Leu/Phe/Val dehydrogenase mutant. The choice of expression vector will generally depend on the compatibility of the vector with the cell into which the vector is to be introduced. The expression vector may exist as an extrachromosomal entity, a vector whose replication is independent of chromosomal replication, e.g., a plasmid, an extrachromosomal element, a minichromosome, or an artificial chromosome. Alternatively, the expression vector may be one which, when introduced into a host cell, is integrated into the genome and replicated together with the chromosome(s) into which it has been integrated.
More than one copy (e.g., 2, 3, or 4) of the expression vector of the present application can be inserted into a host cell to increase production (over-expression) of the Glu/Leu/Phe/Val dehydrogenase mutant encoded by the nucleic acid sequence contained within the expression vector.
In some embodiments, the expression vectors of the present application may further comprise nucleic acid sequences encoding formate dehydrogenase, glucose dehydrogenase or alcohol dehydrogenase to effect expression of these dehydrogenases with mutants, preferably with L-amino acid dehydrogenase mutants.
The features, definitions and preferences described in the first and second aspect apply equally to the third aspect.
In a fourth aspect, the present application provides a recombinant host cell comprising a nucleic acid as described herein or an expression vector as described herein.
In some embodiments, the recombinant host cell may be a prokaryotic or eukaryotic cell. In some embodiments, the host cell is of the genus Saccharomyces (Saccharomyces), Aspergillus (Aspergillus), Pichia (Pichia), Kluyveromyces (Kluyveromyces), Candida (Candida), Hansenula (Hansenula), Humicola (Humicola), Issatchenkia (Issatchenkia), trichosporus (trichosporin), Brettanomyces (Brettanomyces), Pachysolen (Pachysolen), Yarrowia (Yarrowia), Actinomycetes (Actinomycetes), Streptomyces (Streptomyces), Bacillus (Bacillus), or Escherichia (Escherichia); preferably one of Saccharomyces cerevisiae (Saccharomyces cerevisiae), Yarrowia lipolytica (Yarrowia lipolytica), Candida krusei (Candida krusei), Issatchenkia orientalis, Bacillus subtilis (Bacillus subtilis) or Escherichia coli (Escherichia coli).
The expression vectors of the present application can be introduced into prokaryotic or eukaryotic cells by conventional transformation or transfection techniques. As used herein, the terms "transformation" and "transfection" are intended to refer to a variety of art-recognized techniques for introducing foreign nucleic acids (e.g., DNA) into host cells that are well known to those of skill in the art. Suitable Methods for transforming or transfecting host cells can be found in Sambrook et al (Molecular Cloning: A Laboratory Manual, 2 nd edition, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY,1989), Davis et al, Basic Methods in Molecular Biology (1986) and other Laboratory manuals.
In some embodiments, the recombinant host cell is a host cell that co-expresses (a) an L-amino acid dehydrogenase having 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid activity and (b) a dehydrogenase selected from a formate dehydrogenase, a glucose dehydrogenase, or an alcohol dehydrogenase.
The features, definitions and preferences described in the first, second and third aspect apply equally to the fourth aspect.
In a fifth aspect, the present application provides the use of a Glu/Leu/Phe/Val dehydrogenase mutant, nucleic acid, expression vector or recombinant host cell as described herein for the preparation of L-glufosinate-ammonium.
The features, definitions and preferences described in the first, second, third and fourth aspects apply equally to the fifth aspect.
In a sixth aspect, the present application provides a method for preparing L-glufosinate, comprising converting D-glufosinate to L-glufosinate in the presence of an enzymatic catalytic system comprising a Glu/Leu/Phe/Val dehydrogenase mutant for converting 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid to L-glufosinate.
In some embodiments, the D-glufosinate is initially present in a racemic mixture of D-and L-glufosinate, or salts thereof. The racemic phosphinothricin starting material may be provided in a variety of forms. Various salts of racemic phosphinothricin, such as ammonium salts and hydrochloride salts, or zwitterions may be used.
In some embodiments, the enzymatic catalytic system further comprises a D-amino acid oxidase for converting D-glufosinate of the D, L-glufosinate to 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid. The D-amino acid oxidase may be any enzyme known in the art having D-amino acid oxidase activity or a variant thereof. For example, D-amino acid oxidases as described in CN107502647B, CN111019916B, CN 111321193B.
In some embodiments, the enzymatic catalytic system further comprises a catalase. The catalase is used to remove the by-product hydrogen peroxide, as hydrogen peroxide accumulation can have a deleterious effect on the enzyme catalyst. The catalase may be any enzyme known in the art having a catalase activity, for example, catalase available from Ningxia Severe industries group Co., Ltd under the trade designation CAT-400.
In some embodiments, the enzymatic catalytic system further comprises a coenzyme cycling system selected from at least one of:
(1) formate dehydrogenase coenzyme circulation system: including formate dehydrogenase, formate and coenzymes;
(2) glucose dehydrogenase coenzyme circulation system: including glucose dehydrogenase, glucose and coenzymes;
(3) alcohol dehydrogenase coenzyme cycling system: including alcohol dehydrogenases, isopropanol and coenzymes.
In some preferred embodiments, the coenzyme is NADH.
The Formate Dehydrogenase (FDH) described herein can be any enzyme or enzyme variant known in the art having formate dehydrogenase activity. In some embodiments, the formate dehydrogenase is derived from Lactobacillus buchneri. In some embodiments, the amino acid sequence of the formate dehydrogenase has at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity to the amino acid sequence set forth in SEQ ID No. 2. In some embodiments, the nucleotide sequence of the formate dehydrogenase has at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity to the nucleotide sequence set forth in SEQ ID No. 7.
The Glucose Dehydrogenase (GDH) described herein can be any enzyme or enzyme variant having glucose dehydrogenase activity known in the art. In some embodiments, the glucose dehydrogenase is derived from Exiguobacterium sibiricum. In some embodiments, the amino acid sequence of the glucose dehydrogenase has at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity to the amino acid sequence set forth in SEQ ID No. 3. In some embodiments, the nucleotide sequence of the glucose dehydrogenase has at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity to the nucleotide sequence set forth in SEQ ID No. 8.
The Alcohol Dehydrogenase (ADH) described herein can be any enzyme or enzyme variant known in the art having alcohol dehydrogenase activity. In some embodiments, the alcohol dehydrogenase is derived from Lactobacillus brevis. In some embodiments, the amino acid sequence of the alcohol dehydrogenase has at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity to the amino acid sequence set forth in SEQ ID No. 4. In some embodiments, the nucleotide sequence of the alcohol dehydrogenase has at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity to the nucleotide sequence set forth in SEQ ID No. 9.
The enzyme described herein (e.g., Glu/Leu/Phe/Val dehydrogenase mutant, D-amino acid oxidase, catalase, formate dehydrogenase, glucose dehydrogenase, or alcohol dehydrogenase) can be in the form of a purified enzyme; a partially purified enzyme; a cell-free extract or a crude cell extract; liquid, powder or fixed form; permeabilized cells, whole cells or whole fermentation broth containing the enzyme or any other suitable form. In some embodiments, the form of each enzyme in the enzymatic catalytic system is each independently selected from: free enzymes and recombinant host cells expressing enzymes.
In some embodiments, wherein the recombinant host cells expressing enzymes are each independently selected from the group consisting of: saccharomyces (Saccharomyces), Aspergillus (Aspergillus), Pichia (Pichia), Kluyveromyces (Kluyveromyces), Candida (Candida), Hansenula (Hansenula), Humicola (Humicola), Issatchenkia (Issatchenkia), Trichosporon (Trichosporon), Brettanomyces (Brettanomyces), Pachysolen (Pachysolen), Yarrowia (Yarrowia), Actinomycetes (Actinomycetes), Streptomyces (Streptomyces), Bacillus (Bacillus) or Escherichia (Escherichia); for example from Saccharomyces cerevisiae (Saccharomyces cerevisiae), Yarrowia lipolytica (Yarrowia lipolytica), Candida krusei (Candida krusei), Issatchenkia orientalis, Bacillus subtilis (Bacillus subtilis) or Escherichia coli (Escherichia coli).
In some embodiments, the conversion reaction is carried out in a reaction solution. Preferably, the reaction solution has a pH of 7 to 10, preferably 8 to 9. In the reaction solution having a pH of 7 to 10, it is preferable to carry out the reaction in the reaction solution having a pH of 8 to 9, whereby more excellent reaction efficiency can be obtained.
The method described in the present application may include: a step a) in which an oxidation reaction catalyzed by the D-amino acid oxidase takes place and a step b) in which a reductive amination reaction catalyzed by the Glu/Leu/Phe/Val dehydrogenase mutant takes place.
In some embodiments, the temperature of the oxidation reaction of step a) is from 25 to 45 ℃, e.g., from 30 to 45 ℃, from 35 to 45 ℃, and the like; the time period is 6 to 24 hours, such as 6 to 12 hours, 12 to 24 hours, such as 6 hours, 12 hours, and the like.
In step b), the PPO generated in step a) is catalytically reduced into L-glufosinate-ammonium by L-amino acid dehydrogenase, so that in-situ racemization of D, L-glufosinate-ammonium is realized, and L-glufosinate-ammonium with ee value more than 99% is obtained. In some embodiments, the reaction system of step b) further comprises coenzyme NADH. In some embodiments, the molar ratio of NADH to substrate is from 1:10 to 1: 5000. In some embodiments, NADH is added in an amount of 0.1 to 2mM on a molar basis; more preferably 0.5 mM.
In some embodiments, the temperature of the reductive amination reaction of step b) is from 25 to 45 ℃, e.g., from 30 to 45 ℃, from 35 to 45 ℃, and the like; the time period is 6 to 24 hours, such as 6 to 12 hours, 12 to 24 hours, such as 6 hours, 12 hours, and the like.
In some embodiments, in step b), the molar ratio of inorganic ammonium donor to substrate at the start of the reaction is from 1:1 to 10: 1.
In some embodiments, in step b), the inorganic ammonium donor may be ammonium phosphate, ammonium chloride, ammonium sulfate, ammonium formate, ammonium acetate, aqueous ammonia; preferably, the inorganic ammonium donor can be ammonium phosphate, ammonium formate, aqueous ammonia; more preferably, the inorganic ammonium donor may be aqueous ammonia.
The processes described herein can be carried out in one or more reaction vessels. Preferably, the process described herein is carried out in one reaction vessel (i.e., "one-pot two-step process").
In some preferred embodiments, the D-amino acid oxidase used in step a) is expressed by a first recombinant microorganism. Thus, step a) may comprise: subjecting D-glufosinate-ammonium to an oxidation reaction in the presence of a first recombinant microorganism and oxygen to obtain 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid. The use of said first recombinant microorganism enables a higher catalytic efficiency to be conferred to the process of the present application. The first recombinant microorganism can be constructed using any method known in the art. For example, the first recombinant microorganism can be constructed as follows: constructing a recombinant expression vector containing the D-amino acid oxidase gene, transforming the recombinant expression vector into a microorganism, performing induction culture on the obtained recombinant microorganism, and separating a culture solution to obtain a first recombinant microorganism containing the D-amino acid oxidase gene. Preferably, the addition amount of the first recombinant microorganism is 1g/L-200g/L of reaction liquid according to the wet weight of the thallus after centrifugation for 10min at 10000 rpm; more preferably, 10g/L to 100g/L of the reaction solution; most preferably, it is 30g/L of the reaction solution.
In some preferred embodiments, the Glu/Leu/Phe/Val dehydrogenase mutant used in step b) and the enzyme for coenzyme cycle are co-expressed by a second recombinant microorganism. Thus, step b) may comprise: subjecting the 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid obtained in step a) to a reductive amination reaction in the presence of a second recombinant microorganism co-expressing a Glu/Leu/Phe/Val dehydrogenase mutant and an enzyme for coenzyme cycle (e.g. formate dehydrogenase, glucose dehydrogenase or alcohol dehydrogenase) and an inorganic ammonium salt to give L-glufosinate. The use of said second recombinant microorganism enables a higher catalytic efficiency to be conferred to the process of the present application. The second recombinant microorganism can be constructed using any method known in the art. For example, the second recombinant microorganism can be constructed as follows: constructing a recombinant expression vector containing the Glu/Leu/Phe/Val dehydrogenase mutant and a gene of an enzyme for coenzyme cycle, transforming the recombinant expression vector into a microorganism, carrying out induction culture on the obtained recombinant microorganism, and separating a culture solution to obtain a second recombinant microorganism containing the Glu/Leu/Phe/Val dehydrogenase mutant and the gene of the enzyme for coenzyme cycle. Preferably, the addition amount of the second recombinant microorganism is 1g/L-200g/L of reaction liquid according to the wet weight of the thallus after centrifugation for 10min at 10000 rpm; more preferably, 3g/L to 100g/L of the reaction solution; most preferably, it is 30g/L of the reaction solution.
The first and second recombinant microorganisms may be any engineered bacteria suitable for enzyme expression. In some embodiments, the first and second recombinant microorganisms each independently belong to one of the following genera: saccharomyces (Saccharomyces), Aspergillus (Aspergillus), Pichia (Pichia), Kluyveromyces (Kluyveromyces), Candida (Candida), Hansenula (Hansenula), Humicola (Humicola), Issatchenkia (Issatchenkia), Trichosporon (Trichosporon), Brettanomyces (Brettanomyces), Pachysolen (Pachysolen), Yarrowia (Yarrowia), Actinomycetes (Actinomycetes), Streptomyces (Streptomyces), Bacillus (Bacillus) or Escherichia (Escherichia). In some preferred embodiments, the first and second recombinant microorganisms are each independently selected from the group consisting of Saccharomyces cerevisiae (Saccharomyces cerevisiae), Yarrowia lipolytica (Yarrowia lipolytica), Candida krusei (Candida kruseii), Issatchenkia orientalis, Bacillus subtilis (Bacillus subtilis), and Escherichia coli (Escherichia coli). In some more preferred embodiments, the first and second recombinant microorganisms are both E.coli.
The yield of the methods of the present application can be measured by any method known in the art. For example, the two configuration contents of the obtained glufosinate-ammonium product can be measured by chiral HPLC. In some embodiments, the enantiomeric excess (e.e.) of the L-glufosinate product obtained is at least 99% (relative to D-glufosinate, the same below). In some embodiments, the L-glufosinate product is obtained in a yield of at least 95%, 96% or 97%.
The capital letters of the invention represent amino acids as are well known to those skilled in the art and, according to the application, represent the corresponding amino acid residues herein.
The experimental methods in the present invention are conventional methods unless otherwise specified, and the gene cloning procedures can be specifically described in molecular cloning protocols, compiled by J. Sambruka et al.
Description of the sequence listing:
SEQ ID NO.1 is the amino acid sequence annotated as D-amino acid oxidase (DAAO) derived from Microbotryum intermedium.
SEQ ID NO.2 is the amino acid sequence annotated as Formate Dehydrogenase (FDH) from Lactobacillus buchneri.
SEQ ID NO.3 is an amino acid sequence annotated as Glucose Dehydrogenase (GDH) derived from Exiguobacterium sibiricum.
SEQ ID NO.4 is the amino acid sequence from Lactobacillus brevis annotated as Alcohol Dehydrogenase (ADH).
SEQ ID NO.5 is the amino acid sequence derived from Delftia acididovarans annotated as Glu/Leu/Phe/Val dehydrogenase.
SEQ ID NO.6 is a nucleotide sequence annotated as D-amino acid oxidase (DAAO) derived from Microbotryum intermedium.
SEQ ID NO.7 is a nucleotide sequence annotated as Formate Dehydrogenase (FDH) derived from Lactobacillus buchneri.
SEQ ID NO.8 is a nucleotide sequence annotated as Glucose Dehydrogenase (GDH) derived from Exiguobacterium sibiricum.
SEQ ID NO.9 is a nucleotide sequence from Lactobacillus brevis annotated as Alcohol Dehydrogenase (ADH).
SEQ ID NO.10 is a nucleotide sequence derived from Delftia acididovarans annotated as Glu/Leu/Phe/Val dehydrogenase.
The Glu/Leu/Phe/Val dehydrogenase mutant enables a reaction system to have better catalytic efficiency, when PPO is used as a substrate to perform catalytic reaction, the conversion rate is far higher than that of a wild type, and the yield of L-glufosinate-ammonium is greatly improved.
Drawings
FIG. 1 schematically shows the reaction scheme for producing L-glufosinate by the multi-enzyme system resolution method adopted in the method of the present application.
FIG. 2 schematically shows the reaction scheme (glucose dehydrogenase coenzyme cycling system) for the racemization synthesis of L-glufosinate-ammonium.
FIG. 3 schematically shows the reaction scheme for the racemization synthesis of L-glufosinate-ammonium (formate dehydrogenase coenzyme cycling system).
FIG. 4 illustrates the progress of the two-strain multi-enzyme one-pot two-step deracemization reaction for the preparation of L-glufosinate-ammonium.
Detailed Description
Examples
Materials and methods
Reagents used in upstream genetic engineering: the genome extraction kit, the plasmid extraction kit and the DNA purification and recovery kit used in the examples were purchased from Kangning Life sciences (Wujiang) Co., Ltd.; the one-step cloning kit was purchased from nuozokenza co ltd; coli BL21(DE3), plasmid pET-28a (+) and the like were purchased from Shanghai Xuan Guangzi Biotech development Co., Ltd; DNA markers, low molecular weight standard proteins, protein pre-gels were purchased from GenStar, Beijing; the Clonexpress II One Step Cloning Kit seamless Cloning Kit was purchased from Nanjing Novophilia Biotech GmbH; pfu DNA polymerase and Dpn I endonuclease were purchased from Saimer Feishell science and technology (China); primer synthesis and sequence sequencing are completed by Hangzhou Zhikexi biotechnology limited, and whole gene synthesis is completed by Biotechnology engineering (Shanghai) limited. The method of using the above reagent is referred to the commercial specification.
The reagent 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid (PPO) used in the downstream catalytic process is from Yongnong bioscience, Inc.; d, L-glufosinate-ammonium is from Yongnong bioscience, Inc.; other commonly used reagents are available from the national pharmaceutical group chemical agents, ltd.
In the examples, the progress of the reaction was detected by High Performance Liquid Chromatography (HPLC), and PPO was analyzed. The HPLC analysis method comprises the following steps: a chromatography column PBR; column temperature/30 ℃; flow rate/1 mL/min; detection wavelength/210 nm; mobile phase: 5mM (NH)4)2HPO4
Detecting the contents of two configurations of glufosinate-ammonium by a chiral HPLC analysis method, wherein the chiral HPLC analysis method comprises the following steps: column/OA-5000L; mobile phase/0.5 g/L ammonium copper sulfate pentahydrate solution, and 0.3% v/v acetonitrile; detection wavelength/254 nm; flow rate/1 mL/min; column temperature/35 ℃.
Example 1: construction of genetically engineered bacteria
After the whole gene synthesis of the gene sequence of D-amino acid oxidase (DAAO, GenBank number: FMSP01000004.1, amino acid sequence shown in SEQ ID NO.1, and nucleotide sequence shown in SEQ ID NO. 6) derived from Microbotryum intermedium, pET-28a (+) was inserted into the expression plasmid to obtain pET-28 a-DAAO. After sequencing verification, pET-28a-daao is transferred into an expression host Escherichia coli E.coli BL21(DE3) for subsequent expression of the recombinase.
After the complete gene synthesis of the sequence of formic acid dehydrogenation (FDH) derived from Lactobacillus buchneri (the amino acid sequence is shown in SEQ ID NO.2 and the nucleotide sequence is shown in SEQ ID NO. 7), the sequence is inserted into an expression plasmid pET-28a (+) to obtain pET-28 a-FDH. After sequencing verification, pET-28a-fdh is transferred into an expression host escherichia coli E.coli BL21(DE3) for subsequent expression of recombinase.
After the whole gene synthesis of a sequence (amino acid sequence is shown in SEQ ID NO.3 and nucleotide sequence is shown in SEQ ID NO. 8) of Glucose Dehydrogenase (GDH) derived from Exiguobacterium sibiricum, an expression plasmid pET-28a (+) is inserted to obtain pET-28 a-GDH. After sequencing verification, pET-28a-gdh is transferred into an expression host escherichia coli E.coli BL21(DE3) for subsequent expression of recombinase.
After the whole gene synthesis of the sequence of Alcohol Dehydrogenase (ADH) derived from Lactobacillus brevis (amino acid sequence is shown in SEQ ID NO.4 and nucleotide sequence is shown in SEQ ID NO. 9), the sequence was inserted into expression plasmid pET-28a (+), and pET-28a-ADH was obtained. After sequencing verification, pET-28a-adh is transferred into an expression host escherichia coli E.coli BL21(DE3) for subsequent expression of recombinase.
The gene sequence of Glu/Leu/Phe/Val dehydrogenase (GenBank number: WP-012202150.1, amino acid sequence shown in SEQ ID NO.5, and nucleotide sequence shown in SEQ ID NO. 10) derived from Delftia acidovans was subjected to whole gene synthesis, and inserted into expression plasmid pET-28a (+) to obtain plasmid pET-28 a-laadh. After being sequenced and verified to be correct, the recombinant DNA is transferred into an expression host Escherichia coli E.coli BL21(DE3) for subsequent expression of recombinase.
Example 2: culture of engineered bacteria
Recombinant Escherichia coli E.coli BL21(DE3)/pET-28a-DAAO, E.coli BL21(DE3)/pET-28a-LAADH, E.coli BL21(DE3)/pET-28a-FDH, E.coli BL21(DE3)/pET-28a-GDH and E.coli BL21(DE3)/pET-28a-ADH were subjected to plate streaking activation, and then single colonies were picked and inoculated into 10mL LB liquid medium containing 50. mu.g/mL kanamycin, and shake-cultured at 37 ℃ for 10 hours. The cells were inoculated at 2% into 50mL of LB liquid medium containing 50. mu.g/mL of kanamycin, shake-cultured at 37 ℃ until OD600 reached about 0.8, and then IPTG was added thereto to a final concentration of 0.1mM, and shake-cultured at 25 ℃ for 12 hours. After the culture is finished, the culture solution is centrifuged for 10min at 8000rpm, the supernatant is discarded, and the thalli are collected and stored in an ultra-low temperature refrigerator at minus 80 ℃ for later use.
Example 3: construction of D-amino acid oxidase (DAAO) mutant (62-position, 226-position)
Position 62 and/or 226 (in particular F62K, M226T) were mutated on the basis of the wild-type DAAO sequence described in example 1. The primer sequences for PCR were designed for the mutants mutated at positions 62 and 226 of the mutated D-amino acid oxidase sequence, as shown in Table 1:
TABLE 1
Serial number Name of the lead Primer sequences
1 F62KF gattcttgcgggtccaccttggggcaccagttcgctc
2 F62KR gagcgaactggtgccccaaggtggacccgcaagaatc
3 M226TF ggggtctgacgcatcggtagtgcacagcttgac
4 M226TR gtcaagctgtgcactaccgatgcgtcagacccc
The PCR (25. mu.L) amplification system was as follows:
pfu buffer 12.5. mu.L, primer 2. mu.L, template plasmid 1. mu.L, dNTP 0.5. mu.L, Pfu 1. mu.L, ddH was added2Make up to 25. mu.L of O.
PCR amplification conditions:
(1) pre-denaturation at 95 ℃ for 3min, (2) denaturation at 95 ℃ for 30 sec, (3) annealing at 65 ℃ for 30 sec, (4) extension at 72 ℃ for 5min for 20 cycles, (5) extension at 72 ℃ for 10min, and (6) storage at 4 ℃.
And after PCR, taking 5 mu L of the amplified product to carry out nucleic acid gel electrophoresis analysis, obtaining a clear target band, adding 0.5 mu L of Dpn I endonuclease into the residual product, and digesting the template DNA at 37 ℃ for 3 h.
After completion of the reaction, the cells were transformed into BL21 competent cells, plated on LB solid medium containing 50. mu.g/mL of kanamycin, and cultured overnight at 37 ℃. And selecting a single colony to obtain a mutant transformant. Bacterial cells were obtained as described in example 2.
Example 4: construction of Glu/Leu/Phe/Val dehydrogenase mutants (positions 91 and 168)
Positions 91 and 168 (in particular V91I, N168G) were mutated on the basis of the wild-type LAADH sequence described in example 1. Primer sequences were designed for mutant PCR with mutations at positions 91 and 168 of the mutated LAADH sequence, as shown in table 2:
TABLE 2
Serial number Name of the lead Primer sequences
1 V91IF cctggtggaaacggatgccgcccttgccg
2 V91IR cggcaagggcggcatccgtttccaccagg
3 N168GF gggtccgaagaatcggtcgtgcagcgcttgc
4 N168GR gcaagcgctgcacgaccgattcttcggaccc
The PCR amplification system and conditions were the same as those described in example 3.
After completion of the reaction, the cells were transformed into BL21 competent cells, plated on LB solid medium containing 50. mu.g/mL of kanamycin, and cultured overnight at 37 ℃. And selecting a single colony to obtain a mutant transformant. Bacterial cells were obtained as described in example 2.
Example 5: comparison of enzyme activities of Glu/Leu/Phe/Val dehydrogenase mutants
The catalytic efficiency of L-amino acid dehydrogenase was compared with that of its mutant by measuring the consumption of PPO. When only L-amino acid dehydrogenase and the mutant exist, the reaction system is as follows: 250mM PPO, 100mM phosphate buffer solution with pH8.0, 300mM glucose, 10g/L L-amino acid dehydrogenase or mutant freeze-dried cells thereof and 10g/L glucose dehydrogenase freeze-dried cells. After 24h of reaction, a sample of the reaction solution was taken for work-up, the concentration of L-PPT was determined by HPLC and the conversion (concentration of product L-PPT/concentration of initial substrate PPO. times.100%) was calculated.
TABLE 3
Figure BDA0003047178270000151
As can be seen from Table 3, the resulting mutants all had higher conversion than the wild-type LAADH. The LAADH mutant 4 with the highest conversion rate is the LAADH mutant 4, the 91 th V mutation of the mutation site is I, and the 168 th N mutation is G.
Example 6: construction of LAADH-expressing Strain
Construction of expression strain containing glucose dehydrogenase coenzyme circulating system
The plasmid pET-28a-LAADH V91I-N168G-GDH was constructed by ligating a glucose dehydrogenase gene fragment to a multiple cloning site with Hind III by a seamless cloning kit in the pET-28a-LAADH V91I-N168G, and the expression strain E.coli BL21(DE3)/pET-28a-LAADH V91I-N168G-GDH was constructed.
Secondly, construction of expression strain containing formate dehydrogenase coenzyme circulating system
A formate dehydrogenase gene fragment is connected to a multiple cloning site on a vector pET-28a-LAADH V91I-N168G through a seamless cloning kit, the enzyme cutting site is Hind III, a plasmid pET-28a-LAADH V91I-N168G-FDH is constructed, and an expression strain E.coli BL21(DE3)/pET-28a-LAADH V91I-N168G-FDH is constructed.
Construction of expression strain for alcohol dehydrogenase coenzyme circulation system
On a vector pET-28a-LAADH V91I-N168G, an alcohol dehydrogenase gene fragment is connected to a multiple cloning site through a seamless cloning kit, the enzyme cutting site is Hind III, a plasmid pET-28a-LAADH V91I-N168G-ADH is constructed, and an expression strain E.coli BL21(DE3)/pET-28a-LAADH V91I-N168G-ADH is constructed.
Example 7: preparation of L-glufosinate-ammonium (coenzyme circulation system containing glucose dehydrogenase GDH) by dual-bacterium multi-enzyme racemization removal
A strain capable of expressing D-amino acid oxidase E.coli BL21(DE3)/pET-28a-DAAO F62K-M226 and an expression strain capable of expressing L-amino acid dehydrogenase and glucose dehydrogenase E.coli BL21(DE3)/pET-28a-LAADH V91I-N168G-GDH were cultured in accordance with the procedure of example 2, and the cells were collected by centrifugation and lyophilized.
600mL of ammonium phosphate buffer (pH8.0, 100mM) containing 400mM D, L-PPT, 8000U/L catalase, 5% (V/V) antifoaming agent, 20g/L E.coli BL21(DE3)/pET-28a-DAAO F62K-M226 cells, 20g/L E.coli BL21(DE3)/pET-28a-LAADH V91I-N168G-GDH cells, 0.5mM NADH and 250mM glucose was charged into a 1L reactor, and air was passed through the reactor at an aeration rate of 2L/min, followed by addition of ammonia water to control pH8 and a temperature of 30 ℃ for 24 hours. After the reaction is finished, the liquid phase detection shows that the L-PPT is 388mM, the e.e. value of the product L-glufosinate-ammonium is more than 99%, and the conversion yield of the L-PPT is 97%.
Example 8: preparation of L-glufosinate-ammonium (containing formate dehydrogenase FDH coenzyme circulating system) by double-bacterium multienzyme racemization removal
A strain capable of expressing D-amino acid oxidase E.coli BL21(DE3)/pET-28a-DAAO F62K-M226 and an expression strain capable of expressing L-amino acid dehydrogenase and formate dehydrogenase E.coli BL21(DE3)/pET-28a-LAADH V91I-N168G-FDH were cultured in the same manner as in example 2, and the cells were collected by centrifugation and lyophilized.
600mL of ammonium phosphate buffer (pH8.0, 100mM) containing 400mM D, L-PPT, 8000U/L catalase, 5% (V/V) antifoaming agent, 20g/L E.coli BL21(DE3)/pET-28a-DAAO F62K-M226 lyophilized cells, 20g/L E.coli BL21(DE3)/pET-28a-ADH V91I-N168G-FDH lyophilized cells, 0.5mM NADH and 250mM were charged into a 1L reactor, and air was passed through the reactor with a 2L ammonium formate/min aeration rate, and ammonia water was controlled to have a pH of 8 at 30 ℃ for 24 hours. After the reaction is finished, the liquid phase detection shows that the L-PPT content is 382mM, the e.e. value of the product L-glufosinate-ammonium is more than 99%, and the conversion yield of the L-PPT is 95.5%.
Example 9: preparation of L-glufosinate-ammonium (alcohol dehydrogenase ADH coenzyme circulation system) by double-bacterium multienzyme racemization removal
A strain capable of expressing D-amino acid oxidase E.coli BL21(DE3)/pET-28a-DAAO F62K-M226 and an expression strain capable of expressing L-amino acid dehydrogenase and alcohol dehydrogenase E.coli BL21(DE3)/pET-28a-LAADH V91I-N168G-ADH were cultured in accordance with the method of example 2, and the cells were collected by centrifugation and lyophilized.
A1L reactor was charged with 600mL of a reaction solution (pH8.0 adjusted with aqueous ammonia) containing 400mM D, L-PPT, 8000U/L catalase, 0.5% (V/V) antifoaming agent, 20g/L E.coli BL21(DE3)/pET-28a-DAAO F62K-M226 lyophilized cells, 20g/L E.coli BL21(DE3)/pET-28a-LAADH V91I-N168G-ADH lyophilized cells, 0.5mM NADH and 250mM isopropanol, and air was blown into the reactor to have an air flow of 2L/min, and the aqueous ammonia was controlled to have a pH of 8 and a temperature of 30 ℃ for 24 hours. The liquid phase detection method shown in the examples was used to detect the consumption of D-glufosinate-ammonium and the production of L-glufosinate-ammonium during the reaction, and the reaction progress curve is shown in FIG. 4. The graph shows that the concentration of D-glufosinate gradually decreases and the concentration of L-glufosinate gradually increases over time. After the reaction is finished, the liquid phase detection shows that the L-PPT content is 380mM, the e.e. value of the product L-glufosinate-ammonium is more than 99%, and the conversion yield of the L-PPT is 95%.
It should be understood that the above examples are only for clarity of illustration and are not intended to limit the embodiments. Other variations and modifications will be apparent to persons skilled in the art in light of the above description. And are neither required nor exhaustive of all embodiments. And obvious variations or modifications therefrom are within the scope of the invention.
Sequence listing
<110> Wingnong bioscience, Ltd
East China University of Technology
Ningxia Yongnong Biological Science Co., Ltd.
<120> Glu/Leu/Phe/Val dehydrogenase mutant and application thereof in preparation of L-glufosinate-ammonium
<130> PD210084N
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<170> PatentIn version 3.5
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Thr Ile Cys Val Thr Leu Ala Ser Ala Gly Ser Leu Pro Ala Thr Gly
225 230 235 240
Ser Gly Pro Val Val Ala Gly Gly Thr Thr Ala Gly
245 250
<210> 5
<211> 434
<212> PRT
<213> Delftia acidovorans
<400> 5
Met Gln Gln Pro Ala Ser Ala Gly Val Thr Asn His Ala Ile Pro Ser
1 5 10 15
Tyr Leu Gln Ala Asp His Leu Gly Pro Trp Gly Asn Tyr Leu Gln Gln
20 25 30
Val Asp Arg Val Thr Pro Tyr Leu Gly His Leu Ala Arg Trp Val Glu
35 40 45
Thr Leu Lys Arg Pro Lys Arg Ile Leu Ile Val Asp Val Pro Ile Glu
50 55 60
Leu Asp Asn Gly Thr Ile Ala His Tyr Glu Gly Tyr Arg Val Gln His
65 70 75 80
Asn Leu Ser Arg Gly Pro Gly Lys Gly Gly Val Arg Phe His Gln Asp
85 90 95
Val Thr Leu Ser Glu Val Met Ala Leu Ser Ala Trp Met Ser Val Lys
100 105 110
Asn Ala Ala Val Asn Val Pro Tyr Gly Gly Ala Lys Gly Gly Ile Arg
115 120 125
Val Asp Pro Lys Thr Leu Ser Arg Gly Glu Leu Glu Arg Leu Thr Arg
130 135 140
Arg Tyr Thr Ser Glu Ile Gly Leu Leu Ile Gly Pro Ser Lys Asp Ile
145 150 155 160
Pro Ala Pro Asp Val Asn Thr Asn Gly Gln Ile Met Ala Trp Met Met
165 170 175
Asp Thr Tyr Ser Met Asn Thr Gly Ala Thr Ala Thr Gly Val Val Thr
180 185 190
Gly Lys Pro Val Asp Leu Gly Gly Ser Leu Gly Arg Val Glu Ala Thr
195 200 205
Gly Arg Gly Val Phe Thr Val Gly Val Glu Ala Ala Lys Leu Thr Gly
210 215 220
Leu Ser Val Gln Gly Ala Arg Ile Ala Val Gln Gly Phe Gly Asn Val
225 230 235 240
Gly Gly Thr Ala Gly Lys Leu Phe Ala Asp Val Gly Ala Lys Val Val
245 250 255
Ala Val Gln Asp His Thr Gly Thr Ile His Asn Ala Asn Gly Leu Asp
260 265 270
Val Pro Ala Leu Leu Ala His Val Ala Ala Lys Gly Gly Val Gly Gly
275 280 285
Phe Asp Gly Ala Glu Ala Met Asp Ala Ala Asp Phe Trp Ser Val Asp
290 295 300
Cys Asp Ile Leu Ile Pro Ala Ala Leu Glu Gly Gln Ile Thr Lys Glu
305 310 315 320
Asn Ala Gly Lys Ile Lys Ala Lys Met Val Ile Glu Gly Ala Asn Gly
325 330 335
Pro Thr Thr Thr Glu Ala Asp Asp Ile Leu Thr Glu Lys Gly Val Leu
340 345 350
Val Leu Pro Asp Val Leu Ala Asn Ala Gly Gly Val Thr Val Ser Tyr
355 360 365
Phe Glu Trp Val Gln Asp Phe Ser Ser Phe Phe Trp Ser Glu Asp Glu
370 375 380
Ile Asn Ala Arg Leu Val Arg Ile Met Gln Asp Ala Phe Ala Ala Ile
385 390 395 400
Trp Gln Val Ala Gln Gln His Gly Val Thr Leu Arg Thr Ala Thr Phe
405 410 415
Ile Val Ala Cys Gln Arg Ile Leu His Ala Arg Glu Met Arg Gly Leu
420 425 430
Tyr Pro
<210> 6
<211> 1155
<212> DNA
<213> Microbotryum intermedium
<400> 6
atgtcgtcaa gcacttcatc cgacaagcaa gtcgtcgtca ttggtgctgg tgttattggc 60
ctcacgtcgg cgctcgttct cgcgcagtcg aaccacaacg tcaccctcgt cgctcgggat 120
ctcccctcgg atgtatcgtc ccaagcgttt gcctcacctt gggccggagc gaactggtgc 180
ccctttgtgg acccgcaaga atcggtcaag aacaagagga tctgcgactg ggagacgcag 240
tcgttcgcaa acttccagca actcataaga gaacacggcg atggcaaact cgtcatgagg 300
cttccggcga ggagatacgc cgagaacgaa aaagccctcc tggggcattg gtacaaatca 360
gtcgtgccta gatactcgac cttgccctcg tccgaggtcc ccaacaacgg cgtcggcgtc 420
gaattcgaga ccatctcggt taacgcgccg ctctactgcc aatggctcga ggctcaactc 480
ttgtctcaca acgccaccat catccgccgc tcgctcaact ccctcgacga ggccttgtcg 540
ctcgcacctt cttgctcggt catcgtcaac gccaccgggc tcggcgccaa atcactcgga 600
ggagtcgagg atcagacggt cacccccatc cgagggcaga ccgtcttgat caagaccgac 660
gtcaagctgt gcactatgga tgcgtcagac cccaccaaac cgtcctatat cattccgagg 720
ccagggggcg aggccgtttg tggtggttgc tacggcctcg gggaatggaa tctctccacc 780
gatacggaac tggccaagct gattctcgaa cgatgcctgg tgctcgaccc ccgcatctca 840
tccaatggtg cgcttgacgg catcgaagtg cttcgacaca atgtcgggct gcggccatca 900
cgaggcacga atgaacccag gctagaggcc gaacgagtcg tccttccttc ctattctttg 960
aaccctcatc gaaggcatgc gctcggtgca gagggcaacg ccgcgacggt cattcacgcc 1020
tacggggtcg ggccggcagg atatcaagtc agctgggggg tcgcgaacga ggtgaaagcg 1080
ctagtcgacg aacacttcgc caagtttgac actcgaacga cccaagacgg cgtccaccgg 1140
gacattaaac tctag 1155
<210> 7
<211> 1197
<212> DNA
<213> Lactobacillus buchneri
<400> 7
atgaccaaag ttctggccgt gctgtatccg gatccggtgg atggttttcc gccgaaatat 60
gttcgtgatg atattccgaa aatcacccat tatccggatg gcagtaccgt tccgaccccg 120
gaaggcattg attttaaacc gggtgaactg ctgggtagcg ttagtggcgg tctgggcctg 180
aaaaaatatc tggaaagtaa aggtgtggaa tttgttgtta ccagtgataa agaaggcccg 240
gatagtgtgt ttgaaaaaga actgccgacc gccgatgtgg ttattagtca gccgttttgg 300
ccggcctatc tgaccgcaga tctgattgat aaagcaaaaa agctgaaact ggcaattacc 360
gccggtattg gcagcgatca tgtggatctg aatgccgcca atgaacataa tattaccgtt 420
gcagaagtga cctatagcaa tagtgttagt gttgcagaag cagaagtgat gcagctgctg 480
gccctggtgc gtaattttat tccggcacat gatattgtga aagccggtgg ctggaatatt 540
gcagatgcag ttagccgtgc ctatgatctg gaaggtatga ccgttggtgt gattggtgca 600
ggccgcattg gtcgtgccgt tctggaacgt ctgaaaccgt ttggcgttaa actggtgtat 660
aatcagcgcc atcagctgcc ggatgaagtt gaaaatgaac tgggcctgac ctattttccg 720
gatgttcatg aaatggtgaa agttgtggat gccgttgttc tggcagcacc gctgcatgca 780
cagacctatc atctgtttaa tgatgaagtt ctggccacca tgaaacgtgg cgcctatatt 840
gtgaataata gccgcggcga agaagttgat cgcgatgcaa ttgttcgcgc actgaatagc 900
ggtcagattg gcggttatag tggcgatgtt tggtatccgc agccggcacc gaaagatcat 960
ccgtggcgta ccatgccgaa tgaagcaatg accccgcata tgagtggcac caccctgagt 1020
gcccaggcac gctatgccgc aggtgcacgt gaaattctgg aagattttct ggaagataaa 1080
ccgattcgtc cggaatatct gattgcccag ggtggtagtc tggccggtac cggtgccaaa 1140
agttataccg tgaaaaaagg cgaagaaacc ccgggtagcg gcgaagcaga aaaataa 1197
<210> 8
<211> 789
<212> DNA
<213> Exiguobacterium sibiricum
<400> 8
atgggttata attctctgaa aggcaaagtc gcgattgtta ctggtggtag catgggcatt 60
ggcgaagcga tcatccgtcg ctatgcagaa gaaggcatgc gcgttgttat caactatcgt 120
agccatccgg aggaagccaa aaagatcgcc gaagatatta aacaggcagg tggtgaagcc 180
ctgaccgtcc agggtgacgt ttctaaagag gaagacatga tcaacctggt gaaacagact 240
gttgatcact tcggtcagct ggacgtcttt gtgaacaacg ctggcgttga gatgccttct 300
ccgtcccacg aaatgtccct ggaagactgg cagaaagtga tcgatgttaa tctgacgggt 360
gcgttcctgg gcgctcgtga agctctgaaa tacttcgttg aacataacgt gaaaggcaac 420
attatcaata tgtctagcgt ccacgaaatc atcccgtggc ctactttcgt acattacgct 480
gcttctaagg gtggcgttaa actgatgacc cagactctgg ctatggaata tgcaccgaaa 540
ggtatccgca ttaacgctat cggtccaggc gcgatcaaca ctccaattaa tgcagaaaaa 600
ttcgaggatc cgaaacagcg tgcagacgtg gaaagcatga tcccgatggg caacatcggc 660
aagccagagg agatttccgc tgtcgcggca tggctggctt ctgacgaagc gtcttacgtt 720
accggcatca ccctgttcgc agatggtggc atgaccctgt acccgagctt tcaggctggc 780
cgtggttga 789
<210> 9
<211> 759
<212> DNA
<213> Lactobacillus brevis
<400> 9
atgagcaacc gtctggacgg caaggtggcg atcattaccg gtggcaccct gggtattggt 60
ctggcgattg cgaccaagtt cgtggaggaa ggtgcgaaag ttatgatcac cggccgtcac 120
agcgacgtgg gcgagaaggc ggcgaaaagc gttggcaccc cggaccagat tcaattcttt 180
cagcacgata gcagcgacga ggatggttgg accaagctgt tcgatgcgac cgaaaaagcg 240
tttggcccgg ttagcaccct ggttaacaac gcgggtattg cggtgaacaa gagcgttgag 300
gaaaccacca ccgcggagtg gcgtaaactg ctggcggtga acctggatgg tgttttcttt 360
ggcacccgtc tgggtatcca acgtatgaag aacaaaggtc tgggcgcgag catcattaac 420
atgagcagca ttgaaggttt cgttggtgac ccgagcctgg gtgcgtacaa cgcgagcaag 480
ggtgcggttc gtatcatgag caaaagcgcg gcgctggatt gcgcgctgaa ggactacgat 540
gtgcgtgtta acaccgtgca cccgggctat attaaaaccc cgctggttga cgatctgccg 600
ggtgcggagg aagcgatgag ccagcgtacc aagaccccga tgggtcacat cggcgaaccg 660
aacgacatcg cgtacatttg cgtttatctg gcgagcaacg agagcaaatt cgcgaccggt 720
agcgaatttg tggttgatgg tggctatacc gcgcaataa 759
<210> 10
<211> 1305
<212> DNA
<213> Delftia acidovorans
<400> 10
atgcagcaac ccgcttcggc cggcgttacc aaccacgcca tcccttccta cctgcaggcc 60
gatcacctcg gcccctgggg caactacctg cagcaggtcg atcgcgtcac gccctacctg 120
ggccatctcg cccgctgggt cgaaaccctc aagcgcccca agcgcatcct gatcgtcgat 180
gtgccgatcg agctggacaa cggcaccatc gcccactacg aaggctaccg cgtgcagcac 240
aacctgagcc gcggtcccgg caagggcggc gtgcgtttcc accaggacgt gaccctgtcc 300
gaagtcatgg ccctgtcggc ctggatgtcg gtcaagaacg cggccgtcaa cgtgccctat 360
ggtggcgcca agggcggcat ccgtgtcgat cccaagacgc tgtcgcgcgg tgagctggag 420
cgcctgacgc gccgctacac cagcgagatc ggcctgctga tcggcccctc caaggacatc 480
cccgcgcctg acgtcaacac caatggccag atcatggcct ggatgatgga cacgtactcc 540
atgaacaccg gcgccaccgc caccggcgtg gtcacgggca agcccgtgga cctgggcggc 600
tcgctgggcc gcgtcgaggc caccggccgc ggcgtgttca ccgtgggcgt ggaagcggcc 660
aagctgaccg gcctgtcggt ccagggcgcg cgcatcgccg tgcagggctt cggcaacgtg 720
ggcggcacgg cgggcaagct gttcgccgac gtgggcgcca aggtcgtggc cgtgcaggac 780
cacaccggca ccatccacaa cgccaatggc ctggacgtgc cggccctgct ggcccacgtg 840
gctgccaagg gcggcgtggg cggctttgac ggcgccgagg ccatggacgc tgccgacttc 900
tggagcgtgg actgcgacat cctgatcccc gccgcactgg aaggccagat caccaaggaa 960
aacgccggca agatcaaggc caagatggtg atcgagggcg ccaacggccc caccaccacc 1020
gaggccgacg acatcctgac cgaaaagggc gtgctggtgc tgcccgatgt gctggccaat 1080
gccggcggcg tgacggtgag ctacttcgaa tgggtgcagg acttctccag cttcttctgg 1140
agcgaggacg agatcaacgc ccgcctggtg cgcatcatgc aggacgcctt cgcggccatc 1200
tggcaggtcg cccagcagca cggcgtgacg ctgcgcaccg ccaccttcat cgtggcctgc 1260
cagcgcatcc tgcatgcgcg cgagatgcgg ggactgtatc cctga 1305

Claims (20)

1. A Glu/Leu/Phe/Val dehydrogenase mutant, wherein the amino acid sequence of the Glu/Leu/Phe/Val dehydrogenase mutant comprises a substitution of an amino acid residue corresponding to position 91 and/or 168 when aligned with the amino acid sequence of a Glu/Leu/Phe/Val dehydrogenase comprising the sequence shown in SEQ ID No.5, said positions 91 and 168 being defined with reference to SEQ ID No.5, and the amino acid sequence of the Glu/Leu/Phe/Val dehydrogenase mutant has at least 90% identity with the sequence shown in SEQ ID No. 5.
2. The Glu/Leu/Phe/Val dehydrogenase mutant according to claim 1, wherein the substitution of the amino acid residue at position 91 is V91I and the substitution of the amino acid residue at position 168 is N168G.
3. Glu/Leu/Phe/Val dehydrogenase mutant according to claim 1 or 2, which is derived from Delftia acidiovarans.
4. The Glu/Leu/Phe/Val dehydrogenase mutant according to any one of claims 1 to 3, which has an amino acid sequence which is at least 99% identical to the sequence shown in SEQ ID No. 5.
5. A nucleic acid comprising a sequence encoding a Glu/Leu/Phe/Val dehydrogenase mutant of any one of claims 1 to 4.
6. An expression vector comprising the nucleic acid of claim 5.
7. A recombinant host cell comprising the nucleic acid of claim 5 or the expression vector of claim 6.
8. The recombinant host cell of claim 7, wherein the host cell belongs to one of Saccharomyces cerevisiae (Saccharomyces cerevisiae), Yarrowia lipolytica (Yarrowia lipolytica), Candida krusei (Candida krusei), Issatchenkia orientalis (Issatchenkia orientalis), Actinomycetes (Actinomycetes), Streptomyces (Streptomyces), Bacillus subtilis (Bacillus subtilis), or Escherichia coli (Escherichia coli).
9. Use of the Glu/Leu/Phe/Val dehydrogenase mutant of any one of claims 1 to 4, the nucleic acid of claim 5, the expression vector of claim 6, or the recombinant host cell of any one of claims 7-8 for the production of L-glufosinate.
10. A method for the preparation of L-glufosinate, comprising converting 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid to L-glufosinate in the presence of an enzymatic catalytic system comprising the Glu/Leu/Phe/Val dehydrogenase mutant of any one of claims 1 to 4 for converting 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid to L-glufosinate.
11. The method of claim 10, wherein the enzymatic catalytic system further comprises a D-amino acid oxidase that converts D-glufosinate to 2-carbonyl-4- [ hydroxy (methyl) phosphono ] butanoic acid.
12. The method of claim 10 or 11, wherein the enzyme catalytic system further comprises a catalase.
13. The method of any one of claims 10 to 12, wherein the enzyme catalysis system further comprises a coenzyme circulation system selected from at least one of:
(1) formate dehydrogenase coenzyme circulation system: including formate dehydrogenase, formate and coenzymes;
(2) glucose dehydrogenase coenzyme circulation system: including glucose dehydrogenase, glucose and coenzymes;
(3) alcohol dehydrogenase coenzyme cycling system: including alcohol dehydrogenases, isopropanol and coenzymes.
14. The method of any one of claims 10 to 13, wherein the form of each enzyme in the enzymatic catalysis system is each independently selected from the group consisting of: free enzymes and recombinant host cells expressing enzymes.
15. The method of claim 14, wherein the recombinant host cells expressing enzymes are each independently selected from the group consisting of: saccharomyces cerevisiae (Saccharomyces cerevisiae), Yarrowia lipolytica (Yarrowia lipolytica), Candida drusei (Candida krusei), Issatchenkia orientalis, Actinomycetes (Actinomycetes), Streptomyces (Streptomyces), Bacillus subtilis (Bacillus subtilis), or Escherichia coli (Escherichia coli).
16. The method according to claim 14 or 15, wherein the total amount of the recombinant host cells added is 1 to 200g/L of the reaction solution, based on the wet cell weight.
17. The process according to any one of claims 10 to 16, wherein the conversion reaction is carried out in a reaction solution having a pH of 7-10, preferably the reaction solution is a reaction solution having a pH of 8-9.
18. The method according to any one of claims 10 to 17, wherein in the reductive amination reaction catalysed by the Glu/Leu/Phe/Val dehydrogenase mutant, the molar ratio of inorganic ammonium donor to substrate at the start of the reaction is from 1:1 to 10: 1.
19. The method according to any one of claims 10 to 18, wherein the Glu/Leu/Phe/Val dehydrogenase mutant catalyzes the oxidation reaction at a temperature of 25-45 ℃ for a period of 6-24 h.
20. The method according to any one of claims 10 to 19, wherein the reductive amination reaction catalysed by the Glu/Leu/Phe/Val dehydrogenase mutant is carried out in the presence of the coenzyme NADH, preferably at a molar ratio of NADH to substrate of 1:10 to 1: 5000.
CN202110475238.XA 2021-04-29 2021-04-29 Glu/Leu/Phe/Val dehydrogenase mutant and application thereof in preparation of L-glufosinate-ammonium Pending CN113969268A (en)

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WO2022228506A1 (en) * 2021-04-29 2022-11-03 永农生物科学有限公司 Glu/leu/phe/val dehydrogenase mutant and application thereof in preparation of l-phosphinothricin
WO2022228505A1 (en) * 2021-04-29 2022-11-03 永农生物科学有限公司 D-amino acid oxidase mutant and application thereof in preparing l-glufosinate

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WO2006061137A1 (en) * 2004-12-09 2006-06-15 Wacker Chemie Ag Gdh mutant having improved chemical stability
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WO2022228506A1 (en) * 2021-04-29 2022-11-03 永农生物科学有限公司 Glu/leu/phe/val dehydrogenase mutant and application thereof in preparation of l-phosphinothricin
WO2022228505A1 (en) * 2021-04-29 2022-11-03 永农生物科学有限公司 D-amino acid oxidase mutant and application thereof in preparing l-glufosinate

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