CN111718992A - Application of RTN3 or mRNA or gene coding RTN3 protein as coronary heart disease inflammation detection marker - Google Patents

Application of RTN3 or mRNA or gene coding RTN3 protein as coronary heart disease inflammation detection marker Download PDF

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CN111718992A
CN111718992A CN202010639032.1A CN202010639032A CN111718992A CN 111718992 A CN111718992 A CN 111718992A CN 202010639032 A CN202010639032 A CN 202010639032A CN 111718992 A CN111718992 A CN 111718992A
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rtn3
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项荣
黄皓
范亮亮
陈雅琴
王晨宇
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Central South University
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Abstract

The invention relates to application of RTN3 protein as a coronary heart disease inflammatory response detection marker, belonging to the field of biological medicine. The invention provides a new application of RTN3 protein or mRNA coding RTN3 protein or gene coding RTN3 protein in serving as a coronary heart disease inflammation detection marker. The amino acid sequence of the RTN3 protein is shown as SEQ ID No. 1. The sequence of the mRNA for coding the RTN3 protein is shown as SEQ ID No. 2. The CDS sequence of the gene coding the RTN3 protein is shown as SEQ ID No. 3. A large number of experiments prove that the possibility of generating the inflammatory response of the coronary heart disease of an individual is higher when the expression level of RTN3 is increased, and vice versa. Therefore, the content of the RTN3 protein can directly reflect the development process of the inflammatory reaction of the coronary heart disease to a certain extent.

Description

Application of RTN3 or mRNA or gene coding RTN3 protein as coronary heart disease inflammation detection marker
Technical Field
The invention relates to application of RTN3 as a coronary heart disease inflammation detection marker, belonging to the field of biological medicine.
Background
Coronary atherosclerotic heart disease (coronary heart disease) is a multifactorial induced disease that is the leading cause of morbidity and mortality among various diseases. The main cause of coronary heart disease is the formation of lipid plaques due to the accumulation of large amounts of apolipoprotein B-containing lipoproteins and other substances, and the accumulation of these lipid plaques in blood vessels leads to a complex series of cellular events in the coronary artery wall and the occurrence of chronic vascular inflammation, which in turn drives the development and enlargement of lipid plaques to form a vicious circle. In the later stage of coronary heart disease development, the plaque gradually increases and causes the coronary artery lumen to narrow, and because the existence of the plaque is unstable, once the plaque breaks, the plaque can cause thrombus and cause a plurality of serious diseases, so the development is extremely dangerous.
Vascular inflammation is an important pathological reaction in the process of coronary heart disease. Inflammation is part of the complex biological response of human tissue to harmful stimuli (e.g., pathogens, damaged cells, or irritants), and is a protective response involving immune cells, blood vessels, and molecular mediators. Inflammation functions to eliminate the original cause of cellular injury, to remove necrotic cells and tissue damaged during the original injury and inflammation, and to initiate tissue repair. Thus, in general, the inflammatory response is beneficial to the body. In some cases, however, the occurrence of an inflammatory response is detrimental. Some favorable factors in the inflammatory reaction may also be harmful to the body under certain pathological conditions. Inflammatory responses occur without involvement of cytokines. Inflammatory cytokine is a cytokine secreted from immune cells and some other cells promoting inflammation, including interleukins, tumor necrosis factor, interferons, granulocyte-macrophage colony stimulating factor, and the like. Inflammatory cytokines play an important role in the initiation of inflammatory responses and in the regulation of host defense against pathogens that mediate innate immune responses, [ Li Zhi, Wangwei, Zhang Guang, etc. ] the expression and significance of serum inflammatory cytokines in patients with coronary heart disease [ J ]. J.China J.Oakuchi J.2018, 38(7): 1559. 1560.] [ Youefi-Ahma dioxide A, Ebrahimi-Barou S, Niknia S, et al. therapeutic effects of combination of planar and subcutaneous tissue analysis in TNBS-induced collagen ratio [ J ]. Biomedicine & Pharmacotherapy,2020,125:109949.] [ Wumin, Wang. application of proinflammatory factors and anti-inflammatory factors in research of coronary heart disease [ J.J.Pharmacologne & Pharmacology, 87-90, 2010-IL 1.] and TNF. alpha.6. TNF [ II, 2010-6, etc. ], and anti-inflammatory cytokines such as IL-10 and TGF-beta, etc., play an important role in a variety of chronic inflammatory reactions including coronary heart disease inflammation, and the increase and decrease of their content can be used to reflect the degree of inflammation. The C-reactive protein is an acute protein which rises sharply in plasma when an organism is infected or tissues are damaged, the content of the C-reactive protein can be used as a non-specific inflammatory reaction marker, and the C-reactive protein is directly involved in cardiovascular diseases such as inflammation and coronary heart disease, so the C-reactive protein is a strongest powerful predictive factor and risk factor of the cardiovascular diseases.
The RTN3(Reticulon 3) protein, also known as endoplasmic reticulum-associated protein 3, belongs to a family of Reticulon (RTN) proteins that have a Reticulon Homology Domain (RHD) at their C-terminus and are relatively conserved among species. Among them, the RTN family is divided into four members, RTN1-4, in humans and mice. These family members are primarily localized to the ER and play an important role in various physiological processes of the cell. Although current research on RTN3 focuses primarily on the processes involved in functioning of the nervous system and playing a role in the development of various neurodegenerative diseases, the function of RTN3 is not limited to this.
Disclosure of Invention
The invention aims to provide a new application of RTN3 protein or mRNA coding RTN3 protein or gene coding RTN3 protein in serving as a coronary heart disease inflammation detection marker.
The coronary heart disease inflammation refers to an inflammatory reaction occurring in the occurrence and development process of coronary atherosclerotic heart disease.
The novel application provided by the invention is to predict the degree of occurrence and/or development of an inflammatory response of an individual by detecting the change of the expression level of RTN3 in a sample.
The amino acid sequence of the RTN3 gene coding protein is shown in SEQ ID No. 1.
The cDNA sequence of the protein coded by the RTN3 gene can be obtained by reverse transcription of the mRNA sequence coded by the RTN3 protein and can be directly translated into the protein amino acid sequence of the RTN3, so that the cDNA sequence of the protein coded by the RTN3 gene can also be used as a marker for detecting the coronary heart disease inflammation.
The sequence of the mRNA for coding the RTN3 protein is shown as SEQ ID No. 2.
The Ensembl number of the gene for coding the RTN3 protein is ENSG00000133318, and the CDS sequence of the gene is shown as SEQ ID No. 3.
Preferably, the detection marker is a serum diagnostic marker, a plasma diagnostic marker or a tissue cell diagnostic marker.
The invention also provides an application of the RTN3 or mRNA encoding RTN3 protein or gene encoding RTN3 protein in preparing an inflammation detection reagent, wherein the amino acid sequence of the RTN3 is shown as SEQ ID No. 1; the mRNA sequence of the coding RTN3 protein is shown as SEQ ID No. 2; the CDS sequence of the gene coding the RTN3 protein is shown as SEQ ID No. 3.
The invention also provides a kit for detecting coronary heart disease inflammation, which comprises: a reagent for specifically detecting the expression level of RTN3 protein, a reagent for specifically detecting the mRNA level of the coding RTN3 protein or a reagent for specifically detecting the gene level of the coding RTN3 protein.
Preferably, the detecting comprises: colloidal gold immunochromatography, immunoblotting, immunohistochemistry, immunofluorescence, flow cytometry, enzyme linked immunosorbent assay, nucleic acid probe assay or qPCR assay.
Preferably, the detector is selected from: specific antibody against RTN3 protein, specific primer for amplifying mRNA or gene encoding RTN3 protein, probe or chip for detecting mRNA or gene encoding RTN3 protein.
For example, a primer specific to the RTN3 gene was designed to detect the RTN3 gene using polymerase chain reaction, and a primer specific to the RTN3 gene was designed to detect the mRNA of RTN3 using reverse transcription polymerase chain reaction.
Preferably, the sequence of the specific primer for amplifying the mRNA or gene encoding the RTN3 protein is shown as SEQ ID No.4 and SEQ ID No. 5.
Preferably, the specific primers for amplifying the mRNA or gene encoding the RTN3 protein further comprise specific primers for fluorescent quantitative PCR amplification of an internal reference gene GAPDH, and the sequences are shown as SEQ ID No.6 and SEQ ID No. 7.
The detection method of the RTN3 gene or mRNA can be realized by a conventional gene chip or a nucleic acid probe or a technical method such as PCR amplification or gene sequencing. For example [ Huang M, Wang J, Torre E, et al. SAVER: genexpression recovery for single-cell RNA sequencing [ J ]. Nature methods,2018,15(7): 539-) ], [ Brich S, Bozzi F, Perron F, et al. Fluorescences In Simple Hybridization (FISH) properties of minute and intellectual BAP1, CDKN2A, and NF2 gene deletions in property synthesis [ J ]. model Pathology,2019:1-11 ], [ Chen C Y, an R W, Ma T, et al. effects of coding of probability of natural genes [ J ], [ 12W ], Ma T, et al. experiments of coding of sample of family of the same documents [ 113, 2016 ], [ 2016, et al, expression of family J ], (2016, expression of natural genes, expression of genes, and so on.
Preferably, the test sample is human serum sample, whole blood sample and tissue cell sample, and cell line of human other sources.
The invention also provides application of the kit in preparation of a coronary heart disease inflammation detection reagent.
The expression level of RTN3 according to the present invention includes the expression or content level of any one of the following (1), (2) and (3):
(1) RTN3 protein;
(2) mRNA encoding the RTN3 protein;
(3) a gene encoding the RTN3 protein.
The specific method comprises the following steps: collecting a sample of the subject and comparing the expression level of the RTN3 protein or the mRNA or the gene in a normal control or standard sample. According to the comparison result, whether the coronary heart disease inflammatory reaction exists in the sample to be detected or not is detected/predicted according to the following method: if the expression level of the RTN3 protein or the mRNA or the gene in the sample to be tested is higher than the normal expression level of the RTN3 protein or the mRNA or the gene in the normal control or the standard sample, the more likely the sample to be tested is to generate the inflammatory reaction of the coronary heart disease; on the contrary, when the expression level of the RTN3 protein or the mRNA or the gene in the sample to be tested is lower than or equal to the normal expression level of the RTN3 protein or the mRNA or the gene in the normal control or the standard sample, the sample to be tested does not have coronary heart disease inflammatory reaction or the degree of coronary heart disease inflammatory reaction is possibly low; the control is a normal cell line of healthy human or human origin; preferably, the sample to be tested is serum or normal cell lysate. Wherein, the sample of the testee comprises but is not limited to a serum sample, a whole blood sample, a tissue cell sample and a related cell lysate of the patient.
According to previous researches, RTN3 is found to be involved in a plurality of processes of coronary atherosclerotic heart disease, plays an important role in inflammatory reaction and macrophage autophagy, and can be used as an important marker for development of inflammatory reaction of coronary heart disease. By detecting the RTN3 level of the patient, the possibility and/or the degree of the coronary heart disease inflammation of the patient can be detected/predicted.
A large number of experiments prove that the higher the expression level of RTN3, the higher the possibility of generating the inflammatory reaction of the coronary heart disease of an individual is, and vice versa. Therefore, the content of the RTN3 protein can directly reflect the generation and development process of the inflammatory reaction of the coronary heart disease to a certain extent.
Drawings
FIG. 1 is a graph showing the statistics of RTN3 expression in peripheral blood mononuclear cells of patients with coronary heart disease and normal persons measured by flow cytometry; (. indicates p < 0.05; data are expressed as (Mean ± SEM).
FIG. 2 shows the detection of RTN3 expression in peripheral blood mononuclear cells of patients with coronary heart disease and normal persons by immunoblotting.
FIG. 3 is a statistical graph of the correlation of the log of serum C-reactive protein levels in clinically confirmed coronary heart disease patients with expression of RTN3 in peripheral blood mononuclear cells; the area within the dashed line represents the 95% confidence region of the regression curve.
FIG. 4 is a statistical chart of the results of partial inflammatory factor expression detection in HEK293 cells transfected with plasmids containing RTN3 coding fragments and negative control blank plasmid vectors by performing fluorescent quantitative PCR; (. x.) represents p <0.01, and (. x.) represents p < 0.001.
Detailed Description
The present invention will be described in detail with reference to examples. The experimental procedures used in the following examples are conventional unless otherwise specified.
Materials, reagents and the like used in the following examples are commercially available unless otherwise specified.
The amino acid sequence of the RTN3 protein involved in the following examples is shown as SEQ ID No.1 in the sequence table, and the coding gene sequence thereof is shown as SEQ ID No.3 in the sequence table.
Example 1 results of detecting expression of RTN3 protein in peripheral blood mononuclear cells of patients with coronary heart disease and normal persons
The test person: clinically confirmed coronary heart disease patients and control group normal human peripheral blood mononuclear cells
Through flow cytometry and immunoblotting, the expression difference of RTN3 protein in peripheral blood mononuclear cells of clinically confirmed coronary heart disease patients and control group normal persons is respectively detected, and relevant clinical test information of the patients is collected. The specific implementation steps are as follows:
(1) procedure for the preparation of the
First, mononuclear cells in human peripheral blood were extracted:
20mL of blood from a patient is taken and added to a 50mL centrifuge tube. Adding 120 μ L heparin sodium, and mixing to prevent coagulation. Then adding PBS buffer solution into the blood for 1:1 dilution;
preheating the human lymphocyte separation liquid in a 37 ℃ constant-temperature water bath box;
thirdly, subpackaging the preheated lymphocyte separation fluid into 4 centrifuge tubes with the volume of 5mL each, wherein the volume of each centrifuge tube is 15 mL;
(iv) slowly and slantingly adding the diluted blood sample to each small centrifuge tube containing the separation solution (taking care not to break the layering);
fifthly, centrifuging 4 small centrifuge tubes with the density gradient for 25min at 2000rpm (slowly increasing to 2000 rpm);
sixthly, after the centrifugation is finished, the separated human lymphocytes are cloudy between the first layer and the second layer in the centrifugal tube. Taking a total of 4mL of the layer up and down by using a pipette, collecting the layers together, and then centrifuging the layers at 2500rpm for 10 min;
the sediment at the bottom of the tube which is finally centrifuged is the needed cells.
Subsequently, a portion of the monocytes was examined by flow cytometry:
resuspending the cells in FACS buffer (1 × PBS/FCS/10% sodium azide) to adjust the cell concentration to 1-3 × 106/mL;
diluting the RTN3 antibody with 1% BSA at a ratio of 1:200 to label the mononuclear cells, gently shaking and uniformly mixing, and incubating at room temperature for 1 h;
③ after washing twice with PBS, labeling mononuclear cells (1% BSA 1:100) with fluorescent secondary antibody, incubating for 30min at 4 ℃ in the dark;
and fourthly, after two times of PBS washing, resuspending and centrifuging for 5min at 1500rpm, twice, and detecting by an up-flow cytometer (Beckman-CoulterXL-MCL). The data obtained by measuring 10000 cells were expressed as the mean fluorescence intensity value of the sample. The excitation light source is a 2W argon ion laser (the excitation wavelength is 488nm), and the emission wavelength is 570 nm. The assay data was analyzed using EXP032ADC Analysis software available from Beckmann-Coulter. The expression level of the cell surface protein was expressed as the average fluorescence intensity.
Another portion of the monocytes was used for immunoblot detection:
preparation of related reagents:
formulation of SDS-PAGE-15% separation gel (lower gel):
Figure RE-GDA0002643193200000061
formulation of SDS-PAGE-5% concentrated gel (top gel):
Figure RE-GDA0002643193200000062
c.10 × gel electrophoresis buffer:
Figure RE-GDA0002643193200000071
heating at 56 deg.C to dissolve, storing at room temperature, and diluting at 1X when using.
D. Electrophoresis transfer buffer:
Figure RE-GDA0002643193200000072
E. blocking buffer:
Figure RE-GDA0002643193200000073
preparing SDS-PAGE according to the formula;
thirdly, putting the sample and the protein Marker into a boiling water bath kettle to be heated for 2min, then taking out the sample, adding 20 mu L of sample into each hole, and performing electrophoresis for 2h at a constant voltage of 100V;
transferring the protein to a PVDF membrane by an electrotransfer method, and performing constant current electrophoresis for 1h at 200mA in a refrigerator at 4 ℃;
taking out the PVDF membrane, placing 50mL of blocking buffer solution in a refrigerator at 4 ℃ and sealing overnight by shaking;
sixthly, slightly washing the membrane by using a washing buffer TBST (10mM Tris-HCl pH8.0, 150mM NaCl, 0.05% Tween-20), sealing the membrane in a thin-film bag by using 2mL of RTN3 primary anti-dilution solution, and putting the thin-film bag on a shaking table to incubate in a refrigerator at 4 ℃ overnight;
seventhly, washing the TBST for 3 times for 10min each time;
sealing 2mL of anti-RTN 3 antibody secondary antibody diluent marked by horseradish peroxidase on the membrane in a film bag, and incubating for 2h on a shaking table;
ninthly, washing for 10min by TBST for 3 times;
the membrane was stained with ECL luminol and the bands were recorded using light sensitive X-ray film.
As a result, it was found that: as shown in figure 1-2, the expression level of RTN3 protein of peripheral blood mononuclear cells of patients with coronary heart disease is significantly increased compared with that of normal people in a control group through flow cytometry and immunoblotting detection, which indicates that the increase of RTN3 is closely related to the occurrence and development of coronary heart disease. Meanwhile, the data in fig. 3 show that, in patients with coronary heart disease, the logarithm of the content of the inflammatory marker C-reactive protein has a significant positive correlation with the expression of the RTN3 protein of peripheral blood mononuclear cells, i.e., the expression level of the RTN3 of the patients is increased, and the degree of the inflammatory reaction of the coronary heart disease in the patients is also enhanced. Therefore, the expression level of RTN3 is proved to be a detection marker of coronary heart disease inflammation, namely RTN3 protein or mRNA coding RTN3 protein or gene coding RTN3 protein can be used as a detection marker of coronary heart disease inflammation.
Example 2 detection of partial inflammatory indicators cytokines after overexpression of RTN3 in human embryonic Kidney cells 293(HEK293)
The test person: human HEK293 cell
The total RNA of the cells is extracted and the expression of the cell factor mRNA is detected by a cell transfection technology. The specific implementation steps are as follows:
(1) procedure for the preparation of the
The cultured cells were first transfected with a plasmid containing the coding fragment of RTN3 or a control plasmid blank vector, respectively, to allow overexpression of RTN3 in the experimental cells:
a transfection step may be performed for cells cultured in a 6-well cell culture plate when the density thereof grows to 70-80%;
changing the culture medium for each hole, and only reserving 2mL of new complete culture medium without the double antibody for each hole;
③ for each well of cells, prepare a sterilized 1.5mL centrifuge tube, add 150. mu.L of OPTI-MEM medium and 12. mu.L of Lipofectamine 2000 reagent into the tube, and blow the mixture gently;
fourthly, preparing a sterilized 1.5mL centrifuge tube, adding 150 mu L of OPTI-MEM culture medium and 14ug of plasmid DNA into the tube, and gently and evenly blowing;
fifthly, adding the diluted DNA-OPTI culture medium into the diluted Lipofectamine-OPTI culture medium, and gently and uniformly blowing;
standing and incubating for 5min at room temperature;
seventhly, the mixed DNA liposome is respectively added into each cell hole, is mixed evenly and is placed back into a constant temperature incubator at 37 ℃ to be cultured for 2 days continuously, and then the next experiment can be carried out.
Total RNA of the cells was then extracted:
adding a corresponding amount of beta mercaptoethanol (10 mu L of beta mercaptoethanol is added to every 1000 mu L of lysate and is added before each use) into a lysate (lysine Buffer), adding a corresponding amount of lysate into a cell hole, and scraping cells by using an enzyme-free cell scraper;
transferring the scraped cell lysate to an enzyme-free 1.5mL centrifuge tube by using an enzyme-free suction head, and putting the centrifuge tube into a 4 ℃ rotary instrument for rotary lysis for half an hour;
thirdly, adding 70 percent of absolute ethyl alcohol with the same volume into the centrifuge tube, shaking and mixing uniformly;
transferring the well mixed liquid into a centrifugal column, and centrifuging for 12,000 Xg for 15s at room temperature by using a centrifuge;
fifthly, discarding the waste liquid in the collecting pipe, adding 700 mu L of Wash Buffer I into a centrifugal column, and centrifuging for 12,000 Xg for 15s at room temperature by using a centrifuge;
sixthly, discarding the collecting pipe and the waste liquid therein, and replacing with a new collecting pipe; adding 500 μ L WashBuffer II (added with corresponding amount of absolute ethanol in advance) into the centrifugal column, and centrifuging at room temperature for 12,000 Xg for 15s by using a centrifuge;
seventhly, repeating the step one time;
eighthly, discarding the waste liquid in the collecting pipe, centrifuging the waste liquid at room temperature for 12,000 Xg by an empty adsorption column in a centrifuge, and drying an adsorption column membrane for 1 min;
ninthly, abandoning the collecting tube, sleeving the centrifugal column into a new 1.5mL RNA-free enzyme centrifugal tube, adding 50 mu L RNA-free enzyme water into the adsorption column, standing for 1min at room temperature, and centrifuging for 12,000 Xg for 2min at room temperature by using a centrifuge;
the liquid in the centrifugal tube is stored at the positive ion (R) and is the whole blood leucocyte RNA solution of the sample, and the sample is stored for a long time at minus 80 ℃.
Taking the RNA sample obtained above for reverse transcription to obtain a cDNA library sample:
establishing a reverse transcription synthesis reaction system (20 mu L system): the reaction system is as follows:
Figure RE-GDA0002643193200000091
Figure RE-GDA0002643193200000101
establishing a reverse transcription synthesis reaction program: the procedure was as follows:
Figure RE-GDA0002643193200000102
and (3) taking out the cDNA library sample obtained above, and carrying out real-time fluorescent quantitative PCR amplification and detection:
at least 3 times of reaction systems (25 mu L systems) are needed for each sample, wherein the reaction system is as follows:
Figure RE-GDA0002643193200000103
secondly, placing the reaction tube into a qPCR instrument, and setting corresponding groups and reaction procedures, wherein the procedures are as follows:
Figure RE-GDA0002643193200000104
Figure RE-GDA0002643193200000111
③ use 2(-△△CT)The method is used for comparing the difference of the mRNA expression quantity of the related inflammatory cytokine genes in the test sample and the control group.
As a result, it was found that: as shown in FIG. 4, after the RTN3 is over-expressed, compared with cells transfected with blank plasmid vectors in a control group, the expression of proinflammatory cytokines such as IL-1 beta, IL-6 and TNF-alpha is remarkably increased, and the expression of inflammation-inhibiting cytokines such as TGF-beta and IL-10 is remarkably reduced, wherein the inflammatory factors are closely related to coronary heart disease inflammation. The data in fig. 4 suggest that coronary heart disease inflammatory response is significantly elevated after RTN3 is elevated.
The foregoing examples are set forth to illustrate the present invention more clearly and are not to be construed as limiting the scope of the invention, which is defined in the appended claims to which the invention pertains, as modified in all equivalent forms, by those skilled in the art after reading the present invention.
SEQUENCE LISTING
<110> university of south-middle school
<120> use of RTN3 or mRNA coding for RTN3 protein or gene coding for RTN3 protein as coronary heart disease inflammation detection marker
Application in recording
<130>1
<160>7
<170>PatentIn version 3.5
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<212>PRT
<213> Artificial Synthesis
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Tyr Pro Met Ser Ala Leu Leu Ser Arg Gln Phe Ser His Thr Asn Ala
305 310 315 320
Ala Leu Glu Glu Val Ser Arg Cys Val Asn Asp Met His Asn Phe Thr
325 330 335
Asn Glu Ile Leu Thr Trp Asp Leu Val Pro Gln Val Lys Gln Gln Thr
340 345 350
Asp Lys Ser Ser Asp Cys Ile Thr Lys Thr Thr Gly Leu Asp Met Ser
355 360 365
Glu Tyr Asn Ser Glu Ile Pro Val Val Asn Leu Lys ThrSer Thr His
370 375 380
Gln Lys Thr Pro Val Cys Ser Ile Asp Gly Ser Thr Pro Ile Thr Lys
385 390 395 400
Ser Thr Gly Asp Trp Ala Glu Ala Ser Leu Gln Gln Glu Asn Ala Ile
405 410 415
Thr Gly Lys Pro Val Pro Asp Ser Leu Asn Ser Thr Lys Glu Phe Ser
420 425 430
Ile Lys Gly Val Gln Gly Asn Met Gln Lys Gln Asp Asp Thr Leu Ala
435 440 445
Glu Leu Pro Gly Ser Pro Pro Glu Lys Cys Asp Ser Leu Gly Ser Gly
450 455 460
Val Ala Thr Val Lys Val Val Leu Pro Asp Asp His Leu Lys Asp Glu
465 470 475 480
Met Asp Trp Gln Ser Ser Ala Leu Gly Glu Ile Thr Glu Ala Asp Ser
485 490 495
Ser Gly Glu Ser Asp Asp Thr Val Ile Glu Asp Ile Thr Ala Asp Thr
500 505 510
Ser Phe Glu Asn Asn Lys Ile Gln Ala Glu Lys Pro Val Ser Ile Pro
515 520 525
Ser Ala Val Val Lys Thr Gly Glu Arg Glu Ile Lys Glu Ile ProSer
530 535 540
Cys Glu Arg Glu Glu Lys Thr Ser Lys Asn Phe Glu Glu Leu Val Ser
545 550 555 560
Asp Ser Glu Leu His Gln Asp Gln Pro Asp Ile Leu Gly Arg Ser Pro
565 570 575
Ala Ser Glu Ala Ala Cys Ser Lys Val Pro Asp Thr Asn Val Ser Leu
580 585 590
Glu Asp Val Ser Glu Val Ala Pro Glu Lys Pro Ile Thr Thr Glu Asn
595 600 605
Pro Lys Leu Pro Ser Thr Val Ser Pro Asn Val Phe Asn Glu Thr Glu
610 615 620
Phe Ser Leu Asn Val Thr Thr Ser Ala Tyr Leu Glu Ser Leu His Gly
625 630 635 640
Lys Asn Val Lys His Ile Asp Asp Ser Ser Pro Glu Asp Leu Ile Ala
645 650 655
Ala Phe Thr Glu Thr Arg Asp Lys Gly Ile Val Asp Ser Glu Arg Asn
660 665 670
Ala Phe Lys Ala Ile Ser Glu Lys Met Thr Asp Phe Lys Thr Thr Pro
675 680 685
Pro Val Glu Val Leu His Glu Asn Glu Ser Gly Gly Ser Glu Ile Lys
690 695 700
Asp Ile Gly Ser Lys Tyr Ser Glu Gln Ser Lys Glu Thr Asn Gly Ser
705 710 715 720
Glu Pro Leu Gly Val Phe Pro Thr Gln Gly Thr Pro Val Ala Ser Leu
725 730 735
Asp Leu Glu Gln Glu Gln Leu Thr Ile Lys Ala Leu Lys Glu Leu Gly
740 745 750
Glu Arg Gln Val Glu Lys Ser Thr Ser Ala Gln Arg Asp Ala Glu Leu
755 760 765
Pro Ser Glu Glu Val Leu Lys Gln Thr Phe Thr Phe Ala Pro Glu Ser
770 775 780
Trp Pro Gln Arg Ser Tyr Asp Ile Leu Glu Arg Asn Val Lys Asn Gly
785 790 795 800
Ser Asp Leu Gly Ile Ser Gln Lys Pro Ile Thr Ile Arg Glu Thr Thr
805 810 815
Arg Val Asp Ala Val Ser Ser Leu Ser Lys Thr Glu Leu Val Lys Lys
820 825 830
His Val Leu Ala Arg Leu Leu Thr Asp Phe Ser Val His Asp Leu Ile
835 840 845
Phe Trp Arg Asp Val Lys Lys Thr Gly Phe Val Phe Gly Thr Thr Leu
850 855 860
Ile Met Leu Leu Ser Leu Ala Ala Phe Ser Val Ile Ser Val Val Ser
865 870 875 880
Tyr Leu Ile Leu Ala Leu Leu Ser Val Thr Ile Ser Phe Arg Ile Tyr
885 890 895
Lys Ser Val Ile Gln Ala Val Gln Lys Ser Glu Glu Gly His Pro Phe
900 905 910
Lys Ala Tyr Leu Asp Val Asp Ile Thr Leu Ser Ser Glu Ala Phe His
915 920 925
Asn Tyr Met Asn Ala Ala Met Val His Ile Asn Arg Ala Leu Lys Leu
930 935 940
Ile Ile Arg Leu Phe Leu Val Glu Asp Leu Val Asp Ser Leu Lys Leu
945 950 955 960
Ala Val Phe Met Trp Leu Met Thr Tyr Val Gly Ala Val Phe Asn Gly
965 970 975
Ile Thr Leu Leu Ile Leu Ala Glu Leu Leu Ile Phe Ser Val Pro Ile
980 985 990
Val Tyr Glu Lys Tyr Lys Thr Gln Ile Asp His Tyr Val Gly Ile Ala
995 1000 1005
Arg Asp Gln Thr Lys Ser Ile Val Glu Lys Ile Gln Ala Lys Leu
1010 1015 1020
Pro Gly Ile Ala Lys Lys Lys Ala Glu
1025 1030
<210>2
<211>4917
<212>DNA
<213> Artificial Synthesis
<400>2
agtctgtcgg agtctgtcct cggagcaggc ggagtaaagg gacttgagcg agccagttgc 60
cggattattc tatttcccct ccctctctcc cgccccgtat ctcttttcac ccttctccca 120
ccctcgctcg cgtagccatg gcggagccgt cggcggccac tcagtcccat tccatctcct 180
cgtcgtcctt cggagccgag ccgtccgcgc ccggcggcgg cgggagccca ggagcctgcc 240
ccgccctggg gacgaagagc tgcagctcct cctgtgcgga ttcctttgtt tcttcctctt 300
cctctcagcc tgtatctcta ttttcgacct cacaagaggg attgagctct ctttgctctg 360
atgagccatc ttcagaaatt atgacttctt cctttctttc atcttctgaa atacataaca 420
ctggccttac aatactacat ggagaaaaaa gccatgtgtt agggagccag cctattttag 480
ccaaagaagg aaaagaccac ttggatcttc tagatatgaa aaagatggaa aagcctcagg 540
ggaccagcaa caacgtatca gactcttcag tttctcttgc agcaggagtt cattgtgacc 600
gtccttctat tccagccagt ttcccagagc atcctgcttt tctctcaaag aaaattggtc 660
aagtggaaga gcaaatagat aaagagacca agaacccaaa tggggtatca agtagggagg 720
ctaaaactgc attggatgct gatgacagat tcactttgct gacagcccag aaaccaccta 780
ctgagtactc taaggtagaa ggcatttata catattcttt gtctccatcc aaagtttcag 840
gagatgatgt tattgaaaag gattcccctg aatcaccatt tgaagtaatt attgacaaag 900
cagcatttga caaagaattt aaagactcat ataaggagag cacagatgat tttggtagct 960
ggtctgtgca cactgataaa gaatcatccg aagacatttc agagactaat gacaagcttt 1020
ttccactgag aaataaagag gcaggacgtt acccaatgtc tgcattgctc agtaggcagt 1080
tttcacacac aaatgcagca ctggaagagg tgtccagatg cgtgaatgat atgcataact 1140
ttactaacga aatactgact tgggatctgg ttccccaagt gaaacaacag accgataaat 1200
cttctgactg catcacaaaa actacaggac ttgacatgag tgaatataat tcagaaattc 1260
cagttgtaaa tcttaaaact agcactcatc agaaaactcc tgtatgttct attgatggga 1320
gcactcccat cactaaatca acaggtgatt gggcagaagc atctctccag caagaaaatg 1380
ctattactgg aaaacctgta cctgactctt tgaattccac aaaagaattc agtatcaaag 1440
gtgtgcaagg caatatgcag aaacaggatg acacacttgc agaattacct ggatctccac 1500
ctgagaaatg tgactctttg ggttctggag tggccacagt gaaagtggtt ttacctgatg 1560
accacctgaa agatgaaatg gactggcaga gctctgcatt gggagaaatc acagaagctg 1620
atagttctgg tgagtctgat gacacagtaa tagaggacat cacagcagat acatcatttg 1680
aaaataacaa aattcaggct gaaaaacctg tttccattcc aagtgctgtt gtaaaaacag 1740
gtgaaagaga aatcaaagag attcccagtt gtgagagaga agaaaaaaca tctaaaaact 1800
ttgaagaatt ggtcagtgac tctgagctgc atcaagatca gcctgatatt cttggaagga 1860
gtccagctag tgaggcagca tgttcaaaag tacccgatac gaatgtctcc ttagaagatg 1920
tgagtgaagt tgctcctgaa aagcctatta ctactgagaa ccccaaactt ccttcaacag 1980
tgtctccaaa tgtttttaat gagacagaat tctcattaaa tgtgacaaca tctgcctatt 2040
tggagtcatt acatgggaaa aatgttaaac atatagatga ttcctcccca gaggacctga 2100
tagcagcctt tacagaaacc agagataaag gaatagtaga tagtgaaaga aatgctttta 2160
aagcaatatc agagaagatg acagacttta aaacaactcc tcctgtagaa gtcttacatg 2220
aaaatgagtc cggtggttct gaaattaaag acattggaag caaatacagt gaacaaagca 2280
aagaaacaaa tggaagtgag cctctaggtg ttttccctac ccaaggtact ccagtagcat 2340
ctcttgactt agaacaagaa cagctcacaa ttaaggctct taaagaatta ggtgaaagac 2400
aggttgagaa gtcaacttct gcacagcgtg acgcagaatt gccttctgaa gaagtactga 2460
agcaaacttt cacatttgct ccagaatctt ggccacagag atcatatgac atcctagaac 2520
gtaatgtcaa gaatggatct gatcttggga tttcccagaa gcccatcact atcagagaaa 2580
ctactagggt agatgctgtt tccagcctta gcaagactga attggtaaaa aagcatgtcc 2640
tagcaagact tctgacagac ttctcagtgc acgatctgat tttctggaga gatgtgaaga 2700
agactgggtt tgtctttggc accacgctga tcatgctgct ttccctggca gctttcagtg 2760
tcatcagtgt ggtttcttac ctcatcctgg ctcttctctc tgtcaccatc agcttcagga 2820
tctacaagtc cgtcatccaa gctgtacaga agtcagaaga aggccatcca ttcaaagcct 2880
acctggacgt agacattact ctgtcctcag aagctttcca taattacatg aatgctgcca 2940
tggtgcacat caacagggcc ctgaaactca ttattcgtct ctttctggta gaagatctgg3000
ttgactcctt gaagctggct gtcttcatgt ggctgatgac ctatgttggt gctgttttta 3060
acggaatcac ccttctaatt cttgctgaac tgctcatttt cagtgtcccg attgtctatg 3120
agaagtacaa gacccagatt gatcactatg ttggcatcgc ccgagatcag accaagtcaa 3180
ttgttgaaaa gatccaagca aaactccctg gaatcgccaa aaaaaaggca gaataagtac 3240
atggaaacca gaaatgcaac agttactaaa acaccattta atagttataa cgtcgttact 3300
tgtactatga aggaaaatac tcagtgtcag cttgagcctg cattccaagc ttttttttta 3360
atttggtgtt ttctcccatc ctttcccttt aaccctcagt atcaagcaca aaaattgatg 3420
gactgataaa agaactatct tagaactcag aagaagaaag aatcaaattc ataggataag 3480
tcaatacctt aatggtggta gagcctttac ctgtagcttg aaaggggaaa gattggaggt 3540
aagagagaaa atgaaagaac acctctgggt ccttctgtcc agttttcagc actagtctta 3600
ctcagctatc cattatagtt ttgcccttaa gaagtcatga ttaacttatg aaaaaattat 3660
ttggggacag gagtgtgata ccttccttgg tttttttttg cagccctcaa atcctatctt 3720
cctgccccac aatgtgagca gctacccctg atactccttt tctttaatga tttaactatc 3780
aacttgataa ataacttata ggtgatagtg ataattcctg attccaagaa tgccatctga 3840
taaaaaagaa tagaaatgga aagtgggact gagagggagt cagcaggcat gctgcggtgg 3900
cggtcactcc ctctgccact atccccaggg aaggaaaggc tccgccattt gggaaagtgg 3960
tttctacgtc actggacacc ggttctgagc attagtttga gaactcgttc ccgaatgtgc 4020
tttcctccct ctcccctgcc cacctcaagt ttaataaata aggttgtact tttcttacta 4080
taaaataaat gtctgtaact gctgtgcact gctgtaaact tgttagagaa aaaaataacc 4140
tgcatgtggg ctcctcagtt attgagtttt tgtgatccta tctcagtctg ggggggaaca 4200
ttctcaagag gtgaaataca gaaagccttt ttttcttgat cttttcccga gattcaaatc 4260
tccgattccc atttgggggc aagttttttt cttcaccttc aatatgagaa ttcagcgaac 4320
ttgaaagaaa aatcatctgt gagttccttc aggttctcac tcatagtcat gatccttcag 4380
agggaatatg cactggcgag tttaaagtaa gggctatgat atttgatggt cccaaagtac 4440
ggcagctgca aaaagtagtg gaaggaaatt gtctacgtgt cttggaaaaa ttagttagga 4500
atttggatgg gtaaaaggta cccttgcctt actccatctt attttcttag ccccctttga 4560
gtgttttaac tggtttcatg tcctagtagg aagtgcattc tccatcctca tcctctgccc 4620
tcccaggaag tcagtgattg tctttttggg cttcccctcc aaaggacctt ctgcagtgga 4680
agtgccacat ccagttcttt tcttttgttg ctgctgtgtt tagataattg aagagatctt 4740
tgtgccacac aggatttttt ttttttttta agaaaaacct atagatgaaa aattactaat 4800
gaaactgtgt gtacgtgtct gtgcgtgcaa cataaaaata cagtagcacc taaggagctt 4860
gaatcttggt tcctgtaaaa tttcaaattg atgtggtatt aataaaaaaa aaaaaaa 4917
<210>3
<211>3099
<212>DNA
<213> Artificial Synthesis
<400>3
atggcggagc cgtcggcggc cactcagtcc cattccatct cctcgtcgtc cttcggagcc 60
gagccgtccg cgcccggcgg cggcgggagc ccaggagcct gccccgccct ggggacgaag 120
agctgcagct cctcctgtgc ggattccttt gtttcttcct cttcctctca gcctgtatct 180
ctattttcga cctcacaaga gggattgagc tctctttgct ctgatgagcc atcttcagaa 240
attatgactt cttcctttct ttcatcttct gaaatacata acactggcct tacaatacta 300
catggagaaa aaagccatgt gttagggagc cagcctattt tagccaaaga aggaaaagac 360
cacttggatc ttctagatat gaaaaagatg gaaaagcctc aggggaccag caacaacgta 420
tcagactctt cagtttctct tgcagcagga gttcattgtg accgtccttc tattccagcc 480
agtttcccag agcatcctgc ttttctctca aagaaaattg gtcaagtgga agagcaaata 540
gataaagaga ccaagaaccc aaatggggta tcaagtaggg aggctaaaac tgcattggat 600
gctgatgaca gattcacttt gctgacagcc cagaaaccac ctactgagta ctctaaggta 660
gaaggcattt atacatattc tttgtctcca tccaaagttt caggagatga tgttattgaa 720
aaggattccc ctgaatcacc atttgaagta attattgaca aagcagcatt tgacaaagaa 780
tttaaagact catataagga gagcacagat gattttggta gctggtctgt gcacactgat 840
aaagaatcat ccgaagacat ttcagagact aatgacaagc tttttccact gagaaataaa 900
gaggcaggac gttacccaat gtctgcattg ctcagtaggc agttttcaca cacaaatgca 960
gcactggaag aggtgtccag atgcgtgaat gatatgcata actttactaa cgaaatactg 1020
acttgggatc tggttcccca agtgaaacaa cagaccgata aatcttctga ctgcatcaca 1080
aaaactacag gacttgacat gagtgaatat aattcagaaa ttccagttgt aaatcttaaa 1140
actagcactc atcagaaaac tcctgtatgt tctattgatg ggagcactcc catcactaaa 1200
tcaacaggtg attgggcaga agcatctctc cagcaagaaa atgctattac tggaaaacct 1260
gtacctgact ctttgaattc cacaaaagaa ttcagtatca aaggtgtgca aggcaatatg 1320
cagaaacagg atgacacact tgcagaatta cctggatctc cacctgagaa atgtgactct 1380
ttgggttctg gagtggccac agtgaaagtg gttttacctg atgaccacct gaaagatgaa 1440
atggactggc agagctctgc attgggagaa atcacagaag ctgatagttc tggtgagtct 1500
gatgacacag taatagagga catcacagca gatacatcat ttgaaaataa caaaattcag 1560
gctgaaaaac ctgtttccat tccaagtgct gttgtaaaaa caggtgaaag agaaatcaaa 1620
gagattccca gttgtgagag agaagaaaaa acatctaaaa actttgaaga attggtcagt 1680
gactctgagc tgcatcaaga tcagcctgat attcttggaa ggagtccagc tagtgaggca 1740
gcatgttcaa aagtacccga tacgaatgtc tccttagaag atgtgagtga agttgctcct 1800
gaaaagccta ttactactga gaaccccaaa cttccttcaa cagtgtctcc aaatgttttt 1860
aatgagacag aattctcatt aaatgtgaca acatctgcct atttggagtc attacatggg 1920
aaaaatgtta aacatataga tgattcctcc ccagaggacc tgatagcagc ctttacagaa 1980
accagagata aaggaatagt agatagtgaa agaaatgctt ttaaagcaat atcagagaag 2040
atgacagact ttaaaacaac tcctcctgta gaagtcttac atgaaaatga gtccggtggt 2100
tctgaaatta aagacattgg aagcaaatac agtgaacaaa gcaaagaaac aaatggaagt 2160
gagcctctag gtgttttccc tacccaaggt actccagtag catctcttga cttagaacaa 2220
gaacagctca caattaaggc tcttaaagaa ttaggtgaaa gacaggttga gaagtcaact 2280
tctgcacagc gtgacgcaga attgccttct gaagaagtac tgaagcaaac tttcacattt 2340
gctccagaat cttggccaca gagatcatat gacatcctag aacgtaatgt caagaatgga 2400
tctgatcttg ggatttccca gaagcccatc actatcagag aaactactag ggtagatgct 2460
gtttccagcc ttagcaagac tgaattggta aaaaagcatg tcctagcaag acttctgaca 2520
gacttctcag tgcacgatct gattttctgg agagatgtga agaagactgg gtttgtcttt 2580
ggcaccacgc tgatcatgct gctttccctg gcagctttca gtgtcatcag tgtggtttct 2640
tacctcatcc tggctcttct ctctgtcacc atcagcttca ggatctacaa gtccgtcatc 2700
caagctgtac agaagtcaga agaaggccat ccattcaaag cctacctgga cgtagacatt 2760
actctgtcct cagaagcttt ccataattac atgaatgctg ccatggtgca catcaacagg 2820
gccctgaaac tcattattcg tctctttctg gtagaagatc tggttgactc cttgaagctg 2880
gctgtcttca tgtggctgat gacctatgtt ggtgctgttt ttaacggaat cacccttcta 2940
attcttgctg aactgctcat tttcagtgtc ccgattgtct atgagaagta caagacccag 3000
attgatcact atgttggcat cgcccgagat cagaccaagt caattgttga aaagatccaa 3060
gcaaaactcc ctggaatcgc caaaaaaaag gcagaataa 3099
<210>4
<211>20
<212>DNA
<213> Artificial Synthesis
<400>4
tggttgactc cttgaagctg 20
<210>5
<211>22
<212>DNA
<213> Artificial Synthesis
<400>5
gacaatcggg acactgaaaa tg 22
<210>6
<211>19
<212>DNA
<213> Artificial Synthesis
<400>6
acatcgctca gacaccatg 19
<210>7
<211>22
<212>DNA
<213> Artificial Synthesis
<400>7
tgtagttgag gtcaatgaag gg 22

Claims (10)

  1. The application of RTN3 or mRNA or gene coding RTN3 protein in serving as a marker for detecting coronary heart disease inflammation is characterized in that the amino acid sequence of RTN3 is shown as SEQ ID No. 1; the mRNA sequence of the coding RTN3 protein is shown as SEQ ID No. 2; the CDS sequence of the gene coding the RTN3 protein is shown as SEQ ID No. 3.
  2. 2. The use of claim 1, wherein the coronary heart disease inflammation is an inflammatory response that occurs during the development of coronary atherosclerotic heart disease.
  3. 3. The use of claim 1, wherein said detectable marker is a serum diagnostic marker, a plasma diagnostic marker or a tissue cell diagnostic marker.
  4. The application of RTN3 or mRNA or gene coding RTN3 protein in preparing a coronary heart disease inflammation detection reagent is characterized in that the amino acid sequence of the RTN3 is shown as SEQ ID No. 1; the mRNA sequence of the coding RTN3 protein is shown as SEQ ID No. 2; the CDS sequence of the gene coding the RTN3 protein is shown as SEQ ID No. 3.
  5. 5. A kit for detecting coronary heart disease inflammation, the kit comprising: a reagent for specifically detecting the expression level of RTN3 protein, a reagent for specifically detecting the mRNA level of the coding RTN3 protein or a reagent for specifically detecting the gene level of the coding RTN3 protein.
  6. 6. The kit of claim 5, wherein the detecting comprises: colloidal gold immunochromatography, immunoblotting, immunohistochemistry, immunofluorescence, flow cytometry, enzyme linked immunosorbent assay, nucleic acid probe assay or qPCR assay.
  7. 7. The kit of claim 5, wherein the test agent is selected from the group consisting of: specific antibody against RTN3 protein, specific primer for amplifying mRNA or gene encoding RTN3 protein, probe or chip for detecting mRNA or gene encoding RTN3 protein.
  8. 8. The kit according to claim 7, characterized in that the sequence of the specific primers for amplifying the mRNA or gene encoding the RTN3 protein is shown as SEQ ID No.4 and SEQ ID No. 5.
  9. 9. The kit according to claim 7, wherein the specific primers for amplifying the mRNA or gene encoding the RTN3 protein further comprise specific primers for fluorescent quantitative PCR amplification of the reference gene GAPDH, and the sequences are shown as SEQ ID No.6 and SEQ ID No. 7.
  10. 10. Use of the kit according to any one of claims 5 to 9 for the preparation of a reagent for the detection of inflammation in coronary heart disease.
CN202010639032.1A 2020-07-06 2020-07-06 Application of RTN3 or mRNA or gene coding RTN3 protein as coronary heart disease inflammation detection marker Pending CN111718992A (en)

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Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20100204058A1 (en) * 2009-01-28 2010-08-12 Howard Yuan-Hao Chang Profiling for Determination of Response to Treatment for Inflammatory Disease
US20190011456A1 (en) * 2017-07-05 2019-01-10 Memed Diagnostics Ltd. Signatures and determinants for diagnosing infections and methods of use thereof

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20100204058A1 (en) * 2009-01-28 2010-08-12 Howard Yuan-Hao Chang Profiling for Determination of Response to Treatment for Inflammatory Disease
US20190011456A1 (en) * 2017-07-05 2019-01-10 Memed Diagnostics Ltd. Signatures and determinants for diagnosing infections and methods of use thereof

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
YAQIN CHEN ET AL: "The potential role of RTN3 in monocyte recruitment and atherosclerosis", 《MOL CELL BIOCHEM》 *
刘瑾等: "小鼠RTN3基因mRNA和蛋白在小鼠中枢神经系统的分布模式", 《科学通报》 *

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Application publication date: 20200929