CN112961233A - Application of deep sea chitin peptide - Google Patents

Application of deep sea chitin peptide Download PDF

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CN112961233A
CN112961233A CN202110226157.6A CN202110226157A CN112961233A CN 112961233 A CN112961233 A CN 112961233A CN 202110226157 A CN202110226157 A CN 202110226157A CN 112961233 A CN112961233 A CN 112961233A
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crustin
deep sea
application
chitin
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CN112961233B (en
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孙黎
王玉建
管晓璐
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Institute of Oceanology of CAS
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    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
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    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
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Abstract

The invention relates to the field of molecular biology, in particular to application of deep sea chitin (crustin). The deep sea crustin is applied to preparing a sterilization preparation. The deep sea crustin is a recombinant protein expressed in escherichia coli. The recombinant crustin is used for sterilization.

Description

Application of deep sea chitin peptide
Technical Field
The invention relates to the field of molecular biology, in particular to application of deep sea chitin (crustin).
Background
Crustin is a class of polypeptides that are predominantly present in crustaceans. Crustin generally has a molecular weight of 7-22kDa, contains a signal peptide at the N-terminal, a Multi-domain region (Multi-domain region) in the middle, and contains a highly conserved orotic acid protein domain (hey acid protein domain) with four disulfide bonds as the core at the C-terminal. Crustin is expressed in blood cells, liver pancreas, gill and intestine and responds immunologically upon bacterial or viral stimulation. Crustisn is capable of binding bacteria and has in vitro antibacterial activity. Furthermore, crustin is able to inhibit protease activity. However, crustin is derived from a plurality of sources, and different environments and species can cause mutual differences, so that the possibility of whether the crustin is related or not is unknown.
Disclosure of Invention
The invention aims to provide application of deep sea chitin (crustin).
In order to achieve the purpose, the invention adopts the technical scheme that:
an application of deep-sea crustin in preparing a bactericidal preparation.
The deep sea crustin is an amino acid sequence shown in SEQ ID No.1.
The deep sea crustin is a recombinant protein expressed in escherichia coli.
The bacteria are Bacillus wiedmannii, Streptococcus iniae or Micrococcus luteus.
The invention has the following advantages:
the crustin is derived from the Alnus japonicus in the deep sea extreme environment (a hot liquid jet in a Magnus basin) below kilometers, and the extreme environment in which the crustin lives has the characteristics of low temperature, high pressure, oligotrophism and the like, so that the Crustin has unique genome characteristics and physiological mechanisms different from terrestrial and shallow sea organisms; the identity with the known shallow sea crustacean crustin is only about 40-50 percent; meanwhile, the deep sea crustin-derived antibacterial agent can specifically kill bacillus cereus, streptococcus iniae or micrococcus luteus.
Drawings
FIG. 1 shows the killing effect of recombinant crustin protein on bacteria.
Detailed Description
The present invention will be further described with reference to the following examples. The examples are intended to illustrate the invention, but not to limit it in any way.
Example 1
Crustin (named Crus1) in the present invention is derived from the transcriptome of hot liquid-jet alvard shrimps in the deep-sea magnus basin, and is described in NCBI database under Genbank accession number: SRR 4342052; then, the sequence was obtained by sequence alignment using Protein BLAST, and the crustin sequence is the amino acid sequence shown in SEQ ID No.1.
SEQ ID No.1 of the sequence table is:
MMLVRVATVLLAVLVATTEASPSTPQDSRSCRYWCRKPDNAVYCCDFGNFPPIPVPVPEHKGVCPEVRPCPGIKFSPQLCPHDGHCKRNEKCCYDSCLEHHACKLASNA
(a) sequence characteristics:
● length: 109, effective length 21-109
● type: amino acid sequence
● chain type: single strand
● topology: linearity
(b) Molecular type: protein
(c) Signal peptide sequence: 1-20 amino acids
(d) Suppose that: whether or not
(e) Antisense: whether or not
(f) The initial sources were: deep sea Alwen shrimp
The molecular weight of the Crus1 is 13.4kDa, the N end contains a signal peptide, the middle part is a multi-domain region, and the C end contains a section of highly conserved orotic acid protein domain with four disulfide bonds as the core. However, the Alvard shrimp from which the protein is derived comes from deep sea environment, compared with shallow sea, the protein has the characteristics of low temperature, high pressure, oligotrophy and the like, and the identity with the known shallow sea crustacean crustin is only about 40-50%.
Example 2
Preparation of recombinant proteins of Crus1 and thioredoxin (Trx)
1) Construction of plasmid pEtCrus1 expressing recombinant protein of Crus 1:
according to the amino acid sequence of Crus1 obtained as described above, a sequence of Crus1 free of signal peptide was synthesized by Beijing Liuhua Dagenescience, Inc., and the corresponding signal peptide was removed, i.e., ATGATGCTGGTCCGTGTTG CGACCGTCTTGCTGGCA GTGCTGGTG GCGACGACGGAGGCA was removed, and ligated to expression vector pET28a (available from "Novagen, USA) to construct recombinant plasmid pEtCrus 1. DNA sequencing of the recombinant plasmid revealed that pEtCrus1 contains a gene encoding the sequence of Crus 1.
2) Induced expression and purification of recombinant Crus1 protein (rCrus1)
The above plasmid pEt was introducedCrus1 Escherichia coli BL21(DE3) (purchased from "Beijing Quanjin biol., Beijing) was transformed by a conventional method, cultured on LB solid medium containing kanamycin (50ug/ml) for 18 to 24 hours, and the transformant was picked and named as BL21/pEtCrus 1. BL21/pEtCrus1 was cultured overnight in LB liquid medium containing kanamycin (50 ug/ml); 5ml of overnight culture was added to 500ml of fresh LB liquid medium containing kanamycin (50ug/ml), and cultured at 37 ℃ with shaking at a rotation speed of 180rpm to OD600At 0.6, IPTG with a final concentration of 0.06mM is added, the culture is continued at 16 ℃ for 12-16h with shaking at a rotating speed of 120rpm, and then the culture is centrifuged at 6000g for 10min at 4 ℃, and the bacterial liquid is collected. Adding 30ml lysis solution, freezing at-80 deg.C for more than 2h, thawing at 4 deg.C, and ultrasonic crushing for 60min until the bacterial suspension becomes clear. The bacterial solution was centrifuged at 4 ℃ for 30min at 10000g, and the supernatant was recovered. The protein in the supernatant was recovered and purified using Ni-NTA protein purification resin (available from QIAGEN, Germany), and the purified protein was suspended in PBS buffer and named rCrus 1.
The lysate is 9.5mM NaH with final concentration2PO4、40mM Na2HPO40.5M NaCl and 8M urea, pH 9.5.
The PBS comprises the following components in percentage by weight: 0.8% NaCl, 0.02% KCl, 0.358% Na2HPO4.12H2O,0.024%NaH2PO4And the balance of distilled water.
The LB solid medium comprises the following components: 10g/L of tryptone, 5g/L of yeast extract, 10g/L of sodium chloride and 15g/L of agarose
The LB liquid medium comprises the following components: 10g/L of tryptone, 5g/L of yeast extract and 10g/L of sodium chloride.
3) Inducible expression and purification of recombinant Trx protein (rTrx)
pET32a (purchased from Novagen, USA) was transformed into E.coli BL21(DE3) by the method described above, cultured on LB solid medium containing ampicillin (100ug/ml) for 18-24 hours, and the transformant was picked and named BL21/pET32 a. BL21/pET32a was cultured overnight in LB liquid medium containing ampicillin (100 ug/ml); 5ml of overnight culture medium was added to the flask00ml of fresh LB liquid medium containing ampicillin (100ug/ml) was cultured at 37 ℃ with shaking at a rotation speed of 180rpm to OD600At 0.6, IPTG with a final concentration of 0.6mM is added, the culture is continued at 37 ℃ for 4-5h with shaking at a rotation speed of 180rpm, and then the culture is centrifuged at 6000g for 10min at 4 ℃, and the bacterial liquid is collected. Adding 30ml lysis solution, freezing at-80 deg.C for more than 2h, thawing at 4 deg.C, and ultrasonic crushing for 60min until the bacterial suspension becomes clear. The bacterial solution was centrifuged at 4 ℃ for 30min at 10000g, and the supernatant was recovered. The protein in the supernatant was recovered and purified using a Ni-NTA protein purification resin (available from QIAGEN, Germany), and the purified protein was suspended in PBS buffer and named rTrx.
Example 3
Bactericidal application of rCrus1
Step 1) preparation of the bacterial suspension
Streptococcus iniae (Streptococcus iniae) was cultured in TSB medium (purchased from Bomb organisms, Qingdao), and Micrococcus luteus (Micrococcus luteus), Bacillus wiedmannii and Vibrio harveyi (Vibrio harveyi) were cultured to OD in LB liquid medium600At 0.8, and then centrifuged (5000g, 4 ℃,10 min), the cells were collected and suspended in PBS to a final concentration of 106cfu/ml, namely the bacterial suspension.
The streptococcus iniae G26 is preserved in China general microbiological culture Collection center (CGMCC), and the address is as follows: west road No.1, north chen, chaoyang, beijing, No. 3, zip code, 100101. The preservation number is: CGMCC No.1984, preservation date 2007.3.22; and is described in the patent application No. 201210255992.3.
The micrococcus luteus is purchased from China general microbiological culture Collection center (CGMCC), the addresses of which are as above, and the preservation numbers are as follows: CGMCC No. 1.8591.
The Bacillus wiedmannii SR52 is preserved in China Center for Type Culture Collection (CCTCC) with the address: wuhan university. The preservation number is: CCTCC M2019788, preservation date 2019.10.9.
The Vibrio harveyi strain is a well-known strain, and is described in Zhang, W., and L.Sun.2007.cloning, characterization and molecular application of a beta-agarase gene from Vibrio sp.strain V134.appl.environ.Microbiol.73:2825-2831 in the following documents.
Step 2) sterilization detection of rCrus1
200 μ l of the Bacillus wiedmannii, Streptococcus iniae, Micrococcus luteus and Vibrio harveyi suspensions obtained in the step 1) above were placed in 1.5ml centrifuge tubes, respectively, and rCrus1, rTrx or PBS (control) was added to the bacterial suspension to a final concentration of 20 μ M, and each group was paralleled to detect the bactericidal activity (see Table 1).
TABLE 1
Figure BDA0002956316280000041
As can be seen from Table 1, rCrus1 obtained by the method has certain bactericidal capacity on Bacillus cereus, Streptococcus iniae or Micrococcus luteus.
Then, the experimental group and the control group obtained by aiming at the rCrus1 pair of bacillus cereus, streptococcus iniae or micrococcus luteus are incubated for 2 hours at room temperature, and the bacterial suspension is diluted by PBS gradient and coated on an LB solid culture medium plate. Colonies were counted after 18-20 hours incubation at 28 ℃. The results show that the survival numbers of Bacillus wiedmannii, streptococcus iniae and micrococcus luteus were significantly reduced after incubation with rCrus1, whereas the control protein rTrx had no effect on the survival of Bacillus wiedmannii, micrococcus luteus and streptococcus iniae (fig. 1).
The bactericidal effect of rCrus1 was detected as seen in fig. 1. Bacillus wiedmannii (A1), Streptococcus iniae (Streptococcus iniae) (B1) and Micrococcus luteus (Micrococcus luteus) (C1) were incubated with rCrus1, rTrx or PBS (control) for 2h and then plated on LB solid medium plates. The survival of the bacteria was observed after 18-20 hours of incubation at 28 ℃ and the number of bacteria (colony forming units, CFUs) was counted. Data maps were generated from CFUs (A2, B2, and C2). The experimental data are the results of three parallel experiments. P < 0.01. These results indicate that the rCrus1 of the present invention has significant bacterial killing ability against bacillus cereus, streptococcus iniae, or micrococcus luteus.
Sequence listing
<110> oceanographic institute of Chinese academy of sciences
<120> application of deep sea chitin peptide
<160> 1
<170> SIPOSequenceListing 1.0
<210> 1
<211> 89
<212> PRT
<213> 2 Ambystoma laterale x Ambystoma jeffersonianum
<400> 1
Ser Pro Ser Thr Pro Gln Asp Ser Arg Ser Cys Arg Tyr Trp Cys Arg
1 5 10 15
Lys Pro Asp Asn Ala Val Tyr Cys Cys Asp Phe Gly Asn Phe Pro Pro
20 25 30
Ile Pro Val Pro Val Pro Glu His Lys Gly Val Cys Pro Glu Val Arg
35 40 45
Pro Cys Pro Gly Ile Lys Phe Ser Pro Gln Leu Cys Pro His Asp Gly
50 55 60
His Cys Lys Arg Asn Glu Lys Cys Cys Tyr Asp Ser Cys Leu Glu His
65 70 75 80
His Ala Cys Lys Leu Ala Ser Asn Ala
85

Claims (4)

1. The application of deep sea crustin is characterized in that: the deep sea crustin is applied to preparing a sterilization preparation.
2. Use according to claim 1, characterized in that: the deep sea crustin is an amino acid sequence shown in SEQ ID No.1.
3. Use according to claim 1 or 2, characterized in that: the deep sea crustin is a recombinant protein expressed in escherichia coli.
4. Use according to claim 1, characterized in that: the bacteria are Bacillus wiedmannii, Streptococcus iniae or Micrococcus luteus.
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Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102140130A (en) * 2010-11-12 2011-08-03 中国科学院海洋研究所 Antibacterial peptide and use thereof
CN102586260A (en) * 2012-03-13 2012-07-18 中国科学院海洋研究所 PtCrustin-1 gene of Portunus trituberculatus, encoding protein of PtCrustin-1 gene and application of PtCrustin-1 gene
CN105859863A (en) * 2016-06-12 2016-08-17 广西壮族自治区水产科学研究院 Litopenaeus vannamei antimicrobial peptide-CrustinB gene and preparation and application of recombinant protein of gene
CN107937406A (en) * 2017-11-30 2018-04-20 宁波大学 A kind of application of Portunus trituberculatus Miers novel C rustin genes and its recombinant protein
CN109134635A (en) * 2018-08-07 2019-01-04 内蒙古科技大学 A kind of antibacterial peptide and the preparation method and application thereof with composite bio-active

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102140130A (en) * 2010-11-12 2011-08-03 中国科学院海洋研究所 Antibacterial peptide and use thereof
CN102586260A (en) * 2012-03-13 2012-07-18 中国科学院海洋研究所 PtCrustin-1 gene of Portunus trituberculatus, encoding protein of PtCrustin-1 gene and application of PtCrustin-1 gene
CN105859863A (en) * 2016-06-12 2016-08-17 广西壮族自治区水产科学研究院 Litopenaeus vannamei antimicrobial peptide-CrustinB gene and preparation and application of recombinant protein of gene
CN107937406A (en) * 2017-11-30 2018-04-20 宁波大学 A kind of application of Portunus trituberculatus Miers novel C rustin genes and its recombinant protein
CN109134635A (en) * 2018-08-07 2019-01-04 内蒙古科技大学 A kind of antibacterial peptide and the preparation method and application thereof with composite bio-active

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
PREMRUETHAI SUPUNGUL等: "Cloning, expression and antimicrobial activity of crustinPm1, a major isoform of crustin, from the black tiger shrimp Penaeus monodon", 《DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY》 *
任海波等: "三疣梭子蟹抗菌肽Scygonadin基因的克隆与序列分析", 《生物学杂志》 *

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