CN109609424A - For producing the Escherichia coli of farnesene - Google Patents

For producing the Escherichia coli of farnesene Download PDF

Info

Publication number
CN109609424A
CN109609424A CN201811596736.4A CN201811596736A CN109609424A CN 109609424 A CN109609424 A CN 109609424A CN 201811596736 A CN201811596736 A CN 201811596736A CN 109609424 A CN109609424 A CN 109609424A
Authority
CN
China
Prior art keywords
farnesene
application
plasmid
escherichia coli
constructed
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
CN201811596736.4A
Other languages
Chinese (zh)
Other versions
CN109609424B (en
Inventor
陈正杰
蒋宇
童阳阳
许崇茂
吴宇辉
杨俊杰
杨晟
张芸
赵梦凡
朱丽
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Zhejiang Medicine Co Ltd
Original Assignee
Zhejiang Medicine Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Zhejiang Medicine Co Ltd filed Critical Zhejiang Medicine Co Ltd
Priority to CN201811596736.4A priority Critical patent/CN109609424B/en
Publication of CN109609424A publication Critical patent/CN109609424A/en
Application granted granted Critical
Publication of CN109609424B publication Critical patent/CN109609424B/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/88Lyases (4.)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/70Vectors or expression systems specially adapted for E. coli
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P5/00Preparation of hydrocarbons or halogenated hydrocarbons
    • C12P5/02Preparation of hydrocarbons or halogenated hydrocarbons acyclic
    • C12P5/026Unsaturated compounds, i.e. alkenes, alkynes or allenes
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y402/00Carbon-oxygen lyases (4.2)
    • C12Y402/03Carbon-oxygen lyases (4.2) acting on phosphates (4.2.3)
    • C12Y402/03047Beta-farnesene synthase (4.2.3.47)

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Biomedical Technology (AREA)
  • Molecular Biology (AREA)
  • General Chemical & Material Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Medicinal Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Plant Pathology (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)

Abstract

The present invention constructs a kind of β-farnesene production bacterium by genetic engineering, is preserved in China Committee for Culture Collection of Microorganisms's common micro-organisms center, deposit number is CGMCC No.16709.β of the invention-farnesene production bacterium can be realized the effective accumulation of β-farnesene in fermentation liquid by fermentation, and β-farnesene yield is up to 250mg/L, has industrial prospect.

Description

For producing the Escherichia coli of farnesene
Technical field
The invention belongs to genetic engineering fields, specifically, being related to a kind of genetic engineering production bacterium of high yield β-farnesene.
Background technique
Aphid secrets out of a kind of " alarm pheromones " in the Shi Kecong cornical that gets a fright, so that surrounding other aphids perception And escape rapidly, to stop the infringement to crop.Bowers is equal to separation for the first time in 1972 and identifies Aphid Alarm Pheromone Trans-beta-farnesene (E- β-farnesene, abbreviation E β F or EBF), E β F is a kind of sesquiterpenoids substance.The discovery such as Francis EBF be 16 kinds of Aphid Alarm Pheromones main or sole component (Bowers et al., 1972;Francis et al., 2005).The parapheromone is applied to field, can make the control of a certain range of aphid insect density within thresholding, at this time worm, Influence of the disease to crop is little.E β F be not only present in aphid alarm hormone in and many Secondary metabolites it One.E β F ingredient is rich in many plants, purifying by classification can get high concentration essential oil, such as Labiatae Hemizygia E β F component content is up to 70% or more (Bruce et al., 2005) in petiolata plant;Umbelliferae Pimpinella E β F ingredient also has higher content (Askari et al., 2013) in the stem of khorasanica plant, flower and seed.In addition to Except alarm activity, EBF also has other multi-biological activity, such as has the function of similar juvenile hormone III to certain insects Can, have the function of regulation aphid offspring in alatae and wingless aphid ratio, high dose using when have obvious poisoning to aphid Effect etc..Therefore, prevention and control of aphids is carried out using the biological characteristics of natural EBF, has dosage few, specificity is strong, to non-target The advantages that biology and Environmental security, cause the favor of plant protection expert and agricultural producer.Meanwhile based on natural EBF Structure and transformation are carried out, EBF analog is made to develop hypotoxicity or avirulent novel pesticide is the research of field of agricultural sciences One of hot spot.
In addition, it has been found that β-farnesene is other than it can be applied to pesticide field, also in chemical field and medicine neck Domain has many purposes, for example for synthesising complex E etc., has a vast market value, receive the wide of people in recent years General concern.
Content of the farnesene in plant is very low, can not be prepared in a manner of extracting natural products;Chemical synthesis Cost it is high, and purity is lower;Thus seem that becoming people utilizes this native compound using production in microorganisms Buddhist nun's alkene Best mode.The maximum bottleneck of microbe fermentation method is, the expression of enzyme relevant to its biosynthesis in microbial cells It is horizontal lower.Therefore, it is to move towards work that building, which high-level can synthesize β-farnesene and be suitable for the engineering bacteria of industrial applications, The key of industry.
Summary of the invention
In order to overcome the horizontal low defect of existing β-farnesene production strain fermentation, the present invention using technique for gene engineering come Transformation produces the Escherichia coli of isoprene, by enhancing gene relevant to β-farnesene generation, replacement isoprene branch generation It thanks to approach, obtains a plant height and produce β-farnesene production bacterial strain.
Therefore, the first purpose of this invention is to provide a kind of β-farnesene production bacterium.
Second object of the present invention is to provide the β-farnesene production bacterium for producing the application of β-farnesene.
Third object of the present invention, which is to provide, a kind of produces β-farnesene method.
In order to achieve the above object, the present invention carries out gene relevant to β-farnesene metabolic pathway in Escherichia coli Systematic research and screening, and
Design the construction of genetic engineering and screening scheme included the following steps:
A. plasmid PHGFH is constructed, it includes petH, petF, ispG, ispH, duplicate field p15A genes;
Plasmid PAGEs is constructed, it includes mvaE, mvaS, fldA, ispG, replicon repA genes;
Plasmid pAKF is constructed, it includes the ispA of Escherichia coli, the mvaK (base in geneva sarcina methanica source Because being had been described in document Chen Yang, et al., Metabolic Engineering.37 (2016) 79-91.), sequence Codon optimization bfs (β-farnesene synthase gene, β-Farmesene synthase gene), duplication for SEQ ID NO:1 Sub- ColE1 gene;
B. it will enter Escherichia coli to plasmid PHGFH, PAGEs and pAKF corotation constructed in step A, can preferably produce isoamyl In the Escherichia coli of diene, the positive colony comprising gene mvaE, mvaS, mk, pmk, pmd, idi, ispA and bfs is obtained, The middle Escherichia coli for producing isoprene include gene mk, pmk, pmd and idi of mevalonate pathway;
C. from positive colony constructed in step B, production β-farnesene bacterial strain is filtered out.
Preferably, the Escherichia coli for isoprene being produced described in step B are document (Synergy between methylerythritol phosphate pathway and mevalonate pathway for isoprene production in Escherichia coli.Chen Yang,et al.,Metabolic Engineering,37 (2016) 79-91) bacterial strain CIBTS1758 described in.
It is constructed by said gene engineering, filters out a kind of bacterial strain of high yield β-farnesene, be now preserved in China Microbiological Culture presevation administration committee common micro-organisms center, deposit number are CGMCC No.16709.
The genetic engineering bacterium CGMCC No.16709 of building include related gene mvaE, mvaS of mevalonate pathway, mk, Bfs (β-the farnesene that pmk, pmd, idi and farnesene synthesis related gene ispA and sequence are SEQ ID NO:1 Synthase gene, β-Farmesene synthase gene), wherein the Escherichia coli for producing isoprene are substituted in gene ispA Original ispS gene in CIBTS1758.
According to the second aspect of the invention, said gene engineering bacteria CGMCC No.16709 is provided in β-farnesene Application in production.
In one embodiment, β-farnesene is produced by being fermented to above-mentioned β-farnesene production bacterium.
Wherein, culture medium used when fermentation can be any culture medium suitable for Escherichia coli Growth fermentation.
In a preferred embodiment, include when above-mentioned β-farnesene production bacterium is fermented seed growth phase and Thallus fermentation stage (production fermentation stage).The two stages use seed culture medium and production fermentation medium respectively, can be with It is not identical.
Preferably, seed culture medium is, for example, LB culture medium, may include 100 μ g/ml ampicillins, 34 μ g/ml Chloramphenicol and 100 μ g/ml spectinomycins.It is, for example, V7S culture medium that seed, which expands culture medium, may include 100 μ g/ml ammonia benzyls Penicillin, 34 μ g/ml chloramphenicol and 100 μ g/ml spectinomycins.Producing fermentation medium is, for example, V7E culture medium, be can wrap Containing 100 μ g/ml ampicillins, 34 μ g/ml chloramphenicol and 100 μ g/ml spectinomycins and 0.1mM IPTG.
The V7S culture medium composition is as follows: glucose 10g/L, yeast powder 5g/L, MOPS 0.1M/L, (NH4)2SO4 5g/ L, Na2HPO41g/L, KH2PO40.4g/L, MgSO40.5g/L, CaCl2·2H2O 0.1g/L, vitamin B12 mg/L, 100 Times trace element solution (Citric Acid Mono 10g/L, MnSO4·7H2O 2g/L,FeSO4·7H2O 0.5g/L,ZnSO4·7H2O 0.2g/L,CuSO4·5H2O 0.05g/L,0.05g CoCl2·6H2O,Na2MoO4·2H2O 0.05g/L)。
The V7E culture medium composition is as follows: glucose 5g/L, yeast powder 1g/L, MOPS 0.1M/L, (NH4)2SO4 5g/ L, Na2HPO41g/L, KH2PO40.4g/L, MgSO40.5g/L, CaCl2·2H2O 0.1g/L, vitamin B1 2mg/L, 100 Times trace element solution (Citric Acid Mono 10g/L, MnSO4·7H2O 2g/L,FeSO4·7H2O 0.5g/L,ZnSO4·7H2O 0.2g/L,CuSO4·5H2O 0.05g/L,0.05g CoCl2·6H2O,Na2MoO4·2H2O 0.05g/L).Institute's structure of the present invention It builds β-farnesene production bacterium CGMCC No.16709 and the effective accumulation of β-farnesene in fermentation liquid, β-method can be realized by fermentation Buddhist nun's alkene yield is up to 10mg/L, has industrial applications prospect.
The β that the present invention constructs-farnesene high-yield genetic engineering bacterium Classification system is Escherichia coli, Chinese name Title is escherichia coli, that is, Escherichia coli have been preserved in China Committee for Culture Collection of Microorganisms's common micro-organisms The heart, preservation date are on November 05th, 2018, and preservation address is the Yard 1, BeiChen xi Road, Chaoyang District, Beijing City 3 Chinese Academy of Sciences Institute of microbiology, deposit number are CGMCC No.16709.
Detailed description of the invention
Fig. 1 is the structural schematic diagram of plasmid pAKF.
Fig. 2 is the metabolic pathway variation schematic diagram for the Escherichia coli CIBTS2509C that the present invention constructs.Original strain CIBTS1758 is isoprene producing strains, comprising being overexpressed MEP approach, relative to more original E. coli BL21 For, which introduce Eukaryotic MVA approach.On the basis of isoprene producing strains CIBTS1758, through base of the invention After engineered, farnesyl pyrophosphate synthase IspA is replaced into isoprene synthase IspS, and introduce β-Farmesene synthase BFS (its encoding gene be sequence be SEQ ID NO:1 bfs), enhance gene relevant to β-farnesene generation, be substituted it is different Pentadiene branched metabolic pathway, to construct farnesene synthesis bacterial strain.
Specific embodiment
The present invention is described in further details below in conjunction with specific embodiment.It should be understood that following embodiment is only used for The bright present invention is not for limiting the scope of the invention.
Additive amount, content and the concentration of many kinds of substance is referred to herein, wherein the percentage composition, except special instruction Outside, all refer to mass percentage.
Unlike the prior art, in order to provide a kind of high yield β-farnesene, be effectively reduced β-farnesene production cost, It is suitable for the engineering bacteria of industrial fermentation, it to be bacterium germination with the Escherichia coli of high yield isoprene that the present invention is based on metabolic engineerings, By blocking the synthesis of isoprene, and farnesyl pyrophosphate synthase IspA and β-Farmesene synthase gene of high efficient expression, obtain The genetic engineering bacterium obtained can realize the effective accumulation of β-farnesene in low-cost fermentation culture medium.Specifically, the present invention with Isoprene producing strains CIBTS1758 is bacterium germination, and introduce high efficient expression comes from Eukaryotic mevalonate pathway (MVA approach), while phosphoric acid methyl erythrite approach (MEP approach) in host cell is enhanced, it is closed for increasing β-farnesene At the supply of precursor I PP (isovaleryl pyrophosphoric acid), DMAPP (dimethylallyl pyrophosphoric acid) and FPP (farnesyl pyrophosphate), and By a large amount of screenings to positive colony bacterial strain, satisfactory bacterial strain CIBTS2509C has been obtained.
Herein, for the present invention, term " β-farnesene genetic engineering produces bacterium ", " β-farnesene genetic engineering Bacterium ", " farnesene produces bacterium ", " Escherichia coli CIBTS2509C ", " CIBTS2509C bacterial strain " indicate identical meaning, all refer to β-farnesene produces bacterium CGMCC No.16709.
Herein, term " Escherichia coli CIBTS1758 ", " bacterial strain CIBTS1758 ", " CIBTS1758 " indicate identical Meaning, all refer to as farnesene production bacterium CGMCC No.16709 building basis original strain CIBTS1758, by Shanghai The building of industrial biotechnology research and development centre and preservation, in document Synergy between methylerythritol phosphate pathway and mevalonate pathway for isoprene production in Have in Escherichia coli.Chen Yang, et al., Metabolic Engineering 37 (2016) 79-91. in detail Thin description.Bacterial strain CIBTS1758 is to be constructed and obtained, genotype BL21, glmS- based on E. coli BL21 pstS::PL*MKMM PMKSC PMDSC idiSC,Δidi::PGI*idiSC,PL**dxs,PGI*dxr。
The present invention is by entering plasmid PHGFH, PAGEs and pAKF corotation in Escherichia coli CIBTS1758, by acquisition Positive clone strain CIBTS1758/PHGFH/PAGEs/pAKF screened, be named as CIBTS2509C, it is raw to obtain farnesene Produce bacterium CGMCC No.16709.It includes gene mvaE, mvaS, mk, pmk, pmd, idi, ispA and bfs.Wherein gene mvaE, MvaS is to be transformed into host CIBTS1758 to obtain by plasmid PHGFH and PAGEs, and gene mk, pmk, pmd, idi are The mevalonate pathway related gene that host CIBTS1758 includes, gene ispA and bfs are to be transformed into host by plasmid pAKF It is obtained in CIBTS1758.
Control strain as the comparison of farnesene production capacity is by entering greatly plasmid PHGFH, PAGEs and pAK corotation The bacterial strain CIBTS1758/PHGFH/PAGEs/pAK obtained in enterobacteria CIBTS1758.Since plasmid pAKF includes and method Buddhist nun Alkene synthesizes relevant gene ispA and sequence is the bfs of SEQ ID NO:1, and plasmid pAK includes a kind of and farnesyl pyrophosphate It synthesizes relevant gene ispA but does not include bfs gene, this gene difference makes Escherichia coli CIBTS2509C's to have β- Farnesene production capacity, and control strain does not have this ability.
Embodiment
Material and method
Full genome synthesis, primer synthesis and sequencing herein is all completed by Nanjing Genscript Biotechnology Co., Ltd..
Molecular biology experiment herein include plasmid construction, digestion, competent cell preparation, conversion etc. referring especially to " Molecular Cloning:A Laboratory guide " (third edition), J. Pehanorm Brooker, D.W. Russell (beauty) write, and Huang Peitang etc. is translated, and science goes out Version society, Beijing, 2002) it carries out.For example competent cell method for transformation and competence preparation method are referring to " Molecular Cloning: A Laboratory Guide " (third edition) the 1st chapter page 96 progress.Specific experiment condition can be determined by simple experiment when necessary.
Plasmid PHGFH is provided by Shanghai Research and Development Center of Industrial Biotechnology, it includes petH, petF, ispG, ispH, is answered P15A gene in area processed.
Plasmid PAGEs is provided by Shanghai Research and Development Center of Industrial Biotechnology, it includes mvaE, mvaS, fldA, ispG, is answered System repA gene.
Plasmid pSK is provided by Shanghai Research and Development Center of Industrial Biotechnology, and it includes ispS and mvaK genes.
Plasmid pUC57-150-1 is synthesized by Nanjing Genscript Biotechnology Co., Ltd., is SEQ ID it includes sequence The bfs gene of NO:1, the sequence are the Escherichia coli Preference codon of optimization.
Escherichia coli CIBTS1758 is constructed and is provided by Shanghai Research and Development Center of Industrial Biotechnology.
Plasmid PHGFH, plasmid PAGEs and Escherichia coli CIBTS1758 are in document Synergy between methylerythritol phosphate pathway and mevalonate pathway for isoprene production in Escherichia coli.Chen Yang,et al.,Metabolic Engineering 37 It is disclosed in (2016) 79-91..
Main medium:
Seed culture medium is, for example, LB culture medium, may include 100 μ g/ml ampicillins, 34 μ g/ml chloramphenicol and 100 μ g/ml spectinomycins.Seed expand culture medium be, for example, V7S culture medium, may include 100 μ g/ml ampicillins, 34 μ g/ml chloramphenicol and 100 μ g/ml spectinomycins.Producing fermentation medium is, for example, V7E culture medium, may include 100 μ G/ml ampicillin, 34 μ g/ml chloramphenicol and 100 μ g/ml spectinomycins and 0.1mM IPTG.
The V7S culture medium composition is as follows: glucose 10g/L, yeast powder 5g/L, MOPS 0.1M/L, (NH4)2SO4 5g/ L, Na2HPO41g/L, KH2PO40.4g/L, MgSO40.5g/L, CaCl2·2H2O 0.1g/L, vitamin B1 2mg/L, 100 Times trace element solution (Citric Acid Mono 10g/L, MnSO4·7H2O 2g/L,FeSO4·7H2O 0.5g/L,ZnSO4·7H2O 0.2g/L,CuSO4·5H2O 0.05g/L,0.05g CoCl2·6H2O,Na2MoO4·2H2O 0.05g/L)。
The V7E culture medium composition is as follows: glucose 5g/L, yeast powder 1g/L, MOPS 0.1M/L, (NH4)2SO4 5g/ L, Na2HPO41g/L, KH2PO40.4g/L, MgSO40.5g/L, CaCl2·2H2O 0.1g/L, vitamin B1 2mg/L, 100 Times trace element solution (Citric Acid Mono 10g/L, MnSO4·7H2O 2g/L,FeSO4·7H2O 0.5g/L,ZnSO4·7H2O 0.2g/L,CuSO4·5H2O 0.05g/L,0.05g CoCl2·6H2O,Na2MoO4·2H2O 0.05g/L)。
Embodiment 1: the building of plasmid pAKF
Primer sequence information used in plasmid pAKF building is as shown in table 1.
Table 1, primer sequence
In table 1, "-F " in title represents forward direction;"-R " represents reversed.
1.1 using Escherichia coli MG1655 genome as template, using ispA-FG/ispAL-R2 as primer, PCR amplification ispAL Segment, about 969bp (amplification homology arm+ispA+linker).PCR condition: 95 DEG C of denaturation 5min, 95 DEG C of denaturation 30s, 58 DEG C are moved back 32 circulations, 68 DEG C of heat preservations 10min, last 16 DEG C of heat preservations 10min are arranged in fiery 30s, 68 DEG C of extension 1min.
Glue recycles ispAL segment, using ispAL segment as template, using ispA-FG/ispA-RG as primer, and PCR amplification IspALG segment, about 1004bp (amplification homology arm+ispA+linker+ homology arm).PCR condition: 95 DEG C of denaturation 5min, 95 DEG C It is denaturalized 30s, 58 DEG C of annealing 30s, 68 DEG C of extension 1min, 32 circulations, 68 DEG C of heat preservation 10min, last 16 DEG C of heat preservations are set 10min。
PSK plasmid utilizes NcoI/NruI digestion, and glue recycles about 5.4kb segment.IspALG segment using Gibson clone with Above-mentioned 5.4kb recycling segment connection.Junction fragment is transferred to bacillus coli DH 5 alpha competent cell, and it is flat to be coated on ammonia benzyl antibiotic Plate, 37 DEG C of cultures.Picking positive colony, and by positive colony sequencing, obtain plasmid pAK.IspA gene is completed for ispS base The replacement of cause.
1.2 plasmid pUC57-150-1 BamHI/HindIII digestions, the band that recycling size is 1.7kb, and through identical The plasmid pAK segment connection of digestion recycling, junction fragment is transferred to DH5 α competent cell, is coated on ammonia benzyl antibiotic plate, and 37 DEG C culture.Picking positive colony, and by positive colony sequencing, plasmid pAKF is obtained, structure is as shown in Figure 1.
The building of embodiment 2: β-farnesene producing strains
PAKF corotation in plasmid PHGFH, PAGEs, embodiment 1 is directly entered Escherichia coli using electrotransformation method by 2.1 In CIBTS1758, bacterial strain CIBTS1758/PHGFH/PAGEs/pAKF is obtained, CIBTS2509C is named as.
PAK corotation in plasmid PHGFH, PAGEs, embodiment 1 is entered Escherichia coli using electrotransformation method by 2.2 In CIBTS1758, bacterial strain CIBTS1758/PHGFH/PAGEs/pAK is obtained, as control strain.
Embodiment 3: strain fermentation produces β-farnesene
3.1 bacterial strain CIBTS2509C cultivation and fermentations
Choose CIBTS2509 single bacterium drop down onto it is grand containing 100 μ g/ml ampicillins, 34 μ g/ml chloramphenicol and 100 μ g/ml In the LB culture medium of mycin, 37 DEG C, 220rpm is incubated overnight;It is then inoculated by the inoculum concentration of 8%v/v anti-containing above-mentioned three kinds In the V7S culture medium of raw element, 37 DEG C, 220rpm continues to cultivate 8-12h;Then it is inoculated by the inoculum concentration of 8%v/v containing above-mentioned In the V7E culture medium of three kinds of antibiotic and 0.1mM IPTG, 37 DEG C, 220rpm continue cultivate 8-12h;The last of the ten Heavenly stems of 1/5 volume is added Alkane continues to cultivate 4h.12000rpm is centrifuged 10min, collects decane phase, GC-MS is sent to analyze.
The GC analysis method of farnesene is as follows: Aglient 7890A gas chromatograph, is equipped with 5975MS;Chromatographic column Agilent HP-1(30mx0.25mm,0.25μm);Sample volume: 0.5 μ l;Injector temperature: 280 DEG C, split ratio 10:1;gas saver:20ml/min;Column flow rate: 1ml/min;Carrier gas: high pure nitrogen is pressed before column: 11.724psi, Mean Speed: 26.511cm/sec;Column temperature: (1), 60 DEG C, 0min is kept;(2), 10 DEG C/min is warming up to 150 DEG C, keeps 0min;(3),30 DEG C/min, 280 DEG C are warming up to, 2min is kept.Total run time 15.33min.Detector (FID): temperature: 300 DEG C, hydrogen stream Speed: 40ml/min;Air velocity: 400ml/min;Tail blows 25ml/min;Target peak appearance time: 11.07min.
Confirm through GC-MS, target product β-farnesene yield is 250mg/L.
3.2 control strain CIBTS1758/PHGFH/PAGEs/pAK cultivation and fermentations
According to method identical with above-mentioned steps 3.1, culture hair is carried out to bacterial strain CIBTS1758/PHGFH/PAGEs/pAK Ferment, and detect β-farnesene yield.Confirm through GC-MS, control strain does not produce β-farnesene.
It is demonstrated experimentally that bacterial strain CIBTS2509C has β-farnesene production capacity, β-farnesene in fermentation liquid can be realized High concentration accumulation, have industrial applications prospect.
Sequence table
<110>Zhejiang medicine limited liability company
<120>for producing the Escherichia coli of farnesene
<130> SHPI1812281
<160> 6
<170> SIPOSequenceListing 1.0
<210> 1
<211> 1725
<212> DNA
<213>artificial sequence ()
<400> 1
atgagcaccc tgccgatcag cagcgtgagc agcagcagca gcaccagccc gattgtggtt 60
gacgataaag acagcaccaa gccggatgtt atccgtcaca ccaccaactt caacgcgagc 120
atttggggcg accagtttct gacctacgac gagccggaag atctggtgat gaagaaacaa 180
ctggttgagg aactgaaaga ggaagtgaag aaagagctga tcaccattaa aggtagcaac 240
gaaccgatgc agcacgtgaa gctgatcgag ctgattgacg cggttcaacg tctgggcatc 300
gcgtaccact tcgaggaaga gatcgaagag gcgctgcagc acattcacgt gacctatggc 360
gagcagtggg ttgataaaga aaacctgcaa agcattagcc tgtggttccg tctgctgcgt 420
cagcaaggtt ttaacgtgag cagcggcgtt ttcaaggact ttatggatga gaagggtaaa 480
tttaaggaaa gcctgtgcaa cgacgcgcag ggcatcctgg cgctgtacga agcggcgttc 540
atgcgtgtgg aggacgaaac cattctggat aacgcgctgg agtttagcaa agttcacctg 600
gatatcattg cgaaggaccc gagctgcgat agcagcctgc gtacccagat ccaccaagcg 660
ctgaagcaac cgctgcgtcg tcgtctggcg cgtatcgaag cgctgcacta catgccgatt 720
tatcagcaag agaccagcca cgacgaagtg ctgctgaaac tggcgaagct ggatttcagc 780
gttctgcaga gcatgcacaa gaaagagctg agccacatct gcaaatggtg gaaggacctg 840
gatctgcaaa acaaactgcc gttcgtgcgt gaccgtgtgg ttgaaggcta cttttggatt 900
ctgagcattt actatgagcc gcagcacgcg cgtacccgta tgtttctgat gaagagctgc 960
atgtggctgg ttgtgctgga cgataccttc gacaactacg gtacctatga agagctggag 1020
atctttaccc aagcggtgga aaaatggagc attagctgcc tggatatgct gccggaatac 1080
atgaagctga tctatcagga gctggtgaac ctgcacgttg aaatggaaga gagcctggag 1140
aaagaaggca aggcgtacca aattcactat gttaaagaga tggcgaagga actggtgcgt 1200
aactacctgg ttgaggcgcg ttggctgaaa gaaggttaca tgccgaccct ggaagagtat 1260
atgagcgtga gcatggttac cggtacctac ggcctgatga ccgcgcgtag ctatgtgggt 1320
cgtggcgaca tcgttaacga agataccttc aaatgggtta gcagctatcc gccgatcgtg 1380
aaggcgagct gcgttatcat tcgtctgatg gacgatattg tgagccacaa agaagagcag 1440
gagcgtggtc acgttgcgag cagcattgag tgctacagca aggaaagcgg cgcgagcgaa 1500
gaggaagcgt gcgaatatat cagccgtaaa gtggaagatg cgtggaaggt tattaaccgt 1560
gagagcctgc gtccgaccgc ggtgccgttc ccgctgctga tgccggcgat caacctggcg 1620
cgtatgtgcg aagtgctgta cagcgttaac gacggtttta cccacgcgga gggcgatatg 1680
aaaagctata tgaagagctt ctttgttcac ccgatggtgg tttaa 1725
<210> 2
<211> 53
<212> DNA
<213>artificial sequence ()
<400> 2
attaatgtat cgattaaata aggaggaata aaccatggac tttccgcagc aac 53
<210> 3
<211> 59
<212> DNA
<213>artificial sequence ()
<400> 3
aagcttgcgg atccgccgcc acccgagcca ccgccacctt tattacgctg gatgatgta 59
<210> 4
<211> 57
<212> DNA
<213>artificial sequence ()
<400> 4
acaggatacc atgttttttt acctccttta tgcagaagct tgcggatccg ccgccac 57
<210> 5
<211> 22
<212> DNA
<213>artificial sequence ()
<400> 5
gcattaagcg ccggagataa ag 22
<210> 6
<211> 23
<212> DNA
<213>artificial sequence ()
<400> 6
cgatcaaatc cgggtagctt tcg 23

Claims (10)

1. a kind of β-farnesene produces bacterium, it is preserved in China Committee for Culture Collection of Microorganisms's common micro-organisms center, is protected Hiding number is CGMCC No.16709.
2. a kind of construct β as described in claim 1-farnesene production bacterium method comprising following steps:
A. plasmid PHGFH is constructed, it includes petH, petF, ispG, ispH, duplicate field p15A genes;
Plasmid PAGEs is constructed, it includes mvaE, mvaS, fldA, ispG, replicon repA genes;
Plasmid pAKF is constructed, it includes the ispA of Escherichia coli, the mvaK in geneva sarcina methanica source, sequences to be Bfs, the replicon ColE1 gene of SEQ ID NO:1;
B. plasmid PHGFH, PAGEs and pAKF corotation constructed in step A will be entered in Escherichia coli, is obtained comprising gene The positive colony of mvaE, mvaS, mk, pmk, pmd, idi, ispA and bfs;
C. from positive colony constructed in step B, production β-farnesene bacterial strain is filtered out.
3. β as described in claim 1-farnesene production bacterium is for producing the application of β-farnesene.
4. application as claimed in claim 3, which is characterized in that produce the hair of bacterium by β as described in claim 1-farnesene Ferment produces β-farnesene.
5. application as claimed in claim 4, which is characterized in that fermentation includes seed growth phase and thallus fermentation stage.
6. application as claimed in claim 5, which is characterized in that seed culture medium, thallus fermentation medium be not identical.
7. application as claimed in claim 6, which is characterized in that fermentation medium composition is as follows: glucose 5g/L, yeast powder 1g/L, MOPS 0.1M/L, (NH4)2SO45g/L, Na2HPO41g/L, KH2PO40.4g/L, MgSO40.5g/L, CaCl2· 2H2O 0.1g/L, vitamin B1 2mg/L, 100 times of trace element solutions;The wherein trace element solution composition an are as follows: water Citric acid 10g/L, MnSO4·7H2O 2g/L,FeSO4·7H2O 0.5g/L,ZnSO4·7H2O 0.2g/L,CuSO4·5H2O 0.05g/L,0.05g CoCl2·6H2O,Na2MoO4·2H2O 0.05g/L。
8. application as claimed in claim 6, which is characterized in that separately include 100 in seed culture medium, thallus fermentation medium μ g/ml ampicillin, 34 μ g/ml chloramphenicol and 100 μ g/ml spectinomycins.
9. application as claimed in claim 6, which is characterized in that include 0.1mM IPTG in thallus fermentation medium.
10. application as claimed in claim 5, which is characterized in that fermentation temperature is 37 DEG C.
CN201811596736.4A 2018-12-26 2018-12-26 Escherichia coli for producing farnesene Active CN109609424B (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CN201811596736.4A CN109609424B (en) 2018-12-26 2018-12-26 Escherichia coli for producing farnesene

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN201811596736.4A CN109609424B (en) 2018-12-26 2018-12-26 Escherichia coli for producing farnesene

Publications (2)

Publication Number Publication Date
CN109609424A true CN109609424A (en) 2019-04-12
CN109609424B CN109609424B (en) 2020-07-31

Family

ID=66011557

Family Applications (1)

Application Number Title Priority Date Filing Date
CN201811596736.4A Active CN109609424B (en) 2018-12-26 2018-12-26 Escherichia coli for producing farnesene

Country Status (1)

Country Link
CN (1) CN109609424B (en)

Cited By (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN109722403A (en) * 2017-10-30 2019-05-07 中国石油化工股份有限公司 A kind of engineered strain and method preparing farnesene using cellulose
CN110408609A (en) * 2019-08-12 2019-11-05 山东泓达生物科技有限公司 A kind of compound mutation breeding method of high yield β-farnesene mutant strain
CN111607545A (en) * 2020-04-30 2020-09-01 中国科学院青岛生物能源与过程研究所 Recombinant bacterium for high-yield farnesene as well as construction method and application thereof
CN111607546A (en) * 2020-04-30 2020-09-01 中国科学院青岛生物能源与过程研究所 Genetically engineered bacterium for high-yield farnesene and construction method and application thereof

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2012088450A1 (en) * 2010-12-22 2012-06-28 Danisco Us Inc. Biological production of pentose sugars using recombinant cells
CN102753697A (en) * 2009-06-17 2012-10-24 丹尼斯科美国公司 Improved isoprene production using the dxp and mva pathway
CN103243065A (en) * 2013-05-30 2013-08-14 武汉大学 Bacterial strain for producing farnesene and application of bacterial strain

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102753697A (en) * 2009-06-17 2012-10-24 丹尼斯科美国公司 Improved isoprene production using the dxp and mva pathway
WO2012088450A1 (en) * 2010-12-22 2012-06-28 Danisco Us Inc. Biological production of pentose sugars using recombinant cells
CN103243065A (en) * 2013-05-30 2013-08-14 武汉大学 Bacterial strain for producing farnesene and application of bacterial strain

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
CHEN YANG 等: "Synergy between methylerythritol phosphate pathway and mevalonate pathway for isoprene productionin Escherichia coli", 《METABOLIC ENGINEERING》 *
FAYIN ZHU, ET AL: "In Vitro Reconstitution of Mevalonate Pathway and Targeted Engineering of Farnesene Overproduction in Escherichia coli", 《BIOTECHONOLOGY AND BIOENGINEERING》 *

Cited By (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN109722403A (en) * 2017-10-30 2019-05-07 中国石油化工股份有限公司 A kind of engineered strain and method preparing farnesene using cellulose
CN109722403B (en) * 2017-10-30 2020-12-04 中国石油化工股份有限公司 Engineering strain and method for preparing farnesene by using cellulose
CN110408609A (en) * 2019-08-12 2019-11-05 山东泓达生物科技有限公司 A kind of compound mutation breeding method of high yield β-farnesene mutant strain
CN111607545A (en) * 2020-04-30 2020-09-01 中国科学院青岛生物能源与过程研究所 Recombinant bacterium for high-yield farnesene as well as construction method and application thereof
CN111607546A (en) * 2020-04-30 2020-09-01 中国科学院青岛生物能源与过程研究所 Genetically engineered bacterium for high-yield farnesene and construction method and application thereof
CN111607545B (en) * 2020-04-30 2022-08-09 中国科学院青岛生物能源与过程研究所 Recombinant bacterium for high-yield farnesene as well as construction method and application thereof
CN111607546B (en) * 2020-04-30 2022-08-09 中国科学院青岛生物能源与过程研究所 Genetic engineering bacterium for high-yield farnesene and construction method and application thereof

Also Published As

Publication number Publication date
CN109609424B (en) 2020-07-31

Similar Documents

Publication Publication Date Title
CN109609424A (en) For producing the Escherichia coli of farnesene
BRPI0713105A2 (en) method to produce an isoprenoid, and, host cell
CN103243066B (en) Bacterial strain for producing lycopene and application of bacterial strain
US9580728B2 (en) Methods for isoprene and pinene production in cyanobacteria
CN103898037B (en) A kind of coproduction geraniol and the genetic engineering bacterium and its construction method of nerol and application
CN103243065A (en) Bacterial strain for producing farnesene and application of bacterial strain
CN104846000B (en) Using glucose production to the recombination bacillus coli and purposes of hydroxy-benzyl alcohol or Gastrodin
CN106032538B (en) One plant of metabolic engineering bacteria and its application in utilization a variety of substrates production vanillic aldehyde
CN103215315A (en) Method for producing isoprene by utilizing blue algae
CN108949706A (en) A kind of L-PROLINE -4- hydroxylase and its genetic engineering bacterium, construction method and application
CN109988722A (en) A kind of method of recombinant Saccharomyces cerevisiae bacterial strain and its application and production tyrosol and/or rhodioside
CN107119001B (en) The production method of genetically engineered hydrogenlike silicon ion and preparation method thereof and farnesol
CN111286482A (en) Escherichia coli engineering bacterium capable of rapidly producing geraniol and construction method and application thereof
CN110029069B (en) Saccharopolyspora sinensis engineering strain with light flavomycin gene cluster knocked out and application thereof
CN104789512B (en) The production bacterium of isoprene and the method for producing isoprene
CN101748069A (en) recombinant blue-green algae
CN104762242B (en) The production bacterium of mevalonic acid and the method for producing mevalonic acid
CN101338291A (en) Method for preparing coronatine and special strain thereof
KR101839996B1 (en) Method for mass production of sesquiterpene from Polyporus brumalis
CN111154665A (en) Recombinant yarrowia lipolytica and construction method and application thereof
CN113621633B (en) Mangifera indica terpene synthase gene TPS1 and application thereof
CN109486695A (en) For producing the Yarrowia lipolytica of farnesene
KR20210047992A (en) Transformed methanotrophs for producing a-humulene production from methane and uses thereof
CN109097374A (en) A kind of preparation method, bacterial strain and its application of pseudomonas aeruginosa engineered strain
CN109852600A (en) A kind of calyculus tongue fur sesquiterpene synthase MTb and its gene order

Legal Events

Date Code Title Description
PB01 Publication
PB01 Publication
SE01 Entry into force of request for substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant