CN108728369B - Withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction method - Google Patents

Withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction method Download PDF

Info

Publication number
CN108728369B
CN108728369B CN201810526655.0A CN201810526655A CN108728369B CN 108728369 B CN108728369 B CN 108728369B CN 201810526655 A CN201810526655 A CN 201810526655A CN 108728369 B CN108728369 B CN 108728369B
Authority
CN
China
Prior art keywords
fondcl1
seq
hyg
leu
fon1dcl1
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
CN201810526655.0A
Other languages
Chinese (zh)
Other versions
CN108728369A (en
Inventor
曾凡云
彭军
漆艳香
丁兆健
谢艺贤
张欣
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
CATAS Environment and Plant Protection Institute
Original Assignee
CATAS Environment and Plant Protection Institute
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by CATAS Environment and Plant Protection Institute filed Critical CATAS Environment and Plant Protection Institute
Priority to CN201810526655.0A priority Critical patent/CN108728369B/en
Publication of CN108728369A publication Critical patent/CN108728369A/en
Application granted granted Critical
Publication of CN108728369B publication Critical patent/CN108728369B/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/16Hydrolases (3) acting on ester bonds (3.1)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y301/00Hydrolases acting on ester bonds (3.1)
    • C12Y301/26Endoribonucleases producing 5'-phosphomonoesters (3.1.26)
    • C12Y301/26003Ribonuclease III (3.1.26.3)

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Genetics & Genomics (AREA)
  • Wood Science & Technology (AREA)
  • General Health & Medical Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Biomedical Technology (AREA)
  • Medicinal Chemistry (AREA)
  • Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)

Abstract

The invention discloses a kind of withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction methods.The present invention is according to 1 protein sequence of Dicer like having been reported, homologous comparison Fon genome sequence, obtain withered germ of water-melon FonDCL1 gene, using homogenotization principle, utilize Split-marker strategy, target gene FonDCL1 is replaced with hygromycin B (HPH) gene DNA fragment, by constructing the homologous recombination segment, the deletion mutant body of FonDCL1 is obtained with wild strain Fon1 genetic transformation, the FonDCL1 mutant has to the enhancing of watermelon seedlings pathogenicity, to Monensin sodium, hydroxycarbamide, fluorescent whitening agent CFW, the characteristics such as the abiotic stress factor such as Congo red CR and hydrogen peroxide is more sensitive, this participates in own growth and development for Fon1 and infects what watermelon generated in the process The function parsing of tiny RNA provides Research foundation.

Description

Withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its building Method
Technical field
The present invention relates to a kind of withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction method, Belong to technical field of bioengineering.
Background technique
Watermelon blight is invaded by Fusarium oxysporum f. sp. niveum (Fusarium oxysporum f.sp.niveum) Watermelon fibrovascular system disease caused by contaminating, cause of disease mainly passes through root wound or the intrusion of root hair apical cell gap, in host It after tube wall iuntercellular and Intracellular growth, into vascular bundle, decomposes and destroys cell, make to accumulate pectic substance in conduit, blocking Conduit influences Water Transportation, and then plant is caused to be wilted.
Watermelon blight can fall ill from seedling to strain, and it is most heavy to expand late onset with seat melon phase and melon.Seedling is aggrieved, Can be caused before emergence rotten kind be unearthed after fall ill, cotyledon, true leaf in dehydration shape wilt, basal part of stem browning shrink in it is broken fall shape, extraction The visible root yellowish-brown of young plant is rotted.Adult plant is aggrieved, and initial stage diseased plant lower blade dehydration is wilted, the upward chlorisis of vines base portion. Later period disease portion is in sepia, is felt like jelly, normal lobe, has gluey red material to overflow.When diseased plant base portion humidity, it is covered with white to pink Color mustiness cause of disease conidium, section view basal part of stem to root, it is seen that vascular bundle flavescence brown.
So far, oneself discovery watermelon blight has a biological strain, i.e. biological strain 0,1,2 and 3, and China is with biological strain 1 It is dominant.In agricultural production, for wilt disease type Fusarium oxysporum in addition to endangering watermelon, host range is extensive, can cause more than 100 kinds Plant vasular beam wilting disease, such as Flos Carthami, sugarcane, sesame, dwarf banana, pineapple and melon and beans various plants, especially There is serious harm effect to cucurbitaceous plant, banana, tomato and cotton grade high economic value crop.
There is generation in cultivating watermelon area to watermelon blight throughout our country, which can cause the yield of watermelon to decline, even Total crop failure.Cultivating watermelon especially protects ground area to expand rapidly in recent years, and continuous cropping continuous cropping area increases, and protecting field high temperature and humidity is made It is more and more common at watermelon blight, it is increasingly severe, huge economic losses are caused to watermelon industry.
MiRNA (microRNA) is that one kind is about 22nt, the endogenous non-coding tiny RNA with adjusting function.MiRNA ginseng With important physiology and pathologic process many in body, such as the growth and development of body, the generation and immune response of tumour, this makes Obtain its focus for becoming biological study.Dicer albumen is a member important in III family of RNase, to miRNA or siRNA Generation play a crucial role.Dicer albumen is usually by 1 DEXH box or H box, 1 DUF283 structural domain, 1 A PAZ structural domain, 2 III structural domains of RNase (III b of RNase III a and RNase) and 1 dsRNA binding structural domain composition. The molecular structure of Dicer albumen determines that it is played an important role in miRNAs synthesis.
Pre-miRNA can be degraded into specific length by Dicer, usually the short dsRNA segment of 21-25nt.Dicer is first First then the structure of " molecular ruler " is utilized to exist in conjunction with the PAZ structural domain of its own 3 ' the end dinucleotides of pre-miRNA Pre-miRNA is cut fixed position, and the 5 ' ends of miRNA are formed, and Dicer needs Mg to the mechanism of pre-miRNA2+, But do not combine Mg2+, catalytic activity shows that electrostatic substrate-enzyme interacting is to the function of Dicer to ionic strength sensitive It is very important.
In arabidopsis, when by virus infection, DCL4 is the first line of defence that Dicer resists virus in arabidopsis, DCL4 can produce tiny RNA and resist virus.When DCL4 cannot be played and be resisted activity, DCL2 can become Dicer and resist disease The second defence line of poison.In the deletion mutant of the Osdcl1 of rice, the quantity of miRNA can be reduced largely, can final shadow The development of Xiangshui County rice shows that OsDcr1 is related with the process of rice miRNA, is sent out by miRNA come the growth of adjusting and controlling rice It educates.DCL1 is related with the cutting of miRNA and the generation of miRISC compound in drosophila.
Germline stem cell and mature stem cells can be generated normally in normal drosophila, and in drosophila Dcr1 mutant Ovary stem cell is just dead early stage development, this has also indicated that the miRNA that Dcr1 is generated can regulate and control the life of drosophila Life activity.However the mouse as mammal Typical Representative, the missing of Dicer gene deposit it all cannot in embryo stage It is living.
In Neuraspora crassa, the double-mutant of DCL-1 and DCL-2 cannot be processed into dsRNA the siRNA of 25nt, but It is that dsRNA can be processed into siRNA by each single mutant and original strain, this has turned out the function between two Dicer Complementation with intersect.Dicer albumen sms-3 in Neuraspora crassa participates in the sexual reproduction of neurospora.Sms-3 mutant The shell of ascus mature can also can produce the ascospores of a large amount of maturations simultaneously, but the hair with the shell of ascus of original strain compared with It is white.Necessary element during CaAgo1 and CaDcr1 is the gene silencing of RNAi initiation in Candida albicans, simultaneously CaDCR1 can seriously affect the growth of itself.
Currently, people use prevention and treatment of various measures reinforcement to watermelon blight, such as graft seedling growth, breeding for disease resistance, change Prevention and treatment etc. is learned, but its effect all has certain limitation, also causes certain negative effect, graft seedling growth is to watermelon maturation There are important influence, the shortage of breeding for disease resistance long periodicity and its antigen in phase, quality, and chemical prevention is largely brought using pesticide The negative effect such as environmental pollution, ecological disruption and disease drug resistance.Dicer like as the Main Components in RNAi access, It plays an important role in the generation regulation process of miRNA.Specify they and growth and pathogenic relationship, it will help we are from another One angle illustrates the pathogenesis of withered germ of water-melon.
Summary of the invention
The present invention compares sharp spore sickle according to 1 protein sequence of Dicer like in Fusarium oxysporum tomato specialized form Fol Knife bacterium watermelon specialized form genomic DNA, finds homologous sequence FonDCL1, is turned by the building and heredity of the genetic recombination segment Change and obtains FonDCL1 deletion mutant body.
The technical solution adopted by the present invention is as follows:
A kind of withered germ of water-melon RNAi component gene FonDCL1, the nucleosides comprising its upstream and downstream 3Kb nucleotide sequence Acid sequence is as shown in SEQ ID NO:1.
The nucleotide sequence replaced with hygromycin gene HPH is as shown in SEQ ID NO:2.
The cDNA of withered germ of water-melon RNAi component gene FonDCL1 coding of the present invention, with shown in SEQ ID NO:3 Nucleotide sequence.
The protein of withered germ of water-melon RNAi component gene FonDCL1 expression of the present invention, with SEQ ID NO:4 institute The amino acid sequence shown.
The present invention also provides a kind of withered germ of water-melon FonDCL1 deletion mutant body, which passes through following Method obtains:
1) FonDCL1 gene delection recombinant dna fragment constructs
First round PCR amplification: using watermelon blight genomic DNA as template, primers F on1DCL1-LBCK/Fon1DCL1- HPH-LB-R expands FonDCL1 upstream region of gene FonDCL1-UP segment, primers F on1DCL1-HPH-RB-F/Fon1DCL1-RBCK Expand FonDCL1 downstream of gene FonDCL1-DOWN segment;Using carrier pCT74 Plasmid DNA as template, primer HYG-F/HYG-R Expand resistant gene HYG segment;
Second wheel PCR amplification: using FonDCL1-UP and HYG as template, primers F on1DCL1-LB-F/HYG-R1 amplification FonDCL1-UP+HY segment, using FonDCL1-DOWN and HYG as template, primer HYG-F1/Fon1DCL1-RB-R expands YG+ FonDCL1-DOWN segment;
3) protoplast and FonDCL1-UP+HY segment and YG+FonDCL1-DOWN segment equal proportion are mixed, is carried out FonDCL1 gene delection genetic transformation obtains mutant;
Described primers F on1DCL1-LBCK, Fon1DCL1-HPH-LB-R, Fon1DCL1-HPH-RB-F, Fon1DCL1- The nucleotide sequence of RBCK, HYG-F, HYG-R, Fon1DCL1-LB-F, HYG-R1, HYG-F1, Fon1DCL1-RB-R are successively such as SEQ ID NO:5、SEQ ID NO:6、SEQ ID NO:7、SEQ ID NO:8、SEQ ID NO:9、SEQ ID NO:10、SEQ ID NO:11, SEQ ID NO:12, SEQ ID NO:13, shown in SEQ ID NO:14.
The FonDCL1 deletion mutant body is identified by the following method:
Using the genomic DNA of transformant as template, designs four pairs of primers and is used to identify FonDCL1 deletion mutant body, It is upstream primer Fon1DCL1-LBCK/HPT-LBCK, downstream primer Fon1DCL1-RBCK/HPT-RBCK, for expanding respectively Primer HYG-F/HYG-R, the FonDCL1 gene internal primers F on1DCL1-2193/Fon1DCL1-3030 of HPH gene;
The nucleotide sequence of described primer HPT-LBCK, HPT-RBCK, Fon1DCL1-2193, Fon1DCL1-3030 are successively As shown in SEQ ID NO:15, SEQ ID NO:16, SEQ ID NO:17, SEQ ID NO:18.
Compared with prior art, the beneficial effects of the present invention are:
The present invention provides FonDCL1 deletion mutant body and its construction method, which has to west Melon seedling pathogenicity weakens, to abiotic sides of body such as Monensin sodium, hydroxycarbamide, fluorescent whitening agent CFW, Congo red CR and hydrogen peroxide The characteristics such as the urgent factor is more sensitive, this participates in own growth and development for Fon1 and infects the function of the tiny RNA generated during watermelon It can parsing offer Research foundation.
Detailed description of the invention
Fig. 1 is building schematic diagram and the positive transformant PCR identification of FonDCL1 gene delection recombinant fragment;Wherein, Fig. 1- A is that FonDCL1 gene and upstream and downstream substrate section, resistant maker gene HPH are divided into two parts, respectively with FonDCL1 gene Upstream and downstream about 2Kb carries out fusion DNA vaccine amplification, and arrow is that four couples of PCR identify primer;Fig. 1-B is after four pairs of primers carry out PCR amplification Electrophoresis detection;
Fig. 2 is FonDCL1 deletion mutant body Pathogenic Tests;Wherein, Fig. 2-A is that watermelon seedlings carry out hurting root processing Afterwards, 14d morbidity result after inoculating spores suspension;Fig. 2-B is the disease index of FonDCL1 deletion mutant body morbidity;
Fig. 3 is that the speed of growth of FonDCL1 deletion mutant body measures;Wherein, Fig. 3-A is to cultivate 7d on PDA plate Afterwards, FonDCL1 deletion mutant body colonial morphology;Fig. 3-B is that the colony diameter of FonDCL1 deletion mutant body measures;
Fig. 4 is that the sporulation quantity of FonDCL1 deletion mutant body measures;
Fig. 5 is the abiotic stress sensitivity testing of FonDCL1 deletion mutant body.
Specific embodiment
Below by specific embodiment combination attached drawing, invention is further described in detail.
Experimental method used in the embodiment of the present invention is conventional method unless otherwise specified.
Material used in the embodiment of the present invention, reagent etc., are commercially available unless otherwise specified.
Embodiment one: the acquisition of withered germ of water-melon FonDCL1 deletion mutant body
1, FonDCL1 gene delection recombinant dna fragment constructs
Withered germ of water-melon FonDCL1 gene knockout uses the principle of homologous replacement, with resistant gene hygromycin B (HPH) The sequence of the DNA fragmentation of gene DNA fragment replacement target gene FonDCL1, FonDCL1 and upstream and downstream 3kb are SEQ ID NO:1, displaced FonDCL1 gene order are SEQ ID NO:2.
1) design of primers of FonDCL1 gene delection recombinant dna fragment
Using the HPH gene with promoter and the 1.4Kb of terminator as template, first round PCR amplification, designed for amplification The primer HYG-F/HYG-R of the HYG genetic fragment of 1.4Kb, for expanding the primer of the upstream FonDCL1 2Kb genetic fragment Fon1DCL1-LBCK/Fon1DCL1-HPH-LB-R, for expanding the primers F on1DCL1- of the downstream FonDCL1 2Kb genetic fragment HPH-RB-F/Fon1DCL1-RBCK;
Second wheel PCR amplification, design primer Fon1DCL1-LB-F/HYG-R1, for expanding the upstream portion 1.5Kb and HYG Sub-sequence HY, primer HYG-F1/Fon1DCL1-RB-R, for expanding HYG partial sequence YG and downstream 1.5Kb sequence;For The PCR of positive transformant is verified, the aligning primer of HPT-LBCK/HPT-RBCK and FonDCL1 gene replacement part Fon1DCL1-2193/Fon1DCL1-3030。
1 primer sequence of table
2) PCR amplification of FonDCL1 gene delection recombinant dna fragment
First round PCR amplification:
Using Fon1 genomic DNA as template, primers F on1DCL1-LBCK/Fon1DCL1-HPH-LB-R amplification gene upstream FonDCL1-UP segment (1808bp);Primers F on1DCL1-HPH-RB-F/Fon1DCL1-RBCK amplification gene downstream FonDCL1-DOWN segment (1947bp), using carrier pCT74 Plasmid DNA as template, primer HYG-F/HYG-R expands 1376bp's HYG segment.
PCR response procedures: 95 DEG C, 4min, 1cycle;94 DEG C, 40s, 58 DEG C, 40s, 72 DEG C, 1min 30s, 32cycles;72 DEG C, 10min, 1cycle;16 DEG C, hold.
Second wheel PCR amplification:
Expanded using LA Taq, will first round PCR product dilute 100 times after be used as template, with FonDCL1-UP and HYG is template, and primers F on1DCL1-LB-F/HYG-R1 expands FonDCL1-UP+HY segment (2570bp), with FonDCL1- DOWN and HYG is template, and primer HYG-F1/Fon1DCL1-RB-R expands YG+FonDCL1-DOWN segment (2259bp).
PCR response procedures: 95 DEG C, 4min, 1cycle;94 DEG C, 40s, 58 DEG C, 1min20s, 72 DEG C, 2min 30s, 32cycles;72 DEG C, 10min, 1cycle;16 DEG C, hold.
2, the protoplast transformation that PEG is mediated
1) prepared by protoplast
5-10 block Fon1 mycelia block (culture 7-10d, size 5mm) is taken, is added in the PDB of 100ml, 28 DEG C, 150rpm Shake training 4-5d.3 layers of lens wiping paper filtering, collect the conidium in filtrate.5-10ml conidium liquid is taken, the PDB of 200ml is added In, 28 DEG C, 150rpm shakes training 12-18h.Cultured bacterium solution is passed through into 4 layers of filtered through gauze, appropriate 0.7M NaCl (8.18g NaCl uses H2O is settled to 200ml) solution flushing, fresh and tender mycelia is collected, mycelia is transferred in 50ml centrifuge tube.8-10ml is added (storing liquid concentration is 20mg/ml, working concentration 10mg/ml to enzymolysis liquid, is dissolved after weighing driselase with 0.7M NaCl, fixed Hold).It is vortexed, so that thallus is scattered and come into full contact with enzymolysis liquid, 30 DEG C, 80-100rpm, warm bath 3-4h.After enzymatic hydrolysis, it is added 0.7M NaCl to 50ml centrifuge tube dilutes enzymolysis liquid, and three layers of lens wiping paper filtering, is rinsed with appropriate 0.7M NaCl after being mixed by inversion Filter paper;4 DEG C, protoplast is collected after being centrifuged 15min no more than 5000rpm.With STC (the 21.86g sorbierite of 10-20ml; The 1M Tris-HCl pH 7.5 of 1.0ml;0.735g CaCl2·2H2O adds H2O is settled to 100ml) precipitating is sufficiently dissolved, 4500rpm 15min centrifugation, abandons supernatant.General 400 μ l STC is added and sufficiently dissolves precipitating, the amount of STC is determined according to the amount of precipitating It is fixed, guarantee that the concentration of protoplast can reach 108A/ml, places it in the centrifuge tube of 1.5ml.
2) protoplast transformation
Protoplast is dispensed, guarantees sterile working.By protoplast (general 200 μ l) and FonDCL1-UP+HY segment (100 μ l) and YG+FonDCL1-DOWN segment (100 μ l) mix (gently revolving) in 1.5ml centrifuge tube, are put in 1- on ice 2h.It carries out on ice, the liquid in small centrifuge tube is transferred in the centrifuge tube of tip and (indicates accurate calibration 50ml's), is added dropwise 400 μ l PEG (the 1M Tris-HCl pH 7.5 of 30g PEG4000,0.5ml, 0.735g CaCl2·2H2O adds H2O is settled to 50ml), it closes the lid and gently revolves, ice bath 15min.800 μ l PEG are added (to be added dropwise, this step can not carry out on ice, room Temperature), it gently revolves, mixes, after room temperature sets 20min.2ml RB is added.In 28 DEG C of incubators cultivate 12h after, tip from RA culture medium (glucose 10g is added in heart pipe;KCl 0.52g;MgSO4·7H2O 0.52g;KH2PO40.25g;Sorbierite 218.5g(1.2M);NaNO36g;1% agar), it is settled to 50ml, divides and changes into 5 culture dishes.It is cultivated in 28 DEG C of incubators After for 24 hours, one layer of PDA (containing hygromycin) is covered as screening in media surface, hygromycin content at least needs 50 μ g/ml, sets It is cultivated in incubator.
3) FonDCL1 deletion mutant body is identified
Using the genomic DNA of transformant as template, using four pairs of primers for identifying FonDCL1 deletion mutant body, It is upstream primer combination Fon1DCL1-LBCK/HPT-LBCK respectively, downstream primer combines Fon1DCL1-RBCK/HPT-RBCK, Primer HYG-F/HYG-R expands HPH gene, FonDCL1 gene internal primers F on1DCL1-2193/Fon1DCL1-3030. As shown if figure 1-b, the upstream and downstream primer combination of FonDCL1 deletion mutant body amplifies product and says PCR amplification result Bright transformant upstream and downstream sequence is replaced, and gene internal primer, which fails to amplify band, illustrates that FonDCL1 is replaced with HYG Change (Fig. 1-B).
The analysis of two: FonDCL1 deletion mutant body function of embodiment
1, FonDCL1 deletion mutant Pathogenic Tests
1) the FonDCL1 deletion mutant for taking culture 7d, is beaten with 5mm punch and takes 3 pieces of mycelia block, the PDB of 200ml is added In culture medium, 28 DEG C, 150rpm shakes training 3d, and 3 layers of lens wiping paper filtering collect conidium liquid, 5000rpm is centrifuged 10min, with nothing Bacterium water adjusts spore suspension concentration to 2 × 106A/ml.
2) watermelon seed is taken, with 0.1% sodium hypochlorite in 28 DEG C of immersion 6-12h, cleans 3-5 with gauze package watermelon seed It is secondary, watermelon seed is evenly laid out on wet towel, vernalization 2d under 28 DEG C of dark conditions.The seed of bud will have been urged to be seeded in In nutritive cube (15 × 15cm) containing Nutrition Soils such as coco brans, 10 watermelon seeds of each nutritive cube, at 25 DEG C, Routine Management, After 7d, grow up to the watermelon seedlings of two leaves wholeheartedly, it is spare.
3) the watermelon seedlings dissection knife wound root processing by two leaves wholeheartedly, it is then that the spore suspension of 20ml is equal from root from hurting Even addition, at 25 DEG C, normal water and fertilizer management after 2d meets 3d, 5d, 7d and 14d after bacterium, records incidence, and calculate the state of an illness and refer to Number.
Watermelon seedlings Disease investigation is according to following diseased plant grade scale:
0 grade: without illness;
1 grade: 1 or 2 cotyledons slightly turn to be yellow, but grow normal;
There is necrotic plaque in 2 grades: 1-2 piece cotyledon yellow or 1 cotyledon, and true leaf slightly turns yellow, slightly here withers;
3 grades: cotyledon is withered, and here true leaf obviously withers, and plant strain growth is obstructed, few to downgrade;
4 grades: here complete stool seriously withers, and blade is withered and yellow;
5 grades: whole strain is withered, or even lodging.
Disease index calculation formula:
Disease index=Σ (sick grade strain number × represent numerical value)/(strain number summation × morbidity most heavy duty representative numerical value) × 100%
Pathogenic Tests result such as Fig. 2-A: negative control (water process), in the case where not being inoculated with wilt, watermelon children Seedling robust growth, does not have wilt disease.Positive control, is inoculated with wild strain Fon1, and watermelon shows apparent wilt disease Symptom is inoculated with FonDCL1 mutant strain, and watermelon seedlings morbidity is caused harm serious, and calculating its disease index is 92.3, is significantly higher than The 70.2 of wild strain Fon1 show that FonDCL1 mutant strain pathogenicity enhances (Fig. 2-B).
2, the FonDCL1 deletion mutant speed of growth measures
The FonDCL1 deletion mutant (Fig. 3-A) for taking culture 7d, is beaten with 5mm punch and takes mycelia block, and it is flat to be inoculated in PDA Culture 7d is inverted in plate (Φ=60mm), in 28 DEG C, 2d, 3d, 4d, 5d measure colony diameter after inoculation, measure its life Long speed.As a result as shown in Fig. 3-B, FonDCL1 deletion mutant covers with entire plate after being inoculated with 5d, and colony diameter reaches 5.1cm, and wild strain colony diameter is 4.6cm, the mutant speed of growth and wild strain Fon1 are without marked difference.
3, FonDCL1 deletion mutant sporulation quantity measures
The FonDCL1 deletion mutant for taking culture 7d, is beaten with 5mm punch and takes 3 pieces of mycelia block, and the PDB training of 200ml is added It supports in base, 28 DEG C, 150rpm shakes training 3d, takes 1ml spore suspension blood counting chamber to calculate spore concentration, and be converted into logarithm Value, statistical result showed, FonDCL1 deletion mutant can generate 10 with wild strain Fon1 after shaking training 3d7A/ml's Spore, after Analysis of variance, FonDCL1 deletion mutant sporulation quantity and Fon1 show FonDCL1's without marked difference (Fig. 4) Missing does not influence the spore output of Fon1.
4, FonDCL1 deletion mutant abiotic stress sensitivity testing
By shake training 3d FonDCL1 deletion mutant spore suspension respectively with sterile water adjust spore concentration most 2 × 107、2×106、2×105、2×104A/ml is dispensed into the sterile EP tube of 1.5ml, and 4 DEG C save backup.
Basic MM culture medium is prepared, MM culture medium is separately added into the abiotic stress factor, is adjusted to concentration are as follows: 0.1M MgCl2、0.5M CaCl2, 1.0M sorbierite (Sorbitol), 1.0M KCl, 1.0M glucose (Glucose), 0.7M NaCl, 0.05% (W/V) Monensin sodium (MMS), 1.0mg/ml hydroxycarbamide (Hydroxyurea), 6.0mg/ml histidine (Histidine), 400 μ g/ml fluorescent whitening agents (CFW), 200 μ g/ml Congo red (CR), 0.01% (W/V) SDS, 1.0 μM H2O2, it is made into MM plate (Φ=15cm), is uniformly crossed into the small lattice of 1.5 × 1.5cm in MM flat plate bottom, it is spare.
2.0 μ l are taken to be added drop-wise in the small lattice of MM plate respectively the spore suspension of gradient concentration, 2d is cultivated in 28 DEG C of inversions, is clapped According to the abiotic stress sensibility of observation FonDCL1 deletion mutant.As a result as shown in figure 5, Protein transport inhibitor can not be mould The FonDCL1 deletion mutant of plain sodium processing, growth are suppressed.Another hydroxycarbamide (hydroxyurea, HU), hydroxyl Urea can inhibit ribonucleotide reductase, prevent cytidine monophosphate from being changed into deoxycytidylic acid, to inhibit the synthesis of DNA, it can be selective Ground acts on S phase cell.After hydroxycarbamide is handled, the growth of FonDCL1 deletion mutant is significantly inhibited.By fluorescent brightening After the relevant stress factors processing of the cell wall integrities such as agent CFW and Congo red CR, FonDCL1 deletion mutant is more sensitive. After dioxygen water process, FonDCL1 deletion mutant is more sensitive.And other abiotic stress factor (metal ions, infiltration Gesture, detergent etc.) it does not make significant difference to FonDCL1 deletion mutant.
The above content is specific embodiment is combined, further detailed description of the invention, and it cannot be said that this hair Bright specific implementation is only limited to these instructions.For those of ordinary skill in the art to which the present invention belongs, it is not taking off Under the premise of from present inventive concept, a number of simple deductions or replacements can also be made.
Sequence table
<110>Research Institute of Environment and Plant Protection, Chinese Academy of Tropi
<120>withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction method
<160> 18
<170> SIPOSequenceListing 1.0
<210> 1
<211> 10733
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 1
ccttctgtaa cgcctcctga agcgccactt tgtctcgttg ttgagcctcc ttgtgggcag 60
aaagccgctt tggtggtttg gcgacacgct tggggctccg ctttggcttc cctttggcgg 120
cagcccggga cttcttgggc cgggatgcct cgttgagctc aggagtgaca cactttaggg 180
catcattcgc ggccacttcg gcatcaaaag cgaattgagg acccggggtc tggggctttg 240
tgccctcagt aataagagga gagggcccaa tgtcagaggc agggccagtc acttgccctt 300
ctttgcccat gggtagttga tcctgaggaa ccaagttact ttcctcaggg atggctggtt 360
ccagcacctc cgaaggaaca ggaacgggaa aagccagggt catgttgaca ctgacattgg 420
gggagggggg aggggatggg ggtgaacccc aaagagtttc atcctcggga ctatcacccg 480
acgagtcagg attttgctca gtttgcttag ccagatcaag aatctcccga agaggctcga 540
acgcattcca ccagtgctca ttttccatct caagatcgat ggctgaagaa ggtgtaagtg 600
taggtggagg tgtcgacatc ttgctaaatt gaaacaagga atgacacttg ggtataagta 660
gaaaagaaaa aaggttgaaa gtgtcttggt cgtcaggtaa tactcaggag aagttgttca 720
agttgtaata caattgtcag tatcgaagtg atgtctgaaa gagtagagag atgaacttga 780
agatattaag gggaagaata agagactgtc gagaaggggg acacagggat atttataggc 840
agaattgaag actgtcttag aacaatgccc tatattcatt cagttgtagc cctgtgatag 900
tgttttatga tttcacgctt gagtctattg atttgagtca ttgatgatag aaatggaggc 960
acatggatgg caaaaaccta cgatatcact gcattgttcc aataacatca agaaactatt 1020
tcacgcagaa ctctctttct tttgcccctt aggtgaagag taaacaacac agacaatgga 1080
gtcagctccc ccaggctatg gtcccaagaa tcatcatcta ttcgtttacg gtgaagcttc 1140
ttgggttgag tcactgatag aagtatcgag aggctatggg aggcgaatcc aagtatatca 1200
tggttttgtt ccaatgatca caagacatta attcacgcaa agcccttgcc ctgagccgca 1260
agaacgaatg aagccgacag ggcgaaaaaa ggtacgagga ggaggcaatc gatgaccatc 1320
atctattcgt tcacggtgaa gtctctttgg ttgagtcact gatagaagct ccgagaggtt 1380
aaggtaggcg aagccaaata tgtcacgatg ttttttctaa tgataataag acaccctgag 1440
cccttgtctt gagccataac agtgaatgga acagagaagg gagactacgt gagtgaattt 1500
tttgatagtg ggatattact ctacactaaa ctctcttacc tcgagaaaat ggaggaaatg 1560
agtcgacacg ggggggcaga gagtctatcg tatgagcctc atgcaccagt agtggtaggc 1620
tttaattcgc ccagaatatc acagtgagtg ccctcccaac atgatttcaa tttgataaaa 1680
gcttgacatt aatacaaaaa ggagatctac agaaatctac catcataagg aaacatacca 1740
cagtcttgta ggaatgaatg gaaagcagaa taaatcgtca gaaattgatt taacaggtta 1800
tgaagtgagg cactacgagg tgtggttgag ctgcagactt gatgttgata gttctaacca 1860
ataacattca aaacattctg aaggaccgat gttcttagag cctcactaca atgttggtga 1920
agcttaatac tggggcaacg aatcagggct gtttatttgg ttcttatatg ctataaagtt 1980
ccctgcgtaa attttccgac ttgctaaact tttgaacagc tgaactttcg ttaaagcaga 2040
ctctatgtgc tccgcctcaa ctacatagat acaccccgag agtacatatc gacccgagca 2100
agcatatgat cccccgtgag gccagtatca gaatgcacgg tgacaggcaa ttttgataat 2160
tgtatgggat gacatttcct gcttgagagt tgaaggaaat tttggtgcga gcatattatg 2220
gaccatgaga gggtttctac gggcttcttt gacgtcatag attctcagtg aagaattgca 2280
tgcccaacat atgcgatttc aaccttaacc ttggccaaag aggcctcagg catgagcagt 2340
caccctgcct ggagaaggcg aacggtagag accaaagaac acactcagat gagggctttg 2400
tagacactta caaaaaaatg gtgtgtaaat attgagcgaa gctgagatga tttgaagtga 2460
gatatgcggg agagcctctc aggggttctc ctattatact tgtagtggat atgcgtccca 2520
acgatgaacc gtgtgtgagg ctctgcaaat gtggctccct cccaatggga catgcaggta 2580
ccaaacctta ctggaactgc tattcgatat ctgcataaaa ttgtatagaa gcatcgcgag 2640
gtgcgtgtgc tcgaatggtt tgatactgcg aaacagtgtc tgtgtgtacc ttgcttctgt 2700
ttgcctagtg tttgctccat gattgtggct agttaaagaa taaagaaaat agaaacagcg 2760
tgatacttga tggagattgt agcggactct tgctgttaca ctaatgcaag catccgcgca 2820
aacaacctcc ctcagtagcc tccacctcaa ggcaccttcc acctccgaca atccttttcc 2880
tgtctctctg gtattcactc gtcagaaata tcagtacagg gcttattcca ctcttccttt 2940
gatcgctctc tcattgcaaa tgtatcttca tcctgagcag taactaatcc acgcttcaac 3000
atgtcggatc acgagtacat cgacactgat gacgaagacg atcgatatcg cctcatcgtg 3060
aacccgtcga agcctcgaaa gatcacggaa aagaagctcc gagaccaagc tgctctacaa 3120
gcgcacatag aaaagacaca gagagatgcc gcaaggagtg ccgctccttt cagcgatcct 3180
agtaaacagt ccctcgccca gctcatgaac cagaacgaga gccacaagat catcgcctcg 3240
cctcgagaat accagattga actgttcgag cgcgctaaag agagaaacct ccttgtggtg 3300
ttgcctacag gtatgtttcg ctaccaatct ggaggctcgc taatagagta ggtactggca 3360
aaacactcat ctccgccttg ctgctacgac atcacctcga acaagagctg gaagctcgag 3420
ccatcggaaa gcccaagaaa gtcgcctttt tcctagtaga aaaggtcgcc ctctgtgttc 3480
agcaacatgc agtcctcagc tgcaacctcg gggcccaccc tgtcaccaag ttcgtaggcc 3540
atatgaaagg catgacgaag accaaagaat actgggatga gaagtttggc gaaaacatgg 3600
ttgtggtctg cactgctcag atcctcctcg actgcctcac ttgcggcttc atcaccatgt 3660
cccggataaa tcttctcata ttcgacgaag cacaccacac aaagaagaag cacccgtacg 3720
ctcgaattat ggatgggtat tattgcaaac acgaaggcga aaaacctcgc atactgggaa 3780
tgactgcttc gcctgtggac gcgcgcacca aggacgtgag agacactgcc ctggagcttg 3840
agaggtctct tgacagccag attgcaacga tttcagatga ggtgctgatg gaaaccatgc 3900
accgaaagaa gcaaaccgaa gaaactgtca actacagcag gcctgaagct cccgatgata 3960
caaagacgca tctatgggag cagatctttg ccctagtttc tcgcaacgaa cagttcaagt 4020
tgtcgctcga gttcacaaaa gaggcctcgt cagtcctcgg tacttggtgt gcggaccgat 4080
attgggagct cgcaatgaca gatctcgaga ctgaacggct cgcagccaga actagtcggg 4140
aatttattgg agacattgca gcaacaagag cagatctagc aacagaggcc gtccgacgtg 4200
tccaggaaat tgttcaggct cacaagttcg gtgcaatcga cccaaaggcc gaagggctct 4260
cggccaaggt gaaaagtctc cataagatct tgtcgcacgc tttcacaatg gatggcacca 4320
agcgttgcat tgtttttgtc gagaagcgat acacagcccg tttactttcg gatctctata 4380
gccaaccttc catgaggatc ccaagaattt ctgcttcata catggtgagt agtagccttt 4440
tcgggtcgac tttgctaata attgcaggtt ggctgtcaat caaccaattc gagcttcggc 4500
accatgtcgt ttcgagaaca agtcctggct ctccacgaat tcaagcgcgg caataccaac 4560
tgccttttca caacacctgt tgcagaagag ggcattgacg ttccagattg cgaccttgtt 4620
attcgtttcg atctctacaa ctccgtcatc caatatttgc aatccaaagg acgcgctcga 4680
caagcacgct ctcgatatat caccatgatg gaggagggaa atttgacaca tattcgaagt 4740
gcgaaacaag cattgagaga ttcacaggct ctggaaaagt tctgtctctc tctttctgct 4800
gaccgaaaac ttcatgatga tttgatagac gaggacatgg agatgatggt tgagcgcatg 4860
cagcatcaag tgtacgagat accttcgaca ggcgcacgcc ttacgtttcc cgccagcctt 4920
gaaatcctgg ccagatttgt ttctcacttg tcaactggca gctacgccaa agttgaatac 4980
caagtacaga aggttggcga tcgatatcta gctgacgtgg tcatgccatt acagtccccg 5040
gtcaactttg tgaagggtac ccaacagcgt agcaaattgc tggccaagtg ttctgcagca 5100
tttgaagcct gcaagatact gatcagagac aaacatgttg acggcaatct tcagccgaca 5160
ttcaagaaaa aggttcacgc tatgcggaac gcacggctag ctgtgagttc aaacaagaag 5220
gctgactacg acatgcgatt gcggccagag atttgggctg aacgagggga gtggactgaa 5280
tgttttgcga ctacaatcac catcaaagac gggggcaccc ttaggaaggc aatagccgga 5340
aagtcgttaa tacttctctc gcgcaagccg atcccgaaac tgccaggtgt tcctctattc 5400
tttggcaatg gacattcctc tatcgctgaa ttggcgccta atcaggatgc tcttaaactc 5460
aaccctgaag aagctgacgg attgaccaaa ttcactcatc gggtattcgc cgatgtgttc 5520
agcaaagaat acgataccac gtccgaccaa tatccatacc tcctcgcacc ttatgccgac 5580
agtccccaat cagacactcg atcacatatt gattggaatg ttgtcaacct tgtgagcaag 5640
aacgaggtgc tcgaattgga gaatgcgcca gaagacttct tcgtcaacaa gcttgtgact 5700
gatccatatg atggaggacg caagcttgtc atcaaaggta tcgacaaaac gaagaagtca 5760
tccgacccaa caccagaagg agtccccgaa tcaagaagca gagcttatag gtctgtggaa 5820
ccgacaatca tgcaatacag taacagtctg tactataaat ctcgccaaag ggtgaagtgg 5880
cgagatgatc agcctgtggt caaggcagag cttctttcct tgagacgaaa ccttctggat 5940
gagtttgaag ttgacgagaa ggtcaacatg gagtgttgca tcattctgga gcctctccat 6000
gtgtctcctg taagttgaat cccagccttg atgcttgtct aattttccca gctacctatc 6060
gatgtagtct ctatggccat ggcatttcca gcaatcattc accgaataga ttccgtcctg 6120
attgtgttgg atgcatgcaa tctccttgac cttgaaattc caccagaact cgcactggag 6180
gccatgacca aagacagcga caactctggg gagcatgaca cagaacagat caatttccaa 6240
acaggcatgg gcgacaacta tgaacggcta gagttcctcg gcgactgttt tctcaagatg 6300
gccaccacga tctcaatcta cacactgatg cctgacggaa atgagtgcaa ataccacgtt 6360
gagcgcatgc ttctcatttg caaccaaaac ctcttcaatc atgcggttga tcgcaaactc 6420
caagagttcg tccgatccaa ggcttttgac agaagaacat ggtaccccga tcttccactc 6480
aagaaaggaa aggcaccgaa aacttcgatg aagcataatc tggccgacaa gacgattgca 6540
gacgtatgtg aagctctcat tggggcagca tacctcacaa gcaaggccag caacatggat 6600
ctagctgtca aagccgtgac gcgaatgacc aagtcaaaga accacaggat gaaggctttc 6660
aaagattact ataaagccta caaggtgcct gagtggcagg aaggtaatgc gtccgcctct 6720
caacgcagcc ttgtgcaaaa ggtggcacaa gctacaggat atcgcttcaa gtctgcacag 6780
cttgtccaga gtgcattcaa acatccttcg tggccatatg agtctgtccc agattatcag 6840
cgcctcgaat ttctgggcga ttcacttctc gacatggcca tcgtcgatta tctctatcaa 6900
aacttcccca gagcagaccc tcagtggctg acggaacaca agatggccat ggtatcgaat 6960
cagttccttg gatgcctctg cgttaagctt ggtctgcacc aacacctact caccagcaca 7020
tcgagtcttc tcagccaaat ccgcgattat gtcgtcgaac ttgaagttgc tgaagaaaat 7080
gctcgcaagg aagcgaaaga agatgggact cccatgcgca aggacttctg gctgaaggtg 7140
gattcggcac ccaaggttta cgccgatgtg attgaagctc ttgttggagc catgtttgtc 7200
gattccaagt acaaattttc ggttgttgag aatttcttta ccaagttcat ccagccatat 7260
ttccaagaca tgagacttta cgataccttt gcgaacaagc acccagtcac gttcctctcc 7320
aagaagatgc atcaggaatt cggttgcaca aactggcgca tcagcgcaga ggctgtacca 7380
tgcagtgcag atcaaggcat ggcggcgctg aaagataccg aaatgtgcgc tgttttcatg 7440
gtgcatcaaa aggttatcgc ggatgacaca tctgagagtg ggaggtattc taagcagcgt 7500
gccgcgacga aagcgctcga gatacttgat tcgtttggtg aggatgttga ggcggcgaag 7560
aggtttttgg ggtgtgattg tcagcttgga ggaggggatg ttgaggttga tcatggaaca 7620
gctgtttgag ctgaaatcgg cactagaatt ggaggacatg tgtttcaggg acataaagcg 7680
cttcatagcg ttagaagcgt agacaaagat catagagcaa ttaaaatgtt gcgttgatgt 7740
gttcttggtc cactgagtgc atcgctgaga gacttgattg agctagcttc tcctccgacc 7800
aaggctccag acatgataga atatctcata tccaaagtat cataagaatc aatccattgc 7860
gacttgtata taatcccatt cacaactatt tagtcctccc aggtacaata ctagaaagcc 7920
cccgtctatc aggcatcacg tacccatccc tcgcctcaac actcccccac agctgcggcg 7980
aataatacac aaacggcaaa tcctcaaacg ccaaaaccga attcccctta ataaactcct 8040
caaatcccat gtctttccgc cccgccagtg caatttggat ctgctgtacc cagaacatag 8100
cctgtgtcaa accagtccat ttcgcaatct ccagcgccgt tgacgaagct agcgaagcat 8160
caccgcgttt tgtgctcgta gcggtagatt tggtcttttc tgtaagacgg ttgaatagga 8220
aacggatgag gctcgcgtgg ctggcgacgt tgagttcgga ctctgggatg agttttgctt 8280
cgtcgacgag gagtgctact aggaggtcta gatcctcagg gggtgggagg tctgtatccg 8340
ttgagcggtg gttcatggcg tttatcattt gtgaacgagc gaggtctttt cttgcttgtg 8400
atggtaaacc aaagatattg gggagaggtt tcttgtcggg gttgacgaat gtcattcgag 8460
cggcgatgct ctcccacgtt gattgggagt aatactccct ccactcatca cccttaatat 8520
cgaacagaga cttaaacgcc tcgtaagtgg taaattggct ttcggacgat tcaacctcca 8580
aggagcgggt ataggcgtga atgatctgaa tccagaaata cgcctgtgtc tcagagtacg 8640
gaggaaccga agaatccgaa gccctcaaac gcatagtcga agactgcagt gcttcaagag 8700
cctgtttaac aacccctccc cgtctaagct ttgacgaaag agtcttttga accaccgaaa 8760
acgcaaatcg aggcagccga tcaacatcgt tgacagcttt ttctcgcaaa ggcgcagaag 8820
tggcctgctt aatagtggga agaggctgta agtcaggaag actatagtga tcccgagcta 8880
gctgcgagaa caacaggttc ttggagtagt atgatctcca gaggcccgag ttcatgagat 8940
ggggtgctga gaagacgatg tcggcgtagt cttctcgaga ggggaatttg tcgaggtgtg 9000
attttgcttg gtattctatt gcagcgactt gtatttgatg aagccagaat atcgtcatcg 9060
ttctaaatag tcagtcatca gaaataggga gtggatgggt gacatacttg tgcgctgtgt 9120
tgcgaaacct ctcaggattt ccctcccgca gccgattcaa gtgcttcata aactcatcag 9180
cacactccaa caatcccaat cctttaccga aacaatcgtg catgacaaag aaacccgctc 9240
tgagatgagt gaaatgatcc cactcctcca aagttccatc taaaaacgat tcccagaacg 9300
tcttggcatc agcactctca gcattagccg ttctaatcct attgcgaagt tcctcttcac 9360
tcggcccttt ctccctctgt tcaatctcag ctttcgtatc cttagctacg ttcttcggtt 9420
tcaacgtctt tcgtatctca tccatgacgt tatgaacctg gcaaccccat agggcactta 9480
gaccaggatt atccaggatc tttatatcga gcttatcagc atatggcttg atctcagctt 9540
ctatcttagc ctttagttct tttacgactt ttggtcgttc ttcttccgag aggaggtctt 9600
gtttgttgaa gatgataaac atgtgctttg cctcgtattc aagaatcata ttcattccca 9660
tgcggagata ctcaagcgag aactcaacac gatcaggatc tgcgtcggtg cagctttgaa 9720
tgaatactag gaagcgatct tgggccatgt agtgtcgtat gagaggacga atggcatcac 9780
agcctagatt gttagctgag atcgtgggct acagaggata gcttacctcc aacgtcccag 9840
agggtaactt tctctccatc aggatagtct atagtctcga cattgaagcc aattgtcgga 9900
atggcctgca caacctcatt aaacttgagt ctgtatagaa atgttgtttt accggatgcg 9960
tcattgccta gaacgaggcc gacatgttcg cggcctccgc ccaagagcca acgagcgatg 10020
cctgggacat tagcattgag acgaccactg cttacaataa aacttacgca tgattattga 10080
ggattgaatt gagttgagga ttaaacagaa acagaaataa caggctcttt tatatgtgat 10140
tcaaagtcgc tgccttgaag tggggagctg agattagacg tggcttcaag aatctgcctt 10200
gctcttcagc ttctcaaaat aactacgcta agtgtccact ccagcccctc agattctagt 10260
tcggcaacga ggtaatgctt tacagtcttc gtgagaagat tgaactatac tattcatttc 10320
catgcaaatc tagtccacca tgctccagcc ttgggtatca atcctaatcc atagacccag 10380
caagcgcgac agcactaaac ctcaaatcct taccctccct ctccaaaaac ttcaacgccc 10440
ccagcgccag gccctttgga ctcagcacat cctcgttatc ctccagatcg cctcgtcgaa 10500
taggtccttt tcgccgtccg tcgagctccc acaatccacc gtctgtgccc ttggcgaagc 10560
atacgtagtg tagctccacg tcgtcttctg cagcgggcgc gggtgtgtcg ccttgtgtag 10620
cagcttcttt atgcgcagtc gcgagatcag gtgtcgtttc gagaactttt gcgcggccgt 10680
ggggatcaag agggatactc ttcttgatca atacatcaag cgtagaatcc tcc 10733
<210> 2
<211> 4933
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 2
ctaatgcaag catccgcgca aacaacctcc ctcagtagcc tccacctcaa ggcaccttcc 60
acctccgaca atccttttcc tgtctctctg gtattcactc gtcagaaata tcagtacagg 120
gcttattcca ctcttccttt gatcgctctc tcattgcaaa tgtatcttca tcctgagcag 180
taactaatcc acgcttcaac atgtcggatc acgagtacat cgacactgat gacgaagacg 240
atcgatatcg cctcatcgtg aacccgtcga agcctcgaaa gatcacggaa aagaagctcc 300
gagaccaagc tgctctacaa gcgcacatag aaaagacaca gagagatgcc gcaaggagtg 360
ccgctccttt cagcgatcct agtaaacagt ccctcgccca gctcatgaac cagaacgaga 420
gccacaagat catcgcctcg cctcgagaat accagattga actgttcgag cgcgctaaag 480
agagaaacct ccttgtggtg ttgcctacag gtatgtttcg ctaccaatct ggaggctcgc 540
taatagagta ggtactggca aaacactcat ctccgccttg ctgctacgac atcacctcga 600
acaagagctg gaagctcgag ccatcggaaa gcccaagaaa gtcgcctttt tcctagtaga 660
aaaggtcgcc ctctgtgttc agcaacatgc agtcctcagc tgcaacctcg gggcccaccc 720
tgtcaccaag ttcgtaggcc atatgaaagg catgacgaag accaaagaat actgggatga 780
gaagtttggc gaaaacatgg ttgtggtctg cactgctcag atcctcctcg actgcctcac 840
ttgcggcttc atcaccatgt cccggataaa tcttctcata ttcgacgaag cacaccacac 900
aaagaagaag cacccgtacg ctcgaattat ggatgggtat tattgcaaac acgaaggcga 960
aaaacctcgc atactgggaa tgactgcttc gcctgtggac gcgcgcacca aggacgtgag 1020
agacactgcc ctggagcttg agaggtctct tgacagccag attgcaacga tttcagatga 1080
ggtgctgatg gaaaccatgc accgaaagaa gcaaaccgaa gaaactgtca actacagcag 1140
gcctgaagct cccgatgata caaagacgca tctatgggag cagatctttg ccctagtttc 1200
tcgcaacgaa cagttcaagt tgtcgctcga gttcacaaaa gaggcctcgt cagtcctcgg 1260
tacttggtgt gcggaccgat attgggagct cgcaatgaca gatctcgaga ctgaacggct 1320
cgcagccaga actagtcggg aatttattgg agacattgca gcaacaagag cagatctagc 1380
aacagaggcc gtccgacgtg tccaggaaat tgttcaggct cacaagttcg gtgcaatcga 1440
cccaaaggcc gaagggctct cggccaaggt gaaaagtctc cataagatct tgtcgcacgc 1500
tttcacaatg gatggcacca agcgttgcat tgtttttgtc gagaagcgat acacagcccg 1560
tttactttcg gatctctata gccaaccttc catgaggatc ccaagaattt ctgcttcata 1620
catggtgagt agtagccttt tcgggtcgac tttgctaata attgcaggtt ggctgtcaat 1680
caaccaattc gagcttcggc accatgtcgt ttcgagaaca agtcctggct ctccacgaat 1740
tcaagcgcgg caataccaac tgccttttca caacacctgt tgcagaagag ggcattgacg 1800
ttccagattg cgaccttgtt attcgtttcg atctctacaa ctccgtcatc caatatttgc 1860
aatccaaagg acgcgctcga caagcacgct ctcgatatat caccatgatg gaggagggaa 1920
atttgacaca tattcgaagt gcgaaacaag cattgagaga ttcacaggct ctggaaaagt 1980
tctgtctctc tctttctgct gaccgaaaac ttcatgatga tttgatagac gaggacatgg 2040
agatgatggt tgagcgcatg cagcatcaag tgtacgagat accttcgaca ggcgcacgcc 2100
ttacgtttcc cgccagcctt gaaatcctgg ccagatttgt ttctcacttg tcaactggca 2160
gctacgccaa agttgaatac caagtacaga aggttggcga tcgatatcta gctgacgtgg 2220
tcatgccatt acagtccccg gtcaactttg tgaagggtac ccaacagcgt agcaaattgc 2280
tggccaagtg ttctgcagca tttgaagcct gcaagatact gatcagagac aaacatgttg 2340
acggcaatct tcagccgaca ttcaagaaaa aggttcacgc tatgcggaac gcacggctag 2400
ctgtgagttc aaacaagaag gctgactacg acatgcgatt gcggccagag atttgggctg 2460
aacgagggga gtggactgaa tgttttgcga ctacaatcac catcaaagac gggggcaccc 2520
ttaggaaggc aatagccgga aagtcgttaa tacttctctc gcgcaagccg atcccgaaac 2580
tgccaggtgt tcctctattc tttggcaatg gacattcctc tatcgctgaa ttggcgccta 2640
atcaggatgc tcttaaactc aaccctgaag aagctgacgg attgaccaaa ttcactcatc 2700
gggtattcgc cgatgtgttc agcaaagaat acgataccac gtccgaccaa tatccatacc 2760
tcctcgcacc ttatgccgac agtccccaat cagacactcg atcacatatt gattggaatg 2820
ttgtcaacct tgtgagcaag aacgaggtgc tcgaattgga gaatgcgcca gaagacttct 2880
tcgtcaacaa gcttgtgact gatccatatg atggaggacg caagcttgtc atcaaaggta 2940
tcgacaaaac gaagaagtca tccgacccaa caccagaagg agtccccgaa tcaagaagca 3000
gagcttatag gtctgtggaa ccgacaatca tgcaatacag taacagtctg tactataaat 3060
ctcgccaaag ggtgaagtgg cgagatgatc agcctgtggt caaggcagag cttctttcct 3120
tgagacgaaa ccttctggat gagtttgaag ttgacgagaa ggtcaacatg gagtgttgca 3180
tcattctgga gcctctccat gtgtctcctg taagttgaat cccagccttg atgcttgtct 3240
aattttccca gctacctatc gatgtagtct ctatggccat ggcatttcca gcaatcattc 3300
accgaataga ttccgtcctg attgtgttgg atgcatgcaa tctccttgac cttgaaattc 3360
caccagaact cgcactggag gccatgacca aagacagcga caactctggg gagcatgaca 3420
cagaacagat caatttccaa acaggcatgg gcgacaacta tgaacggcta gagttcctcg 3480
gcgactgttt tctcaagatg gccaccacga tctcaatcta cacactgatg cctgacggaa 3540
atgagtgcaa ataccacgtt gagcgcatgc ttctcatttg caaccaaaac ctcttcaatc 3600
atgcggttga tcgcaaactc caagagttcg tccgatccaa ggcttttgac agaagaacat 3660
ggtaccccga tcttccactc aagaaaggaa aggcaccgaa aacttcgatg aagcataatc 3720
tggccgacaa gacgattgca gacgtatgtg aagctctcat tggggcagca tacctcacaa 3780
gcaaggccag caacatggat ctagctgtca aagccgtgac gcgaatgacc aagtcaaaga 3840
accacaggat gaaggctttc aaagattact ataaagccta caaggtgcct gagtggcagg 3900
aaggtaatgc gtccgcctct caacgcagcc ttgtgcaaaa ggtggcacaa gctacaggat 3960
atcgcttcaa gtctgcacag cttgtccaga gtgcattcaa acatccttcg tggccatatg 4020
agtctgtccc agattatcag cgcctcgaat ttctgggcga ttcacttctc gacatggcca 4080
tcgtcgatta tctctatcaa aacttcccca gagcagaccc tcagtggctg acggaacaca 4140
agatggccat ggtatcgaat cagttccttg gatgcctctg cgttaagctt ggtctgcacc 4200
aacacctact caccagcaca tcgagtcttc tcagccaaat ccgcgattat gtcgtcgaac 4260
ttgaagttgc tgaagaaaat gctcgcaagg aagcgaaaga agatgggact cccatgcgca 4320
aggacttctg gctgaaggtg gattcggcac ccaaggttta cgccgatgtg attgaagctc 4380
ttgttggagc catgtttgtc gattccaagt acaaattttc ggttgttgag aatttcttta 4440
ccaagttcat ccagccatat ttccaagaca tgagacttta cgataccttt gcgaacaagc 4500
acccagtcac gttcctctcc aagaagatgc atcaggaatt cggttgcaca aactggcgca 4560
tcagcgcaga ggctgtacca tgcagtgcag atcaaggcat ggcggcgctg aaagataccg 4620
aaatgtgcgc tgttttcatg gtgcatcaaa aggttatcgc ggatgacaca tctgagagtg 4680
ggaggtattc taagcagcgt gccgcgacga aagcgctcga gatacttgat tcgtttggtg 4740
aggatgttga ggcggcgaag aggtttttgg ggtgtgattg tcagcttgga ggaggggatg 4800
ttgaggttga tcatggaaca gctgtttgag ctgaaatcgg cactagaatt ggaggacatg 4860
tgtttcaggg acataaagcg cttcatagcg ttagaagcgt agacaaagat catagagcaa 4920
ttaaaatgtt gcg 4933
<210> 3
<211> 4506
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 3
atgtcggatc acgagtacat cgacactgat gacgaagacg atcgatatcg cctcatcgtg 60
aacccgtcga agcctcgaaa gatcacggaa aagaagctcc gagaccaagc tgctctacaa 120
gcgcacatag aaaagacaca gagagatgcc gcaaggagtg ccgctccttt cagcgatcct 180
agtaaacagt ccctcgccca gctcatgaac cagaacgaga gccacaagat catcgcctcg 240
cctcgagaat accagattga actgttcgag cgcgctaaag agagaaacct ccttgtggtg 300
ttgcctacag taggtactgg caaaacactc atctccgcct tgctgctacg acatcacctc 360
gaacaagagc tggaagctcg agccatcgga aagcccaaga aagtcgcctt tttcctagta 420
gaaaaggtcg ccctctgtgt tcagcaacat gcagtcctca gctgcaacct cggggcccac 480
cctgtcacca agttcgtagg ccatatgaaa ggcatgacga agaccaaaga atactgggat 540
gagaagtttg gcgaaaacat ggttgtggtc tgcactgctc agatcctcct cgactgcctc 600
acttgcggct tcatcaccat gtcccggata aatcttctca tattcgacga agcacaccac 660
acaaagaaga agcacccgta cgctcgaatt atggatgggt attattgcaa acacgaaggc 720
gaaaaacctc gcatactggg aatgactgct tcgcctgtgg acgcgcgcac caaggacgtg 780
agagacactg ccctggagct tgagaggtct cttgacagcc agattgcaac gatttcagat 840
gaggtgctga tggaaaccat gcaccgaaag aagcaaaccg aagaaactgt caactacagc 900
aggcctgaag ctcccgatga tacaaagacg catctatggg agcagatctt tgccctagtt 960
tctcgcaacg aacagttcaa gttgtcgctc gagttcacaa aagaggcctc gtcagtcctc 1020
ggtacttggt gtgcggaccg atattgggag ctcgcaatga cagatctcga gactgaacgg 1080
ctcgcagcca gaactagtcg ggaatttatt ggagacattg cagcaacaag agcagatcta 1140
gcaacagagg ccgtccgacg tgtccaggaa attgttcagg ctcacaagtt cggtgcaatc 1200
gacccaaagg ccgaagggct ctcggccaag gtgaaaagtc tccataagat cttgtcgcac 1260
gctttcacaa tggatggcac caagcgttgc attgtttttg tcgagaagcg atacacagcc 1320
cgtttacttt cggatctcta tagccaacct tccatgagga tcccaagaat ttctgcttca 1380
tacatggttg gctgtcaatc aaccaattcg agcttcggca ccatgtcgtt tcgagaacaa 1440
gtcctggctc tccacgaatt caagcgcggc aataccaact gccttttcac aacacctgtt 1500
gcagaagagg gcattgacgt tccagattgc gaccttgtta ttcgtttcga tctctacaac 1560
tccgtcatcc aatatttgca atccaaagga cgcgctcgac aagcacgctc tcgatatatc 1620
accatgatgg aggagggaaa tttgacacat attcgaagtg cgaaacaagc attgagagat 1680
tcacaggctc tggaaaagtt ctgtctctct ctttctgctg accgaaaact tcatgatgat 1740
ttgatagacg aggacatgga gatgatggtt gagcgcatgc agcatcaagt gtacgagata 1800
ccttcgacag gcgcacgcct tacgtttccc gccagccttg aaatcctggc cagatttgtt 1860
tctcacttgt caactggcag ctacgccaaa gttgaatacc aagtacagaa ggttggcgat 1920
cgatatctag ctgacgtggt catgccatta cagtccccgg tcaactttgt gaagggtacc 1980
caacagcgta gcaaattgct ggccaagtgt tctgcagcat ttgaagcctg caagatactg 2040
atcagagaca aacatgttga cggcaatctt cagccgacat tcaagaaaaa ggttcacgct 2100
atgcggaacg cacggctagc tgtgagttca aacaagaagg ctgactacga catgcgattg 2160
cggccagaga tttgggctga acgaggggag tggactgaat gttttgcgac tacaatcacc 2220
atcaaagacg ggggcaccct taggaaggca atagccggaa agtcgttaat acttctctcg 2280
cgcaagccga tcccgaaact gccaggtgtt cctctattct ttggcaatgg acattcctct 2340
atcgctgaat tggcgcctaa tcaggatgct cttaaactca accctgaaga agctgacgga 2400
ttgaccaaat tcactcatcg ggtattcgcc gatgtgttca gcaaagaata cgataccacg 2460
tccgaccaat atccatacct cctcgcacct tatgccgaca gtccccaatc agacactcga 2520
tcacatattg attggaatgt tgtcaacctt gtgagcaaga acgaggtgct cgaattggag 2580
aatgcgccag aagacttctt cgtcaacaag cttgtgactg atccatatga tggaggacgc 2640
aagcttgtca tcaaaggtat cgacaaaacg aagaagtcat ccgacccaac accagaagga 2700
gtccccgaat caagaagcag agcttatagg tctgtggaac cgacaatcat gcaatacagt 2760
aacagtctgt actataaatc tcgccaaagg gtgaagtggc gagatgatca gcctgtggtc 2820
aaggcagagc ttctttcctt gagacgaaac cttctggatg agtttgaagt tgacgagaag 2880
gtcaacatgg agtgttgcat cattctggag cctctccatg tgtctcctct acctatcgat 2940
gtagtctcta tggccatggc atttccagca atcattcacc gaatagattc cgtcctgatt 3000
gtgttggatg catgcaatct ccttgacctt gaaattccac cagaactcgc actggaggcc 3060
atgaccaaag acagcgacaa ctctggggag catgacacag aacagatcaa tttccaaaca 3120
ggcatgggcg acaactatga acggctagag ttcctcggcg actgttttct caagatggcc 3180
accacgatct caatctacac actgatgcct gacggaaatg agtgcaaata ccacgttgag 3240
cgcatgcttc tcatttgcaa ccaaaacctc ttcaatcatg cggttgatcg caaactccaa 3300
gagttcgtcc gatccaaggc ttttgacaga agaacatggt accccgatct tccactcaag 3360
aaaggaaagg caccgaaaac ttcgatgaag cataatctgg ccgacaagac gattgcagac 3420
gtatgtgaag ctctcattgg ggcagcatac ctcacaagca aggccagcaa catggatcta 3480
gctgtcaaag ccgtgacgcg aatgaccaag tcaaagaacc acaggatgaa ggctttcaaa 3540
gattactata aagcctacaa ggtgcctgag tggcaggaag gtaatgcgtc cgcctctcaa 3600
cgcagccttg tgcaaaaggt ggcacaagct acaggatatc gcttcaagtc tgcacagctt 3660
gtccagagtg cattcaaaca tccttcgtgg ccatatgagt ctgtcccaga ttatcagcgc 3720
ctcgaatttc tgggcgattc acttctcgac atggccatcg tcgattatct ctatcaaaac 3780
ttccccagag cagaccctca gtggctgacg gaacacaaga tggccatggt atcgaatcag 3840
ttccttggat gcctctgcgt taagcttggt ctgcaccaac acctactcac cagcacatcg 3900
agtcttctca gccaaatccg cgattatgtc gtcgaacttg aagttgctga agaaaatgct 3960
cgcaaggaag cgaaagaaga tgggactccc atgcgcaagg acttctggct gaaggtggat 4020
tcggcaccca aggtttacgc cgatgtgatt gaagctcttg ttggagccat gtttgtcgat 4080
tccaagtaca aattttcggt tgttgagaat ttctttacca agttcatcca gccatatttc 4140
caagacatga gactttacga tacctttgcg aacaagcacc cagtcacgtt cctctccaag 4200
aagatgcatc aggaattcgg ttgcacaaac tggcgcatca gcgcagaggc tgtaccatgc 4260
agtgcagatc aaggcatggc ggcgctgaaa gataccgaaa tgtgcgctgt tttcatggtg 4320
catcaaaagg ttatcgcgga tgacacatct gagagtggga ggtattctaa gcagcgtgcc 4380
gcgacgaaag cgctcgagat acttgattcg tttggtgagg atgttgaggc ggcgaagagg 4440
tttttggggt gtgattgtca gcttggagga ggggatgttg aggttgatca tggaacagct 4500
gtttga 4506
<210> 4
<211> 1501
<212> PRT
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 4
Met Ser Asp His Glu Tyr Ile Asp Thr Asp Asp Glu Asp Asp Arg Tyr
1 5 10 15
Arg Leu Ile Val Asn Pro Ser Lys Pro Arg Lys Ile Thr Glu Lys Lys
20 25 30
Leu Arg Asp Gln Ala Ala Leu Gln Ala His Ile Glu Lys Thr Gln Arg
35 40 45
Asp Ala Ala Arg Ser Ala Ala Pro Phe Ser Asp Pro Ser Lys Gln Ser
50 55 60
Leu Ala Gln Leu Met Asn Gln Asn Glu Ser His Lys Ile Ile Ala Ser
65 70 75 80
Pro Arg Glu Tyr Gln Ile Glu Leu Phe Glu Arg Ala Lys Glu Arg Asn
85 90 95
Leu Leu Val Val Leu Pro Thr Val Gly Thr Gly Lys Thr Leu Ile Ser
100 105 110
Ala Leu Leu Leu Arg His His Leu Glu Gln Glu Leu Glu Ala Arg Ala
115 120 125
Ile Gly Lys Pro Lys Lys Val Ala Phe Phe Leu Val Glu Lys Val Ala
130 135 140
Leu Cys Val Gln Gln His Ala Val Leu Ser Cys Asn Leu Gly Ala His
145 150 155 160
Pro Val Thr Lys Phe Val Gly His Met Lys Gly Met Thr Lys Thr Lys
165 170 175
Glu Tyr Trp Asp Glu Lys Phe Gly Glu Asn Met Val Val Val Cys Thr
180 185 190
Ala Gln Ile Leu Leu Asp Cys Leu Thr Cys Gly Phe Ile Thr Met Ser
195 200 205
Arg Ile Asn Leu Leu Ile Phe Asp Glu Ala His His Thr Lys Lys Lys
210 215 220
His Pro Tyr Ala Arg Ile Met Asp Gly Tyr Tyr Cys Lys His Glu Gly
225 230 235 240
Glu Lys Pro Arg Ile Leu Gly Met Thr Ala Ser Pro Val Asp Ala Arg
245 250 255
Thr Lys Asp Val Arg Asp Thr Ala Leu Glu Leu Glu Arg Ser Leu Asp
260 265 270
Ser Gln Ile Ala Thr Ile Ser Asp Glu Val Leu Met Glu Thr Met His
275 280 285
Arg Lys Lys Gln Thr Glu Glu Thr Val Asn Tyr Ser Arg Pro Glu Ala
290 295 300
Pro Asp Asp Thr Lys Thr His Leu Trp Glu Gln Ile Phe Ala Leu Val
305 310 315 320
Ser Arg Asn Glu Gln Phe Lys Leu Ser Leu Glu Phe Thr Lys Glu Ala
325 330 335
Ser Ser Val Leu Gly Thr Trp Cys Ala Asp Arg Tyr Trp Glu Leu Ala
340 345 350
Met Thr Asp Leu Glu Thr Glu Arg Leu Ala Ala Arg Thr Ser Arg Glu
355 360 365
Phe Ile Gly Asp Ile Ala Ala Thr Arg Ala Asp Leu Ala Thr Glu Ala
370 375 380
Val Arg Arg Val Gln Glu Ile Val Gln Ala His Lys Phe Gly Ala Ile
385 390 395 400
Asp Pro Lys Ala Glu Gly Leu Ser Ala Lys Val Lys Ser Leu His Lys
405 410 415
Ile Leu Ser His Ala Phe Thr Met Asp Gly Thr Lys Arg Cys Ile Val
420 425 430
Phe Val Glu Lys Arg Tyr Thr Ala Arg Leu Leu Ser Asp Leu Tyr Ser
435 440 445
Gln Pro Ser Met Arg Ile Pro Arg Ile Ser Ala Ser Tyr Met Val Gly
450 455 460
Cys Gln Ser Thr Asn Ser Ser Phe Gly Thr Met Ser Phe Arg Glu Gln
465 470 475 480
Val Leu Ala Leu His Glu Phe Lys Arg Gly Asn Thr Asn Cys Leu Phe
485 490 495
Thr Thr Pro Val Ala Glu Glu Gly Ile Asp Val Pro Asp Cys Asp Leu
500 505 510
Val Ile Arg Phe Asp Leu Tyr Asn Ser Val Ile Gln Tyr Leu Gln Ser
515 520 525
Lys Gly Arg Ala Arg Gln Ala Arg Ser Arg Tyr Ile Thr Met Met Glu
530 535 540
Glu Gly Asn Leu Thr His Ile Arg Ser Ala Lys Gln Ala Leu Arg Asp
545 550 555 560
Ser Gln Ala Leu Glu Lys Phe Cys Leu Ser Leu Ser Ala Asp Arg Lys
565 570 575
Leu His Asp Asp Leu Ile Asp Glu Asp Met Glu Met Met Val Glu Arg
580 585 590
Met Gln His Gln Val Tyr Glu Ile Pro Ser Thr Gly Ala Arg Leu Thr
595 600 605
Phe Pro Ala Ser Leu Glu Ile Leu Ala Arg Phe Val Ser His Leu Ser
610 615 620
Thr Gly Ser Tyr Ala Lys Val Glu Tyr Gln Val Gln Lys Val Gly Asp
625 630 635 640
Arg Tyr Leu Ala Asp Val Val Met Pro Leu Gln Ser Pro Val Asn Phe
645 650 655
Val Lys Gly Thr Gln Gln Arg Ser Lys Leu Leu Ala Lys Cys Ser Ala
660 665 670
Ala Phe Glu Ala Cys Lys Ile Leu Ile Arg Asp Lys His Val Asp Gly
675 680 685
Asn Leu Gln Pro Thr Phe Lys Lys Lys Val His Ala Met Arg Asn Ala
690 695 700
Arg Leu Ala Val Ser Ser Asn Lys Lys Ala Asp Tyr Asp Met Arg Leu
705 710 715 720
Arg Pro Glu Ile Trp Ala Glu Arg Gly Glu Trp Thr Glu Cys Phe Ala
725 730 735
Thr Thr Ile Thr Ile Lys Asp Gly Gly Thr Leu Arg Lys Ala Ile Ala
740 745 750
Gly Lys Ser Leu Ile Leu Leu Ser Arg Lys Pro Ile Pro Lys Leu Pro
755 760 765
Gly Val Pro Leu Phe Phe Gly Asn Gly His Ser Ser Ile Ala Glu Leu
770 775 780
Ala Pro Asn Gln Asp Ala Leu Lys Leu Asn Pro Glu Glu Ala Asp Gly
785 790 795 800
Leu Thr Lys Phe Thr His Arg Val Phe Ala Asp Val Phe Ser Lys Glu
805 810 815
Tyr Asp Thr Thr Ser Asp Gln Tyr Pro Tyr Leu Leu Ala Pro Tyr Ala
820 825 830
Asp Ser Pro Gln Ser Asp Thr Arg Ser His Ile Asp Trp Asn Val Val
835 840 845
Asn Leu Val Ser Lys Asn Glu Val Leu Glu Leu Glu Asn Ala Pro Glu
850 855 860
Asp Phe Phe Val Asn Lys Leu Val Thr Asp Pro Tyr Asp Gly Gly Arg
865 870 875 880
Lys Leu Val Ile Lys Gly Ile Asp Lys Thr Lys Lys Ser Ser Asp Pro
885 890 895
Thr Pro Glu Gly Val Pro Glu Ser Arg Ser Arg Ala Tyr Arg Ser Val
900 905 910
Glu Pro Thr Ile Met Gln Tyr Ser Asn Ser Leu Tyr Tyr Lys Ser Arg
915 920 925
Gln Arg Val Lys Trp Arg Asp Asp Gln Pro Val Val Lys Ala Glu Leu
930 935 940
Leu Ser Leu Arg Arg Asn Leu Leu Asp Glu Phe Glu Val Asp Glu Lys
945 950 955 960
Val Asn Met Glu Cys Cys Ile Ile Leu Glu Pro Leu His Val Ser Pro
965 970 975
Leu Pro Ile Asp Val Val Ser Met Ala Met Ala Phe Pro Ala Ile Ile
980 985 990
His Arg Ile Asp Ser Val Leu Ile Val Leu Asp Ala Cys Asn Leu Leu
995 1000 1005
Asp Leu Glu Ile Pro Pro Glu Leu Ala Leu Glu Ala Met Thr Lys Asp
1010 1015 1020
Ser Asp Asn Ser Gly Glu His Asp Thr Glu Gln Ile Asn Phe Gln Thr
1025 1030 1035 1040
Gly Met Gly Asp Asn Tyr Glu Arg Leu Glu Phe Leu Gly Asp Cys Phe
1045 1050 1055
Leu Lys Met Ala Thr Thr Ile Ser Ile Tyr Thr Leu Met Pro Asp Gly
1060 1065 1070
Asn Glu Cys Lys Tyr His Val Glu Arg Met Leu Leu Ile Cys Asn Gln
1075 1080 1085
Asn Leu Phe Asn His Ala Val Asp Arg Lys Leu Gln Glu Phe Val Arg
1090 1095 1100
Ser Lys Ala Phe Asp Arg Arg Thr Trp Tyr Pro Asp Leu Pro Leu Lys
1105 1110 1115 1120
Lys Gly Lys Ala Pro Lys Thr Ser Met Lys His Asn Leu Ala Asp Lys
1125 1130 1135
Thr Ile Ala Asp Val Cys Glu Ala Leu Ile Gly Ala Ala Tyr Leu Thr
1140 1145 1150
Ser Lys Ala Ser Asn Met Asp Leu Ala Val Lys Ala Val Thr Arg Met
1155 1160 1165
Thr Lys Ser Lys Asn His Arg Met Lys Ala Phe Lys Asp Tyr Tyr Lys
1170 1175 1180
Ala Tyr Lys Val Pro Glu Trp Gln Glu Gly Asn Ala Ser Ala Ser Gln
1185 1190 1195 1200
Arg Ser Leu Val Gln Lys Val Ala Gln Ala Thr Gly Tyr Arg Phe Lys
1205 1210 1215
Ser Ala Gln Leu Val Gln Ser Ala Phe Lys His Pro Ser Trp Pro Tyr
1220 1225 1230
Glu Ser Val Pro Asp Tyr Gln Arg Leu Glu Phe Leu Gly Asp Ser Leu
1235 1240 1245
Leu Asp Met Ala Ile Val Asp Tyr Leu Tyr Gln Asn Phe Pro Arg Ala
1250 1255 1260
Asp Pro Gln Trp Leu Thr Glu His Lys Met Ala Met Val Ser Asn Gln
1265 1270 1275 1280
Phe Leu Gly Cys Leu Cys Val Lys Leu Gly Leu His Gln His Leu Leu
1285 1290 1295
Thr Ser Thr Ser Ser Leu Leu Ser Gln Ile Arg Asp Tyr Val Val Glu
1300 1305 1310
Leu Glu Val Ala Glu Glu Asn Ala Arg Lys Glu Ala Lys Glu Asp Gly
1315 1320 1325
Thr Pro Met Arg Lys Asp Phe Trp Leu Lys Val Asp Ser Ala Pro Lys
1330 1335 1340
Val Tyr Ala Asp Val Ile Glu Ala Leu Val Gly Ala Met Phe Val Asp
1345 1350 1355 1360
Ser Lys Tyr Lys Phe Ser Val Val Glu Asn Phe Phe Thr Lys Phe Ile
1365 1370 1375
Gln Pro Tyr Phe Gln Asp Met Arg Leu Tyr Asp Thr Phe Ala Asn Lys
1380 1385 1390
His Pro Val Thr Phe Leu Ser Lys Lys Met His Gln Glu Phe Gly Cys
1395 1400 1405
Thr Asn Trp Arg Ile Ser Ala Glu Ala Val Pro Cys Ser Ala Asp Gln
1410 1415 1420
Gly Met Ala Ala Leu Lys Asp Thr Glu Met Cys Ala Val Phe Met Val
1425 1430 1435 1440
His Gln Lys Val Ile Ala Asp Asp Thr Ser Glu Ser Gly Arg Tyr Ser
1445 1450 1455
Lys Gln Arg Ala Ala Thr Lys Ala Leu Glu Ile Leu Asp Ser Phe Gly
1460 1465 1470
Glu Asp Val Glu Ala Ala Lys Arg Phe Leu Gly Cys Asp Cys Gln Leu
1475 1480 1485
Gly Gly Gly Asp Val Glu Val Asp His Gly Thr Ala Val
1490 1495 1500
<210> 5
<211> 23
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 5
ggctatggtc ccaagaatca tca 23
<210> 6
<211> 46
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 6
acctccacta gctccagcca agcgagtgaa taccagagag acagga 46
<210> 7
<211> 46
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 7
gaatagagta gatgccgacc gggtgatgtg ttcttggtcc actgag 46
<210> 8
<211> 21
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 8
tctcgcttga gtatctccgc a 21
<210> 9
<211> 22
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 9
cttggctgga gctagtggag gt 22
<210> 10
<211> 23
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 10
cccggtcggc atctactcta ttc 23
<210> 11
<211> 23
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 11
ctgagccctt gtcttgagcc ata 23
<210> 12
<211> 20
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 12
ggatgcctcc gctcgaagta 20
<210> 13
<211> 20
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 13
cgttgcaaga cctgcctgaa 20
<210> 14
<211> 22
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 14
tctcagagcg ggtttctttg tc 22
<210> 15
<211> 20
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 15
gacagacgtc gcggtgagtt 20
<210> 16
<211> 21
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 16
tctggaccga tggctgtgta g 21
<210> 17
<211> 21
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 17
acaatcacca tcaaagacgg g 21
<210> 18
<211> 21
<212> DNA
<213>withered germ of water-melon (Fusarium oxysporum f. sp. niveum)
<400> 18
ccaacacaat caggacggaa t 21

Claims (4)

1. a kind of withered germ of water-melon RNAi component gene FonDCL1, which is characterized in that comprising thereon, downstream nucleotide sequence Nucleotide sequence as shown in SEQ ID NO:1.
2. a kind of withered germ of water-melon RNAi component gene FonDCL1 according to claim 1, which is characterized in that described The length of upstream and downstream nucleotide sequence is 3Kb.
3. a kind of construction method of withered germ of water-melon FonDCL1 deletion mutant body, which is characterized in that pass through following steps It obtains:
1) FonDCL1 gene delection recombinant dna fragment constructs
First round PCR amplification: using watermelon blight genomic DNA as template, primers F on1DCL1-LBCK/Fon1DCL1-HPH- LB-R expands FonDCL1 upstream region of gene FonDCL1-UP segment, primers F on1DCL1-HPH-RB-F/Fon1DCL1-RBCK amplification FonDCL1 downstream of gene FonDCL1-DOWN segment;Using carrier pCT74 Plasmid DNA as template, primer HYG-F/HYG-R amplification Resistant gene HYG segment;
Second wheel PCR amplification: using FonDCL1-UP and HYG as template, primers F on1DCL1-LB-F/HYG-R1 amplification FonDCL1-UP+HY segment, using FonDCL1-DOWN and HYG as template, primer HYG-F1/Fon1DCL1-RB-R expands YG+ FonDCL1-DOWN segment;
2) protoplast and FonDCL1-UP+HY segment and YG+FonDCL1-DOWN segment are mixed, carries out FonDCL1 gene Deleting genetic conversion, obtains mutant;
The primers F on1DCL1-LBCK, Fon1DCL1-HPH-LB-R, Fon1DCL1-HPH-RB-F, Fon1DCL1-RBCK, The nucleotide sequence of HYG-F, HYG-R, Fon1DCL1-LB-F, HYG-R1, HYG-F1, Fon1DCL1-RB-R are successively such as SEQ ID NO:5、SEQ ID NO:6、SEQ ID NO:7、SEQ ID NO:8、SEQ ID NO:9、SEQ ID NO:10、SEQ ID NO: 11, SEQ ID NO:12, SEQ ID NO:13, shown in SEQ ID NO:14;
The nucleotide sequence of the watermelon blight genomic DNA is as shown in SEQ ID NO:1.
4. a kind of construction method of withered germ of water-melon FonDCL1 deletion mutant body according to claim 3, special Sign is that the FonDCL1 deletion mutant body is identified by the following method:
Using the genomic DNA of transformant as template, four pairs of primers are designed for identifying FonDCL1 deletion mutant body, respectively It is upstream primer Fon1DCL1-LBCK/HPT-LBCK, downstream primer Fon1DCL1-RBCK/HPT-RBCK, for expanding HYG base Primer HYG-F/HYG-R, the FonDCL1 gene internal primers F on1DCL1-2193/Fon1DCL1-3030 of cause;
The nucleotide sequence of described primer HPT-LBCK, HPT-RBCK, Fon1DCL1-2193, Fon1DCL1-3030 are successively such as SEQ ID NO:15, SEQ ID NO:16, SEQ ID NO:17, shown in SEQ ID NO:18.
CN201810526655.0A 2018-05-29 2018-05-29 Withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction method Active CN108728369B (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CN201810526655.0A CN108728369B (en) 2018-05-29 2018-05-29 Withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction method

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN201810526655.0A CN108728369B (en) 2018-05-29 2018-05-29 Withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction method

Publications (2)

Publication Number Publication Date
CN108728369A CN108728369A (en) 2018-11-02
CN108728369B true CN108728369B (en) 2019-09-10

Family

ID=63935659

Family Applications (1)

Application Number Title Priority Date Filing Date
CN201810526655.0A Active CN108728369B (en) 2018-05-29 2018-05-29 Withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction method

Country Status (1)

Country Link
CN (1) CN108728369B (en)

Families Citing this family (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN110016519B (en) * 2019-04-30 2020-04-14 中国热带农业科学院环境与植物保护研究所 Banana fusarium wilt bacterium No. 4 physiological race DCL gene deletion mutant and small RNA thereof
CN113684173B (en) * 2021-09-28 2023-07-28 中国热带农业科学院热带作物品种资源研究所 Method for separating protoplast of watermelon fruit

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN103173358A (en) * 2011-12-23 2013-06-26 福建省农业科学院农业生物资源研究所 Preparation method of pathogenic bacteria protoplast of watermelon fusarium oxysporum
CN107299105A (en) * 2017-08-11 2017-10-27 河南省农业科学院园艺研究所 Watermelon blight bacteria pathogenic FonAGL3 genes, its missing DNA fragmentation, deletion mutant and its application
CN107365714A (en) * 2017-08-11 2017-11-21 河南省农业科学院园艺研究所 System formulates the method for different pathogenicity watermelon blight bacteria strains and the accurate authentication method of Watermelon Resistances To Fusarium Wilt

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN103173358A (en) * 2011-12-23 2013-06-26 福建省农业科学院农业生物资源研究所 Preparation method of pathogenic bacteria protoplast of watermelon fusarium oxysporum
CN107299105A (en) * 2017-08-11 2017-10-27 河南省农业科学院园艺研究所 Watermelon blight bacteria pathogenic FonAGL3 genes, its missing DNA fragmentation, deletion mutant and its application
CN107365714A (en) * 2017-08-11 2017-11-21 河南省农业科学院园艺研究所 System formulates the method for different pathogenicity watermelon blight bacteria strains and the accurate authentication method of Watermelon Resistances To Fusarium Wilt

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
hypothetical protein FOTG_07364 [Fusarium oxysporum f. sp. vasinfectum 25433];Ma,L.-J.;《GenBank: EXM26363.1》;20150318;全文 *

Also Published As

Publication number Publication date
CN108728369A (en) 2018-11-02

Similar Documents

Publication Publication Date Title
CN102316720B (en) Semen Maydis turns grows item 5307
CN107287235A (en) Lower the gene expression in insect pest
CN109385431B (en) Application of OsERF2 gene in regulation and control of rice grain size
CN112280791B (en) Barley stripe pathogenicity gene pgsln and application thereof
CN108728369B (en) Withered germ of water-melon RNAi component FonDCL1 deletion mutant body and its construction method
CN105154454A (en) Pathogenicity-related Botrytis cinerea gene BcArs2 and application thereof
CN113388526A (en) Endophytic fungus FO-R20 and application thereof
CN106520566B (en) One plant of Antagonistic Fungus for preventing and treating bitter gourd wilt and its application
CN113337521B (en) Application of knockout OsNAC78 gene in reduction of antioxidant enzyme activity of rice
Sun et al. Diaporthe phaseolorum var. caulivora, a causal agent for both stem canker and seed decay on soybean
CN104388448B (en) A kind of corn phospholipase A_2 gene ZmsPLA2-1 and its application
CN108531407B (en) Construction of strain incapable of producing aflatoxin and method for preventing and treating aflatoxin pollution
CN108795940A (en) A method of effectively preventing lepidoptera pest with RNAi
Hu et al. DNA methyltransferase implicated in the recovery of conidiation, through successive plant passages, in phenotypically degenerated Metarhizium
CN112812163A (en) Application of transcription factor in rice breeding and rice breeding method
CN109694876A (en) Cultivate the method for low Cd accumulation rice and its purposes of associated materials
CN114292759B (en) Fusarium oxysporum with function of preventing and treating tobacco continuous cropping obstacle
CN108559753B (en) Application of wheat stripe rust PSTG _17694 gene in stripe rust prevention and treatment and stripe rust resistant wheat cultivation method
CN103497958B (en) Rice Os Xrn4 gene and application thereof
CN115976051A (en) Potato StRTP7 gene and application thereof in disease-resistant breeding
CN103361368B (en) Cotton cytochrome P450 gene and application
CN108715855A (en) Withered germ of water-melon RNAi components FonAgo1 deletion mutants body and its construction method
Jiang et al. Quantitative trait loci for resistance to Sharp Eyespot (Rhizoctonia cerealis) in recombinant inbred wheat lines from the cross Niavt 14× Xuzhou 25
CN109161554B (en) Regulatory gene of rice dwarf fragile-stem mutant DBC1 and application thereof
CN106497943A (en) A kind of ash arrhizus bacteria gene BcSEP5 related to pathogenicity and its application

Legal Events

Date Code Title Description
PB01 Publication
PB01 Publication
SE01 Entry into force of request for substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant