CN110484524B - 阿拉伯呋喃糖苷酶BoAra43A及其编码基因和应用 - Google Patents

阿拉伯呋喃糖苷酶BoAra43A及其编码基因和应用 Download PDF

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CN110484524B
CN110484524B CN201910820907.5A CN201910820907A CN110484524B CN 110484524 B CN110484524 B CN 110484524B CN 201910820907 A CN201910820907 A CN 201910820907A CN 110484524 B CN110484524 B CN 110484524B
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arabinofuranosidase
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姚斌
苏小运
邢亚欣
罗会颖
黄火清
王苑
柏映国
涂涛
王亚茹
张�杰
师霞
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Abstract

本发明属于农业生物技术领域,具体涉及阿拉伯呋喃糖苷酶BoAra43A及其编码和应用。发明提供了一种来源于稻平脐蠕孢的阿拉伯呋喃糖苷酶BoAra43A,其氨基酸序列如SEQ ID NO.1或SEQ ID NO.3所示。本发明的阿拉伯呋喃糖苷酶能有效的降解不同结构类型的木聚糖尤其是玉米糠来源的木聚糖,可作为一种新型的酶制剂,广泛用于食品和饲料领域。

Description

阿拉伯呋喃糖苷酶BoAra43A及其编码基因和应用
技术领域
本发明属于农业生物技术领域,具体涉及阿拉伯呋喃糖苷酶BoAra43A及其编码基因和应用。
背景技术
农业生产过程中会产生大量废弃物,如农作物收获时残留在农田内的农作物秸秆(包括玉米秸、高粱秸、稻草和小麦秸秆等)以及在农作物加工过程中产生的废弃物,比如米糠、麦麸和玉米糠(玉米皮)等,都属于可再生的生物质资源。然而由于植物纤维结构的复杂性,使用糖苷水解酶来降解其中的生物质多糖效率不高,例如,在生产生物燃料和生物基化学品时纤维素酶的成本是产品的主要成本,而在养殖领域,由于玉米皮中多糖的复杂侧链结构,很少有酶能有效的将其降解,因此阻碍了玉米中营养成分的释放。
木聚糖是植物细胞壁的重要组成成分,作为最常见的半纤维素,它连接细胞壁中的木质素和纤维素,是人类谷物来源食物的常见成分。木聚糖是自然界中除纤维素外第二丰富的可再生生物质多糖,并广泛存在于硬木、软木和草本类植物中。木聚糖的主链由木糖单元经β-1,4-糖苷键连接而成,其支链结构由于来源的不同而有所差异。异质性木聚糖侧链的存在限制了β-1,4-内切木聚糖酶和β-木糖苷酶与木聚糖的结合,从而降低了木聚糖的可降解性。侧链的组成成分主要包括阿拉伯糖、乙酸、阿魏酸和4-甲基葡萄糖醛酸等。因此对于异质性木聚糖、尤其是如玉米糠类侧链结构极为复杂的异质性木聚糖,侧链必须首先被相应的阿拉伯呋喃糖苷酶、乙酰酯酶、阿魏酸酯酶和α-葡萄糖醛酸酶降解,才能使木聚糖主链发生有效的降解。木聚糖完全降解成单糖组分,需要不同酶混合使用,这包括内切-1,4-β-木聚糖酶(EC3.2.1.8)、β-D-木糖苷酶(EC3.2.1.37)、α-L-阿拉伯呋喃糖苷酶(EC3.2.1.55)、α-葡糖醛酸糖苷酶(EC 3.2.1.139)、乙酰木聚糖酯酶(EC 3.1.1.72)和阿魏酸酯酶(EC 3.1.1.73)。
阿拉伯呋喃糖苷酶在木聚糖酶法解聚中的功能是从异质性阿拉伯葡萄糖醛酸木聚糖的木糖主链去除阿拉伯糖侧链。阿拉伯呋喃糖苷酶主要存在于四个不同的家族(GH43、GH51、GH54和GH62),它们使用反转(GH 43)或保留(GH 51、GH54)的机制来水解阿拉伯呋喃糖苷键。其中GH43家族的阿拉伯呋喃糖苷酶最为常见,此家族的成员具有不同的底物特异性。根据底物特异性,阿拉伯呋喃糖苷酶可分为三大类:(i)A型酶:仅对短链阿拉伯寡糖和pNP-α-L-阿拉伯呋喃糖苷有活性(PITSON1996);(ii)B型酶:底物特异性更广,能降解短寡糖和长多糖(如阿拉伯木聚糖和阿拉伯聚糖);(iii)C型酶:主要对阿拉伯木聚糖有活性。
由于阿拉伯糖侧链和木聚糖主链连接方式的不同,即使对于降解阿拉伯木聚糖寡糖的阿拉伯呋喃糖苷酶,还可以进一步依据它们是否仅从单取代的木糖残基(Ara-m)或仅从双取代的木糖残基(Ara-d)中释放α-L-阿拉伯糖来区分它们。例如,Ara-m是最常见的阿拉伯呋喃糖苷酶,它们只降解单取代的阿拉伯呋喃糖苷键,在所有GH家族中均能找到;从双取代的木糖主链切割α-(1→3)-连接的阿拉伯呋喃糖的酶则可被命名为Ara-d3,表明该酶可对于双取代底物切割的特异性。同Ara-m阿拉伯呋喃糖苷酶相比,Ara-d型阿拉伯呋喃糖苷酶发现的非常少。玉米糠是一种异质性木聚糖,并含有丰富的2,3-双取代阿拉伯糖侧链,而其有效的阿拉伯呋喃糖苷酶却较少发现。
发明内容
本发明的目的在于提供一种阿拉伯呋喃糖苷酶BoAra43A。
本发明的再一目的在于提供上述阿拉伯呋喃糖苷酶BoAra43A的编码基因。
本发明的再一目的在于提供含有上述编码基因的重组表达载体。
本发明的再一目的在于提供含有上述编码基因的重组菌株。
本发明的再一目的在于提供上述阿拉伯呋喃糖苷酶BoAra43A的制备方法。
本发明的再一目的在于提供上述阿拉伯呋喃糖苷酶BoAra43A的应用。
本发明的野生型的阿拉伯呋喃糖苷酶BoAra43A,其氨基酸序列分别如SEQ IDNO.1所示:
MRVSTVSSLSLLLAGLSVAGPVSDKRALSSRATTFNNPVIYQDYPDLDVFRIGDVFYYSSSTFAFSPGAPVLKSYDLVNWTPVTHSVPRLNFGSPYDLPNPTTRSYVKGIWASSLRYRKSSDKFIWMGCVQSTGQTYIWTAPGQNAAANNGEVSSWNWTAAGSINKCYYDNGIFIDDDDTMYVVHGNPAVRVAQLNKDGTAEVKNQEVYRDPNGLTLEGSRMYKINGTYYIFSTKPADDEWVLKSKSPWGPFEARILVDSISGPLSNAGHAHQGGVVDTKDGKWYYVAFLDSYPAGRIPVVAPLTFDNNGWPSVVKVNNAWGASYPTPVTTSKTVPALTGIDKFTGTSLSAEWEWNHNPDTSKFSLLGGAGGLKLSTATVTNDLYGARNTLTHRIIGPKSSGTFRLDISQMASGDRAGAVLFRDTAAYIGIHKSGSTASLVMVNGLELNADRTTKSTGTVVATGPAIPAGSTDLYLRIQADITPAFGTNTLRQATFWYSTDGTSYKQLGPSFGLANTWQFFTGFRYGVFNFATSAVGGSVTVKSFEMQKI*其中,该酶基因编码550个氨基酸,N端19个氨基酸为其信号肽序列,信号肽的序列如SEQ ID NO.2所示:
MRVSTVSSLSLLLAGLSVA
因此,成熟的阿拉伯呋喃糖苷酶BoAra43A的理论分子量为57.8kDa,其氨基酸序列如SEQ ID NO.3所示:
GPVSDKRALSSRATTFNNPVIYQDYPDLDVFRIGDVFYYSSSTFAFSPGAPVLKSYDLVNWTPVTHSVPRLNFGSPYDLPNPTTRSYVKGIWASSLRYRKSSDKFIWMGCVQSTGQTYIWTAPGQNAAANNGEVSSWNWTAAGSINKCYYDNGIFIDDDDTMYVVHGNPAVRVAQLNKDGTAEVKNQEVYRDPNGLTLEGSRMYKINGTYYIFSTKPADDEWVLKSKSPWGPFEARILVDSISGPLSNAGHAHQGGVVDTKDGKWYYVAFLDSYPAGRIPVVAPLTFDNNGWPSVVKVNNAWGASYPTPVTTSKTVPALTGIDKFTGTSLSAEWEWNHNPDTSKFSLLGGAGGLKLSTATVTNDLYGARNTLTHRIIGPKSSGTFRLDISQMASGDRAGAVLFRDTAAYIGIHKSGSTASLVMVNGLELNADRTTKSTGTVVATGPAIPAGSTDLYLRIQADITPAFGTNTLRQATFWYSTDGTSYKQLGPSFGLANTWQFFTGFRYGVFNFATSAVGGSVTVKSFEMQKI*
本发明还提供了编码上述阿拉伯呋喃糖苷酶BoAra43A的基因序列,其基因组序列如SEQ ID NO.4所示:
ATGCGCGTTTCTACTGTTTCTTCATTGTCGTTGCTCTTGGCGGGCTTGTCCGTTGCAGGACCCGTATCGGACAAGCGTGCGCTGTCGAGCCGCGCCACGACGTTTAACAACCCTGTTATATACCAAGACTATCCTGATCTTGACGTTTTCAGGATCGGAGATGTGTTCTATTACTCTTCATCGACCTTTGCGTTTAGTCCAGGAGCTCCCGTGCTCAAGTCGTACGACCTGGTGAACTGGACGCCCGTCACTCACAGTGTACCAAGACTGAACTTCGGCTCTCCATATGACCTGCCAAACCCGACTACCCGGTCTTATGTCAAGGGTATCTGGGCGAGTTCGTTGCGGTACCGTAAGTCGAGCGACAAGTTCATTTGGATGGGCTGTGTTCAATCGACGGGCCAGACATATATCTGGACAGCCCCCGGTCAAAACGCCGCTGCCAACAACGGCGAGGTATCGAGCTGGAACTGGACTGCTGCGGGTAGCATTAACAAATGCTACTACGACAACGGCATCTTCATCGATGACGACGACACCATGTATGTCGTGCACGGCAACCCTGCCGTTCGAGTTGCCCAACTCAACAAAGACGGCACAGCCGAAGTGAAGAACCAAGAGGTATACCGCGATCCTAACGGCCTCACTCTCGAGGGATCCCGCATGTACAAGATCAACGGCACCTACTACATCTTCTCGACCAAGCCCGCCGACGACGAATGGGTCCTGAAATCCAAGAGCCCCTGGGGTCCCTTCGAAGCCCGCATCCTCGTCGACAGCATCTCCGGCCCCCTCTCCAACGCCGGCCACGCCCACCAAGGCGGTGTCGTCGACACCAAAGACGGAAAATGGTACTACGTCGCCTTCCTCGACTCGTACCCCGCGGGCCGCATCCCCGTCGTCGCACCTCTCACCTTTGACAACAACGGCTGGCCTTCAGTCGTCAAGGTGAACAACGCCTGGGGTGCCTCCTACCCAACCCCCGTAACCACCAGCAAGACCGTCCCCGCACTCACTGGCATCGACAAATTCACCGGCACCTCACTCAGCGCAGAATGGGAATGGAACCATAACCCCGACACCTCCAAGTTCAGCCTCCTCGGCGGCGCAGGCGGTCTCAAACTCTCCACCGCAACCGTAACCAACGACCTCTACGGCGCCCGCAACACCCTCACCCACCGCATCATCGGCCCCAAGTCCTCCGGTACCTTCCGCCTCGACATCAGTCAAATGGCCTCCGGCGACCGCGCAGGCGCCGTCCTCTTCCGCGACACAGCCGCCTACATCGGCATCCACAAATCCGGCTCTACCGCCTCCCTCGTCATGGTCAACGGCCTCGAACTCAACGCCGACCGCACCACCAAATCCACCGGCACGGTGGTCGCTACAGGCCCGGCCATTCCCGCGGGCTCGACGGATTTGTACCTCAGGATCCAGGCGGATATCACACCCGCATTTGGAACAAACACCCTGCGCCAGGCGACGTTTTGGTACAGCACTGATGGCACATCGTACAAGCAGCTGGGACCGTCGTTTGGGCTCGCGAATACCTGGCAGTTTTTCACCGGGTTCAGGTATGGTGTTTTCAACTTTGCGACCAGTGCGGTGGGTGGCAGTGTTACGGTGAAGAGTTTTGAGATGCAGAAGATTTAA阿拉伯呋喃糖苷酶BoAra43A编码基因序列全长1653bp。其中,信号肽的碱基序列如SEQ ID NO.5所示:
ATGCGCGTTTCTACTGTTTCTTCATTGTCGTTGCTCTTGGCGGGCTTGTCCGTTGCA
成熟的阿拉伯呋喃糖苷酶BoAra43A的核酸(去信号肽)序列如SEQ ID NO.6所示:
GGACCCGTATCGGACAAGCGTGCGCTGTCGAGCCGCGCCACGACGTTTAACAACCCTGTTATATACCAAGACTATCCTGATCTTGACGTTTTCAGGATCGGAGATGTGTTCTATTACTCTTCATCGACCTTTGCGTTTAGTCCAGGAGCTCCCGTGCTCAAGTCGTACGACCTGGTGAACTGGACGCCCGTCACTCACAGTGTACCAAGACTGAACTTCGGCTCTCCATATGACCTGCCAAACCCGACTACCCGGTCTTATGTCAAGGGTATCTGGGCGAGTTCGTTGCGGTACCGTAAGTCGAGCGACAAGTTCATTTGGATGGGCTGTGTTCAATCGACGGGCCAGACATATATCTGGACAGCCCCCGGTCAAAACGCCGCTGCCAACAACGGCGAGGTATCGAGCTGGAACTGGACTGCTGCGGGTAGCATTAACAAATGCTACTACGACAACGGCATCTTCATCGATGACGACGACACCATGTATGTCGTGCACGGCAACCCTGCCGTTCGAGTTGCCCAACTCAACAAAGACGGCACAGCCGAAGTGAAGAACCAAGAGGTATACCGCGATCCTAACGGCCTCACTCTCGAGGGATCCCGCATGTACAAGATCAACGGCACCTACTACATCTTCTCGACCAAGCCCGCCGACGACGAATGGGTCCTGAAATCCAAGAGCCCCTGGGGTCCCTTCGAAGCCCGCATCCTCGTCGACAGCATCTCCGGCCCCCTCTCCAACGCCGGCCACGCCCACCAAGGCGGTGTCGTCGACACCAAAGACGGAAAATGGTACTACGTCGCCTTCCTCGACTCGTACCCCGCGGGCCGCATCCCCGTCGTCGCACCTCTCACCTTTGACAACAACGGCTGGCCTTCAGTCGTCAAGGTGAACAACGCCTGGGGTGCCTCCTACCCAACCCCCGTAACCACCAGCAAGACCGTCCCCGCACTCACTGGCATCGACAAATTCACCGGCACCTCACTCAGCGCAGAATGGGAATGGAACCATAACCCCGACACCTCCAAGTTCAGCCTCCTCGGCGGCGCAGGCGGTCTCAAACTCTCCACCGCAACCGTAACCAACGACCTCTACGGCGCCCGCAACACCCTCACCCACCGCATCATCGGCCCCAAGTCCTCCGGTACCTTCCGCCTCGACATCAGTCAAATGGCCTCCGGCGACCGCGCAGGCGCCGTCCTCTTCCGCGACACAGCCGCCTACATCGGCATCCACAAATCCGGCTCTACCGCCTCCCTCGTCATGGTCAACGGCCTCGAACTCAACGCCGACCGCACCACCAAATCCACCGGCACGGTGGTCGCTACAGGCCCGGCCATTCCCGCGGGCTCGACGGATTTGTACCTCAGGATCCAGGCGGATATCACACCCGCATTTGGAACAAACACCCTGCGCCAGGCGACGTTTTGGTACAGCACTGATGGCACATCGTACAAGCAGCTGGGACCGTCGTTTGGGCTCGCGAATACCTGGCAGTTTTTCACCGGGTTCAGGTATGGTGTTTTCAACTTTGCGACCAGTGCGGTGGGTGGCAGTGTTACGGTGAAGAGTTTTGAGATGCAGAAGATTTAA
本发明还提供了包含上述阿拉伯呋喃糖苷酶BoAra43A基因的重组载体,优选为pPIC9γ-BoAra43A。将本发明的阿拉伯呋喃糖苷酶基因插入到表达载体合适的限制性酶切位点之间,使其核苷酸序列可操作的与表达调控序列相连接。作为本发明的一个最优选的实施方案,将本发明的阿拉伯呋喃糖苷酶BoAra43A插入到质粒pPIC9γ上的EcoRI-NotI限制性酶切位点之间,使该核苷酸序列位于AOX启动子的下游并受其调控,得到重组毕赤酵母表达质粒pPIC9γ-BoAra43A。
本发明还提供了包含上述阿拉伯呋喃糖苷酶BoAra43A基因的重组菌株,优选为重组毕赤酵母菌株GS115/BoAra43A。
本发明还提供了一种制备阿拉伯呋喃糖苷酶BoAra43A的方法,包括以下步骤:
(1)用上述的重组载体转化宿主细胞,得重组菌株;
(2)培养重组菌株,诱导重组阿拉伯呋喃糖苷酶的表达;
(3)纯化阿拉伯呋喃糖苷酶BoAra43A。
本发明提供了上述阿拉伯呋喃糖苷酶BoAra43A的应用,尤其是在降解玉米糠木聚糖方面,其对水溶性小麦阿拉伯木聚糖、玉米糠碱提物具有良好的降解率。
本发明的阿拉伯呋喃糖苷酶BoAra43A能有效的降解不同结构类型的木聚糖,尤其是玉米糠来源的木聚糖,例如小麦阿拉伯木聚糖、玉米糠、玉米糠碱提物等,具有较好的底物特异性。BoAra43A的最适温度为50℃,最适pH为5.0,该酶在40℃和50℃温浴10min均可保持85%左右的酶活性,在pH 2.0-12.0的范围内37℃保温1h,BoAra43A均可以保持80%左右的酶活力。
附图说明
图1显示阿拉伯呋喃糖苷酶BoAra43A的酶学特性,其中,A为BoAra43A的最适温度;B为BoAra43A的最适pH;C为BoAra43A的热稳定性;D为BoAra43A的pH稳定性;
图2显示重组阿拉伯呋喃糖苷酶BoAra43A降解多糖的HPAEC-PAD分析结果;其中,A:阿拉伯糖;X1-X6:木糖-木六糖;CX:玉米糠;CX-NaOH:玉米糠木聚糖(碱提法);WAX:小麦阿拉伯木聚糖;箭头所指处为阿拉伯糖;
图3显示重组阿拉伯呋喃糖苷酶BoAra43A降解寡糖的HPAEC-PAD分析结果;其中,A:阿拉伯糖;X1-X6:木糖-木六糖;A2,3XX(23,33-di-α-L-阿拉伯呋喃糖基木三糖):23,33-di-α-L-arabinofuranosyl-xylotriose;XA2,3XX(23,33-di-α-L-阿拉伯呋喃糖基木四糖):23,33-di-α-L-arabinofuranosyl-xylotetraose;AAA2,3A/AAA3A(22,32-di-α-L-阿拉伯呋喃糖基-(1,5)-α-L-阿拉伯三糖与32-α-L-阿拉伯呋喃糖基-(1,5)-α-L-阿拉伯四糖):22,32-di-α-L-arabinofuranosyl-(1,5)-α-L-arabinotriose plus32-α-L-arabinofuranosyl-(1,5)-α-L-arabinotetraose。
具体实施方式
试验材料和试剂
1、基因及载体:毕赤酵母表达载体pPIC9γ及菌株GS115;
2、酶类及其它生化试剂:内切酶、重组酶、水溶性小麦阿拉伯木聚糖、玉米糠碱提物。
3、培养基:
(1)MD培养基:葡萄糖2%,琼脂糖2%,使用前加入10%YNB,1‰生物素;
(2)BMGY:酵母浸粉1%,蛋白胨2%,甘油2%,使用前加入10%YNB,1‰生物素;
(3)BMMY:酵母浸粉1%,蛋白胨2%,使用前加入10%YNB,1‰生物素,0.5%甲醇;
(4)YNB:13.4g YNB定容至100mL。
实施例1阿拉伯呋喃糖苷酶BoAra43A编码基因的克隆
本发明目的基因来源于稻平脐蠕孢(Bipolaris oryzae)。设计特异性引物:
pPIC9γ-BoAra43A-F1:
5'-AGAGGCTGAAGCTTACGTAGAATTCGGACCCGTATCGGACAAGCGTGCGC-3';
pPIC9γ-BoAra43A-R1:
5'-TCACCAGGTCGTACGACTTGAGCACGGGAGCTCCTGGACTAAACGCAAAG-3';
pPIC9γ-BoAra43A-F2:
5'-CTTTGCGTTTAGTCCAGGAGCTCCCGTGCTCAAGTCGTACGACCTGGTGA-3';
pPIC9γ-BoAra43A-R2:
5'-TTAATTCGCGGCCGCTTAAATCTTCTGCATCTC-3'。
以带有目的基因的质粒为模板进行PCR扩增。
将已去除内含子和编码信号肽的部分的BoAra43A目的片段与pPIC9γ载体用重组酶连接,转化Trans1-T1,通过PCR和测序筛选获得重组表达质粒pPIC9γ-BoAra43A。
以同样的方式对BoAra43A基因含信号肽完整蛋白的编码区构建重组表达载体。
在1.2%琼脂糖凝胶上电泳,切胶得到目的片段,将该片段回收后与EcoRI-NotI双酶切的pPIC9γ载体通过同源重组的方法相连,转化TransI克隆宿主,测序验证,得到阿拉伯呋喃糖苷酶BoAra43A编码基因。
实施例2重组阿拉伯呋喃糖苷酶BoAra43A的制备
将获得的含有阿拉伯呋喃糖苷酶BoAra43A重组大肠杆菌表达质粒pPIC9γ-BoAra43A转化毕赤酵母GS115,获得重组毕赤酵母菌株GS115/BoAra43A。
提取表达质粒用限制性内切酶BglⅡ线性化后电转入毕赤酵母GS115感受态细胞中,涂布于MD平板,30℃培养2d;待长出菌落后,挑取单克隆到3mL BMGY培养基中,30℃培养48h后4500r/min离心5min去上清,加入1.5mL BMMY培养基(0.5%V/V甲醇)进行诱导;诱导结束后,离心获得上清,测定阿拉伯呋喃糖苷酶酶活。将筛选获得的酶活最高的转化子进行摇瓶发酵培养,先在400mL BMGY中培养48h后,4500r/min离心5min去上清,然后用200mLBMMY培养基进行甲醇诱导(0.5%V/V甲醇),每24h补加0.5%V/V甲醇进行持续诱导,48h后离心收集上清,用于后续蛋白纯化和酶学性质测定。
重组蛋白的纯化:蛋白等电点pI=8.5,将酶液在pH=6.5缓冲液条件下进行透析,由于pI>pH,因此选用阳离子柱进行纯化,在相应的峰下收集BoAra43A蛋白。
实施例3阿拉伯呋喃糖苷酶BoAra43A的酶学特性
以10mg/mL的小麦阿拉伯木聚糖、玉米糠、玉米糠碱提物作为底物,在50℃、pH 5.0的条件下进行还原糖测定,发现BoAra43A对三种底物均可测得一定活性,其中对小麦阿拉伯木聚糖的活性最高。使用HPAEC-PAD分析,发现从三种底物中均只释放出阿拉伯糖为最终产物,证明BoAra43A为阿拉伯糖呋喃糖苷酶。以pNPA为底物,未检测到相关活性。
选择活性最高的小麦阿拉伯木聚糖为底物,测得BoAra43A的最适温度为50℃,在40℃仍有68%活性,在30℃有60%活性。当孵育温度从50℃升为60℃,酶活快速下降至25%,并缓慢下降至80℃的12%,如图1中A所示。
如图1中B所示,BoAra43A的最适pH为5.0,在pH 3.0时仍有20%活性,在pH 7.0时有50%活性,但在pH 2.0和9.0活性下降至几乎检测不到。
如图1中C所示,该酶在40℃和50℃温浴10min均可保持85%左右的酶活性,在60℃温浴10min则基本丧失酶活力。在40℃保温2h后,阿拉伯呋喃糖苷酶BoAra43A还可保持80%酶活性。但在50℃温浴30min只剩下20%左右的酶活性,温浴1h基本丧失酶活力。
如图1中D所示,在pH 2.0-12.0的范围内37℃保温1h,BoAra43A均可以保持80%左右的酶活力。
对小麦阿拉伯木聚糖,BoAra43A的比活为191.21U/mg,动力学常数Km和kcat分别是9.54mg/ml和1.043×10-3s-1
实施例4重组阿拉伯呋喃糖苷酶BoAra43A降解多糖
将水溶性阿拉伯木聚糖、玉米糠碱提物、玉米糠溶解到柠檬酸-磷酸二氢钠缓冲液(0.1M,pH 5.0)中。以未加入重组阿拉伯呋喃糖苷酶BoAra43A的体系作为对照,反应体系设3个重复。反应在50℃下进行,4h后煮沸失活。采用高效阴离子交换色谱(HPAEC-PAD)分析降解产物。离子色谱为赛默飞Chromeleon高效液相色谱分析系统,色谱分离柱为CarboPacTMPA100(4.0×250mm,8.5μm),流动相A(超纯水),流动相D(1M的NaOH);梯度洗脱条件0%A洗脱4分钟,0%-100%D洗脱16分钟,0%D洗脱6分钟。
结果如图2所示,三种多糖的侧链均可被降解生成阿拉伯糖,其中,X1-X6为标品,标品能够很好地确定具有特征量值的物质,X1-X6依次在对应时间段出峰,对比出峰时间可对样品中的物质构成进行定性分析。
实施例5重组阿拉伯呋喃糖苷酶BoAra43A降解寡糖
将寡糖A2,3XX、XA2,3XX和AAA2,3A/AAA3A溶解到柠檬酸-磷酸二氢钠缓冲液(0.1M,pH5.0)中。以未加入重组阿拉伯呋喃糖苷酶BoAra43A的体系作为对照,反应体系设3个重复。反应在50℃下进行,4h后煮沸失活。采用高效阴离子交换色谱(HPAEC-PAD)分析降解产物。离子色谱为赛默飞Chromeleon高效液相色谱分析系统,色谱分离柱为CarboPacTM PA100(4.0×250mm,8.5μm),流动相A(超纯水),流动相D(1M的NaOH);梯度洗脱条件0%A洗脱4分钟,0%-100%D洗脱16分钟,0%D洗脱6分钟。
结果如图3所示,三种寡糖的侧链均可被降解生成阿拉伯糖。
序列表
<110> 中国农业科学院饲料研究所
<120> 阿拉伯呋喃糖苷酶BoAra43A及其编码基因和应用
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gcgggtagca ttaacaaatg ctactacgac aacggcatct tcatcgatga cgacgacacc 540
atgtatgtcg tgcacggcaa ccctgccgtt cgagttgccc aactcaacaa agacggcaca 600
gccgaagtga agaaccaaga ggtataccgc gatcctaacg gcctcactct cgagggatcc 660
cgcatgtaca agatcaacgg cacctactac atcttctcga ccaagcccgc cgacgacgaa 720
tgggtcctga aatccaagag cccctggggt cccttcgaag cccgcatcct cgtcgacagc 780
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acctccaagt tcagcctcct cggcggcgca ggcggtctca aactctccac cgcaaccgta 1140
accaacgacc tctacggcgc ccgcaacacc ctcacccacc gcatcatcgg ccccaagtcc 1200
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ctcttccgcg acacagccgc ctacatcggc atccacaaat ccggctctac cgcctccctc 1320
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tcatcgacct ttgcgtttag tccaggagct cccgtgctca agtcgtacga cctggtgaac 180
tggacgcccg tcactcacag tgtaccaaga ctgaacttcg gctctccata tgacctgcca 240
aacccgacta cccggtctta tgtcaagggt atctgggcga gttcgttgcg gtaccgtaag 300
tcgagcgaca agttcatttg gatgggctgt gttcaatcga cgggccagac atatatctgg 360
acagcccccg gtcaaaacgc cgctgccaac aacggcgagg tatcgagctg gaactggact 420
gctgcgggta gcattaacaa atgctactac gacaacggca tcttcatcga tgacgacgac 480
accatgtatg tcgtgcacgg caaccctgcc gttcgagttg cccaactcaa caaagacggc 540
acagccgaag tgaagaacca agaggtatac cgcgatccta acggcctcac tctcgaggga 600
tcccgcatgt acaagatcaa cggcacctac tacatcttct cgaccaagcc cgccgacgac 660
gaatgggtcc tgaaatccaa gagcccctgg ggtcccttcg aagcccgcat cctcgtcgac 720
agcatctccg gccccctctc caacgccggc cacgcccacc aaggcggtgt cgtcgacacc 780
aaagacggaa aatggtacta cgtcgccttc ctcgactcgt accccgcggg ccgcatcccc 840
gtcgtcgcac ctctcacctt tgacaacaac ggctggcctt cagtcgtcaa ggtgaacaac 900
gcctggggtg cctcctaccc aacccccgta accaccagca agaccgtccc cgcactcact 960
ggcatcgaca aattcaccgg cacctcactc agcgcagaat gggaatggaa ccataacccc 1020
gacacctcca agttcagcct cctcggcggc gcaggcggtc tcaaactctc caccgcaacc 1080
gtaaccaacg acctctacgg cgcccgcaac accctcaccc accgcatcat cggccccaag 1140
tcctccggta ccttccgcct cgacatcagt caaatggcct ccggcgaccg cgcaggcgcc 1200
gtcctcttcc gcgacacagc cgcctacatc ggcatccaca aatccggctc taccgcctcc 1260
ctcgtcatgg tcaacggcct cgaactcaac gccgaccgca ccaccaaatc caccggcacg 1320
gtggtcgcta caggcccggc cattcccgcg ggctcgacgg atttgtacct caggatccag 1380
gcggatatca cacccgcatt tggaacaaac accctgcgcc aggcgacgtt ttggtacagc 1440
actgatggca catcgtacaa gcagctggga ccgtcgtttg ggctcgcgaa tacctggcag 1500
tttttcaccg ggttcaggta tggtgttttc aactttgcga ccagtgcggt gggtggcagt 1560
gttacggtga agagttttga gatgcagaag atttaa 1596

Claims (7)

1.阿拉伯呋喃糖苷酶BoAra43A,其特征在于,其氨基酸序列如SEQ ID No.1或SEQ IDNo.3所示。
2.阿拉伯呋喃糖苷酶BoAra43A基因,其特征在于,其编码权利要求1所述的阿拉伯呋喃糖苷酶BoAra43A。
3.根据权利要求2所述的阿拉伯呋喃糖苷酶BoAra43A基因,其特征在于,其核苷酸序列如SEQ ID No.4或SEQ ID No.6所示。
4.包含权利要求2所述的阿拉伯呋喃糖苷酶BoAra43A基因的重组表达载体。
5.包含权利要求2所述的阿拉伯呋喃糖苷酶BoAra43A基因的重组菌株。
6.制备权利要求1所述的阿拉伯呋喃糖苷酶BoAra43A的方法,其特征在于,所述方法包括以下步骤:
(1)用包含编码阿拉伯呋喃糖苷酶BoAra43A基因的重组表达载体转化宿主细胞,得到重组菌株;
(2)培养所述重组菌株,诱导阿拉伯呋喃糖苷酶BoAra43A表达;
(3)分离纯化所述阿拉伯呋喃糖苷酶BoAra43A。
7.权利要求1所述的阿拉伯呋喃糖苷酶BoAra43A在降解玉米糠木聚糖方面的应用。
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