Detailed Description
The experimental procedures in the following examples are conventional unless otherwise specified. The test materials used in the following examples were all commercially available unless otherwise specified.
Experimental Material
1. Viral strains
A/swan/Shanxi/4-1/2020(H5N8) (SW/SX/4-1/20 for short) is separated from Shanxi dead swan in China in 2020, and is separated, identified and stored by the avian influenza reference laboratory in Harbin veterinary institute of Chinese academy of agricultural sciences, wherein the strain is recorded in the literature: "the immunity efficacy research of the prior recombinant trivalent inactivated vaccine against the H5 and H7 virus antigen variants" of the recombinant avian influenza virus (H5+ H7) "Liuyanjing et al, the Chinese veterinary medicine bulletin, 9 months of Jiejiejing in 2021, was published on line. The applicant has guaranteed that the biomaterial is openly available within twenty years from the filing date.
SPF chick embryos and cells
SPF-chicken embryos and SPF-chickens, purchased from Harbin veterinary institute of Chinese academy of agricultural sciences/national avian laboratory resources Bank, 293T cells (human embryonic kidney cells, SCSP-502) were purchased from the cell Bank of the culture Collection of representatives of Chinese academy of sciences.
3. Plasmid vector
pBD vectors (Zejun Li, Hualan Chen, Pearong Jiao, Guohua Deng, Guobin Tian, Yanbin Li, Erich Hoffmann, Robert G.Webster, Yuniko Matsuoka, and Kangzhen Yu.molecular Basis of Replication of Duck H5N1 Influenza Viruses in a Mammalian Mouse model.J.Virol.2005, 79:12058-12064) were constructed by aged blue researchers, and XbaI cleavage fragments containing the polymerase I promoter-Sapi cloning site-murine ribozyme sequence were included in the vector for unidirectional transcription plasmid, XbaI cleavage fragments were inserted in the pCI (Promega) plasmid in reverse direction to form the RNA polymerase II promoter (CMV) transcription termination signal sequence Rib → RNA genome → mRNA (SV 5 → 3) for bidirectional transcription of the RNA polymerase (mRNA) and mRNA (mRNA) for bidirectional transcription of the vector for RNA polymerase RNA termination → RNA transcription could be constructed. pBD-PB2, pBD-PB1, pBD-PA, pBD-NP, pBD-M, and pBD-NS vectors inserted into 6 internal genes such as A/PR/8/34(H1N1) strains PB2, PB1, PA, NP, M, and NS were identified and stored by avian influenza reference laboratory in Harbin veterinary institute of Chinese academy of agricultural sciences (Guobin Tian, Suhua Zhuang, Yanbig Li, Zhigao Bu, Peahong Liu, Jiyong Zhou, Chengjun Li, Jianzhong Shi, Kangzhen Yu, Hugan Chen.
4. Primary reagent
The virus RNA extraction kit is purchased from Beijing Tiangen Biochemical technology Co., Ltd; a reverse transcription Kit (ReverTra Ace RT Kit) was purchased from Toyobo, Japan; ex-taq enzyme was purchased from Takara; PCR product purification KIT (CYCLE-PURE-KIT) was purchased from Omega; gel recovery kit (Wizard SV Gel and PCR Clean-Up System) was purchased from Promega; sequencing kit (ABI BigDye Terminator v3.1) was purchased from Thermo Fisher, USA; plasmid extraction Kit (QIAGEN Plasmid Midi Kit) was purchased from QIAGEN.
5. Primer and method for producing the same
Analysis and comparison, specific primers of synthetic H5N8 influenza isolate SW/SX/4-1/20(H5N8) HA1, HA2 and NA gene were designed, and the sequences of the synthetic primers are shown in Table 1.
TABLE 1 HA and NA Gene specific primer sequences for H5N8 avian influenza Virus SW/SX/4-1/20(H5N8)
Analysis and comparison, designing specific primers of PB2, PB1, PA, NP, M and NS genes for synthesizing A/PR/8/34(H1N1), and synthesizing primer sequences shown in Table 2.
TABLE 2 primer sequences specific for 6 internal gene segments of influenza A/PR/8/34(H1N1)
Example 1: preparation and identification of recombinant H5N8 influenza virus H5-Re14
1. Construction and identification of 2 surface genes (HA and NA) of recombinant viruses:
extracting RNA of an H5N8 subtype highly pathogenic avian influenza isolate SW/SX/4-1/20(H5N8), and reverse-transcribing the cDNA into cDNA, using HA1 fragment-specific primers (HA 1-U: atg gag aac ata gta ctt ctt ctt g; HA 1-L-: gcc ccg aac agg cct cta gtt tct ctt aga gga cta ttt ctg agc, wherein HA1-L is a primer of which the mutant HA cleavage site is the molecular characteristic of low pathogenic virus) and HA2 fragment-specific primers (HA 2-U: act aga ggc ctg ttc ggg gcg ata gca ggg t; HA 2-L: tta aat gca aat tct gca ctg taa c) of the HA gene, respectively amplifying HA1 and HA2 fragments of the HA gene (A in figure 1) by using an RT-PCR method, carrying out weakening mutation modification on an HA cleavage site while amplifying an HA1 gene segment; then, HA1 and HA2 are used as templates, HA1-U/HA2-L is used as a primer, phusion high fidelity polymerase is used for carrying out overlap extension reaction (SOE-PCR), and HA segments with cleavage sites showing the characteristics (-RETR-) of typical low pathogenicity avian influenza virus molecules are amplified (A in figure 1). And cloning the plasmid into pBD vector to constitute pBD-HA recombinant plasmid.
The mutant primer (HA1-L) of the HA gene cracking site is designed according to the specific sequence of a plurality of continuous basic amino acid sites of the HA gene, and the amplified HA gene cracking site is mutated from-REKRRKR-to-RETR-, so that the HA gene cracking site is mutated from the molecular characteristic of the highly pathogenic avian influenza virus to the molecular characteristic of the typical low pathogenic avian influenza virus (figure 2).
Then, the full length of the NA gene (A in figure 1) of the highly pathogenic H5N8 strain is amplified by an RT-PCR method and inserted into a pBD vector according to the method to construct a pBD-NA recombinant plasmid.
2. Rescue of recombinant virus:
the above-mentioned 2 recombinant plasmids for HA and NA genes and 6 recombinant plasmids for pBD-PB2, pBD-PB1, pBD-PA, pBD-NP and pBD-M, pBD-NS containing internal genes of A/PR/8/34(H1N1) virus were simultaneously introduced into 293T cells in a monolayer by lipofection, and after 48 hours, the cells and supernatant were harvested, and allantoic fluid was harvested after 48 hours and assayed for Hemagglutination (HA) activity by inoculating chick embryo allantoic cavities of 9 to 11 days old. The HA positive sample is the rescued H5N8 subtype low-pathogenicity recombinant virus, the obtained recombinant virus is named as A/Harbin/H5-Re14/2021(H5N8), the strain number is H5-Re14, the recombinant virus is preserved in the China center for type culture Collection of Wuhan university located in Wuhan, China, and the preservation number is CCTCC NO: v202160.
3. Sequence identification of recombinant viruses
Extracting RNA of the recombinant virus H5-Re14, respectively amplifying 8 segments of the recombinant virus H5-Re14 whole genome by using an RT-PCR method, carrying out nucleic acid gel electrophoresis (B in figure 1) on PCR products, and determining a specific sequence of each segment after gel recovery.
The HA gene sequence of the H5-Re14 strain is shown as SEQ ID No.1, the NA gene sequence of the H5-Re14 strain is shown as SEQ ID No.2, the PB2 gene sequence of the H5-Re14 strain is shown as SEQ ID No.3, the PB1 gene sequence of the H5-Re14 strain is shown as SEQ ID No.4, the PA gene sequence of the H5-Re14 strain is shown as SEQ ID No.5, the NP gene sequence of the H5-Re14 strain is shown as SEQ ID No.6, the M gene sequence of the H5-Re14 strain is shown as SEQ ID No.7, and the NS gene sequence of the H5-Re14 strain is shown as SEQ ID No. 8.
Comparing the sequence with the sequences of a wild strain H5N8 influenza virus domestic isolate SW/SX/4-1/20(H5N8) and influenza virus A/PR/8/34(H1N1) by using DNASAR software (DNASAR Lasergene V7.1), and finding that HA and NA of the recombinant viruses H5-Re14 come from the highly pathogenic H5N8 influenza virus domestic isolate SW/SX/4-1/20(H5N8), but the HA cleavage site HAs the molecular characteristics (-RETR-); the 6 internal genes PB2, PB1, PA, NP, M and NS are derived from the highly adapted influenza virus A/PR/8/34(H1N1) in chicken embryos.
4. Determination of growth curve of recombinant virus H5-Re14
Avian influenza vaccines are commonly produced from chicken embryos and require that the vaccine strain has good growth characteristics in the inoculated chicken embryos. The study was conducted to study the growth characteristics of the H5-Re14 strain virus in chicken embryos. Parent virus H5N8 influenza virus epidemic strain SW/SX/4-1/20(H5N8) and recombinant virus H5-Re14 are inoculated with 20 SPF chicken embryos of 2 groups respectively, the two groups of SPF chicken embryos are cultured for 24, 48, 72 and 96 hours respectively at the optimum 36 ℃, 5 chicken embryos cultured for different times are respectively taken for hemagglutination measurement, and the growth curves of the parent virus strain SW/SX/4-1/20(H5N8) and the recombinant virus H5-Re14 are detected.
As can be seen from the test results, the growth titer (average HA titer is 8.6log2 at most, namely 1:388) of the recombinant virus is obviously improved compared with that of the domestic isolate SW/SX/4-1/20(H5N8) (average HA titer is 5.4log2 at most, namely 1:42.2) of the parent H5N8 influenza virus under the culture condition of 36 ℃, and the hemagglutination titer is 9.19 times higher (figure 3). This shows that the recombinant virus with high growth titer prepared by the invention will bring great economic benefit for the subsequent vaccine batch production.
5. Antigenic analysis of recombinant virus H5-Re14
Antigenicity is a key index of whether viruses can be used as vaccine strains. In the research, a parent H5N8 influenza virus domestic isolate SW/SX/4-1/20(H5N8) and an artificially recombined H5N8 influenza virus are inactivated to prepare an oil emulsion inactivated vaccine, immune SPF chickens are prepared into antiserum, and an HI test is used for antigenicity analysis, wherein the HI test method refers to national standard (GB) of highly pathogenic avian influenza diagnosis technology (GB/T118936-2020)). The HI test result shows that the cross HI titer of the domestic isolate SW/SX/4-1/20(H5N8) of the parent H5N8 influenza virus and the artificially recombined H5N8 influenza virus and the corresponding serum is not different, which indicates that the virus still maintains the antigenicity of the parent strain after the H5N8 virus is recombined into the chick embryo adaptive H5-Re14 strain (see Table 3).
Table 3: antigenic analysis of parental strain SW/SX/4-1/20(H5N8) and recombinant virus H5-Re14 strain
6. Pathogenicity test of recombinant virus H5-Re14 strain on chick embryo and chick
The low pathogenicity of vaccine strains is a prerequisite for biosafety. SPF chick embryos of 9-11 days old and SFP chickens of 4-8 weeks old are often used as avian influenza virus pathogenicity evaluation models.
To understand the pathogenicity of recombinant strains, the invention first uses SPF chick embryos for assessment of viral pathogenicity. 20 SPF (specific pathogen free) chick embryos (purchased from Harbin veterinary institute of Chinese academy of agricultural sciences/national bird laboratory animal resource base) of 9 days old were randomly divided into 2 groups of 10, the first group was inoculated with 10 via allantoic cavity-4The second group was inoculated 10 via allantoic cavity with double-diluted recombinant H5-Re14 strain virus fluid-4Double dilution of the virus fluid of the parent strain SW/SX/4-1/20(H5N 8). Chick embryo death was observed and recorded within 72 hours after inoculation.
The invention simultaneously uses SPF chickens to evaluate the pathogenicity and the infection capacity of the virus. 20 SPF chickens of 6 weeks old are randomly divided into 2 groups, each group comprises 10 SPF chickens, the recombinant strain H5-Re14 and the parent strain SW/SX/4-1/20(H5N8) allantoic fluid are respectively diluted by 10 times, then the SPF chickens of 6 weeks old are inoculated by a vein way, the death condition of the SPF chickens is observed every day after inoculation, the disease index (IVPI) of the SPF chickens inoculated in the vein is calculated after 10 days of continuous observation. If the IVPI is more than 1.2, the strain is a highly pathogenic strain; if the IVPI is less than 1.2, the HA cleavage site is the molecular characteristic of the highly pathogenic avian influenza virus, and is a highly pathogenic avian influenza strain; if IVPI is less than 1.2, HA cleavage site is the molecular characteristic of low pathogenic influenza virus, then it is low pathogenic avian influenza virus strain.
20 SPF chickens of 6 weeks old are randomly divided into 2 groups of 10, the recombinant strain H5-Re14 and the parent strain SW/SX/4-1/20(H5N8) allantoic fluid are respectively diluted to 106EID50After each ml, 10 SPF-chickens 6 weeks old, 0.1 ml/chicken, were inoculated by the nasal route. And (3) observing the morbidity and mortality every day after inoculation, continuously observing for 14 days, simultaneously collecting laryngeal and cloaca swabs for virus titration, and evaluating the infection capacity of the virus to the chickens.
All test chickens were housed in negative pressure isolators with independent ventilation systems, and all tests involving the highly pathogenic H5N8 virus were conducted in a biosafety third-level laboratory.
The pathogenic test result of the SPF chick embryo shows that the chick embryo inoculated with the virus liquid of the parent strain SW/SX/4-1/20(H5N8) is completely killed within 26-30 hours after inoculation, and all the chick embryos inoculated with the virus liquid of the recombinant strain H5-Re14 are completely survived within 72 hours after inoculation, which shows that the recombinant virus of the H5-Re14 strain is not pathogenic to the chick embryo.
Test results of intravenous inoculation pathogenicity index (IVPI) determination of SPF chickens show that chickens inoculated with virus liquid of a parent strain SW/SX/4-1/20(H5N8) are all killed within 1 day after inoculation, and the IVPI of the chickens is 3.0; no adverse reaction occurs in all chickens inoculated with the recombinant strain H5-Re14 virus liquid within 10 days, and the constructed H5-Re14 recombinant virus IVPI is 0 (see Table 4). The H5-Re14 strain recombinant virus is shown to be a low-pathogenicity strain and has no pathogenicity to chickens.
The nasal infection test result of SPF chicken shows that all chicken inoculated with the virus liquid of the parent strain SW/SX/4-1/20(H5N8) through the nasal cavity die after being inoculated within 2-3 days; all chickens inoculated with the recombinant strain H5-Re14 virus solution through the nasal cavity have no adverse reaction within an observation period of 14 days; all chicken infected with SW/SX/4-1/20(H5N8) virus and dead chicken have positive larynx and cloaca swab virus detection, while chicken infected with H5-Re14 strain recombinant virus have negative virus detection in swab samples at 3 days and 5 days, which indicates that the H5-Re14 strain recombinant virus has no infection and pathogenicity to chicken (see Table 4).
The results show that the H5-Re14 strain recombinant virus has no pathogenicity to chicken embryos and chickens, and has high biological safety.
TABLE 4 pathogenicity and infectivity assay of recombinant viruses of strain H5-Re14
All the chickens in the group died after attacking the toxin within 2-3 days, and all the dead chickens detoxify and count the result of detoxifying 3 days after attacking the toxin; the group of chickens did not survive 5 days after challenge.
7. Immunogenicity assessment of recombinant Virus H5-Re14 Strain
A recombinant virus H5-Re14 strain with HA number of 8log2 is inactivated by 0.2% formaldehyde, and then an oil emulsion inactivated vaccine is prepared by taking American sornneborn brand-40 (Lytol) white oil as an adjuvant, 10 SPF (specific pathogen free) chickens with the age of 3 weeks are taken as model animals, 0.3 ml/muscle is injected for immunization, and 10 non-immune control chickens are arranged at the same time. HI antibody titers in all chicken sera were measured 21 days after immunization, simultaneously with 100CLD50(CLD50 is half of death causing amount of chicken) attacks SW/SX/4-1/20(H5N8) for strong toxicity, observing 14 days after the toxicity is attacked, observing survival conditions, collecting swabs of larynx and cloaca at 3 days and 5 days after the toxicity is attacked, and inoculating chick embryos to detect toxicity expelling conditions. Dead chicken swab samples were collected at any time.
The results show that the HI antibody titer of the immune chicken serum against the H5N8 virus is between 7.0log2 and 9.0log2 at 21 days of immunization, the average titer is 8.0log2, and the control chicken serum is against the H5N8 diseaseThe antibody titers of the toxic HI are all less than 2.0log2 (HI is judged to be HI antibody negative by < 2log 2); nasal infection route 100LD 21 days after immunization50After the dosage of the composition attacks the H5N8 subtype avian influenza virulent virus, all immunized chickens are healthy and alive, and virus detection of swab samples 3 days and 5 days after the attack is negative; the control chickens all died within 5 days after challenge, and virus isolation results of swabs of throat and cloaca of dead chickens are positive (see table 5).
TABLE 5 HI antibody after vaccine immunization of chicken prepared from recombinant virus strain H5-Re14 and survival and toxin expelling conditions after challenge
All the chickens in the group died after attacking the toxin within 2-4 days, all the dead chickens were detected to expel toxin, and the result of expelling the toxin was counted as the result of expelling the toxin 3 days after attacking the toxin; the group of chickens did not survive 5 days after challenge.
The results show that the artificial recombinant H5N8 influenza virus H5-Re14 has good immunogenicity and can prevent H5N8 subtype avian influenza.
Sequence listing
<110> Harbin veterinary institute of Chinese academy of agricultural sciences (Harbin center of Chinese center of animal health and epidemiology)
<120> artificially recombined H5N8 influenza virus, preparation method and application thereof
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atggagaaca tagtacttct tcttgcaata gttagccttg ttaaaagtga tcagatttgc 60
attggttacc atgcaaacaa ttcgacagag caagttgaca cgataatgga aaagaacgtc 120
actgttacac atgcccaaga catactggaa aaaacacaca acgggaagct ctgtgatcta 180
aatggggtga agcctctgat tttaaaggat tgtagtgtag ctggatggct cctcggaaac 240
ccaatgtgcg acgaattcat cagagtgccg gaatggtcct acatagtgga gagggctaat 300
ccagctaatg acctctgtta cccagggagc ctcaatgact atgaagaact gaaacacctg 360
ttgagcagaa taaatcattt tgagaagatt ctgatcatcc ccaagagttc atggccaaac 420
catgaaacat cactaggggt gagcgcagct tgtccatacc agggagcgcc ctcctttttc 480
agaaatgtgg tgtggcttat caaaaagaac gatgcatacc caacaataaa gataagctac 540
aataatacca atcgggaaga tctcttgata ctgtggggga ttcatcattc caacaatgca 600
gaagagcaga taaatctcta taaaaaccca accacctaca tttcagttgg aacatcaact 660
ttaaaccaga ggttggtacc aaaaatagct actagatccc aagtaaacgg gcaacgtgga 720
agaatggact tcttctggac aattttaaaa ccggatgatg caatccattt cgagagtaat 780
ggaaatttca ttgctccaga atatgcatac aaaattgtca agaaagggga ctcaacaatt 840
atgaaaagtg gagtggaata tggccactgc aacaccaaat gtcaaacccc agtaggagcg 900
ataaattcta gtatgccctt ccacaacata catcctctca ccattgggga atgccccaaa 960
tacgtgaaat caaacaagtt ggtccttgcg actgggctca gaaatagtcc tctaagagaa 1020
actagaggcc tgttcggggc gatagcaggg tttatagagg gaggatggca gggaatggtt 1080
gatggttggt atgggtacca ccatagcaat gagcagggga gtgggtacgc tgcagacaaa 1140
gaatccaccc aaaaggcaat agatggagtt accaataagg tcaactcaat cattgacaaa 1200
atgaacactc aatttgaggc agttggaagg gagtttaata acttagaaag gaggatagag 1260
aatttgaaca agaaaatgga agacggattc ctagatgtct ggacctataa tgctgaactt 1320
ctagttctca tggaaaacga gaggactcta gatttccatg attcaaatgt caagaacctt 1380
tacgacaaag tcagactaca gcttagggat aatgcaaagg agctgggtaa cggctgtttc 1440
gaattctatc acaaatgcga taatgaatgt atggaaagtg tgagaaatgg gacgtatgac 1500
taccctcagt attcagaaga agcaagatta aaaagagaag aaataagcgg agtgaaatta 1560
gaatcaatag gaacttacca gatactgtca atttattcaa cagcggcgag ttccctagca 1620
ctggcaatca tgatggctgg tctatcttta tggatgtgct ccaatgggtc gttacagtgc 1680
agaatttgca tttaa 1695
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atgaatccaa atcagaaaat agcgaccatt ggctccatct cattgggact agttgtattc 60
aatgttctac tgcatgcctt gagcatcata ttaatggtgt tagccctggg gaaaagtgaa 120
aacaatggaa tctgcaaggg aactatagta agggaatata atgaaacagt taggatagag 180
aaagtgaccc agtggtacaa cactagtgta gtcgaacatg taccgcattg gaacgagggc 240
gcttatataa acaacaccga accaatatgt gatgtcaagg gctttgcacc tttttccaag 300
gacaacggaa taagaattgg ctccagagga catatttttg tcataaggga gcctttcgtc 360
tcttgttcac ctgtagagtg cagaactttc ttcctcactc agggagctct actcaatgac 420
aaacactcaa atggaacagt gaaggatagg agcccattca gaactctcat gagtgtcgaa 480
gtgggtcaat cacccaatgt gtatcaagca aggtttgaag ctgtagcatg gtcagcaaca 540
gcctgtcatg atggtaagaa atggatgacg attggtgtga cagggccaga ttcgaaagca 600
atagcagtag tccattacgg aggagtgccc actgatattg ttaactcctg ggcaggagac 660
atattacgga ctcaggagtc atcttgtact tgcattcaag gtaattgtta ttgggtaatg 720
actgacggtc catccaatag acaggcgcag tatagaatat acaaagcaaa tcaaggcaaa 780
ataattgacc aagcagatgt cagctttagt ggagggcata ttgaggaatg ctcttgttat 840
ccaaatgatg gtaaagtgga atgcgtatgt agagacaact ggatgggaac taacaggcct 900
gtgctagtta tctcgcctga cctctcttac agggttgggt atttatgtgc gggattgccc 960
agtgacactc caagagggga agatgcccaa tttgtcggtt cgtgcactag tcccatggga 1020
aatcaggggt atggcgtaaa aggtttcggg tttcgacagg gaactgatgt gtggatgggg 1080
cggacaatta gtcgaacctc caggtcaggg tttgaaataa taaggataaa gaatggttgg 1140
acgcagacaa gcaaagaaca gattagaagg caggtggttg ttgataattt gaattggtcg 1200
ggatacagtg ggtctttcac tttaccagta gaattgtctg ggagggaatg tttagtcccc 1260
tgtttttggg tcgaaatgat cagaggcagg ccagaagaaa gaacaatctg gacctctagt 1320
agctccattg taatgtgtgg agttgatcat gaaattgccg attggtcatg gcacgatgga 1380
gctattcttc cctttgacat cgatgggatg taa 1413
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atggaaagaa taaaagaact aagaaatcta atgtcgcagt ctcgcacccg cgagatactc 60
acaaaaacca ccgtggacca tatggccata atcaagaagt acacatcagg aagacaggag 120
aagaacccag cacttaggat gaaatggatg atggcaatga aatatccaat tacagcagac 180
aagaggataa cggaaatgat tcctgagaga aatgagcaag gacaaacttt atggagtaaa 240
atgaatgatg ccggatcaga ccgagtgatg gtatcacctc tggctgtgac atggtggaat 300
aggaatggac caatgacaaa tacagttcat tatccaaaaa tctacaaaac ttattttgaa 360
agagtcgaaa ggctaaagca tggaaccttt ggccctgtcc attttagaaa ccaagtcaaa 420
atacgtcgga gagttgacat aaatcctggt catgcagatc tcagtgccaa ggaggcacag 480
gatgtaatca tggaagttgt tttccctaac gaagtgggag ccaggatact aacatcggaa 540
tcgcaactaa cgataaccaa agagaagaaa gaagaactcc aggattgcaa aatttctcct 600
ttgatggttg catacatgtt ggagagagaa ctggtccgca aaacgagatt cctcccagtg 660
gctggtggaa caagcagtgt gtacattgaa gtgttgcatt tgactcaagg aacatgctgg 720
gaacagatgt atactccagg aggggaagtg aagaatgatg atgttgatca aagcttgatt 780
attgctgcta ggaacatagt gagaagagct gcagtatcag cagacccact agcatcttta 840
ttggagatgt gccacagcac acagattggt ggaattagga tggtagacat ccttaagcag 900
aacccaacag aagagcaagc cgtggatata tgcaaggctg caatgggact gagaattagc 960
tcatccttca gttttggtgg attcacattt aagagaacaa gcggatcatc agtcaagaga 1020
gaggaagagg tgcttacggg caatcttcaa acattgaaga taagagtgca tgagggatct 1080
gaagagttca caatggttgg gagaagagca acagccatac tcagaaaagc aaccaggaga 1140
ttgattcagc tgatagtgag tgggagagac gaacagtcga ttgccgaagc aataattgtg 1200
gccatggtat tttcacaaga ggattgtatg ataaaagcag ttagaggtga tctgaatttc 1260
gtcaataggg cgaatcagcg actgaatcct atgcatcaac ttttaagaca ttttcagaag 1320
gatgcgaaag tgctttttca aaattgggga gttgaaccta tcgacaatgt gatgggaatg 1380
attgggatat tgcccgacat gactccaagc atcgagatgt caatgagagg agtgagaatc 1440
agcaaaatgg gtgtagatga gtactccagc acggagaggg tagtggtgag cattgaccgg 1500
ttcttgagag tcagggacca acgaggaaat gtactactgt ctcccgagga ggtcagtgaa 1560
acacagggaa cagagaaact gacaataact tactcatcgt caatgatgtg ggagattaat 1620
ggtcctgaat cagtgttggt caatacctat caatggatca tcagaaactg ggaaactgtt 1680
aaaattcagt ggtcccagaa ccctacaatg ctatacaata aaatggaatt tgaaccattt 1740
cagtctttag tacctaaggc cattagaggc caatacagtg ggtttgtaag aactctgttc 1800
caacaaatga gggatgtgct tgggacattt gataccgcac agataataaa acttcttccc 1860
ttcgcagccg ctccaccaga gcaaagtaga atgcagttct cctcatttac tgtgaatgtg 1920
aggggatcag gaatgagaat acttgtaagg ggcaattctc ctgtattcaa ctacaacaag 1980
gccacgaaga gactcacagt tctcggaaag gatgctggca ctttaaccga agacccagat 2040
gaaggcacag ctggagtgga gtccgctgtt ctgaggggat tcctcattct gggcaaagaa 2100
gacaggagat atgggccagc attaagcatc aatgaactga gcaaccttgc gaaaggagag 2160
aaggctaatg tgctaattgg gcaaggagac gtggtgttgg taatgaaacg aaaacgggac 2220
tctagcatac ttactgacag ccagacagcg accaaaagaa ttcggatggc catcaattag 2280
<210> 4
<211> 2274
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 4
atggatgtca atccgacctt acttttctta aaagtgccag cacaaaatgc tataagcaca 60
actttccctt ataccggaga ccctccttac agccatggga caggaacagg atacaccatg 120
gatactgtca acaggacaca tcagtactca gaaaagggaa gatggacaac aaacaccgaa 180
actggagcac cgcaactcaa cccgattgat gggccactgc cagaagacaa tgaaccaagt 240
ggttatgccc aaacagattg tgtattggaa gcaatggctt tccttgagga atcccatcct 300
ggtatttttg aaaactcgtg tattgaaacg atggaggttg ttcagcaaac acgagtagac 360
aagctgacac aaggccgaca gacctatgac tggactttaa atagaaacca gcctgctgca 420
acagcattgg ccaacacaat agaagtgttc agatcaaatg gcctcacggc caatgagtca 480
ggaaggctca tagacttcct taaggatgta atggagtcaa tgaaaaaaga agaaatgggg 540
atcacaactc attttcagag aaagagacgg gtgagagaca atatgactaa gaaaatgata 600
acacagagaa caataggtaa aaggaaacag agattgaaca aaaggggtta tctaattaga 660
gcattgaccc tgaacacaat gaccaaagat gctgagagag ggaagctaaa acggagagca 720
attgcaaccc cagggatgca aataaggggg tttgtatact ttgttgagac actggcaagg 780
agtatatgtg agaaacttga acaatcaggg ttgccagttg gaggcaatga gaagaaagca 840
aagttggcaa atgttgtaag gaagatgatg accaattctc aggacaccga actttctttc 900
accatcactg gagataacac caaatggaac gaaaatcaga atcctcggat gtttttggcc 960
atgatcacat atatgaccag aaatcagccc gaatggttca gaaatgttct aagtattgct 1020
ccaataatgt tctcaaacaa aatggcgaga ctgggaaaag ggtatatgtt tgagagcaag 1080
agtatgaaac ttagaactca aatacctgca gaaatgctag caagcattga tttgaaatat 1140
ttcaatgatt caacaagaaa gaagattgaa aaaatccgac cgctcttaat agaggggact 1200
gcatcattga gccctggaat gatgatgggc atgttcaata tgttaagcac tgtattaggc 1260
gtctccatcc tgaatcttgg acaaaagaga tacaccaaga ctacttactg gtgggatggt 1320
cttcaatcct ctgacgattt tgctctgatt gtgaatgcac ccaatcatga agggattcaa 1380
gccggagtcg acaggtttta tcgaacctgt aagctacttg gaatcaatat gagcaagaaa 1440
aagtcttaca taaacagaac aggtacattt gaattcacaa gttttttcta tcgttatggg 1500
tttgttgcca atttcagcat ggagcttccc agttttgggg tgtctgggat caacgagtca 1560
gcggacatga gtattggagt tactgtcatc aaaaacaata tgataaacaa tgatcttggt 1620
ccagcaacag ctcaaatggc ccttcagttg ttcatcaaag attacaggta cacgtaccga 1680
tgccatagag gtgacacaca aatacaaacc cgaagatcat ttgaaataaa gaaactgtgg 1740
gagcaaaccc gttccaaagc tggactgctg gtctccgacg gaggcccaaa tttatacaac 1800
attagaaatc tccacattcc tgaagtctgc ctaaaatggg aattgatgga tgaggattac 1860
caggggcgtt tatgcaaccc actgaaccca tttgtcagcc ataaagaaat tgaatcaatg 1920
aacaatgcag tgatgatgcc agcacatggt ccagccaaaa acatggagta tgatgctgtt 1980
gcaacaacac actcctggat ccccaaaaga aatcgatcca tcttgaatac aagtcaaaga 2040
ggagtacttg aagatgaaca aatgtaccaa aggtgctgca atttatttga aaaattcttc 2100
cccagcagtt catacagaag accagtcggg atatccagta tggtggaggc tatggtttcc 2160
agagcccgaa ttgatgcacg gattgatttc gaatctggaa ggataaagaa agaagagttc 2220
actgagatca tgaagatctg ttccaccatt gaagagctca gacggcaaaa atag 2274
<210> 5
<211> 2151
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 5
atggaagatt ttgtgcgaca atgcttcaat ccgatgattg tcgagcttgc ggaaaaaaca 60
atgaaagagt atggggagga cctgaaaatc gaaacaaaca aatttgcagc aatatgcact 120
cacttggaag tatgcttcat gtattcagat ttccacttca tcaatgagca aggcgagtca 180
ataatcgtag aacttggtga tcctaatgca cttttgaagc acagatttga aataatcgag 240
ggaagagatc gcacaatggc ctggacagta gtaaacagta tttgcaacac tacaggggct 300
gagaaaccaa agtttctacc agatttgtat gattacaagg aaaatagatt catcgaaatt 360
ggagtaacaa ggagagaagt tcacatatac tatctggaaa aggccaataa aattaaatct 420
gagaaaacac acatccacat tttctcgttc actggggaag aaatggccac aagggccgac 480
tacactctcg atgaagaaag cagggctagg atcaaaacca ggctattcac cataagacaa 540
gaaatggcca gcagaggcct ctgggattcc tttcgtcagt ccgagagagg agaagagaca 600
attgaagaaa ggtttgaaat cacaggaaca atgcgcaagc ttgccgacca aagtctcccg 660
ccgaacttct ccagccttga aaattttaga gcctatgtgg atggattcga accgaacggc 720
tacattgagg gcaagctgtc tcaaatgtcc aaagaagtaa atgctagaat tgaacctttt 780
ttgaaaacaa caccacgacc acttagactt ccgaatgggc ctccctgttc tcagcggtcc 840
aaattcctgc tgatggatgc cttaaaatta agcattgagg acccaagtca tgaaggagag 900
ggaataccgc tatatgatgc aatcaaatgc atgagaacat tctttggatg gaaggaaccc 960
aatgttgtta aaccacacga aaagggaata aatccaaatt atcttctgtc atggaagcaa 1020
gtactggcag aactgcagga cattgagaat gaggagaaaa ttccaaagac taaaaatatg 1080
aaaaaaacaa gtcagctaaa gtgggcactt ggtgagaaca tggcaccaga aaaggtagac 1140
tttgacgact gtaaagatgt aggtgatttg aagcaatatg atagtgatga accagaattg 1200
aggtcgcttg caagttggat tcagaatgag ttcaacaagg catgcgaact gacagattca 1260
agctggatag agcttgatga gattggagaa gatgtggctc caattgaaca cattgcaagc 1320
atgagaagga attatttcac atcagaggtg tctcactgca gagccacaga atacataatg 1380
aagggggtgt acatcaatac tgccttactt aatgcatctt gtgcagcaat ggatgatttc 1440
caattaattc caatgataag caagtgtaga actaaggagg gaaggcgaaa gaccaacttg 1500
tatggtttca tcataaaagg aagatcccac ttaaggaatg acaccgacgt ggtaaacttt 1560
gtgagcatgg agttttctct cactgaccca agacttgaac cacacaaatg ggagaagtac 1620
tgtgttcttg agataggaga tatgcttcta agaagtgcca taggccaggt ttcaaggccc 1680
atgttcttgt atgtgaggac aaatggaacc tcaaaaatta aaatgaaatg gggaatggag 1740
atgaggcgtt gtctcctcca gtcacttcaa caaattgaga gtatgattga agctgagtcc 1800
tctgtcaaag agaaagacat gaccaaagag ttctttgaga acaaatcaga aacatggccc 1860
attggagagt ctcccaaagg agtggaggaa agttccattg ggaaggtctg caggacttta 1920
ttagcaaagt cggtatttaa cagcttgtat gcatctccac aactagaagg attttcagct 1980
gaatcaagaa aactgcttct tatcgttcag gctcttaggg acaatctgga acctgggacc 2040
tttgatcttg gggggctata tgaagcaatt gaggagtgcc taattaatga tccctgggtt 2100
ttgcttaatg cttcttggtt caactccttc cttacacatg cattgagtta g 2151
<210> 6
<211> 1497
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 6
atggcgtccc aaggcaccaa acggtcttac gaacagatgg agactgatgg agaacgccag 60
aatgccactg aaatcagagc atccgtcgga aaaatgattg gtggaattgg acgattctac 120
atccaaatgt gcacagaact taaactcagt gattatgagg gacggttgat ccaaaacagc 180
ttaacaatag agagaatggt gctctctgct tttgacgaaa ggagaaataa atacctggaa 240
gaacatccca gtgcggggaa agatcctaag aaaactggag gacctatata cagaagagta 300
aacggaaagt ggatgagaga actcatcctt tatgacaaag aagaaataag gcgaatctgg 360
cgccaagcta ataatggtga cgatgcaacg gctggtctga ctcacatgat gatctggcat 420
tccaatttga atgatgcaac ttatcagagg acaagggctc ttgttcgcac cggaatggat 480
cccaggatgt gctctctgat gcaaggttca actctcccta ggaggtctgg agccgcaggt 540
gctgcagtca aaggagttgg aacaatggtg atggaattgg tcaggatgat caaacgtggg 600
atcaatgatc ggaacttctg gaggggtgag aatggacgaa aaacaagaat tgcttatgaa 660
agaatgtgca acattctcaa agggaaattt caaactgctg cacaaaaagc aatgatggat 720
caagtgagag agagccggaa cccagggaat gctgagttcg aagatctcac ttttctagca 780
cggtctgcac tcatattgag agggtcggtt gctcacaagt cctgcctgcc tgcctgtgtg 840
tatggacctg ccgtagccag tgggtacgac tttgaaagag agggatactc tctagtcgga 900
atagaccctt tcagactgct tcaaaacagc caagtgtaca gcctaatcag accaaatgag 960
aatccagcac acaagagtca actggtgtgg atggcatgcc attctgccgc atttgaagat 1020
ctaagagtat tgagcttcat caaagggacg aaggtggtcc caagagggaa gctttccact 1080
agaggagttc aaattgcttc caatgaaaat atggagacta tggaatcaag tacacttgaa 1140
ctgagaagca ggtactgggc cataaggacc agaagtggag gaaacaccaa tcaacagagg 1200
gcatctgcgg gccaaatcag catacaacct acgttctcag tacagagaaa tctccctttt 1260
gacagaacaa ccgttatggc agcattcact gggaatacag aggggagaac atctgacatg 1320
aggaccgaaa tcataaggat gatggaaagt gcaagaccag aagatgtgtc tttccagggg 1380
cggggagtct tcgagctctc ggacgaaaag gcagcgagcc cgatcgtgcc ttcctttgac 1440
atgagtaatg aaggatctta tttcttcgga gacaatgcag aggagtacga caattaa 1497
<210> 7
<211> 982
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 7
atgagtcttc taaccgaggt cgaaacgtac gttctctcta tcatcccgtc aggccccctc 60
aaagccgaga tcgcacagag acttgaagat gtctttgcag ggaagaacac cgatcttgag 120
gttctcatgg aatggctaaa gacaagacca atcctgtcac ctctgactaa ggggatttta 180
ggatttgtgt tcacgctcac cgtgcccagt gagcgaggac tgcagcgtag acgctttgtc 240
caaaatgccc ttaatgggaa cggggatcca aataacatgg acaaagcagt taaactgtat 300
aggaagctca agagggagat aacattccat ggggccaaag aaatctcact cagttattct 360
gctggtgcac ttgccagttg tatgggcctc atatacaaca ggatgggggc tgtgaccact 420
gaagtggcat ttggcctggt atgtgcaacc tgtgaacaga ttgctgactc ccagcatcgg 480
tctcataggc aaatggtgac aacaaccaac ccactaatca gacatgagaa cagaatggtt 540
ttagccagca ctacagctaa ggctatggag caaatggctg gatcgagtga gcaagcagca 600
gaggccatgg aggttgctag tcaggctagg caaatggtgc aagcgatgag aaccattggg 660
actcatccta gctccagtgc tggtctgaaa aatgatcttc ttgaaaattt gcaggcctat 720
cagaaacgaa tgggggtgca gatgcaacgg ttcaagtgat cctctcgcta ttgccgcaaa 780
tatcattggg atcttgcact tgatattgtg gattcttgat cgtctttttt tcaaatgcat 840
ttaccgtcgc tttaaatacg gactgaaagg agggccttct acggaaggag tgccaaagtc 900
tatgagggaa gaatatcgaa aggaacagca gagtgctgtg gatgctgacg atggtcattt 960
tgtcagcata gagctggagt aa 982
<210> 8
<211> 838
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 8
atggatccaa acactgtgtc aagctttcag gtagattgct ttctttggca tgtccgcaaa 60
cgagttgtag accaagaact aggtgatgcc ccattccttg atcggcttcg ccgagatcag 120
aaatccctaa gaggaagggg cagcactctt ggtctggaca tcgagacagc cacacgtgct 180
ggaaagcaga tagtggagcg gattctgaaa gaagaatccg atgaggcact taaaatgacc 240
atggcctctg tacctgcgtc gcgttaccta accgacatga ctcttgagga aatgtcaagg 300
gaatggtcca tgctcatacc caagcagaaa gtggcaggcc ctctttgtat cagaatggac 360
caggcgatca tggataaaaa catcatactg aaagcgaact tcagtgtgat ttttgaccgg 420
ctggagactc taatattgct aagggctttc accgaagagg gagcaattgt tggcgaaatt 480
tcaccattgc cttctcttcc aggacatact gctgaggatg tcaaaaatgc agttggagtc 540
ctcatcggag gacttgaatg gaatgataac acagttcgag tctctgaaac tctacagaga 600
ttcgcttgga gaagcagtaa tgagaatggg agacctccac tcactccaaa acagaaacga 660
gaaatggcgg gaacaattag gtcagaagtt tgaagaaata agatggttga ttgaagaagt 720
gagacacaaa ctgaaggtaa cagagaatag ttttgagcaa ataacattta tgcaagcctt 780
acatctattg cttgaagtgg agcaagagat aagaactttc tcatttcagc ttatttaa 838
<210> 9
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 9
atggagaaca tagtacttct tcttg 25
<210> 10
<211> 45
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 10
gccccgaaca ggcctctagt ttctcttaga ggactatttc tgagc 45
<210> 11
<211> 31
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 11
actagaggcc tgttcggggc gatagcaggg t 31
<210> 12
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 12
ttaaatgcaa attctgcact gtaac 25