CN109679866A - A kind of efficient endo-xylanase produces screening technique and its application of bacterium - Google Patents
A kind of efficient endo-xylanase produces screening technique and its application of bacterium Download PDFInfo
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- CN109679866A CN109679866A CN201811600816.2A CN201811600816A CN109679866A CN 109679866 A CN109679866 A CN 109679866A CN 201811600816 A CN201811600816 A CN 201811600816A CN 109679866 A CN109679866 A CN 109679866A
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- 238000012216 screening Methods 0.000 title claims abstract description 35
- 238000000034 method Methods 0.000 title claims abstract description 34
- 241000894006 Bacteria Species 0.000 title claims abstract description 23
- 108010001817 Endo-1,4-beta Xylanases Proteins 0.000 title claims abstract description 13
- 238000000855 fermentation Methods 0.000 claims abstract description 38
- 230000004151 fermentation Effects 0.000 claims abstract description 38
- 230000001580 bacterial effect Effects 0.000 claims abstract description 32
- 229920001221 xylan Polymers 0.000 claims abstract description 25
- 239000007788 liquid Substances 0.000 claims abstract description 23
- 239000001963 growth medium Substances 0.000 claims abstract description 16
- 238000004519 manufacturing process Methods 0.000 claims abstract description 12
- 238000002360 preparation method Methods 0.000 claims abstract description 11
- 229920001817 Agar Polymers 0.000 claims abstract description 10
- 239000008272 agar Substances 0.000 claims abstract description 10
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 claims description 12
- 239000000243 solution Substances 0.000 claims description 12
- 240000008042 Zea mays Species 0.000 claims description 7
- 235000002017 Zea mays subsp mays Nutrition 0.000 claims description 7
- 241000118654 Saccharothrix variisporea Species 0.000 claims description 6
- 230000007062 hydrolysis Effects 0.000 claims description 6
- 238000006460 hydrolysis reaction Methods 0.000 claims description 6
- 238000012258 culturing Methods 0.000 claims description 5
- 235000019441 ethanol Nutrition 0.000 claims description 5
- 239000000463 material Substances 0.000 claims description 5
- 239000002609 medium Substances 0.000 claims description 5
- 239000006225 natural substrate Substances 0.000 claims description 5
- 229910000396 dipotassium phosphate Inorganic materials 0.000 claims description 4
- 229910000359 iron(II) sulfate Inorganic materials 0.000 claims description 4
- 229910052943 magnesium sulfate Inorganic materials 0.000 claims description 4
- CSNNHWWHGAXBCP-UHFFFAOYSA-L magnesium sulphate Substances [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 claims description 4
- 239000000843 powder Substances 0.000 claims description 4
- VWDWKYIASSYTQR-UHFFFAOYSA-N sodium nitrate Inorganic materials [Na+].[O-][N+]([O-])=O VWDWKYIASSYTQR-UHFFFAOYSA-N 0.000 claims description 4
- 230000001954 sterilising effect Effects 0.000 claims description 4
- 239000006228 supernatant Substances 0.000 claims description 4
- 240000000111 Saccharum officinarum Species 0.000 claims description 3
- 235000007201 Saccharum officinarum Nutrition 0.000 claims description 3
- 238000009264 composting Methods 0.000 claims description 3
- 239000012154 double-distilled water Substances 0.000 claims description 3
- 210000003608 fece Anatomy 0.000 claims description 3
- 238000011534 incubation Methods 0.000 claims description 3
- 239000010871 livestock manure Substances 0.000 claims description 3
- 239000008363 phosphate buffer Substances 0.000 claims description 3
- 229930006000 Sucrose Natural products 0.000 claims description 2
- CZMRCDWAGMRECN-UGDNZRGBSA-N Sucrose Chemical compound O[C@H]1[C@H](O)[C@@H](CO)O[C@@]1(CO)O[C@@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](CO)O1 CZMRCDWAGMRECN-UGDNZRGBSA-N 0.000 claims description 2
- 235000005824 Zea mays ssp. parviglumis Nutrition 0.000 claims description 2
- 235000005822 corn Nutrition 0.000 claims description 2
- 238000010790 dilution Methods 0.000 claims description 2
- 239000012895 dilution Substances 0.000 claims description 2
- 239000008223 sterile water Substances 0.000 claims description 2
- 239000005720 sucrose Substances 0.000 claims description 2
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Chemical compound O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 claims description 2
- IQFVPQOLBLOTPF-HKXUKFGYSA-L congo red Chemical compound [Na+].[Na+].C1=CC=CC2=C(N)C(/N=N/C3=CC=C(C=C3)C3=CC=C(C=C3)/N=N/C3=C(C4=CC=CC=C4C(=C3)S([O-])(=O)=O)N)=CC(S([O-])(=O)=O)=C21 IQFVPQOLBLOTPF-HKXUKFGYSA-L 0.000 abstract description 11
- 238000006243 chemical reaction Methods 0.000 abstract description 9
- 230000008569 process Effects 0.000 abstract description 8
- 244000005700 microbiome Species 0.000 abstract description 6
- 239000000758 substrate Substances 0.000 abstract description 6
- 238000002156 mixing Methods 0.000 abstract description 4
- 230000000813 microbial effect Effects 0.000 abstract description 3
- 108090000790 Enzymes Proteins 0.000 description 18
- 102000004190 Enzymes Human genes 0.000 description 18
- 150000004823 xylans Chemical class 0.000 description 15
- 230000000694 effects Effects 0.000 description 10
- 239000003513 alkali Substances 0.000 description 6
- 235000016383 Zea mays subsp huehuetenangensis Nutrition 0.000 description 5
- HEBKCHPVOIAQTA-NGQZWQHPSA-N d-xylitol Chemical compound OC[C@H](O)C(O)[C@H](O)CO HEBKCHPVOIAQTA-NGQZWQHPSA-N 0.000 description 5
- 235000009973 maize Nutrition 0.000 description 5
- 235000012054 meals Nutrition 0.000 description 5
- 241000204098 Saccharothrix Species 0.000 description 4
- 230000015556 catabolic process Effects 0.000 description 4
- 238000006731 degradation reaction Methods 0.000 description 4
- 230000000593 degrading effect Effects 0.000 description 4
- 239000000975 dye Substances 0.000 description 4
- 230000002255 enzymatic effect Effects 0.000 description 4
- 238000003912 environmental pollution Methods 0.000 description 3
- 239000000203 mixture Substances 0.000 description 3
- 108020004465 16S ribosomal RNA Proteins 0.000 description 2
- 101710121765 Endo-1,4-beta-xylanase Proteins 0.000 description 2
- 229920002488 Hemicellulose Polymers 0.000 description 2
- 238000012408 PCR amplification Methods 0.000 description 2
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 2
- 239000000872 buffer Substances 0.000 description 2
- HVYWMOMLDIMFJA-DPAQBDIFSA-N cholesterol Chemical compound C1C=C2C[C@@H](O)CC[C@]2(C)[C@@H]2[C@@H]1[C@@H]1CC[C@H]([C@H](C)CCCC(C)C)[C@@]1(C)CC2 HVYWMOMLDIMFJA-DPAQBDIFSA-N 0.000 description 2
- 150000001875 compounds Chemical class 0.000 description 2
- 229920001542 oligosaccharide Polymers 0.000 description 2
- 150000002482 oligosaccharides Chemical class 0.000 description 2
- 239000000047 product Substances 0.000 description 2
- KUIXZSYWBHSYCN-UHFFFAOYSA-L remazol brilliant blue r Chemical compound [Na+].[Na+].C1=C(S([O-])(=O)=O)C(N)=C2C(=O)C3=CC=CC=C3C(=O)C2=C1NC1=CC=CC(S(=O)(=O)CCOS([O-])(=O)=O)=C1 KUIXZSYWBHSYCN-UHFFFAOYSA-L 0.000 description 2
- 238000007873 sieving Methods 0.000 description 2
- 125000001424 substituent group Chemical group 0.000 description 2
- 239000002023 wood Substances 0.000 description 2
- QKNYBSVHEMOAJP-UHFFFAOYSA-N 2-amino-2-(hydroxymethyl)propane-1,3-diol;hydron;chloride Chemical compound Cl.OCC(N)(CO)CO QKNYBSVHEMOAJP-UHFFFAOYSA-N 0.000 description 1
- 241000609240 Ambelania acida Species 0.000 description 1
- 239000004382 Amylase Substances 0.000 description 1
- 102000013142 Amylases Human genes 0.000 description 1
- 108010065511 Amylases Proteins 0.000 description 1
- 235000018185 Betula X alpestris Nutrition 0.000 description 1
- 235000018212 Betula X uliginosa Nutrition 0.000 description 1
- 241000186000 Bifidobacterium Species 0.000 description 1
- 102000016928 DNA-directed DNA polymerase Human genes 0.000 description 1
- 108010014303 DNA-directed DNA polymerase Proteins 0.000 description 1
- 241000196324 Embryophyta Species 0.000 description 1
- 240000007594 Oryza sativa Species 0.000 description 1
- 235000007164 Oryza sativa Nutrition 0.000 description 1
- 238000002835 absorbance Methods 0.000 description 1
- 125000002777 acetyl group Chemical group [H]C([H])([H])C(*)=O 0.000 description 1
- 239000002253 acid Substances 0.000 description 1
- 235000019418 amylase Nutrition 0.000 description 1
- 125000000089 arabinosyl group Chemical group C1([C@@H](O)[C@H](O)[C@H](O)CO1)* 0.000 description 1
- 239000010905 bagasse Substances 0.000 description 1
- 239000002585 base Substances 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- 230000003185 calcium uptake Effects 0.000 description 1
- 150000001720 carbohydrates Chemical group 0.000 description 1
- 239000001913 cellulose Substances 0.000 description 1
- 229920002678 cellulose Polymers 0.000 description 1
- 235000012000 cholesterol Nutrition 0.000 description 1
- 230000004087 circulation Effects 0.000 description 1
- 101150024923 da gene Proteins 0.000 description 1
- 238000007865 diluting Methods 0.000 description 1
- 150000002148 esters Chemical class 0.000 description 1
- 239000000284 extract Substances 0.000 description 1
- 235000013305 food Nutrition 0.000 description 1
- 235000011389 fruit/vegetable juice Nutrition 0.000 description 1
- 210000001035 gastrointestinal tract Anatomy 0.000 description 1
- 125000002791 glucosyl group Chemical group C1([C@H](O)[C@@H](O)[C@H](O)[C@H](O1)CO)* 0.000 description 1
- 239000007986 glycine-NaOH buffer Substances 0.000 description 1
- 238000011081 inoculation Methods 0.000 description 1
- 230000007413 intestinal health Effects 0.000 description 1
- 238000009629 microbiological culture Methods 0.000 description 1
- 239000013642 negative control Substances 0.000 description 1
- 239000000049 pigment Substances 0.000 description 1
- 238000004321 preservation Methods 0.000 description 1
- 230000002035 prolonged effect Effects 0.000 description 1
- 108090000623 proteins and genes Proteins 0.000 description 1
- 238000004537 pulping Methods 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 230000004044 response Effects 0.000 description 1
- 235000009566 rice Nutrition 0.000 description 1
- 238000012163 sequencing technique Methods 0.000 description 1
- 239000011780 sodium chloride Substances 0.000 description 1
- 238000007447 staining method Methods 0.000 description 1
- 238000005303 weighing Methods 0.000 description 1
- 235000015099 wheat brans Nutrition 0.000 description 1
- 125000000969 xylosyl group Chemical group C1([C@H](O)[C@@H](O)[C@H](O)CO1)* 0.000 description 1
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/20—Bacteria; Culture media therefor
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/02—Separating microorganisms from their culture media
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
- C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
- C12N9/2477—Hemicellulases not provided in a preceding group
- C12N9/248—Xylanases
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/02—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving viable microorganisms
- C12Q1/04—Determining presence or kind of microorganism; Use of selective media for testing antibiotics or bacteriocides; Compositions containing a chemical indicator therefor
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y302/00—Hydrolases acting on glycosyl compounds, i.e. glycosylases (3.2)
- C12Y302/01—Glycosidases, i.e. enzymes hydrolysing O- and S-glycosyl compounds (3.2.1)
- C12Y302/01008—Endo-1,4-beta-xylanase (3.2.1.8)
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Abstract
The present invention provides screening technique and its application of a kind of efficient endo-xylanase production bacterium, comprising: (1) sample source;(2) bacterial strain screening;(3) preparation of zytase fermentation liquid, the present invention carries out being separately cultured for bacterial strain in growth medium first, double-layer agar technique is recycled to carry out the screening of bacterial strain, Azo-xylan (Birchwood) is added in the culture medium of upper layer as screening substrate, this method, which can solve, first cultivates microorganism, it adds Congo red solution and carries out the problem of mixing during color reaction between bacterium colony, it can also solve to be added when preparing plate Congo red, then carry out the false positive issue occurred in microbial cultivation process.
Description
Technical field
The invention belongs to field of biotechnology, and in particular to it is a kind of effect endo-xylanase production bacterium screening technique and its
Using.
Background technique
Hemicellulose is to be present in resource very rich in nature, accounts for about the 35% of plant dry weight, is widely present in
In agricultural and sideline product such as corncob, wheat bran, rice bran, stalk and bagasse, content is only second to cellulose in nature.Xylan is
The important component of hemicellulose is to constitute main chain, main chain through β-Isosorbide-5-Nitrae-glucosides key connection by β-D- pyranoid form xylose units
It is upper different with a variety of different substituent groups, source or branch degrees such as acetyl group, arabinose residues and glucose residues
The xylan molecule of main side chain and the complexity that different substituent groups collectively forms and multiplicity.The degradable needs of xylan are a variety of
The common participation of enzyme, including β-Isosorbide-5-Nitrae-endo-xylanase (EC3.2.1.8), xylobiase, (EC3.3.1.37) and asafoetide
Acid esters enzyme (EC3.1.1.73) etc., wherein β-Isosorbide-5-Nitrae-endo-xylanase acts on xylan backbone and generates different chain length
Oligosaccharides is the enzyme of most critical in xylanolytic enzyme system, at the same be also study at present it is more, using wide xylan degrading
Enzyme.There is highly selective cultivation effect to Bifidobacterium etc. in animal intestinal tract using the xylo-oligosaccharide of Production by Enzymes, works as in reduction
Cholesterol maintains intestinal health and promotion calcium uptake etc. to have important role.In addition, zytase pulping and paper-making,
Food, feed addictive and bioconversion etc. all play an important role.
The screening of xylan degrading bacterial strain is mostly used congo red staining method at present, and mainly by two ways, a kind of mode is
Microorganism is first cultivated, Congo red solution is added and carries out color reaction, then decolourize to form wood not of uniform size by sodium chloride
The advantages of Polyose degradation transparent circle, this mode is the effect that the color reaction shown is substantially xylan degrading bacterium, is lacked
Point is which is cumbersome, and Congo red solution, which is added, can make to mix between bacterium colony;Another way is to prepare plate
When be added it is Congo red, the advantages of which be it is easy to operate, bacterium colony mixed questions are not present, the disadvantage is that in agar, murphy juice all
Containing starchy material, the microorganism for generating amylase can be made false positive reaction occur, it is in addition certain that there is degradation pigment ability
Microorganism can degrade in prolonged incubation Congo red and form transparent circle, be not easy and xylan degrading bacterium distinguish.
The present invention carries out being separately cultured for bacterial strain in growth medium first, and double-layer agar technique is recycled to carry out the screening of bacterial strain, upper layer
Azo-xylan (Birchwood) is added in culture medium as screening substrate, can solve the above problem, can quickly, it is accurate, have
The screening endo-xylanase of effect produces bacterial strain.In addition, the bacterial strain Saccharothrix screened using this method
Variisporea YJ is different from the bacterial strain of previously reported screening, and produced zytase can be produced with direct hydrolysis maize cob meal
Xylo-oligosaccharide eliminates the step of alkali process corncob prepares xylan, to reduce environmental pollution and production cost.
Summary of the invention
For the problem, the present invention are screening substrate with Azo-xylan (Birchwood) in the prior art above,
Using double-layer agar technique, can solve the above problem.Azo-xylan (Bichwood) be origin derived from birch xylan with
Dyestuff Remazol brilliant blue R combines high-molecular compound (the 1 Remazol brilliant blue generated
R combines 20 saccharide residues);Zytase can degrade Azo-xylan generate low molecular weight dye composition and oligosaccharide,
The dye composition of low molecular weight is soluble (pellucidity is presented in the culture medium of upper panel) in ethanol solution,
And the dye composition of high molecular weight is then rendered as precipitated form in ethanol solution and (presents in the culture medium of upper panel blue
Color state).The present invention adds Azo-xylan as screening substrate in upper panel, produces the bacterial strain of zytase on upper layer
Transparent circle is generated in plate, the screening endo-xylanase that this method can be quick, accurate and effective produces bacterial strain.The present invention is logical
Cross following technical scheme realization: a kind of efficient endo-xylanase produces screening technique and its application of bacterium, including following step
It is rapid:
(1) sample source: banking up fermentation time as 3d, pig manure and the sugarcane top hybrid composting 20g that fermentation temperature is 40 DEG C,
Initial C/N ratio is 25:1, moisture content 60%, and initial pH is 8.0 to obtain fermentation material;
(2) bacterial strain screening: the fermentation material in 1g step (1) is taken to be added in the sterile water of 10mL, then gradient dilution is at 10-6-10-8, take 100 μ L to be coated on growth medium, the screening and culturing medium of falling upper layer after 35 DEG C of culture 3-4d, 35 DEG C are continued to cultivate
The ethyl alcohol of 2ml 95% is added in 1d, and the bacterium colony scribing line culture of hydrolysis circle is selected with transfer needle, obtains purifying bacterial strain;It is ordered
Entitled Saccharothrix variisporeaYJ was preserved in Guangdong Province's Microbiological Culture Collection on September 5th, 2018
The heart, deposit number are as follows: GDMCC NO:60442, address: 5 building, the building of compound the 59th of Xianlie Middle Road, Guangzhou City 100.
(3) preparation of zytase fermentation liquid: the pure culture bacterial strain that step (2) screens is seeded to 20ml grown cultures
In base, in 35 DEG C, 160rpm overnight incubation, as the seed liquor for preparing zytase fermentation liquid;1ml seed liquor is taken to be seeded to
In the sterile fermentation culture of 100ml, after 40 DEG C, 160rpm, shake culture 6d, 12000rpm is centrifuged 5min, takes the supernatant to be
Fermentation produces the fermentation liquid of zytase;
(4) corncob that obtained zytase fermentation liquid is milled to 150 mesh to natural substrate is degraded, by 5-
After the processing of 7h, reduced sugar can be obtained from corncob.
The growth medium is the preparation method comprises the following steps: NaNO32.0g, K2HPO41.0g, KCl 0.5g, MgSO40.5g,
FeSO40.01g, sucrose 10g, 15g agar powder, ddH2O are settled to 1000ml, 115 DEG C of sterilizing 25min.
The upper layer screening and culturing medium is the preparation method comprises the following steps: agar powder 1g, Azo-xylan 20ml, phosphate buffer
(20mM, pH8.0) is settled to 100ml;
The fermentation culture is the preparation method comprises the following steps: NaNO32.0g, K2HPO41.0g, KCl 0.5g, MgSO40.5g,
FeSO40.01g, corncob 4.0g are sieved by 60 mesh, are settled to 1000ml, 115 DEG C of sterilizing 25min.
The identification of Saccharothrix variisporeaYJ bacterial strain:
Genome, 16S rDNA gene PCR amplification: 50 μ l systems, 25 μ l are extracted using bacterium extracts kit
PrimerSTAR Max archaeal dna polymerase (2 ×), 1 μ l template, primers F (5'-AAATTTTTTTTCCCCCCCGG-3') and R (3
' GGGCCCCCTTTAAAAAAAAAC-5') each 1 μ l, 22 μ l ddH2O;Response procedures: 98 DEG C of 4min, 98 DEG C of 10sec, 55 DEG C
10sec, 72 DEG C of 1min 30 circulations, 72 DEG C of extension 10min, PCR product send Hua Da gene sequencing.
Extracted through DNA, PCR amplification, sequence and comparison, find the 16S rDNA sequence of the bacterial strain with
The homology highest of Saccharothrix variisporea is 99.33%.The bacterial strain is initially identified as
Saccharothrix variisporea is named as Saccharothrix variisporea YJ and (is preserved in Guangdong
Save Culture Collection, deposit number are as follows: 60442).Sequence is as follows:
GGGCTTCGGGTGTTACCGACTTTCGTGACG TGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCA
CCGCAG CGTTGCTGATCTGCGATTACTAGCGACTCCGACTTCACGGGGTC GAGTTGCAGACCCCGATCCGAACT
GAGACCGGCTTTGTGGGAT TCGCTCCACCTCACGGCTTAGCAGCCCTCTGTACCGGCCATTGT AGCATGTGTGA
AGCCCTGGACATAAGGGGCATGATGACTTGAC GTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCCATG
AGTCCCCGCCATAACGCGCTGGCAACATGGAACGAGGGTTGCG CTCGTTGCGGGACTTAACCCAACATCTCACGA
CACGAGCTGAC GACAGCCATGCACCACCTGTACACCAGTCCGAAGAGGCCTACA TCTCTGCAGGTTTCCGGTGC
ATGTCAAGCCCAGGTAAGGTTCTT CGCGTTGCATCGAATTAATCCACATGCTCCGCCGCTTGTGCGGG CCCCCG
TCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCC CAGGCGGGGTGCTTAATGCGTTAGCTGCGGCACGGAG
AACGTG GAAGTCCCCCACACCTAGCACCCACCGTTTACGGCGTGGACTA CCAGGGTATCTAATCCTGTTCGCTC
CCCACGCTTTCGCTCCTCA GCGTCAGTATCGGCCCAGAGACCCGCCTTCGCCACCGGTGTTC CTCCTGATATCT
GCGCATTTCACCGCTACACCAGGAATTCCAGT CTCCCCTGCCGAACTCAAGTCTGCCCGTATCGACCGCAGGCTCC
ACGTTAAGCGTGAAGTTTTCACGGCCGACGCAACAAACCGCCT ACGAGCTCTTTACGCCCAATAATTCCGGACAA
CGCTCGCACCCT ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTCTT CTGCAGGTACCGTCACTC
ACGCTTCGTCCCTGCTGAAAGAGGT TTACAACCCGAAGGCCGTCATCCCTCACGCGGCGTCGCTGCATC AGGCT
TTCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTA GGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCG
GTCACCCT CTCAGGCCGGCTACCCGTCGTCGCCTTGGTAGGCCATCACCCCA CCAACAAGCTGATAGGCCGCGG
GTCCATCCCGTACCGCCGGAA CTTTCCACCACCACGGATGCCTGAAGTGGTCATATCCGGTATTA GACCTAGTT
TCCCAGGCTTATCCCAGAGTACAGGGCAGGTTACC CACGTGTTACTCACCCGTTCGCCGCTCGTGTACCCCGAAG
GGCC。
Beneficial effects of the present invention
(1) present invention carries out being separately cultured for bacterial strain in growth medium first, and double-layer agar technique is recycled to carry out bacterial strain
Screening, as screening substrate, this method, which can solve, is first cultivated for addition Azo-xylan (Birchwood) in the culture medium of upper layer
Microorganism adds Congo red solution and carries out the problem of mixing during color reaction between bacterium colony, can also solve
It is added Congo red when preparing plate, then carries out the false positive issue occurred in microbial cultivation process.
(2) bacterium of bacterial strain the Saccharothrix variisporea YJ and previously reported screening screened with this method
Strain is different, and produced zytase can produce xylo-oligosaccharide with direct hydrolysis maize cob meal, eliminates the preparation of alkali process corncob
The step of xylan, to reduce environmental pollution and production cost.
(3) bacterial strain Saccharothrix variisporea YJ fermentation liquid can be to the corncob of 150 mesh of natural substrate
It degrades, after the processing of 6h, (0.88mg) reduced sugar can be obtained from corncob, be to extract corn through alkali process method
Core xylan carries out 22 times (0.04mg) of gained xylo-oligosaccharide after fermentation liquor treatment 6h again.
Detailed description of the invention
Fig. 1 is the screening for producing endo-xylanase bacterial strain;
Fig. 2 is influence of the temperature to xylanase activity and stability;
Fig. 3 is influence of the pH to enzymatic activity.
Specific embodiment
Embodiment 1
Produce the screening of zytase bacterial strain
It from the sample of pig manure and sugarcane top hybrid composting, is coated in growth medium after diluting, 35 DEG C of cultures
The screening and culturing medium of falling upper layer after 3d, as shown in Figure of description 1A, can be formed by producing by one around the bacterial strain of endo-xylanase
Transparent circle.It is crossed with aseptic inoculation needle picking colony, carries out secondary screening after 35 DEG C of culture 3d, as a result in bacterium shown in Figure of description 1B
There is apparent hydrolysis circle on the periphery fallen.
The preparation of zytase fermentation liquid
(1) the pure culture bacterial strain that picking screens, is seeded in 20ml sterile growth media, and 35 DEG C, 160rpm culture
Overnight, as the seed liquor for preparing zytase fermentation liquid;
(2) 1ml seed liquor is taken to be seeded in the sterile fermentation culture of 100ml, after 40 DEG C, 160 rpm, shake culture 6d,
12000rpm is centrifuged 5min, and taking supernatant is the fermentation liquid for fermenting and producing zytase.
The zytase zymologic property of fermentation liquid
100 μ l fermentation liquids are taken, 100 μ l 1%AZO-xylan (Birchwood), 55 DEG C of water-baths 2min, 8000rpm are added,
It is centrifuged 5min, the ethyl alcohol of 500 μ l 95% is added, is placed at room temperature for 5min after mixing, supernatant is taken to measure absorbance value in 590nm.Slightly
Negative control is used as after 100 DEG C of processing 10min of enzyme solution, 3, enzyme solution sample parallel.
(1) optimal reactive temperature: its enzymatic activity is measured according to the above method under conditions of reaction temperature is 30-65 DEG C, is obtained
To its optimal reactive temperature (be denoted as 100% when enzyme activity highest).
(2) optimal reaction pH: fermentation liquid pH is respectively to pH 6.0-8.0 (100mM phosphate buffer), pH 7.5- for adjustment
9.0 (100mM Tris-HCl buffers), pH 8.5-10.0 (100 mM glycine-NaOH buffer), then most suitable anti-
The xylanase activity of crude enzyme liquid is measured at a temperature of answering (be denoted as 100% when enzyme activity highest).
(3) temperature stability: fermentation liquid is kept the temperature under the conditions of 30,35,40,45,50,55,60,65 and 75 DEG C respectively
Then 3h measures remaining enzyme activity under the conditions of optimal reactive temperature and pH, obtains the thermal stability of enzyme, to save under the conditions of 4 DEG C
The enzymatic activity of enzyme solution be defined as 100%, see Figure of description 2.
(4) pH stability: by fermentation liquid respectively in the buffer of pH4.0,5.0,6.0,7.0,8.0,9.0 and 10.0
30min is placed, remaining enzyme activity is then measured under the conditions of optimal reactive temperature and pH, the pH stability of enzyme is obtained, with 4 DEG C of conditions
The enzymatic activity of the enzyme solution of lower preservation is defined as 100%, is specifically shown in Figure of description 3.
(5) degradation of the bacterial strain fermentation liquor to corncob: the maize cob meal of 150 mesh of 0.05g sieving is weighed, is added 1.0mL's
Fermentation liquid under the conditions of 45 DEG C after 6h, takes 200 μ L reaction solutions, and 200 μ L DNS, 100 DEG C of water-bath 10min are added and use spectrophotometer
OD value is surveyed at 520nm.
Degradation of xylan enzyme of the fermentation liquid to corncob: fermentation liquid can drop the corncob of 150 mesh of natural substrate
Solution, after the processing of 6h, can obtain the reduced sugar of 0.88mg from corncob.
Embodiment 2
The maize cob meal for weighing the sieving of 150 mesh of 0.05g is taken using conventional alkali carries and is handled corncob, remaining is same
Embodiment 1, obtaining reduced sugar is 0.04mg.
In conclusion the double-layer agar technique that the present invention uses (adds Azo-xylan (Birchwood) in the culture medium of upper layer
As screening substrate) zytase production bacterial strain is screened, this method both can solve and first cultivate microorganism, adds Congo red molten
Liquid carries out the problem of mixing between bacterium colony during color reaction, can also solve to be added when preparing plate it is Congo red,
The false positive issue occurred in microbial cultivation process is carried out again;In addition, the bacterial strain Saccharothrix screened with this method
Variisporea YJ is different from the bacterial strain of previously reported screening, and produced zytase can be produced with direct hydrolysis maize cob meal
Xylo-oligosaccharide eliminates the step of alkali process corncob prepares xylan, to reduce environmental pollution and production cost;And
And the bacterial strain fermentation liquor can degrade to the corncob of 150 mesh of natural substrate, it, can be from corncob after the processing of 6h
The reduced sugar for obtaining 0.88mg is to extract the oligomeric wood of gained after Corncob Xylan carries out fermentation liquor treatment 6h again through alkali process method
22 times (0.04mg) of sugar.
Claims (4)
1. screening technique and its application of a kind of efficient endo-xylanase production bacterium, it is characterised in that: the following steps are included:
(1) sample source: banking up fermentation time as 3d, pig manure and the sugarcane top hybrid composting 20g that fermentation temperature is 40 DEG C, initially
C/N ratio is 25:1, and moisture content 60%, initial pH is 8.0 to obtain fermentation material;
(2) bacterial strain screening: the fermentation material in 1g step (1) is taken to be added in the sterile water of 10mL, then gradient dilution is at 10-6-10-8, take 100 μ L to be coated on growth medium, the screening and culturing medium of falling upper layer after 35 DEG C of culture 3-4d, 35 DEG C are continued to cultivate 1d, are added
The ethyl alcohol for entering 2ml 95% selects the bacterium colony scribing line culture of hydrolysis circle with transfer needle, repeats step (2) until obtaining purifying bacterium
Strain;It is named as Saccharothrix variisporea YJ and is now preserved in Guangdong Province's Culture Collection, protected
Hiding number are as follows: GDMCC NO:60442;
(3) preparation of zytase fermentation liquid: the pure culture bacterial strain that step (2) screens is seeded in 20ml growth medium,
In 35 DEG C, 160rpm overnight incubation, as the seed liquor for preparing zytase fermentation liquid;Take 1ml seed liquor be seeded to 100ml without
In bacterium fermentation culture, after 40 DEG C, 160rpm, shake culture 6d, 12000rpm is centrifuged 5min, takes supernatant, must both ferment production
The fermentation liquid of zytase;
(4) corncob that obtained zytase fermentation liquid is milled to 150 mesh to natural substrate is degraded, by 5-7h's
After processing, reduced sugar can be obtained from corncob.
2. screening technique and its application of a kind of efficient endo-xylanase production bacterium according to claim 1, the life
Long culture medium is the preparation method comprises the following steps: NaNO32.0g, K2HPO41.0g, KCl 0.5g, MgSO40.5g, FeSO40.01g, sucrose
10g, 15g agar powder, ddH2O is settled to 1000ml, 115 DEG C of sterilizing 25min.
3. screening technique and its application of a kind of efficient endo-xylanase production bacterium according to claim 1, it is described on
Layer screening and culturing medium is the preparation method comprises the following steps: agar powder 1g, Azo-xylan 20ml, phosphate buffer (20mM, pH8.0) are settled to
100ml。
4. screening technique and its application of a kind of efficient endo-xylanase production bacterium according to claim 1, the hair
Ferment culture solution is the preparation method comprises the following steps: NaNO32.0g, K2HPO41.0g, KCl 0.5g, MgSO40.5g, FeSO40.01g, corn
Core 4.0g is sieved by 60 mesh, is settled to 1000ml, 115 DEG C of sterilizing 25min.
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CN1261913A (en) * | 1997-07-04 | 2000-08-02 | 诺沃挪第克公司 | Endo-beta-1,4-glucanases from saccharothrix |
CN102002471A (en) * | 2010-11-05 | 2011-04-06 | 广东溢多利生物科技股份有限公司 | Novel xylanase V-XYL as well as gene, high-efficiency expression method and application thereof |
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