CN111690625B - Acetolactate synthase mutant protein with herbicide resistance and application thereof - Google Patents

Acetolactate synthase mutant protein with herbicide resistance and application thereof Download PDF

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CN111690625B
CN111690625B CN202010671852.9A CN202010671852A CN111690625B CN 111690625 B CN111690625 B CN 111690625B CN 202010671852 A CN202010671852 A CN 202010671852A CN 111690625 B CN111690625 B CN 111690625B
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胡茂龙
浦惠明
龙卫华
高建芹
张洁夫
陈松
彭琦
陈锋
付三雄
周晓婴
张维
王晓东
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Jiangsu Academy of Agricultural Sciences
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Abstract

The invention discloses an ALS mutant protein, wherein an ALS1 amino acid sequence of the ALS mutant protein is shown as SEQ ID NO:2, the ALS3 amino acid sequence is shown as SEQ ID No:4, respectively. The invention also discloses nucleic acid for coding the mutant protein, an expression cassette, a recombinant vector or a cell containing the nucleic acid. The invention also discloses application of the mutant protein, the nucleic acid, the expression cassette, the recombinant vector or the cell in herbicide resistance of plants. The invention also discloses a method for obtaining the herbicide-resistant plant and a method for identifying the herbicide-resistant plant. The invention relates to an ALS inhibitor herbicide acetolactate synthase mutant with double genes and double mutation sites, which is found for the first time in rape in China; experimental results of spraying ALS inhibitor herbicides tribenuron-methyl and mesosulfuron in fields show that plants still grow normally and fruit after 16 times of recommended use concentration for weed control is applied to rape DS3 containing the ALS mutant protein in the 3-4 leaf stage.

Description

Acetolactate synthase mutant protein with herbicide resistance and application thereof
Technical Field
The invention relates to the field of herbicide resistance of plants and molecular breeding, in particular to acetolactate synthase mutant protein with herbicide resistance and application thereof. More particularly, relates to a method for separating acetolactate synthase coding gene of cabbage type rape high herbicide resistance, constructing a vector and cultivating a plant with high herbicide resistance.
Background
Rape (Brassica napus L.) is one of the first major oil crops in China, and provides an edible oil source for more than half of the population in China. In recent years, with the development of rape planting in China from traditional labor-intensive to large-scale and mechanized production, effective weed control becomes an important link for the whole-course mechanized production and simplified cultivation of rape. Chemical weeding is an economic and effective means for controlling farmland weeds. Unfortunately, due to the lack of commercial herbicide-resistant rape varieties, the rape production and removal area in China is very limited. Developed countries in north america, europe and the like have long conducted chemical weeding by planting herbicide-resistant oilseed rape. The types of herbicide resistant varieties are mainly glyphosate resistant rape of Monsanto, phosphinothricin resistant rape of Bayer and imidazolinone resistant rape of Bassfu. The resistance genes are protected by international intellectual property rights, expensive special fees are paid in China for commercial planting, the production cost of rape is greatly increased, and the original purpose of planting herbicide-resistant crops is violated. Meanwhile, the glyphosate-resistant rape and the glufosinate-resistant rape are transgenic varieties, and are not approved for commercial planting in China and cannot be applied to production. The imidazolinone herbicide has long residue period in soil, can be used only in one-cropping areas, and cannot be registered and issued in Yangtze river basin multi-cropping areas of the main rape production area in China. Therefore, the creation of new herbicide-resistant rape germplasm which has independent intellectual property rights and is suitable for the production requirements of China and the excavation of the resistance genes have very important practical significance for the seed selection of the herbicide-resistant rape varieties.
Acetolactate synthase (ALS), also known as Acetohydroxyacid synthase (AHAS), is a key enzyme in the biosynthesis of 3 branched-chain amino Acids in plants and microorganisms (mccart JA, duggleby rg. Amino Acids,2006, 31. If the activity of this enzyme is inhibited or lost, the synthesis of valine, leucine and isoleucine of plants is hindered, the synthesis of protein is affected, and finally the growth of plants is hindered until death, so that various types of high-efficiency herbicides such as Sulfonylureas (SU), imidazolinones (IMI) and the like have been developed with ALS as an action target. The herbicides are commonly called ALS inhibitor herbicides or ALS herbicides, have the advantages of strong selectivity, wide weed control spectrum, low use dose, low toxicity to mammals and the like, are widely applied in production, and become the 2 nd class herbicides after glyphosate. However, the commercial ALS herbicides have a strong growth inhibitory effect on dicotyledonous crop rape, making them only applicable to monocotyledonous crops such as rice, wheat, corn, and the like. Therefore, the problem can be effectively solved by cultivating the resistant rape variety, widening the application range of the existing ALS herbicide. However, due to the lack of production of resistant germplasm or genes with production and application values, no commercial resistant rape varieties have been developed yet in China.
Mutations at amino acid positions of the target ALS protein of ALS herbicides can result in resistant plants, where the amino acid positions involved are Gly 95, ala 96, ala 122, pro 171, pro 196, pro 197, ala 205, asp 376, trp 537, trp548, trp 552, trp 557, trp 563, trp 574, ser 621, ser 627, ser 638, ser 653, gly 654, val 669, etc. (calculated as ALS amino acid positions in the model plant arabidopsis), which are reported in various crops (including rice, maize, wheat, sunflower, etc.), model plant arabidopsis thaliana, and weeds (Tan et ah, 2005, pest managsci, 61. It was found that the resistance effect of resistant plants depends on the position of the amino acid mutation on ALS, the kind of amino acid after mutation and the number of mutated amino acids (Yu et al, 2010, j Exp botanic, 61, 3925-3934). Meanwhile, the herbicide resistance effects generated by amino acid variation at the same position in different genetic backgrounds can also have significant difference, which is probably because different micro-effect genes in plants in different genetic backgrounds participate in the synergistic action of the herbicide resistance. Therefore, for crops with complex genetic background (such as rape), mutants with high herbicide resistance and substances (such as proteins, genes and the like) which really can play a decisive role are not designed in a targeted way by theory at present, and can only be obtained by relying on hard practice of researchers, particularly long-term screening and identification, and by means of luck. For the heterotetraploid crop rape, the situation is more complicated, and people can hardly predict whether the mutation of the ALS protein amino acid site can generate herbicide resistance in advance, whether the resistance level of the resistance mutation site has breeding utilization value, and whether the resistance germplasm or gene can be suitable for production practical value.
Disclosure of Invention
The purpose of the invention is as follows: the technical problem to be solved by the invention is to provide an acetolactate synthase mutant with herbicide resistance.
The technical problem to be solved by the invention is to provide nucleic acid for encoding the protein, an expression cassette, a vector, a cell and the like.
The technical problem to be solved by the present invention is to provide a method and use for obtaining plants with herbicide resistance.
The invention also aims to solve the technical problem of providing an identification method for judging whether plants are obtained by adopting the method.
The inventor finds a high-herbicide-resistance germplasm in a mutant library of rape N131 through two rounds of EMS mutagenesis by occasionally using tribenuron-methyl by luck through long-term and hard research practice, the acetolactate synthase mutant carried by the germplasm belongs to two-gene two-site mutation, and the encoded protein has high resistance to the herbicide, so that the rape is endowed with high resistance to the herbicide. Until the present patent application, no public reports on this type of rape mutant have been found at home and abroad.
Compared with other wild acetolactate synthase, the acetolactate synthase mutant has double-gene double-site mutation, and the gene coding the mutant enzyme is transferred or transformed into plants, so that the plants such as rape, arabidopsis and the like have the characteristic of high resistance to ALS inhibitor herbicides.
The technical scheme is as follows: in order to solve the technical problems, the technical scheme adopted by the invention is as follows: the present invention provides an ALS mutein for conferring herbicide resistance to plants, which changes the amino acid at position 182 of the ALS1 amino acid sequence from proline to leucine and the amino acid at position 556 of ALS3 from tryptophan to leucine. There has been no report showing that the above-mentioned double-gene double mutation in the genome derived from Brassica napus results in rape having a high resistance to ALS inhibitor herbicides.
Preferably, the ALS1 protein of the first aspect of the present invention has a Pro182Leu mutation, and the ALS3 protein has Trp556Leu, and in addition to the mutant plant screening or amplification method described in the embodiments of the present invention, it is within the ability of those skilled in the art to prepare proteins having amino acid residues substituted, added or deleted by changing the gene sequence encoding a known protein and introducing it into a vector, in the case where the protein sequence is known, and these methods are all conventional methods. In a particular embodiment of the invention, the ALS protein with herbicide resistance, whose ALS1 amino acid sequence is as set forth in SEQ ID NO:2, the ALS3 amino acid sequence is shown as SEQ ID NO:4, respectively. The protein is proved to be an acetolactate synthase insensitive to SU herbicides tribenuron-methyl (2- [ N- (4-methoxy-6-methyl-1, 3, 5-triazine-2-yl) -N-methylcarbamoylamino sulfonyl ] benzoic acid methyl ester) and methyldisulfuron (methyl-2 [3- (4, 6- = methoxypyrimidin-2-yl) ureidosulfonyl l-4-methylsulfonylaminobenzoate).
In a second aspect, the invention provides a nucleic acid encoding a protein according to the first aspect of the invention. In the present invention, the nucleic acid may be DNA or RNA, and among them, DNA is preferable. It is within the ability of those skilled in the art to obtain and optimize nucleic acids encoding the proteins of the first aspect of the invention by PCR, DNA recombination or artificial synthesis using conventional codon usage and host expression frequency, given knowledge of the encoded protein or nucleic acid sequence. Once the nucleic acid is obtained, it can be cloned into a vector, transformed or transfected into the corresponding cell, and then propagated through a conventional host cell, from which a large amount of the nucleic acid is isolated. Preferably the nucleic acid of the second aspect of the invention, which ALS1 nucleotide sequence is as set forth in SEQ ID NO:1, and an ALS3 nucleotide sequence is shown as SEQ ID NO:3, respectively. Specifically, the ALS1 nucleotide sequence of the DNA sequence of the invention is subjected to point mutation at the +545 th position, the nucleotide is mutated from C to T, the ALS3 nucleotide is subjected to point mutation at the +1667 th position, and the nucleotide is changed from G to T.
In addition, the wild type brassica napus before mutation of the present invention is the wild type brassica napus line N131, and 3 functional ALS genes (Genebank accession numbers Z11524, Z11525, Z11526) coexist in the brassica napus genome.
The third aspect of the invention includes an expression cassette, recombinant vector or cell comprising the nucleic acid of the second aspect described above.
The fourth aspect of the present invention also includes the use of the above-described herbicide-resistant ALS protein, nucleic acid, expression cassette, recombinant vector or cell for herbicide resistance in plants.
Wherein the plant is rape or Arabidopsis thaliana.
The fifth aspect of the present invention also includes a method of obtaining a herbicide resistant plant, comprising the steps of:
1) Allowing the plant to comprise a nucleic acid of the invention; or
2) Allowing the plant to express said protein.
The method comprises the steps of transgenosis, hybridization, backcross or asexual propagation and the like.
The sixth aspect of the present invention includes a method for identifying a plant, wherein the plant is a plant comprising said nucleic acid, a plant expressing said protein or a plant obtained by said method, comprising the steps of:
1) Determining whether said plant comprises said nucleic acid; or the like, or, alternatively,
2) Determining whether said plant expresses said protein.
The invention also comprises the steps of specifically transferring the gene coding the acetolactate synthase into wild rape through hybridization, spraying ALS inhibitor herbicides in the seedling stage of the transferred rape and the wild rape, treating for 3 weeks to ensure that all wild rape plants die, and transferring to obtain rape plants containing the mutant gene coding the acetolactate synthase and all survival; the gene coding acetolactate synthase is transformed into arabidopsis, ALS inhibitor herbicides are sprayed at the seedling stage of the transgenic arabidopsis and the wild arabidopsis, after 3 weeks of treatment, all wild arabidopsis plants die, and all transgenic arabidopsis plants survive. Therefore, plants containing the gene encoding acetolactate synthase according to the present invention have the property of being resistant to ALS inhibitor herbicides.
Has the advantages that: compared with the prior art, the invention has the following advantages and effects:
1) The invention is a cabbage type rape high resistance ALS inhibitor herbicide acetolactate synthase mutant with double genes and double mutation sites which is found for the first time in rape in China, and the nucleotide sequence of the coding gene of the acetolactate synthase mutant can obviously improve the tolerance of other plants which have no resistance to ALS inhibitor herbicides to the ALS inhibitor herbicides;
2) The experimental result of spraying the ALS inhibitor herbicide tribenuron-methyl-disulfuron in the field indicates that the rape DS3 containing the ALS mutant protein of the invention is applied with 16 times of the recommended use concentration of weed control in the 3-4 leaf period (the tribenuron-methyl is 360g a.i.ha) -1 And the weight of mesosulfuron-methyl is 180g a.i.ha -1 ) After that, the plants still grow normally and are fruitful, while wild type rape is applied with 1 time of weed control recommended concentration in 3-4 leaf stage (22.5g a.i.ha. Tribenuron-methyl) -1 And the content of mesosulfuron-methyl was 11.25g a.i.ha -1 ) Death of the whole plant was observed after 3 weeks.
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FIG. 1 shows that the ALS inhibitor herbicide resistant rape mutant plant DS3 of the invention is found in a rape field;
FIG. 2 inhibition of ALS enzyme activity in vitro by tribenuron-methyl at different concentrations for wild type and mutant;
FIG. 3 in vitro inhibition of ALS enzyme activity by Mesosulfuron on wild-type and mutant at various concentrations;
FIG. 4PCR amplification of the ALS1 gene of oilseed rape; lane 1 shows DNA molecular weight standard, with fragments of 500bp, 800bp, 1200bp, 2000bp, 3000bp, and 4500bp sequentially from small to large; lanes 2 to 4 are DNA of N131, lanes 5 to 7 are DNA of EM28, lanes 8 to 10 are DNA of DS3, 3 replicates per sample; lane 11 is control water.
FIG. 5PCR amplification of the ALS2 gene of oilseed rape; lane 1, DNA molecular weight standards, fragments from small to large as in FIG. 4; lanes 2 to 4 are DNA of N131, lanes 5 to 7 are DNA of EM28, lanes 8 to 10 are DNA of DS3, 3 replicates per sample; lane 11 is control water;
FIG. 6PCR amplification of the ALS3 gene of oilseed rape; lane 1, DNA molecular weight standards, fragments from small to large as in FIG. 4; lanes 2 to 4 are DNA of N131, lanes 5 to 7 are DNA of EM28, lanes 8 to 10 are DNA of DS3, 3 replicates per sample; lane 11 is control water.
Detailed Description
Embodiments of the present invention will be described in detail below with reference to examples, but it will be understood by those skilled in the art that the following examples are only illustrative of the present invention and should not be construed as limiting the scope of the present invention. The examples, in which specific conditions are not specified, were conducted under conventional conditions or conditions recommended by the manufacturer. The reagents or instruments used are not indicated by the manufacturer, and are all conventional products commercially available.
Example 1: creation process of cabbage type rape acetolactate synthase mutant with high herbicide resistance
Before rape sowing, ethyl Methanesulfonate (EMS) mutagenesis treatment is carried out on a wild rape strain N131 (publicly known and commonly used, see Puhuimin and the like, jiangsu agricultural science, 2010, 26 (6): 1432-1434), and the specific treatment process is as follows: 1 day before sowing, 0.5kg of N131 seeds are put into a nylon mesh bag, soaked in a container filled with clear water for 12h, the nylon mesh bag is hung on a high place until the water is basically drained, then the nylon mesh bag is placed in 0.4 percent EMS solution (v/v) for treatment for 8h, the treated seeds are washed with running water for 4h, the nylon mesh bag is hung on the high place again, the water is drained, and then the seeds (Mo) are immediately broadcast in a 6X 50m isolation greenhouse with isolation conditions. In spring, rape is isolated and kept pure by a nylon mesh cover after flowering, and mature M is harvested at the end of 5 months 1 And (4) seeds. At the beginning of 10 months, adopting a group mixing method to mix M 1 The seeds are sowed in a 6x 50m isolation greenhouse with isolation conditions. After the rape blooms in the next spring, the rape is isolated by a nylon mesh enclosure to keep pure, and M is harvested in summer 2 And (5) seed generation. Autumn sowing M 2 And thirdly, when the vegetable seedlings grow to 3-4 leaf stages, spraying sulfonylurea herbicide tribenuron-methyl (2 times of recommended use concentration for weed control) to screen herbicide-resistant mutants. After 3 weeks of treatment, more than 20 seedlings were found to survive in the field, and the rest rapes died. After the survival vegetable seedlings grow to 5-6 leaf stage, moving to a rape breeding field, bagging and self-recovery to obtain M 3 And (4) seeds. In a light culture room, for M 3 And (3) identifying the resistance effect in the seedling stage of the seeds, and finding that the strain with the number of EM28 (preservation number: CGMCC No. 14299) has stable resistance and other characters are similar to wild type N131. The seeds of the EM28 plant are preserved in the China general microbiological culture Collection center (CGMCC) in 2017 at 19.06 months, and the address: west road No.1, north chen, chaoyang district, beijing, zip code: 100101, the preservation number is CGMCC No.14299, the classification name of the strain is:brassica napus (Brassica napus). Genetic studies found that the resistance trait of EM28 is an incompletely dominant trait controlled by 1 nuclear gene, and when the resistance gene in EM28 appeared homozygous, its resistance effect was 3-4 times higher than the recommended use concentration for tribenuron-methyl herbicide weed control, because EM28 leaves showed signs of growth inhibition after 4 times the recommended use concentration for weed control (table 1). Subsequent research in hybrid rape variety breeding finds that when the resistance character of EM28 is introduced into the CMS restoring line by a conventional breeding means, the CMS restoring line is matched with the sterile line, and the bred resistant hybrid combination F 1 The resistance genotype is expressed as a heterozygote type, the resistance effect of the heterozygote type is 1.5 to 2 times of the recommended concentration of herbicide for weed control, which causes a great risk in the popularization and application of the bred herbicide-resistant hybrid rape varieties in production, because when farmers use the herbicide for field weed control, if the herbicide is not used properly or is sprayed unevenly, the actually used herbicide concentration is easily caused to exceed the hybrid F 1 The resistance effect range of (A) causes the rape to generate herbicide phytotoxicity symptoms. Therefore, the application of the resistance character of EM28 in the seed selection of herbicide-resistant rape varieties has certain limitation.
Therefore, herbicide-resistant rape germplasm or resources with higher resistance effect are expected to meet the requirement of herbicide-resistant rape variety breeding. The EM28 seeds are propagated, EMS mutagenesis is carried out on the resistant material EM28 seeds again, high-concentration herbicide screening is combined, 8 times of tribenuron-methyl weed control recommended use concentration is sprayed on the field herbicide, and the specific EMS mutagenesis flow, screening and identification processes are the same as the above. We have fortunately found that after 3 weeks of treatment with high concentration of tribenuron-methyl herbicide, the DS3 seedlings grew well in the field (FIG. 1), and the seeds of the plants were harvested and stored after they matured. So far, we obtained a brassica napus acetolactate synthase mutant DS3 with high herbicide resistance, and deposited the brassica napus acetolactate synthase mutant DS3 in 2017 at 19.06 months in the common microorganism center of the china committee for culture collection of microorganisms (CGMCC), address: west way No.1 hospital No. 3, north beijing, chaoyang district, zip code: 100101, the preservation number is CGMCC No.14298, the classification name of the strain is: brassica napus (Brassica napus).
Example 2: herbicide resistance identification
The resistance identification test respectively adopts two methods of field identification and greenhouse pot experiment to identify and evaluate the resistance effect of the resistant mutants EM28 and DS 3. The rape field identification test is carried out in a rape isolated breeding area of agricultural academy of sciences of Jiangsu province, and the greenhouse pot culture test is carried out in a constant temperature culture room. Wild type N131 (publicly known and used, see Puhuimin et al, jiangsu agricultural science, 2010, 26 (6): 1432-1434), EM28 and DS3 of the invention are sown and grow to 3-4 leaf seedlings, SU herbicides tribenuron methyl (2- [ N- (4-methoxy-6-methyl-1, 3, 5-triazine-2-yl) -N-methylcarbamoylamino sulfonyl ] methyl benzoate) methyl disulfuron (methyl-2- [3- (4, 6- = methoxypyrimidin-2-yl) ureidosulfonyl l-4-methylsulfonyl aminobenzoate) with different concentrations are respectively sprayed on the control material to be treated. After 3 weeks of spraying, the resistance effect of the seedlings at different application concentrations was determined according to their growth performance, and the results are shown in Table 1. As can be seen from Table 1, the resistant material DS3 is the most resistant to the SU herbicides tribenuron-methyl and mesosulfuron, the concentration of the resistance effect is 12-16 times of the recommended use concentration of the herbicide for weed control, the resistance effect is far more than that of EM28 for the two herbicides, and the concentration of the EM28 resistance effect is 3-4 times of the recommended use concentration of the herbicide for weed control. Therefore, we believe that the high resistance material DS3 is more valuable than EM28 in oilseed rape breeding.
TABLE 1 resistance Performance after 3 rape treatments with different concentrations of herbicide
Figure BDA0002579182860000071
And (4) surface note: 1X represents the recommended use concentration of 1 time of herbicide weed control, and so on, wherein the recommended use concentration of 1 time of tribenuron-methyl herbicide weed control is 22.5g a.i.ha -1 The recommended concentration of 1-fold of mesosulfuron herbicide for weed control is 11.25g a.i.ha -1 (ii) a R represents that the rape plants after the herbicide treatment grow well and have noThe manifestation of phytotoxicity; r is - The growth of the rape plants is inhibited to a certain extent after the herbicide treatment, but the plants can not die and can fruit normally; s represents that the growth of the rape plants is seriously inhibited after the herbicide treatment, the phytotoxicity is obvious, and finally the plants die (the same is used below).
Example 3: ALS enzyme activity in vitro assay
DS3 is phenotypically highly resistant to SU class herbicides, so this class of herbicides was selected for use in vitro enzyme activity ex vivo assays comparing differences in resistance to herbicides between DS3, EM28 and the original wild type N131. The assay is according to the method of Singh et al (Singh BK, et al, analytical Biochemistry,1988, 171. Specifically, 0.2g of each leaf sample was ground and pulverized in a mortar with liquid nitrogen, and the ground sample was added to an initial enzyme extract [100mM K ] containing 4.5ml 2 HPO 4 、0.5mM MgCl 2 0.5mM thiamine pyrophosphate (TPP), 10. Mu.M Flavin Adenine Dinucleotide (FAD), 10mM sodium pyruvate, 10% (v/v) glycerol, 1mM dithiothreitol, 1mM phenylmethylsulfonyl fluoride (PMSF), 0.5% (w/v) polyvinylpyrrolidone]In (b), the mixture was centrifuged at 12000rpm for 20min at 4 ℃. Collecting supernatant, adding equal volume of saturated (NH) 4 ) 2 SO 4 After the mixture was left on ice for 30min, the mixture was centrifuged at 12000rpm for 20min at 4 ℃ and the supernatant was discarded, 1mL of the primary enzyme extract was added thereto, and the mixture was shaken and dissolved to obtain ALS enzyme solution for each sample. To 200. Mu.L of the extracted ALS enzyme solution were added 360. Mu.L of 50mM hepes-NaOH (pH = 7.5) enzyme reaction buffer, 80. Mu.L of 20mM TPP, 80. Mu.L of 200. Mu.MFAD, and 80. Mu.L of 2M sodium pyruvate +200mM MgCl 2 Mixing with tribenuron-methyl and mesosulfuron-methyl herbicides of different concentrations, reacting at 37 deg.C for 1 hr, adding 160 μ L of 3M H 2 SO 4 The reaction is terminated and decarboxylation is carried out for 15min at 60 ℃. Then 780. Mu.L of 5.5% alpha-naphthol solution and 780. Mu.L of 0.55% creatine were added, color was developed at 65 ℃ for 15min, colorimetry was conducted at 530nm, absorbance was read, and enzyme activity was calculated based on the standard curve. The ALS enzyme activity of the control without added herbicide was recorded as 100%, respectively, and the effect of tribenuron-methyl and mesosulfuron herbicides on the ALS enzyme activity of DS3, EM28 and the original wild type N131 was calculated.
The results are shown in FIGS. 2 and 3, whenWhen SU herbicides tribenuron-methyl and mesosulfuron are added to the enzymatic reaction, the ALS enzymes of DS3 and EM28 both appear to be resistant to the herbicide compared to wild-type N131, but there is a significant difference in their resistance to the herbicide, showing a different tendency to decrease with increasing herbicide concentration. For example, when the concentration of tribenuron-methyl herbicide is 10 mu mol L -1 In this case, the ALS enzyme activity in DS3 was about 83% of the control (not treated with herbicide), and the ALS enzyme activity in EM28 was about 51% of the control; when the concentration of the tribenuron-methyl herbicide is 20 mu mol L -1 In this case, the ALS enzyme activity in DS3 was about 80% of the control, and in this case, the ALS enzyme activity in EM28 was only about 46% of the control; when the concentration of the mesosulfuron-methyl herbicide reaches 10 mu mol L -1 In this case, the ALS enzyme activity of DS3 was about 72% of that of the control, and in this case, the ALS enzyme activity of EM28 was reduced to about 44%. The above results indicate that the ALS enzyme in mutant DS3 is significantly less sensitive to herbicides than the ALS enzyme in EM28, thereby conferring greater herbicide resistance to DS3 than EM 28.
Example 4: ALS Gene cloning
3 functional ALS genes (Genebank accession numbers Z11524, Z11525 and Z11526) coexist in the Brassica napus genome, and 3 PCR primers were designed based on the 3 ALS gene sequences. ALS1 primer 1: gtggatcaactgttga and primer 2: AGAGATGAAGCTGGTGATC. ALS2 primer 1: gagttgcgagaaaatttgctt and primer 2: TTGATTATTCTATGCTCTCTTCTG. ALS3 primer 1: atggttagagagagagagagagagagagagagaga and primer 2: GGTCGCACTAAGTACTGAGAG. Leaf genome DNA (Selenolone, etc., chinese oil crop science, 2011, 33 (4): 331-337) is extracted by a CTAB method, and wild type and mutant ALS1, ALS2 and ALS3 genes are cloned by PCR. A50. Mu.L PCR reaction system was prepared according to the instructions of kit KOD-Plus for high fidelity DNA polymerase from Toyo Boseki (Shanghai) Biotech Co., ltd. Performing amplification on an MJ Research PTC-200 PCR instrument, wherein the reaction program is pre-denaturation at 94 ℃ for 5min; denaturation at 94 ℃ for 30s, annealing at 55 ℃ for 30s, and extension at 72 ℃ for 2.5min for 35 cycles. The product was subjected to blunt-end addition of A, separated by 1.2% (V/W) agarose gel electrophoresis (FIGS. 4, 5, and 6), purified and recovered by using an agarose gel DNA recovery kit (catalog No. DP 209) manufactured by Beijing Tiangen, ligated to a cloning vector pEASY-T1 (purchased from Beijing TransGen Biotechnology Co., ltd.), and heat-shock-transformed into DH 5. Alpha. Positive clones were sequenced by blue-white screening and colony PCR identification in Nanjing Kingsrey Bio Inc. Sequencing results show that the ALS2 gene in the mutant DS3 has NO base mutation, but the ALS1 gene and the ALS3 gene have point mutation, wherein the +545 th position of the ALS1 gene has point mutation, the nucleotide is mutated from C to T, and the nucleotide sequence is shown as SEQ ID NO:1, leading to the mutation of proline (P) at position 182 of a corresponding coded protein into leucine (L), wherein the amino acid sequence is shown as SEQ ID NO:2 is shown in the specification; the ALS3 gene has point mutation at the position +1667, the nucleotide is changed from G to T, and the nucleotide sequence is shown as SEQ ID NO:3, resulting in the 556 th amino acid change from tryptophan (W) to leucine (L) of the corresponding encoded protein, the amino acid sequence being as shown in SEQ ID NO:4, that is, in the mutant strain DS3, the amino acid substitution of both Pro182Leu of ALS1 and Trp556Leu of ALS3 occurred, and 1 site mutation was added as compared with EM28 (P182L).
Example 5: expression analysis of acetolactate synthase mutant encoding gene in wild type rape
The acetolactate synthase mutant coding gene in the DS3 is introduced into other wild type rape varieties or lines which have no resistance to ALS herbicides by a cross breeding method. Briefly, a hybrid combination was prepared with DS3 and restorer lines 3075R (Puhuimin et al, 2002, jiangsu agricultural science, 4-33-34) and 3018R (Puhuimin et al, 1999, jiangsu agricultural science, 6, 32-33), respectively, and 2F were harvested in the year 1 Seeds are planted in the vernalization/culture room with additional generations, single plants with consistent growth are selected in the flowering phase and are bagged for selfing, and F is harvested 2 The seeds were sown in Lishui plant science base, nongkoseh, jiangsu province, of Nanjing, and each F 2 Seeding 20 rows in colony, taking F in seedling stage 2 Individual leaves of the population were harvested, DNA was extracted, ALS1 and ALS3 genes were PCR amplified, and the products were purified, recovered and sequenced as in example 4. Screening for homozygous F having acetolactate synthase mutant encoding Gene in DS3 based on sequencing results 2 And (3) a single strain, namely the ALS1 sequence of the single strain is shown as SEQ ID NO:2, the nucleotide sequence of ALS3 is shown as SEQ ID NO:4, respectively. F for each selection in rape flowering 2 Bagging and selfing the single plantTo obtain F 3 And (4) seeds. Following the procedure of example 2, field identification and greenhouse potting test pair F 3 And (5) identifying the seedling resistance. As a result, it was found that all of the candidates F were treated with tribenuron-methyl and mesosulfuron-methyl herbicides at a concentration of 12X or less for 3 weeks 3 The growth state of the rape seedlings is good, the growth of the rape treated by 16X is inhibited to a certain extent, the growth is inhibited, but the plants do not die, all the control materials die, and the result shows that the coding gene homozygotic F carrying the acetolactate synthase mutant in DS3 3 The concentration of the effect of the strains on the resistance of both ALS herbicides was between 12 and 16 times the recommended use concentration for herbicide weed control (table 2).
TABLE 2 resistance Performance after treatment of selected oilseed rape F3 lines with different concentrations of herbicide
Figure BDA0002579182860000101
Example 6: expression of acetolactate synthase mutant encoding gene in Arabidopsis thaliana
The coding genes of the two mutant enzymes in the DS3 are respectively transferred into wild type Arabidopsis plants by adopting a conventional Agrobacterium tumefaciens mediated method, and then transgenic Arabidopsis plants which are homozygous at the same time with the coding genes of the two mutant enzymes in the DS3 are selected in the progeny for carrying out herbicide phenotype identification through hybridization of two transgenic lines. Briefly, specific primers were designed based on the ALS1 and ALS3 gene sequences, respectively, ALS1 primer 3:
5′CGCGGTACCtcatctctctctcctcctaacc 3' (underlined sequence is KpnI enzyme recognition site, same below) and ALS1 primer 4:5' CGCACTAGTGATCACCAGCTTCATCTCTC 3' (the underlined sequence is the SpeI enzyme recognition site, the same below); ALS3 primer 3:
5′CGCGGTACCctctcctctcatctaacct 3' and ALS3 primer 4:
5′CGCACTAGTCTCTCAGTACTTAGTGCGACC3'. The genomic DNA of the mutant DS3 is used as a template, and the genes P182L and W556L encoding the target mutant enzymes are obtained by PCR amplification. The PCR product was recovered, cloned, and sequenced as in example 4 to obtain a bandA recombinant T vector having a gene encoding a mutant enzyme. The target gene-containing fragment obtained by double digestion of the T vector with KpnI and SpeI was recovered and ligated to the pCAMBIA1390 vector (purchased from CAMBI, australia) which was also double digested to obtain a recombinant plant expression vector. And transforming the constructed recombinant vector into escherichia coli DH5 alpha, and extracting a plasmid for enzyme digestion and sequencing detection. And (3) transforming the recombinant vector containing the target gene, which is detected to be correct, into the agrobacterium EH105 alpha strain, extracting a plasmid, and performing PCR (polymerase chain reaction) and enzyme digestion identification. The obtained recombinant strain is cultured, and an agrobacterium infection inflorescence method (flower thinning) is utilized to transform arabidopsis thaliana. In the T0 generation, after antibiotic screening is carried out on a culture medium, a T1 generation plant is obtained and transplanted into a pot, the pot is placed in an artificial incubator to grow, and a T3 generation homozygous transgenic plant line of each gene is obtained through PCR screening and expanding propagation. Preparing hybridization combination in the flowering phase of T3 generation line, and harvesting 2F 1 Seed, PCR screening and expanding propagation to obtain homozygous transgenic strain F with mutant enzyme coding gene in DS3 3 . Following the procedure of example 2, field identification and greenhouse potting test pair F 3 And (5) identifying the seedling stage resistance. After 3 weeks of treatment with tribenuron-methyl and mesosulfuron-methyl herbicides at concentrations below 12X, all transgenic Arabidopsis thaliana F 3 The growth state of seedlings is good, the growth of seedlings after 16X treatment is inhibited to a certain extent, but plants do not die, and all the seedlings of arabidopsis thaliana (WT) which is not transgenic die, which shows that transgenic arabidopsis thaliana F which is homozygous for the coding gene carrying the acetolactate synthase mutant in DS3 3 The resistance effect concentration of the families to both SU herbicides was between 12-16 times the recommended use concentration for herbicide weed control (table 3).
TABLE 3 resistance Performance after different concentrations of herbicide-treated transgenic Arabidopsis thaliana crossed F3 lines
Figure BDA0002579182860000111
Figure BDA0002579182860000121
Although specific embodiments of the invention have been described in detail, it will be appreciated by those skilled in the art that various modifications and alternatives to those details could be developed in light of the overall teachings of the disclosure, and are within the scope of the invention. The full scope of the invention is given by the appended claims and any equivalents thereof.
Sequence listing
<110> agricultural science and academy of Jiangsu province
<120> acetolactate synthase mutein having herbicide resistance and use thereof
<160> 14
<170> SIPOSequenceListing 1.0
<210> 1
<211> 1968
<212> DNA
<213> ALS1 mutant Gene (ALS 1)
<400> 1
atggcggcgg caacatcgtc ttctccgatc tccttaaccg ctaaaccttc ttccaaatcc 60
cctctaccca tttccagatt ctcccttccc ttctccttaa ccccacagaa agactcctcc 120
cgtctccacc gtcctctcgc catctccgcc gttctcaact cacccgtcaa tgtcgcacct 180
ccttcccctg aaaaaaccga caagaacaag actttcgtct cccgctacgc tcccgacgag 240
ccccgcaagg gtgctgatat cctcgtcgaa gccctcgagc gtcaaggcgt cgaaaccgtc 300
tttgcttatc ccggaggtgc ttccatggag atccaccaag ccttgactcg ctcctccacc 360
atccgtaacg tccttccccg tcacgaacaa ggaggagtct tcgccgccga gggttacgct 420
cgttcctccg gcaaaccggg aatctgcata gccacttcgg gtcccggagc taccaacctc 480
gtcagcgggt tagcagacgc gatgcttgac agtgttcctc ttgtcgccat tacaggacag 540
gtccttcgcc ggatgatcgg tactgacgcc ttccaagaga caccaatcgt tgaggtaacg 600
aggtctatta cgaaacataa ctatttggtg atggatgttg atgacatacc taggatcgtt 660
caagaagctt tctttctagc tacttccggt agacccggac cggttttggt tgatgttcct 720
aaggatattc agcagcagct tgcgattcct aactgggatc aacctatgcg cttacctggc 780
tacatgtcta ggttgcctca gcctccggaa gtttctcagt taggtcagat cgttaggttg 840
atctcggagt ctaagaggcc tgttttgtac gttggtggtg gaagcttgaa ctcgagtgaa 900
gaactgggga gatttgtcga gcttactggg atccccgttg cgagtacttt gatggggctt 960
ggctcttatc cttgtaacga tgagttgtcc ctgcagatgc ttggcatgca cgggactgtg 1020
tatgctaact acgctgtgga gcatagtgat ttgttgctgg cgtttggtgt taggtttgat 1080
gaccgtgtca cgggaaagct cgaggctttc gctagcaggg ctaaaattgt gcacatagac 1140
attgattctg ctgagattgg gaagaataag acacctcacg tgtctgtgtg tggtgatgta 1200
aagctggctt tgcaagggat gaacaaggtt cttgagaacc gggcggagga gctcaagctt 1260
gatttcggtg tttggaggag tgagttgagc gagcagaaac agaagttccc tttgagcttc 1320
aaaacgtttg gagaagccat tcctccgcag tacgcgattc agatcctcga cgagctaacc 1380
gaagggaagg caattatcag tactggtgtt ggacagcatc agatgtgggc ggcgcagttt 1440
tacaagtaca ggaagccgag acagtggctg tcgtcatcag gcctcggagc tatgggtttt 1500
ggacttcctg ctgcgattgg agcgtctgtg gcgaaccctg atgcgattgt tgtggatatt 1560
gacggtgatg gaagcttcat aatgaacgtt caagagctgg ccacaatccg tgtagagaat 1620
cttcctgtga agatactctt gttaaacaac cagcatcttg ggatggtcat gcaatgggaa 1680
gatcggttct acaaagctaa cagagctcac acttatctcg gggacccggc aagggagaac 1740
gagatcttcc ctaacatgct gcagtttgca ggagcttgcg ggattccagc tgcgagagtg 1800
acgaagaaag aagaactccg agaagctatt cagacaatgc tggatacacc aggaccatac 1860
ctgttggatg tgatatgtcc gcaccaagaa catgtgttac cgatgatccc aagtggtggc 1920
actttcaaag atgtaataac agaaggggat ggtcgcacta agtactga 1968
<210> 2
<211> 655
<212> PRT
<213> ALS1 mutant Gene (ALS 1)
<400> 2
Met Ala Ala Ala Thr Ser Ser Ser Pro Ile Ser Leu Thr Ala Lys Pro
1 5 10 15
Ser Ser Lys Ser Pro Leu Pro Ile Ser Arg Phe Ser Leu Pro Phe Ser
20 25 30
Leu Thr Pro Gln Lys Asp Ser Ser Arg Leu His Arg Pro Leu Ala Ile
35 40 45
Ser Ala Val Leu Asn Ser Pro Val Asn Val Ala Pro Pro Ser Pro Glu
50 55 60
Lys Thr Asp Lys Asn Lys Thr Phe Val Ser Arg Tyr Ala Pro Asp Glu
65 70 75 80
Pro Arg Lys Gly Ala Asp Ile Leu Val Glu Ala Leu Glu Arg Gln Gly
85 90 95
Val Glu Thr Val Phe Ala Tyr Pro Gly Gly Ala Ser Met Glu Ile His
100 105 110
Gln Ala Leu Thr Arg Ser Ser Thr Ile Arg Asn Val Leu Pro Arg His
115 120 125
Glu Gln Gly Gly Val Phe Ala Ala Glu Gly Tyr Ala Arg Ser Ser Gly
130 135 140
Lys Pro Gly Ile Cys Ile Ala Thr Ser Gly Pro Gly Ala Thr Asn Leu
145 150 155 160
Val Ser Gly Leu Ala Asp Ala Met Leu Asp Ser Val Pro Leu Val Ala
165 170 175
Ile Thr Gly Gln Val Leu Arg Arg Met Ile Gly Thr Asp Ala Phe Gln
180 185 190
Glu Thr Pro Ile Val Glu Val Thr Arg Ser Ile Thr Lys His Asn Tyr
195 200 205
Leu Val Met Asp Val Asp Asp Ile Pro Arg Ile Val Gln Glu Ala Phe
210 215 220
Phe Leu Ala Thr Ser Gly Arg Pro Gly Pro Val Leu Val Asp Val Pro
225 230 235 240
Lys Asp Ile Gln Gln Gln Leu Ala Ile Pro Asn Trp Asp Gln Pro Met
245 250 255
Arg Leu Pro Gly Tyr Met Ser Arg Leu Pro Gln Pro Pro Glu Val Ser
260 265 270
Gln Leu Gly Gln Ile Val Arg Leu Ile Ser Glu Ser Lys Arg Pro Val
275 280 285
Leu Tyr Val Gly Gly Gly Ser Leu Asn Ser Ser Glu Glu Leu Gly Arg
290 295 300
Phe Val Glu Leu Thr Gly Ile Pro Val Ala Ser Thr Leu Met Gly Leu
305 310 315 320
Gly Ser Tyr Pro Cys Asn Asp Glu Leu Ser Leu Gln Met Leu Gly Met
325 330 335
His Gly Thr Val Tyr Ala Asn Tyr Ala Val Glu His Ser Asp Leu Leu
340 345 350
Leu Ala Phe Gly Val Arg Phe Asp Asp Arg Val Thr Gly Lys Leu Glu
355 360 365
Ala Phe Ala Ser Arg Ala Lys Ile Val His Ile Asp Ile Asp Ser Ala
370 375 380
Glu Ile Gly Lys Asn Lys Thr Pro His Val Ser Val Cys Gly Asp Val
385 390 395 400
Lys Leu Ala Leu Gln Gly Met Asn Lys Val Leu Glu Asn Arg Ala Glu
405 410 415
Glu Leu Lys Leu Asp Phe Gly Val Trp Arg Ser Glu Leu Ser Glu Gln
420 425 430
Lys Gln Lys Phe Pro Leu Ser Phe Lys Thr Phe Gly Glu Ala Ile Pro
435 440 445
Pro Gln Tyr Ala Ile Gln Ile Leu Asp Glu Leu Thr Glu Gly Lys Ala
450 455 460
Ile Ile Ser Thr Gly Val Gly Gln His Gln Met Trp Ala Ala Gln Phe
465 470 475 480
Tyr Lys Tyr Arg Lys Pro Arg Gln Trp Leu Ser Ser Ser Gly Leu Gly
485 490 495
Ala Met Gly Phe Gly Leu Pro Ala Ala Ile Gly Ala Ser Val Ala Asn
500 505 510
Pro Asp Ala Ile Val Val Asp Ile Asp Gly Asp Gly Ser Phe Ile Met
515 520 525
Asn Val Gln Glu Leu Ala Thr Ile Arg Val Glu Asn Leu Pro Val Lys
530 535 540
Ile Leu Leu Leu Asn Asn Gln His Leu Gly Met Val Met Gln Trp Glu
545 550 555 560
Asp Arg Phe Tyr Lys Ala Asn Arg Ala His Thr Tyr Leu Gly Asp Pro
565 570 575
Ala Arg Glu Asn Glu Ile Phe Pro Asn Met Leu Gln Phe Ala Gly Ala
580 585 590
Cys Gly Ile Pro Ala Ala Arg Val Thr Lys Lys Glu Glu Leu Arg Glu
595 600 605
Ala Ile Gln Thr Met Leu Asp Thr Pro Gly Pro Tyr Leu Leu Asp Val
610 615 620
Ile Cys Pro His Gln Glu His Val Leu Pro Met Ile Pro Ser Gly Gly
625 630 635 640
Thr Phe Lys Asp Val Ile Thr Glu Gly Asp Gly Arg Thr Lys Tyr
645 650 655
<210> 3
<211> 1959
<212> DNA
<213> ALS3 mutant Gene (ALS 3)
<400> 3
atggcggcgg caacatcgtc ttctccgatc tccttaaccg ctaaaccttc ttccaaatcc 60
cctctaccca tttccagatt ctcccttccc ttctccttaa ccccacagaa accctcctcc 120
cgtctccacc gtccactcgc catctccgcc gttctcaact cacccgtcaa tgtcgcacct 180
gaaaaaaccg acaagatcaa gactttcatc tcccgctacg ctcccgacga gccccgcaag 240
ggtgctgata tcctcgtgga agccctcgag cgtcaaggcg tcgaaaccgt cttcgcttat 300
cccggaggtg cctccatgga gatccaccaa gccttgactc gctcctccac catccgtaac 360
gtcctccccc gtcacgaaca aggaggagtc ttcgccgccg agggttacgc tcgttcctcc 420
ggcaaaccgg gaatctgcat agccacttcg ggtcccggag ctaccaacct cgtcagcggg 480
ttagccgacg cgatgcttga cagtgttcct ctcgtcgcca tcacaggaca ggtccctcgc 540
cggatgatcg gtactgacgc gttccaagag acgccaatcg ttgaggtaac gaggtctatt 600
acgaaacata actatctggt gatggatgtt gatgacatac ctaggatcgt tcaagaagca 660
ttctttctag ctacttccgg tagacccgga ccggttttgg ttgatgttcc taaggatatt 720
cagcagcagc ttgcgattcc taactgggat caacctatgc gcttgcctgg ctacatgtct 780
aggctgcctc agccaccgga agtttctcag ttaggccaga tcgttaggtt gatctcggag 840
tctaagaggc ctgttttgta cgttggtggt ggaagcttga actcgagtga agaactgggg 900
agatttgtcg agcttactgg gatccctgtt gcgagtacgt tgatggggct tggctcttat 960
ccttgtaacg atgagttgtc cctgcagatg cttggcatgc acgggactgt gtatgctaac 1020
tacgctgtgg agcatagtga tttgttgctg gcgtttggtg ttaggtttga tgaccgtgtc 1080
acgggaaagc tcgaggcgtt tgcgagcagg gctaagattg tgcacataga cattgattct 1140
gctgagattg ggaagaataa gacacctcac gtgtctgtgt gtggtgatgt aaagctggct 1200
ttgcaaggga tgaacaaggt tcttgagaac cgggcggagg agctcaagct tgatttcggt 1260
gtttggagga gtgagttgag cgagcagaaa cagaagttcc cgttgagctt caaaacgttt 1320
ggagaagcca ttcctccgca gtacgcgatt caggtcctag acgagctaac ccaagggaag 1380
gcaattatca gtactggtgt tggacagcat cagatgtggg cggcgcagtt ttacaagtac 1440
aggaagccga ggcagtggct gtcgtcctca ggactcggag ctatgggttt cggacttcct 1500
gctgcgattg gagcgtctgt ggcgaaccct gatgcgattg ttgtggacat tgacggtgat 1560
ggaagcttca taatgaacgt tcaagagctg gccacaatcc gtgtagagaa tcttcctgtg 1620
aagatactct tgttaaacaa ccagcatctt gggatggtca tgcaattgga agatcggttc 1680
tacaaagcta acagagctca cacttatctc ggggacccgg caagggagaa cgagatcttc 1740
cctaacatgc tgcagtttgc aggagcttgc gggattccag ctgcgagagt gacgaagaaa 1800
gaagaactcc gagaagctat tcagacaatg ctggatacac ctggaccgta cctgttggat 1860
gtcatctgtc cgcaccaaga acatgtgtta ccgatgatcc caagtggtgg cactttcaaa 1920
gatgtaataa ccgaagggga tggtcgcact aagtactga 1959
<210> 4
<211> 652
<212> PRT
<213> ALS3 mutant Gene (ALS 3)
<400> 4
Met Ala Ala Ala Thr Ser Ser Ser Pro Ile Ser Leu Thr Ala Lys Pro
1 5 10 15
Ser Ser Lys Ser Pro Leu Pro Ile Ser Arg Phe Ser Leu Pro Phe Ser
20 25 30
Leu Thr Pro Gln Lys Pro Ser Ser Arg Leu His Arg Pro Leu Ala Ile
35 40 45
Ser Ala Val Leu Asn Ser Pro Val Asn Val Ala Pro Glu Lys Thr Asp
50 55 60
Lys Ile Lys Thr Phe Ile Ser Arg Tyr Ala Pro Asp Glu Pro Arg Lys
65 70 75 80
Gly Ala Asp Ile Leu Val Glu Ala Leu Glu Arg Gln Gly Val Glu Thr
85 90 95
Val Phe Ala Tyr Pro Gly Gly Ala Ser Met Glu Ile His Gln Ala Leu
100 105 110
Thr Arg Ser Ser Thr Ile Arg Asn Val Leu Pro Arg His Glu Gln Gly
115 120 125
Gly Val Phe Ala Ala Glu Gly Tyr Ala Arg Ser Ser Gly Lys Pro Gly
130 135 140
Ile Cys Ile Ala Thr Ser Gly Pro Gly Ala Thr Asn Leu Val Ser Gly
145 150 155 160
Leu Ala Asp Ala Met Leu Asp Ser Val Pro Leu Val Ala Ile Thr Gly
165 170 175
Gln Val Pro Arg Arg Met Ile Gly Thr Asp Ala Phe Gln Glu Thr Pro
180 185 190
Ile Val Glu Val Thr Arg Ser Ile Thr Lys His Asn Tyr Leu Val Met
195 200 205
Asp Val Asp Asp Ile Pro Arg Ile Val Gln Glu Ala Phe Phe Leu Ala
210 215 220
Thr Ser Gly Arg Pro Gly Pro Val Leu Val Asp Val Pro Lys Asp Ile
225 230 235 240
Gln Gln Gln Leu Ala Ile Pro Asn Trp Asp Gln Pro Met Arg Leu Pro
245 250 255
Gly Tyr Met Ser Arg Leu Pro Gln Pro Pro Glu Val Ser Gln Leu Gly
260 265 270
Gln Ile Val Arg Leu Ile Ser Glu Ser Lys Arg Pro Val Leu Tyr Val
275 280 285
Gly Gly Gly Ser Leu Asn Ser Ser Glu Glu Leu Gly Arg Phe Val Glu
290 295 300
Leu Thr Gly Ile Pro Val Ala Ser Thr Leu Met Gly Leu Gly Ser Tyr
305 310 315 320
Pro Cys Asn Asp Glu Leu Ser Leu Gln Met Leu Gly Met His Gly Thr
325 330 335
Val Tyr Ala Asn Tyr Ala Val Glu His Ser Asp Leu Leu Leu Ala Phe
340 345 350
Gly Val Arg Phe Asp Asp Arg Val Thr Gly Lys Leu Glu Ala Phe Ala
355 360 365
Ser Arg Ala Lys Ile Val His Ile Asp Ile Asp Ser Ala Glu Ile Gly
370 375 380
Lys Asn Lys Thr Pro His Val Ser Val Cys Gly Asp Val Lys Leu Ala
385 390 395 400
Leu Gln Gly Met Asn Lys Val Leu Glu Asn Arg Ala Glu Glu Leu Lys
405 410 415
Leu Asp Phe Gly Val Trp Arg Ser Glu Leu Ser Glu Gln Lys Gln Lys
420 425 430
Phe Pro Leu Ser Phe Lys Thr Phe Gly Glu Ala Ile Pro Pro Gln Tyr
435 440 445
Ala Ile Gln Val Leu Asp Glu Leu Thr Gln Gly Lys Ala Ile Ile Ser
450 455 460
Thr Gly Val Gly Gln His Gln Met Trp Ala Ala Gln Phe Tyr Lys Tyr
465 470 475 480
Arg Lys Pro Arg Gln Trp Leu Ser Ser Ser Gly Leu Gly Ala Met Gly
485 490 495
Phe Gly Leu Pro Ala Ala Ile Gly Ala Ser Val Ala Asn Pro Asp Ala
500 505 510
Ile Val Val Asp Ile Asp Gly Asp Gly Ser Phe Ile Met Asn Val Gln
515 520 525
Glu Leu Ala Thr Ile Arg Val Glu Asn Leu Pro Val Lys Ile Leu Leu
530 535 540
Leu Asn Asn Gln His Leu Gly Met Val Met Gln Leu Glu Asp Arg Phe
545 550 555 560
Tyr Lys Ala Asn Arg Ala His Thr Tyr Leu Gly Asp Pro Ala Arg Glu
565 570 575
Asn Glu Ile Phe Pro Asn Met Leu Gln Phe Ala Gly Ala Cys Gly Ile
580 585 590
Pro Ala Ala Arg Val Thr Lys Lys Glu Glu Leu Arg Glu Ala Ile Gln
595 600 605
Thr Met Leu Asp Thr Pro Gly Pro Tyr Leu Leu Asp Val Ile Cys Pro
610 615 620
His Gln Glu His Val Leu Pro Met Ile Pro Ser Gly Gly Thr Phe Lys
625 630 635 640
Asp Val Ile Thr Glu Gly Asp Gly Arg Thr Lys Tyr
645 650
<210> 5
<211> 20
<212> DNA
<213> BnALS1 primer 1 (Artificial Sequence)
<400> 5
gtggatctaa ctgttcttga 20
<210> 6
<211> 19
<212> DNA
<213> BnALS1 primer 2 (Artificial Sequence)
<400> 6
agagatgaag ctggtgatc 19
<210> 7
<211> 21
<212> DNA
<213> BnALS2 primer 1 (Artificial Sequence)
<400> 7
gagtgttgcg agaaattgct t 21
<210> 8
<211> 24
<212> DNA
<213> BnALS2 primer 2 (Artificial Sequence)
<400> 8
ttgattattc tatgctctct tctg 24
<210> 9
<211> 23
<212> DNA
<213> BnALS3 primer 1 (Artificial Sequence)
<400> 9
atggttagat gagagagaga gag 23
<210> 10
<211> 21
<212> DNA
<213> BnALS3 primer 2 (Artificial Sequence)
<400> 10
ggtcgcacta agtactgaga g 21
<210> 11
<211> 30
<212> DNA
<213> BnALS1 primer 3 (Artificial Sequence)
<400> 11
cgcggtacct catctctctc tcctctaacc 30
<210> 12
<211> 29
<212> DNA
<213> BnALS1 primer 4 (Artificial Sequence)
<400> 12
cgcactagtg atcaccagct tcatctctc 29
<210> 13
<211> 32
<212> DNA
<213> BnALS3 primer 3 (Artificial Sequence)
<400> 13
cgcggtaccc tctctctctc tcatctaacc at 32
<210> 14
<211> 30
<212> DNA
<213> BnALS3 primer 4 (Artificial Sequence)
<400> 14
cgcactagtc tctcagtact tagtgcgacc 30

Claims (3)

1. A method for obtaining a plant with herbicide resistance, comprising the steps of:
1) Allowing the plant to comprise the nucleic acid; or
2) Allowing the plant to express the ALS mutein;
the nucleic acid encodes the ALS mutant protein, the ALS mutant protein consists of ALS1 and ALS3, and the ALS1 amino acid sequence is shown as SEQ ID NO: 2. the ALS3 amino acid sequence is shown as SEQ ID NO: 4. the nucleic acid, the ALS1 nucleotide sequence of which is shown in SEQ ID NO:1, and the ALS3 nucleotide sequence is shown as SEQ ID NO:3 is shown in the specification; the plant is rape or arabidopsis thaliana; the herbicide is tribenuron-methyl or mesosulfuron-methyl.
2. The method according to claim 1, characterized in that it comprises a step of transgenesis, crossing, backcrossing or asexual propagation.
3. Method for identifying resistant plants, wherein the plants are obtained by the method according to any one of claims 1 to 2, comprising the steps of:
1) Determining whether the plant comprises a nucleic acid; or the like, or, alternatively,
2) Determining whether said plant expresses said ALS mutein;
the nucleic acid encodes the ALS mutant protein, the ALS mutant protein consists of ALS1 and ALS3, and the ALS1 amino acid sequence is shown as SEQ ID NO: 2. the ALS3 amino acid sequence is shown as SEQ ID NO: 4. the ALS1 nucleotide sequence of the nucleic acid is shown as SEQ ID NO:1, and the ALS3 nucleotide sequence is shown as SEQ ID NO:3 is shown in the specification; the plant is rape or arabidopsis; the herbicide is tribenuron-methyl or mesosulfuron-methyl.
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CN108707592B (en) * 2018-05-23 2022-06-28 北京市农林科学院 CLALS protein, encoding gene thereof and application of CLALS protein and encoding gene thereof in prediction of herbicide resistance of watermelons
CN111373035B (en) * 2018-08-24 2023-03-28 江苏省农业科学院 Rape triazole-resistant pyrimidine sulfonamide herbicide gene and application thereof
CN112154207B (en) * 2018-08-24 2022-03-22 江苏省农业科学院 Rape anti-pyrimidine salicylic acid herbicide gene and application thereof
CN109880928A (en) * 2019-03-20 2019-06-14 江苏省农业科学院 Detect SNP mutation occurs for rape als gene labeled primer, detection kit and its application
CN110117599A (en) * 2019-04-15 2019-08-13 上海市农业科学院 Brassica Napus sulfonylurea herbicide mutated gene and application
CN110157828A (en) * 2019-04-15 2019-08-23 上海市农业科学院 The application of Brassica Napus sulfonylurea herbicide resistant mutants and its method
CN110628783A (en) * 2019-10-23 2019-12-31 江苏省农业科学院 Non-transgenic herbicide-resistant rape gene and application thereof
CN110679480A (en) * 2019-11-22 2020-01-14 江苏省农业科学院 Breeding method of high-resistance sulfonylurea herbicide rape

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