CN109988765B - Targeting inhibitor of FENDRR gene and application thereof - Google Patents
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Abstract
The invention belongs to the technical field of biological medicines, and particularly relates to a targeted inhibitor of a FENDRR gene and application thereof. The invention provides a targeted inhibitor of FENDRR gene, the gene sequence of the targeted inhibitor is 5-.
Description
Technical Field
The invention belongs to the technical field of biological medicines, and particularly relates to a targeted inhibitor of a FENDRR gene and application thereof.
Background
Brain glioma is a primary intracranial tumor of high malignancy. Current conventional therapies include surgery, chemotherapy, and radiation therapy. Due to poor therapeutic efficacy, more and more researchers are working on developing new therapeutic drugs against molecular targets, including tumor markers, aberrant signaling pathways, epigenetic gene expression regulation, tumor angiogenesis inhibitors, and tumor immunotherapy, etc. In the application of the above therapeutic strategies, the presence of a Blood Tumor Barrier (BTB) between brain capillary endothelial cells and tumor cells greatly limits the therapeutic drugs from entering the tumor tissue, affecting the therapeutic efficacy. How to effectively increase the permeability of the blood tumor barrier and promote the therapeutic drugs to selectively enter the tumor tissues is a key problem to be solved urgently.
Long non-coding RNAs (lncrnas) are a class of non-coding RNA transcripts that are greater than 200 nucleotides in length. Research shows that LncRNA can regulate the generation and development of glioma. Research shows that FENDRR promotes the transfer of gastric cancer cells. The research reports that FENDRR is highly expressed in lung cancer tissues and gallbladder cancer tissues. The expression of FENDRR in the microvascular endothelium of glioma and the involvement in the regulation of the barrier permeability of hemangiomas have not been found. In the early stage, the expression level of FENDRR was detected by real-time PCR. The results show that the expression level of FENDRR in brain glioma microvascular endothelial cells is significantly higher than that of a normal control group, and the results suggest that FENDRR may be involved in the functional regulation and control of brain glioma microvascular endothelial cells.
The principle of RNA interference technology is the process of utilizing Dicer enzyme to cut RNA molecules, forming an RNA silencing complex, combining target RNA molecules in a targeted mode and further degrading the RNA molecules. The invention develops the inhibitor of the FENDRR gene by using an RNA interference technology, and plays a role in the field of glioma gene therapy.
At present, the mechanism related to the influence of FENDRR on glioma hematoma barrier is not reported, and the application of FENDRR in glioma gene therapy is still blank. Therefore, the development of a drug related to FENDRR is a problem to be solved urgently.
Disclosure of Invention
Experiments prove that the FENDRR gene is highly expressed in glioma tissues, and inhibition of the expression of FENDRR can open a hematoma barrier, increase the permeability of the hematoma barrier and improve the drug concentration in tumor tissues, so that the chemotherapy curative effect of brain glioma is improved.
The invention aims to design and provide a FENDRR gene targeted inhibitor and application thereof by utilizing an RNA interference technology, wherein the inhibitor can be specifically combined with a FENDRR gene to silence the FENDRR gene, so that the influence of the FENDRR gene on the permeability of a hematoma barrier is inhibited, the permeability of the hematoma barrier is increased by a safe and effective method, the drug concentration in a tumor tissue is increased, the chemotherapy curative effect of brain glioma is improved, the purpose of treating glioma is achieved, and a new thought and a new treatment method are provided for the gene therapy of glioma.
In order to achieve the above object, the present invention adopts the following technical solutions.
A targeted inhibitor of the FENDRR gene, the gene sequence of the targeted inhibitor is as follows:
5’-GGAGGCAGACATTGGAGAAAT-3’(SEQ ID No. 1)。
further, the targeting agent can inhibit shRNA sequence of FENDRR gene, the shRNA template sequence comprises a sense strand and an antisense strand, and the sense strand and the antisense strand are respectively:
sense strand:
5' -CACCACCTCGGAGGCAGACATTGGAGAAATTCAAGAGATTTCTCCAATGTCTGCCTCCTT -3'(SEQ ID No. 2)。
antisense strand:
5’-
GATCAAGGAGGCAGACATTGGAGAAATCTCTTGAATTTCTCCAATGTCTGCCTCCGAGGT-3'(SEQ ID No. 3)。
further, transcription product sequences of the shRNA as described above were transcribed:
5' -ACCTCGGAGGCAGACATTGGAGAAATTCAAGAGATTTCTCCAATGTCTGCCTC-3'(SEQ ID No. 4)。
preferably, the inhibitor is in any pharmaceutically therapeutically acceptable dosage form.
Preferably, the inhibitor is in the form of an injection.
Preferably, the inhibitor is in any pharmaceutically therapeutically acceptable dose.
An application of a FENDRR gene inhibitor in preparing a medicament for treating human brain glioma.
Compared with the prior art, the invention has the following technical effects.
1. The targeted inhibitor has strong specificity and inhibits the expression of the FENDRR gene.
2. The FENDRR gene inhibitor is used for targeted therapy, is cooperated with the traditional chemotherapeutic drug, increases the blood and tumor barrier permeability of the chemotherapeutic drug, and can remarkably reduce the problem of low drug concentration in the brain of the traditional therapeutic drug.
3. Experiments prove that the traditional Chinese medicine composition is applied to the in vitro cytology level, has definite treatment effect and does not have adverse reaction.
4. The FENDRR gene inhibitor targeted therapy can improve the chemotherapy curative effect of the glioma, achieve the purpose of treating the glioma, and provide a new thought and a new treatment method for the gene therapy of the glioma.
Drawings
FIG. 1 is a bar graph showing the expression of long non-coding FENDRR genes in normal endothelial cells (control group) and glioma endothelial cells (experimental group).
FIG. 2 is a bar graph showing the effect of transendothelial resistance measurement (A) and horseradish peroxidase permeability assay (B) on BTB permeability after FENDRR gene inhibitor was applied.
FIG. 3 is an electrophoresis and bar graph of Western blot analysis of the effect of FENDRR gene inhibitor on the expression of claudin.
FIG. 4 is a photograph showing the change in expression and distribution of claudin detected by immunofluorescence after application of a FENDRR gene inhibitor.
Detailed Description
The main technical scheme of the invention is as follows.
Design of shRNA and preparation of interference vectors.
And 2, verifying interference efficiency.
Transendothelial resistance measurement.
And 4, horseradish peroxidase permeability test.
5 . Western blot。
And 6, performing cell immunofluorescence experiment.
Examples
1. Establishment of an in vitro haematoma barrier.
hCMEC/D3 cells were cultured in the upper chamber of a transwell chamber (collagen IV coating, 0.4 um porasize, 12 mm diameter, costar, USA) and placed in 6-well plates; simultaneously, human brain glioma U251 cells were seeded at a density of 20000 cells/ml in the wells of another 6-well plate. And (3) transferring the transwell chamber full of the endothelial cells to a hole of a 6-hole plate seeded with human brain glioma U251 cells after the endothelial cells in the chamber grow to be full of a monolayer, giving 1 ml of culture solution to the chamber, giving 2.5 ml of culture solution to the hole of the 6-hole plate, and replacing new culture solution every other day for culturing for 4 days.
2. Real-time quantitative PCR was used to detect FENDRR expression.
(1) Total RNA was extracted from the cells by Trizol method.
(1) The collected cells were washed with cold PBS, blown several times with 1 ml Trizol reagent, and the cells were observed under the microscope to be in the form of oil droplets (fully lysed), transferred to a 1.5 ml EP tube, and left to stand for 5 minutes to be fully lysed.
(2) To the sample was added 0.2 ml of chloroform, and the mixture was allowed to stand at room temperature for 3 minutes by manual vigorous shaking.
(3) Centrifuging at 12000g at 4 deg.C for 15min, adding the upper aqueous phase into a new EP tube, adding 0.5 ml isopropanol, mixing by turning upside down, and standing at room temperature for 10min.
(4) Centrifuging at 12000g at 4 deg.C for 15min, removing supernatant, and adding 1 ml 75% ethanol; after centrifugation at 7500g for 5 minutes at 4 ℃ and drying for 15 minutes, 40. Mu.l of DEPC water was added and the samples were frozen in a freezer at-80 ℃.
(2) And detecting the expression of FENDRR by a one-step dye method qRT-PCR.
CT values were determined using GAPDH as internal reference and 2 -△△Ct The relative expression level of FENDRR was shown.
The expression level of the FENDRR gene in normal brain microvascular endothelial cells and glioma microvascular endothelial cells was examined (as shown in FIG. 1). The expression of FENDRR in the experimental group was significantly increased compared to the normal endothelial group. Data represent mean ± standard deviation (n =3,. Times.p < 0.05).
3. Preparation and application of FENDRR gene inhibitor.
Designing an interference sequence of the FENDRR gene, selecting a target gene sequence which targets the human FENDRR gene and specifically inhibits the FENDRR gene expression as follows:
5 'GGAGGCAGACATTGGAGAAAT-3' GGAGGCAGACATTGGAGAAAT sequence is input in the homologous sequence alignment analysis nucleotide blast of NCBI for alignment analysis, and the result shows that the sequence has no high homology with other human mRNA genes and can be used as a specific sequence for specifically interfering the FENDRR gene.
The shRNA sequence which targets the human FENDRR gene and inhibits the FENDRR gene expression is designed aiming at the target sequence and comprises a sense strand and an antisense strand, and the shRNA sequence is as follows:
a sense strand:
5' -CACCACCTCGGAGGCAGACATTGGAGAAATTCAAGAGATTTCTCCAATGTCTGCCTCCTT -3'。
antisense strand:
5’-
GATCAAGGAGGCAGACATTGGAGAAATCTCTTGAATTTCTCCAATGTCTGCCTCCGAGGT-3'。
transcribing the transcription product of the shRNA with the sequence as follows:
5' -ACCTCGGAGGCAGACATTGGAGAAATTCAAGAGATTTCTCCAATGTCTGCCTC-3'。
the sequence information is designed and synthesized into corresponding plasmids which are used as FENDRR gene inhibitors. FENDRR gene inhibitor transfection: the sh-NC and sh-FENDRR plasmids U6/GFP/Neo silence FENDRR expression, and empty plasmids without FENDRR sequences or shRNA are used as experimental negative controls; culturing the vascular endothelial cells of the glioma by using a 24-hole culture plate, and transfecting when the cell growth reaches about 80%; plasmid, opti-MEM, required for the preparation of transfections ® I and LTX and plus reagent (Life Technologies) transfection reagents. Tube A: one well was dissolved in 50. Mu.l of Opti-MEM as 1. Mu.g of plasmid DNA ® I + 1. Mu.l p3000, left for 5 min: the wells were dissolved in 50. Mu.l of Opti-MEM according to 1. Mu.l of LTX and Plus ® In the step I; mixing the tube A and the tube B uniformly, and standing for 5 min; sucking out the culture solution, adding 100 mu L of transfection mixed solution into each hole, and adding 400 mu L of EBM-2 culture solution; 48 After h, the medium containing the antibiotic G418 with the concentration of 0.4 mg/mL is used for screening, the concentration of the G418 is increased continuously, and a cell line capable of stably silencing MCM3AP-AS1 is obtained after about 4 weeks. In subsequent experiments, the groups were divided into 3 groups, each of which was: is justPerforming common combination; a blank control group transfected with FENDRR silent empty plasmid; inhibitor groups transfected with FENDRR silencing plasmids.
4. Transendothelial resistance values of the normal group, the blank control group and the inhibitor group were measured, respectively.
Determination of transendothelial resistance values after establishment of the in vitro BTB model: the measurement is carried out by adopting millicell-ERS system, firstly, a co-cultured cell culture plate is placed under a constant temperature condition at 37 ℃, electrode plates are respectively placed at the inner side and the outer side of a chamber, after the reading is stable, the result is respectively recorded, each chamber measures three different points, the TEER value is calculated as the multiplication calculation of the reading and the surface area of a Transwell chamber after the average number is taken and the reading of a blank background is subtracted, and the calculation unit is expressed by omega cm <2 >.
The experimental result is shown in fig. 2A, after detecting that the FENDRR gene inhibitor is applied, the transendothelial resistance value of the in vitro blood tumor barrier model is significantly reduced compared with the normal group and the blank control group; suggesting that the BTB permeability in vitro is obviously increased after the FENDRR gene inhibitor is applied.
5. And (3) carrying out horseradish peroxidase permeation quantity experiments on a normal group, a blank control group and an inhibitor group.
After the in vitro BTB model was established, serum-free EBM-2 medium containing 0.5 umol/l horseradish peroxidase was added to the Transwell chamber of the in vitro BTB model. And collecting the culture solution in the lower chamber of the BTB model after 24h, measuring the content of HRP by using a microplate reader, drawing an HRP standard curve by using an HRP standard, and calculating the amount of HRP permeating into the lower chamber. HRP amount = picomole representation of HRP per hour per square centimeter of surface area.
The experimental result is shown in fig. 2B, and after detecting that the FENDRR gene inhibitor is applied, the in vitro blood tumor barrier model horseradish peroxidase permeability is significantly increased compared with the normal group and the blank control group; suggesting that the BTB permeability in vitro is obviously increased after the FENDRR gene inhibitor is applied.
6. Western blot experiment.
(1) Collecting cells, adding RIPA protein lysate, shaking, standing on ice for 30min, and centrifuging at 12000g at 4 deg.C for 30min.
(2) Supernatants were obtained and collected and the protein concentration of the samples was determined using BCA method.
(3) 40mg of protein was mixed with 5 Xloading buffer (1.
(4) Adding the denatured protein into SDS denatured polyacrylamide gel with different concentration of 8-10% for electrophoretic separation.
(5) Film transfer: the voltage is 100V, the current is 120mA, and the time is 90min-200min.
(6) Sealing with 5% skimmed milk for 2h.
(7) The primary antibody dilution diluted the relevant antibody-bound membrane in a certain proportion and was kept at 4 ℃ overnight.
(8) TTBS washing for 5min,3 times, adding corresponding secondary antibody, and incubating for 2h on a shaking table at room temperature.
(9) ECL luminescence, photography, quantification one software quantitative analysis.
The experimental result is shown in fig. 3, and after the FENDRR gene inhibitor is detected and applied, compared with a normal group and a blank control group, the expression levels of tumor vascular endothelial cell tight junction related proteins ZO-1, occludin and Claudin-5 in an in-vitro blood tumor barrier model are obviously reduced.
7. Immunofluorescence.
Endothelial cells were seeded at 2000/cm2 density on 1.5% gelatin-coated coverslips. After 90% confluence, PBS three times each 5min, with 4% paraformaldehyde fixed for 30 minutes. PBS wash three times for 5min,5% BSA block for 15min, then incubate overnight with the corresponding antibody. PBS was washed three times for 5min each, then goat anti-rabbit fluorescent secondary antibody labeled with Cy3 was incubated for 30min in the dark, and nuclei were stained with DAPI according to 1:500 for 10min. PBS was washed three times for each 5min,50% glycerol mounting and visualized on the Olympus BX60 Upper Fluorescence System.
The results of the experiment are shown in FIG. 4: compared with a normal group and a blank control group, after the FENDRR gene inhibitor is detected and applied, the expression of tumor vascular endothelial cell tight junction related proteins ZO-1, occludin and Claudin-5 in an in vitro hematoma barrier model is changed from continuous distribution to discontinuous distribution.
SEQUENCE LISTING
<110> Shengjing Hospital affiliated to Chinese medical university
<120> targeted inhibitor of FENDRR gene and application thereof
<130> 4
<160> 4
<170> PatentIn version 3.3
<210> 1
<211> 21
<212> DNA
<213> Artificial sequence
<400> 1
ggaggcagac attggagaaa t 21
<210> 2
<211> 60
<212> DNA
<213> Artificial sequence
<400> 2
caccacctcg gaggcagaca ttggagaaat tcaagagatt tctccaatgt ctgcctcctt 60
<210> 3
<211> 60
<212> DNA
<213> Artificial sequence
<400> 3
gatcaaggag gcagacattg gagaaatctc ttgaatttct ccaatgtctg cctccgaggt 60
<210> 4
<211> 53
<212> DNA
<213> Artificial sequence
<400> 4
acctcggagg cagacattgg agaaattcaa gagatttctc caatgtctgc ctc 53
Claims (4)
1. The application of the FENDRR gene targeted inhibitor in the preparation of drugs for treating human brain glioma is characterized in that the targeted preparation is a shRNA sequence capable of inhibiting the FENDRR gene, the shRNA template sequence comprises a sense strand and an antisense strand, and the sense strand and the antisense strand are respectively:
a sense strand:
5’ -CACCACCTCGGAGGCAGACATTGGAGAAATTCAAGAGATTTCTCCAATGTCTGCCTCCTT -3’(SEQ ID No. 2);
antisense strand:
5’-
GATCAAGGAGGCAGACATTGGAGAAATCTCTTGAATTTCTCCAATGTCTGCCTCCGAGGT-3’(SEQ ID No. 3)。
2. the use according to claim 1, wherein the targeted inhibitor is in any pharmaceutically and therapeutically acceptable dosage form.
3. The use of claim 1, wherein the targeted inhibitor is in the form of an injectable formulation.
4. The use according to claim 1, wherein the targeted inhibitor is in any pharmacotherapeutically acceptable dose.
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Non-Patent Citations (5)
Title |
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Decreased expression of the long non-coding RNA FENDRR is associated with poor prognosis in gastric cancer and FENDRR regulates gastric cancer cell metastasis by affecting fibronectin1 expression;Tong-peng Xu等;《Journal of Hematology & Oncology》;20140829;1-15 * |
Long non-coding RNA FENDRR inhibits cell proliferation and is associated with good prognosis in breast cancer;Yan Li等;《OncoTargets and Therapy》;20180314;1403-1412 * |
miR-342对胶质瘤细胞增殖,迁移侵袭及凋亡的影响;奚卓等;《解剖科学进展》;20180115;第24卷(第1期);45-48 * |
PM_(2.5)暴露BEAS2B细胞lncRNA FENDRR的表达及其分子机制;林永强等;《环境与健康杂志》;20180520(第05期);13-16 * |
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