CN107557479A - Microsatellite marker and application for Sepiella maindroni Parentage determination - Google Patents
Microsatellite marker and application for Sepiella maindroni Parentage determination Download PDFInfo
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- CN107557479A CN107557479A CN201710930753.6A CN201710930753A CN107557479A CN 107557479 A CN107557479 A CN 107557479A CN 201710930753 A CN201710930753 A CN 201710930753A CN 107557479 A CN107557479 A CN 107557479A
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- sepiella maindroni
- microsatellite marker
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Abstract
The invention discloses the microsatellite marker for Sepiella maindroni Parentage determination, also discloses that application of the microsatellite marker in Sepiella maindroni Parentage determination.Have the beneficial effect that:The microsatellite marker allele number for Sepiella maindroni Parentage determination that the present invention screens is more, and polymorphism is high, can be used for the population genetic variations of Sepiella maindroni, genetic thremmatology assessment and paternity test etc.;Nucleotides sequence is classified as SEQ ID No:1 19 microsatellite marker is used to identify Sepiella maindroni family, compensate for the limitation that genetic background is fuzzy, molecular labeling quantity is few in current Sepiella maindroni germplasm monitoring, and this method efficiency high, qualification cycle are short.
Description
Technical field
The invention belongs to field of molecular biotechnology, the microsatellite of Sepiella maindroni Parentage determination is especially for
Mark and application.
Background technology
Sepiella maindroni is commonly called as inkfish, Japanese sepiella maindroni de Rochebrune, is subordinate to Mollusca, Cephalopoda, Dibranchia, ten wrists
Mesh, cuttlefish superfamily, Sepiidae, sepiella maindroni de Rochebrune category, it is distributed more widely in China coast, once it was China's " one of four big marine products ", had
Higher economic value.With the breakthrough of Sepiella maindroni artificial breeding technique, the enhancement releasing of Sepiella maindroni and its
The protection and repair in spawning ground progressively deploy.Do not focus on select index, breeding environment and nature in long-term breeding process
The difference of environment, the problems such as causing cuttlefish sex premature, decline artificial farming Sepiella maindroni germ plasm resource, limit it and support
Grow the development of industry.Microsatellite DNA (microsatellite) is also known as simple repeated sequence, is distributed because it has extensively, single
The advantages that locus gene is in codominant inheritance, detection method fast and stable, there is obvious advantage in Parentage determination.
The content of the invention
It is an object of the invention to provide the microsatellite marker for Sepiella maindroni Parentage determination, the mark equipotential base
Factor mesh is more, and polymorphism is high, can be used for the population genetic variations of Sepiella maindroni, and genetic thremmatology is assessed and parent-offspring's mirror
It is fixed etc..
Another object of the present invention is to nucleotides sequence is classified as into SEQ ID No:1-19 microsatellite marker is used to identify
Purposes in Sepiella maindroni family, microsatellite sequence SEQ ID No:1-19 allele numbers are more, and polymorphism is high, makes up
The limitation that genetic background is fuzzy, molecular labeling quantity is few in current Sepiella maindroni germplasm monitoring, and this method efficiency high,
Qualification cycle is short.
The nucleotide sequence SEQ ID No of microsatellite marker:1-19 is as follows:
SEQ ID No:1 is:attacgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagtaaa
tctgtctgctgcaaagagcttgtcaaataaatttgttcatctttataagtgacgtttcaattgaactggcttcgatc
atcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcaggatttgttcttttatttt
gcgattttgaatacaagtggttctgttggaaactttgcagattaggatctcctgacaggctccagaactgacccaat
catgtgaaaaggctgatggattgttcggtgaagatcgtcatggatgagttcacaaatattttctaaattttccggct
ctctgctgatagcttttcgacttcaaccaatacatgactggccttgaaatgaggatctctctctcactcttccacac
acacacacacacacacacacaaatatccagtttgtgacaaagctttatcctatgccttagaacttgtcaagatattt
ggtaatgtaacaaaagtgacaatgaccctttgtacatgtagatttcatatttccttattcaaaaattgtggatgaga
aaatatatatcacctgaaagcagttcccagcatacaatctggtacaactgtgcttcatcttggaacgtcctaattgc
aatagaaaatgtgtaataaaaactgaaacaattactcaggactcatcaatcgtcgacctgcaggcatgcaagcttgg
cactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccc
cctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcg。
SEQ ID No:2 are:cgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagtaac
tgccagccgggtcacagttaggcattcaaacaccaactcgacattcaacgccagtctgaagacttggcattcaaacg
cgagtcgggtcggcacatcaaagaaagtttggcatcgcagaagacaatcagacccggacatattttcgcgaacaagt
cggcacaaaaggattctcaagtcaaagatagccacacccgtacacaccaggatctgaccaagtcgagaaccaagtac
agaaactcaaaaccggatcttcgcacacagagaacaaccgccgttctccgggttacacacgcctggcatatctcgtt
tcacacacacacacacacacacacacacacacacacacgcacacacacacacatatgtatacacacacatatctcta
cttatataaagttgctgtctctgtcattctgtttttctgtctgtttccattactcaggactcatcaatcgtcgacct
gcaggcatgcaagcttggcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaat
cgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagtt
gcgcagcctgaatggcgaatggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatat
ggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcg
ccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagag
gttttcaccgtcatcaccgaaacgcgcgagaacgaaagggcctcgtgatacgcctattt。
SEQ ID No:3 are:acgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagtaa
gtatgcacattacgggaatagcttgcaattcttcacacacacacacacacacacacacacacacacacacacacaca
cacactctctctctctctctccctctctctctctctctctgtgaaacacacatacaggaatacacatacgtgtatcg
gcgttggttgataatgatgttttatttgacctgcgatatacttttatattcgacgaattttgcgtagcagtaaatat
atactatttacatcattcgaactgttcttcccatctttgtcgtcatattcagaacaacgtttcggttgttgtacgct
ccagccttcttcggttggttggaatgtcgaactgaatcctttatatatctcattgaagtagtctgttctagttccac
gtgccatgccttttctgggtgtcaattaccagttatctcctgttactcaggactcatcaatcgtcgacctgcaggca
tgcaagcttggcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttg
cagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagc
ctgaatggcgaatggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcac
tctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgac
gggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttca
ccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgatacgccta。
SEQ ID No:4 are:tacgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagta
actcacaccgtcttttgcaagtgaacgttctcgcattcgcgcccgcaatccattctcgaacacgcagcgcaccacgt
gttgtttttttttgatggacgcggacgcacatcatcatcaacggtagtcgacagttcgttctgcttttcatttccgc
tacaataaggcatgtttgtgcgaataacatgcacgctctctctctctctctcactcatacacactctctctctctca
ctcactcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac
acacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaatcgcagta
ccccaggtcaagtgagtcagccacttactcaggactcatcactcgtcgacgtgcacgcatgcgagcgtgacactgtg
cgtcgtttacaacgtcgtgactggaaaaccgtgcgtaccaacttatcgcgtgcagcacatcccttcgcagctggcgt
atagcgagagccgcacgatcgccttccacagtgcgcagcgtgatgcgaatgcgctgatgcggatttctctcacgcat
ctgtgcggtattcacaccgcatatggtgcactctcagtacaatctgctctgatgcgcatagataagccagaccagaa
tcagcaacaccgctgacgcgccctgacgctgtctgtctgcatcgcatcgcggctgtacgttctgactgcatgttcga
gttcacg。
SEQ ID No:5 are:cgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagtaaa
gcggataaaattatatttatgtctgtatacccctcattaggggtattggttgatctggtctgtgtttgtttttgtgt
tttttttattgtttgtgtgttttctgtaagatacagccacttgctcaccgccgggaagtcgcctctctgtgcctctt
ttataagtactgtcacggcttctgttcggatgagctccgcactatggtccctagcgtgtacagattcaagcgcaata
ctcgtctagcagcgcgatctcatcaatttacagtcaagctggctagatgtaaccgcagtttctatgctaacagtttc
ttttcccgcacctccagattgtggaactcctcccggccttttgctttcctgacggcttcaacctgcaaaggttcaag
tgcaacgtcaatcgttacctgctctcttcgtaacccagtatacccttccttctgtaacccctagcatgcaagtggcg
ctcctgccttgcttggggtgactgattactcaggactcatcaatcgtcgacctgcaggcatgcaagcttggcactgg
ccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttc
gccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcg
cctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagtacaatctgct
ctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccg
gcatccgcttacagacagctgtgaccgtctccgggagctgcatgtgt。
SEQ ID No:6 are:gattacgaattcgagctcggtacccggggatcctctagagattgatgagtcctga
gtaaacataaaaatacataaacacacaattcatcttttcgcctccgatctttatcagatcagtgagcggaatgttcc
gttgttctttcgaaacattatatttttatcaactcttttccaattgtcaataatttataagtttgtcgggatcatat
acagaaatttatcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac
acacacacacacacacacacacacacacacatatatataaatatatatgcaaggctcaaatataagtaaacactgta
ataacatttacggtaatgccagattactcaggactcatcaatcgtcgacctgcaggcatgcaagcttggcactggcc
gtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgc
cagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgcc
tgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagtacaatctgctct
gatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggc
atccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcg
cgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggtttcttagacgtcaggt
ggcacttttcggggaaatgtgcgcggaacccctatttgtat。
SEQ ID No:7 are:attacgaattcgagctcggtacccggggatcctctagagattgatgagtcctgag
taaaaaagtaagtcattagaatgacactacgcaggtgacttttgaatctgtgatttacttgcaatttctcctcgaaa
gatattgacatgcgcatcaagatacacaagcaagtgaacagagctgaaattcgtctacaccctcacacacacacaca
cacacacacatacacacacatcagtcggaaaactgtgtgttgcatacccgtctctagatgtacgctcttctgtagag
ggggcatcttcttctagaggggggctggcaggacttctgctacgtacttcatctctctgactcaccaggccggacat
ctctcttttttatgcacagggaatatcacttttctgttctgatgttctgatgtccgaccagtagttgagacctgttg
cctcggccgtcttcttcataactccgcatgttgccttatcatgcagtatctccatcgtctcgtgatgaccccttctt
cggtgcatctttggtccaataaatgatgaccaacacaatattctatctaccttactcaggactcatcaatcgtcgac
ctgcaggcatgcaagcttggcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaactta
atcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacag
ttgcgcagcctgaatggcgaatggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcat
atggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacg
cgccctgacgggcttgtctgctcccggcatcc。
SEQ ID No:8 are:tgattacgaattcgagctcggtacccggggatcctctagagattgatgagtcctg
agtaatcagatttgccccttttgaatccatgtacatatgtttgtaaatacaatacgagaattatgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtaagcgtgtgcgtgcgtttccgttcctatctttttatcctttttcaatt
agttcactttcttatttccatctttctctctctctctttctctctctatctccctccccctctctctctctctcaat
ccctccctgtatctctctttcggttctcaactcttttcctatctcagttattccccacctttttctttctttcagtt
cctatttatttttatttttcagtttcttcgcttccaaatttctctgtccttcattatctctccccctttatttctct
ttctctctaactctcaacctctctatctatttgtctatcaatccttactcaggactcatcaatcgtcgacctgcagg
catgcaagcttggcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgcct
tgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgca
gcctgaatggcgaatggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgc
actctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctg
acgggcttgtctgctcccgggatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggtttt
caccgtc。
SEQ ID No:9 are:gattcgaattcgagctcggtacccggggatcctctagagattgatgagtcctgag
taacataaaattatttttgactgttcagtatctctcctcaagcctgttctgcaaacatttacacaaattcattgggt
atataattcagcactgtcctgagaaagacacacacacacacacacacacacacacacacacacacacacacacacac
acacacacacacacacacacacacacacacacactcacacacacacacacacacacacacacacacacacacacaca
cacacacacacacacacacacacacacacacacatgcacacacacacacacacacacacacacacacacacaccttc
ccacacacacacactctcacacacacgcacataccaatgggagttcccgacactttccccaacactcacagatccgg
cgctgcatgcgtgattttttgcttgtggtatctttttaataccactcgactgggaaagcactggcgttacagtctgt
tatggtgctgcataatttccccatttccgaggtggcgtaatagcgaagaggcgcgcactgatcgtgtttctcctcac
gtgatcagcttgtagggggaatgtgaccagatgcggtattttctcgtttcacatgtgtgcggcgttttcaacgacac
atggtgcactatcagaacactctgtactgatgtcttgaaggataaatgtcaccgacacacgggaatcctcgatgtca
cgcggtgttttgcgtgtgagcgcgcgcggcccccatatagtgcatattgtgaccgacacgtggagatgtgtgtgcga
tagtgatacaacgacctctcacgaaaagctcgagagtatagggcgacgtgagagtatctatatttttaggtttct。
SEQ ID No:10 are:attacgaattcgagctcggtacccggggatcctctagagattgatgagtcctga
gtaacacccacgagtcaggatatggcacatggccggtttatatgttgggaaattcaggcaaaaataatccgtatccc
cgcatacacggagtcggacttgtctaccaccccagtcgagactctacccttcggcacatcctcgactggattcctcc
ctgcccgaatgcaaggctgtcgcaagctatgcagcgaactgcctgacttgacaacagcctaagatctacgaatcaaa
caagtagttactaaagccacgacttgtaatgctaacgatcggaaattttatagttggggtggctgtcgtctgttata
atgtgtgtttgttgattttgggcgtatatattcataatctgtttcttttgttacgtagatggcgtctattccgtttg
actgtattcccttccttccaaaagcagtaggaatacataaaatacgtacgaacacacacgcacacacacacgcacac
acacacacacatactcagttttatggctatagatactttgaaaaaaaacataggtcatgatcttccactgactataa
gtaatattcaggtttgagaaaaatccatcgcaaacggtaggaatgcataaaatatatactaacacacacacacgcac
acacacatacacacacacacacatactcagtttactcaggactcatcaatcgtcgacctgcaggcatgcaagcttgg
cactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccc
cctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcga
atggcgcctgatgcggtattttctccttacgcatctgtgcgg。
SEQ ID No:11 are:acgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagta
acaaaatgtggaaacagtattacaatgagtataatgttcttcaagtctggtacttagatacatgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtaacccgatatgtctatcagtctagtgcggcattctctcgttctggtcagctcc
gcgtccgtggctgtctttgttgtaccgactatcctttactcaggactcatcaatcgtcgacctgcaggcatgcaagc
ttggcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcaca
tccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatg
gcgaatggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagt
acaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttg
tctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcat
caccgaaacgcgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggtttct
tagacgtcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatat
gtatccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagagtatgagtattcaacatt
tccgtgtcgcccttattcccttttttgcggcattttgccttcctg。
SEQ ID No:12 are:tacgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagt
aatatcagaaagaggcaactgaagtctctgggacatattatgagaaaggagggtctggaaaaccttatactcacagg
acggatagagggaggtagagacaggggaaaacaccgcacgacatacttgaagggcctgagcgaatggatgacgggaa
ggggcatgggagatacggggagtcaagccctgttgagagcttcgatagatagggggaagtggaaagccatgatagcc
tacgtcctgaagggatacggcacatagaagaagaatgtttcgatgatgaaggtctctttaggcggaattggcaaaca
ttatcccaacactttatttatacgcttgacaaaaggaaataaaaataaaacaaaaaacaaatcaaaataaagacgaa
aacaataacaacaacaacaaccactaacatggcactaaaggcgggggtctagaatttatggtgtggttactcaggac
tcatcaatcgtcgacctgcaggcatgcaagcttggcactggccgtcgttttacaacgtcgtgactgggaaaaccctg
gcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgat
cgcccttcccaacagttgcgcagcctgaatggcgaatggcgcctgatgcggtattttctccttacgcatctgtgcgg
tatttcacaccgcatatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgc
caacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccggg
agctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggtcc。
SEQ ID No:13 are:tacgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagt
aatatatctatcattcagttgtgtattttgactatctgttcttacaagtcttttcctgtttattcatctctcttcct
ttctctattactccaaccactctcttgctcacctcttttctttctctgcttactcactcactcactcattcacgcac
tcactcactcactcactcactcactcactcactcactcacgcactccgtttgtttctctctactttctccttctatt
tgtcttcacatttgatccaatatttccatttttttctagatttatatctctttatatgcttttgtcttacctccttt
tctctctttctctttctctccctatctctcttctttttctcctctctccttcactctctttttccctatcactttcc
aattttccttatttccatcaacctctatttctctcccttctctctttctttcgtctttctctcttctcacttctttt
ctcctcactacaatttctttttctttccctaattttttttctcttctcatctctctctttatctctccatctttcga
tttcttctcttttctacacgctctttttctctacttcattcatattttatttctcttctccacggtctctttctctg
cctacctcgctcattcttccctacttctttctttctcgcgctttattcttcactcactttttatcttttcctgtttt
tcttccttactcaggactcatcaatcgtcgacctgcaggcatgcaagcttggcactggccgtcgttttacaacgtcg
tgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcg
aagaggcccgcaccgatcgcccttcccaacagttgcgcag。
SEQ ID No:14 are:acgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagta
aggttctattcatagttgttccgttgaaaacgatcttcatttttcaagcgtgctgggcaaatggtgcgtctgctgtg
ttcactttttgcaaaagtgggatcacagctaacaccagaatatctttctttccttgccattcggttttttcttttgc
catttttactacaattttttgtgattttccatttcctcattattatctcttctagagttgtgccacacacacacaca
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatgagagagtga
ggttttctcattactcaggactcatcacacacacacacacacacacacacacacacacacacacacacacacacaca
tacacacatacaagaaagagacatattcacaattactcaggactcatcaatcgtcgacctgcaggcatgcaagcttg
gcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatcc
ccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcg
aatggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagtaca
atctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtct
gctcccggcatccgcttacagacaagctgtgaccgtctccggggagctgcatgtgtcagaggttttcaccgtcatca
ccgaaacgcgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtc。
SEQ ID No:15 are:cgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagtaa
gttaacgaagtgaaaacaagtgttgcgagccgatgtatgcattttccccaacttgttgcaggcgttagaaacgtcga
agtttgagttgaaaaataacacgctgtctcctgtaatgcccacagaacacatggatgtcttgctcgtgtgtccgcca
tgatgaaatacaaagaaataacaagcaccaataaaaacctacaaacaaataaatatgtattgacaataaagatatac
gagatataagtaacaaatgaatgtgaaaatcatttagggtttcaaagtatgtggactgtggagtgagtgaatgtgtg
tacgtacgtacgggtatgtatgtgtgtgtgagtgtgtgtttactcaggactcatcaatcgtcgacctgcaggcatgc
aagcttggcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcag
cacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctg
aatggcgaatggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactct
cagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacggg
cttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccg
tcatcaccgaaacgcgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggt
ttcttagacgtcaggtggcacttttcggggaaatgtgcgcggaacccctatttg。
SEQ ID No:16 are:cgaattcgagctcggtacccggggatcctctagagattgatgagtcctgagtaa
atgcagaatccaacaatagttagctcctcattatttagaaaatgtccttttggggtgctaacggcccctataaataa
gtggtcactcatgacccaacttctttttacctgtctttctacacaacatccaagatgtaagatcaggctcacagaaa
gcatgcttgcatgcaccacatgctcacaaagacacctttatcctctctcaagacacacacccaaaacatgaacttgt
gcaaaagaaacgtgcgctcgtgtgcactcactagcactcattcatgcatgcacacacacacacacacacacacacac
ttagcatccatttcagatccacggtaatattttaggggtcctaatagctaattctttataactgagaattgcaattc
ctacagtaatgtacgccatattactcaggactcatcaatcgtcgacctgcaggcatgcaagcttggcactggccgtc
gttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccag
ctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgcctga
tgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagtacaatctgctctgat
gccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatc
cgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcga
gacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatgg。
SEQ ID No:17 are:tacgaattcgagctcggtacccggggatcctctagagattatgacttggataaa
aaatatcaaagtattgtaaataataatggtaaaactaaaatgaataacgataattgttattggagtccgattagaaa
aagttcacttggtcggaacggatgaattgatatagatgaaagcagaaaaacaggagaggaaatgatgagattaggag
gtgtaaaaataaaagatgataagtccgaaagcaactaagcgaattttatgcataataaaacagaaagggagcattac
tcaggactcatcaatcgtcgacctgcaggcatgcaagcttggcactggccgtcgttttacaacgtcgtgactgggaa
aaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccg
caccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgcctgatgcggtattttctccttacgcatc
tgtgcggtatttcacaccgcatatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccga
cacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgt
ctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgatacgcc
tatttttataggttaatgtcatgataataatggtttcttagacgtcaggtggcacttttcggggaaatgtgcgcgga
acccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgcttca
ataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgccctat。
SEQ ID No:18 are:attacgaattcgagctcggtacccggggatcctctagagattgatgagtcctga
gtaaaagccccccacacacacacacacacgcacacactgcgaaactccataacgttttcatttcgtacacattcaca
caattacaatttatttttctttcactcgcttgactctctctctctctctttctttccctctttctctctctctctct
ctatttctctctctctcacacacacacatgtacacaggcatgcattctctctctctttttctctctttctctctttc
acactttctcactcactcactcactcactcactcactcactcactcactcaccctctttctcttcctcagcatattg
ctgctgccaccaattctacagaacgagttagtagcattagtagtcttgctgcttgttgttagtgttgagattggagt
ccgtaatccacaaaacggctccagttcgcaaattccttttttcttcccttccgttagaagttacttttattagcata
ttttagaaacttttataataacccatcgcttactcaggactcatcaatcgtcgacctgcaggcatgcaagcttggca
ctggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccc
tttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaat
ggcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagtacaatc
tgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgct
cccggcatccgcttacagacaagctgtgaccgtctccc。
SEQ ID No:19 are:atgattacgaattcgagctcggtacccggggatcctctagagattgatgagtcc
tgagtaacgtggggaatccaagctcatacactcggactgaggacaaaaattcctcgagccctcgcaaccgtcggttt
cactgtcctctgggcgaagtcagagacgcaaataataaaaccttacccggctgatgacaggttattatacatacata
catatatgtgtgtgtgtgtgtatgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaacgtatgcaatcgcttattatgaaagcga
atattggctgcgtctattcgagtaatcacatttgtctattcaccatgacgccgttctaatcgtggggagtgaacttg
cattacgtaaattgtttattactttccctcagatatgctttctgtcgtgcaaatataaggcatcactcgtctgcaga
ttttactcaggactcatcaatcgtcgacctgcaggcatgcaagcttggcactggccgtcgttttacaacgtcgtgac
tgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaaga
ggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgcctgatgcggtattttctcctta
cgcatctgtgcggtatttcacaccgcatatggtgcactctcagtacaatctgctctgatgccgcatagttaagccag
ccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgt
gaccgtc。
The present invention is directed to the problem of being mentioned in background technology, and the technical scheme taken is:For Sepiella maindroni family
The microsatellite marker of identification, the nucleotides sequence of the microsatellite marker are classified as SEQ ID No:1-19.The mark has highly polymorphic
Property, and stability is high, is provided for the Population Genetics of Sepiella maindroni, Parentage determination and molecular mark technology
Effective instrument.
Preferably, the screening technique for the microsatellite marker of Sepiella maindroni Parentage determination includes genomic DNA
Extraction, the preparation of connection product, the amplification of connection product, strepavidin magnetic beads catch, the amplification of target DNA fragment, microsatellite
The acquisition of mark.Method is simple, easily operated, and paramagnetic particle method substantially increases the bioaccumulation efficiency of repetitive sequence, is microsatellite mark
The screening of note provides good condition.
Preferably, in the extraction process of genomic DNA, Sepiella maindroni genomic DNA is extracted, with restriction enzyme Mbol
By genomic DNA at 37 DEG C digestion 3h, reclaim 400-1000bp DNA fragmentations.Under the conditions of being somebody's turn to do, 400- in digestion products
The DNA fragmentation concentration of 1000bp sizes is high, improves the utilization rate of Sepiella maindroni.
Preferably, in the preparation process of connection product, by joint A (5'-GATCGTCGACGGTACCGAATTCT-3',
SEQ ID No:And joint B (5'-GTCAAGAATTCGGTACCGTCGAC-3', SEQ ID No 20):21) equal proportion mixes,
Continue 10min at 95 DEG C, be then connected with digestion recovery DNA fragmentation, obtain connection product.Joint is connected to Sepiella maindroni
DNA fragmentation, for the DNA fragmentation provide one section known to sequence, be very easy to the amplification of connection product.
Preferably, in the amplification procedure of connection product, using connection product as template, performing PCR is entered as primer using joint B and expanded
Increase, PCR amplification system is:5 10 × buffer of μ L, 4 μ L dNTP, 2U Taq polymerases, 2 μ L joints B, 2 μ L template DNAs, add
Aqua sterilisa is to the μ L of final volume 50;PCR amplification conditions are:94 DEG C of pre-degeneration 2min, 94 DEG C of denaturation 30s, 55 DEG C of annealing 30s, 72 DEG C
Extend 30s, expand 30 circulations, last 72 DEG C of extensions 7min.Under the conditions of being somebody's turn to do, Taq polymerase activity is high, and target sequence denaturation is thorough
Bottom, effective amplification amount can be reached.
Preferably, in strepavidin magnetic beads capture-process, the amplified production and biotinylated probes (CA) 12 of connection product are taken
(20mmol/L)Mixing, 5min first is denatured at 95 DEG C, then hybridizes 60min at 65 DEG C, add the magnetic bead for being coated with streptomysin, mixed
30min is closed, after magnetic bead adsorbs, magnetic bead is fixed with magnetic frame, removes hybrid mixed liquid.DNA magnetic bead has been adsorbed in magnetic field
Under the conditions of can assemble or disperse, avoid the flows hand-manipulated such as centrifugation, improve the automation journeys of DNA purge processes
Degree.
Preferably, in the amplification procedure of elution fragment, magnetic bead is mixed with TE buffer solutions, in 95 DEG C of water-bath 5min, treated
After magnetic frame fixes magnetic bead, magnet stand is separated, the supernatant containing microsatellite DNA fragment is obtained, using the supernatant as template, to connect
Head B is primer, enters performing PCR amplification, and PCR amplification system is:5 10 × buffer of μ L, 4 μ L dNTP, 2U Taq polymerases, 2 μ L
Joint B, 2 μ L template DNAs, add aqua sterilisa to the μ L of final volume 50;PCR amplification conditions are:94 DEG C of pre-degeneration 2min, 94 DEG C of denaturation
30s, 55 DEG C of annealing 30s, 72 DEG C of extension 30s, expands 30 circulations, last 72 DEG C of extensions 7min.Pcr amplification product is purified, is connect
And be connected with pMD18-T carriers, convert DH5 α competent cells, be coated on the LB containing IPTG, X-Gal and ampicillin and put down
Plate, 37 DEG C of overnight incubations, enter performing PCR amplification, detection by template of bacterium solution, picking part clone serves the survey of Hai Ying fine horses biotech firm
Sequence, obtain microsatellite sequence.Sequence to be measured is cloned on carrier and is sequenced, the template amount obtained is big, and purity is high, improves sequencing
Efficiency and the degree of accuracy.
Preferably, in the acquisition process of microsatellite marker, designed according to the flanking sequence at sequencing gained microsatellite both ends
Primer, design of primers condition are:G/C content is 40%-60%, and annealing temperature is 48-60 DEG C, primer length 18bp-24bp, right
The 5' ends of primer are modified with FAM, and Bing carries out pcr amplification reaction by template of Sepiella maindroni genomic DNA, by 5 μ L 10 ×
Buffer, 4 μ L dNTP, 2U Taq polymerases, 2 μ L sense primers, 2 μ L anti-sense primers, the mixing of 2 μ L template DNAs, add aqua sterilisa
To the μ L of final volume 50, by mixture in 95 DEG C of pre-degeneration 5min, followed by 35 circulations, each circulation include 94 DEG C of denaturation 45s,
57 DEG C of annealing 45s, 72 DEG C of extension 1min, are placed in 72 DEG C of extension 10min again after the completion of circulation.Each PCR primer is poly- in 6% denaturation
Each primer polymorphism is detected on acrylamide gel, filter out the amplification of non-specific band less, result it is stable, rich polymorphism
Microsatellite marker 20, its nucleotide sequence is as shown in SEQ ID No.1 to SEQ ID No.20.Pass through the special of fluorescence labeling
Property probe PCR primer is marked tracking, greatly simplifies the process of quantitative detection, and automation process is reproducible,
High sensitivity, high specificity, as a result clearly.
Compared with prior art, the advantage of the invention is that:What the present invention screened is used for Sepiella maindroni Parentage determination
Microsatellite marker allele number it is more, polymorphism is high, can be used for the population genetic variations of Sepiella maindroni, heredity
Thremmatology assessment and paternity test etc.;Nucleotides sequence is classified as SEQ ID No:1-19 microsatellite marker be used for identify Man without
Sepia andreana family, the limitation that genetic background is fuzzy, molecular labeling quantity is few in current Sepiella maindroni germplasm monitoring is compensate for,
And this method efficiency high, qualification cycle are short.
Embodiment
Below by embodiment, the present invention will be further described:
Embodiment 1:
For the microsatellite marker of Sepiella maindroni Parentage determination, the nucleotides sequence of the microsatellite marker is classified as SEQ ID No:
1-19, its screening technique comprise the following steps:
1) extraction of genomic DNA:Sepiella maindroni genomic DNA is extracted, with restriction enzyme Mbol by genomic DNA at 37 DEG C
Lower digestion 3h, reclaim 400-1000bp DNA fragmentations.Under the conditions of being somebody's turn to do, the DNA fragmentation of 400-1000bp sizes is dense in digestion products
Degree is high, improves the utilization rate of Sepiella maindroni;
2) preparation of connection product:By joint A (5'-GATCGTCGACGGTACCGAATTCT-3') and joint B (5'-
GTCAAGAATTCGGTACCGTCGAC-3') equal proportion is mixed, and makes final concentration of 25 μm of ol/L, and 10min, cooling are incubated at 95 DEG C
To room temperature, then it is connected with digestion recovery DNA fragmentation at 15 DEG C, obtains connection product.Joint is connected to Sepiella maindroni DNA
Fragment, for the DNA fragmentation provide one section known to sequence, be very easy to the amplification of connection product;
3) amplification of connection product:Using connection product as template, enter performing PCR amplification by primer of joint B, PCR amplification system is:
5 10 × buffer of μ L, 4 μ L dNTP, 2U Taq polymerases, 2 μ L joints B, 2 μ L template DNAs, add aqua sterilisa to the μ of final volume 50
L;PCR amplification conditions are:94 DEG C of pre-degeneration 2min, 94 DEG C of denaturation 30s, 55 DEG C of annealing 30s, 72 DEG C of extension 30s, expand 30 and follow
Ring, last 72 DEG C of extensions 7min.Under the conditions of being somebody's turn to do, Taq polymerase activity is high, and target sequence denaturation is thorough, can reach effective expansion
Increment;
4) strepavidin magnetic beads are caught:Take 25 μ L pcr amplification products and 5 μ L biotinylated probes (CA) 12(20mmol/L)Hybridization,
Hybridization solution is 6 × SSC+0.1%SDS, and cumulative volume is 100 μ L, is first denatured 5min at 95 DEG C, then hybridizes 60min at 65 DEG C,
The magnetic bead for being coated with streptomysin is added, 30min is mixed, after magnetic bead adsorbs, fixes magnetic bead with magnetic frame, remove hybrid mixed
Liquid.Having adsorbed DNA magnetic bead can assemble or disperse under magnetic field condition, avoid the flows hand-manipulated such as centrifugation, carry
The high automaticity of DNA purge processes;
5) amplification of fragment is eluted:Magnetic bead is mixed with TE buffer solutions, in 95 DEG C of water-bath 5min, after magnetic frame fixes magnetic bead,
Magnet stand is separated, the supernatant containing microsatellite DNA fragment is obtained, using the supernatant as template, using joint B as primer, enters performing PCR
Amplification, PCR amplification system are:5 10 × buffer of μ L, 4 μ L dNTP, 2U Taq polymerases, 2 μ L joints B, 2 μ L template DNAs,
Add aqua sterilisa to the μ L of final volume 50;PCR amplification conditions are:94 DEG C of pre-degenerations 2min, 94 DEG C of denaturation 30s, 55 DEG C of 30s that anneal, 72
DEG C extension 30s, expand 30 circulation, it is last 72 DEG C extension 7min.Pcr amplification product is purified, is then connected with pMD18-T carriers
Connect, convert DH5 α competent cells, be coated on the LB flat boards containing IPTG, X-Gal and ampicillin, 37 DEG C of overnight incubations,
Enter performing PCR amplification, detection by template of bacterium solution, picking part clone serves the sequencing of Hai Ying fine horses biotech firm, obtains microsatellite sequence.
Sequence to be measured is cloned on carrier and is sequenced, the template amount obtained is big, and purity is high, improves efficiency and the degree of accuracy of sequencing;
6) acquisition of microsatellite marker:Primer, design of primers condition are designed according to the flanking sequence at sequencing gained microsatellite both ends
For:G/C content is 40%-60%, and annealing temperature is 48-60 DEG C, primer length 18bp-24bp, and the 5' ends of primer are repaiied with FAM
Decorations, Bing using Sepiella maindroni genomic DNA be template progress pcr amplification reaction, by 5 10 × buffer of μ L, 4 μ L dNTP,
2U Taq polymerases, 2 μ L sense primers, 2 μ L anti-sense primers, the mixing of 2 μ L template DNAs, add aqua sterilisa to the μ L of final volume 50, will be mixed
Compound is in 95 DEG C of pre-degeneration 5min, followed by 35 circulations, and each circulation includes 94 DEG C of denaturation 45s, 57 DEG C of 45s that anneal, 72 DEG C
Extend 1min, be placed in 72 DEG C of extension 10min after the completion of circulation again.Each PCR primer is examined on 6% denaturing polyacrylamide gel
Survey each primer polymorphism, filter out the amplification of non-specific band less, result is stable, the microsatellite marker 20 of rich polymorphism,
Its nucleotide sequence is as shown in SEQ ID No.1 to SEQ ID No.20.By the specific probe of fluorescence labeling to PCR primer
Tracking is marked, greatly simplifies the process of quantitative detection, and automation process is reproducible, high sensitivity, specificity
By force, as a result clearly.
Embodiment 2:
Nucleotides sequence is classified as SEQ ID No:Application of the 1-19 microsatellite marker in Sepiella maindroni Parentage determination, including
Following steps:
1) FAM marks are carried out to the 5' ends of primer designed by the step 6) of embodiment 1;
2) extract the genomic DNA of Sepiella maindroni, extracted DNA expanded with the primer in step 1), by 5 μ L 10 ×
Buffer, 4 μ L dNTP, 2U Taq polymerases, 2 μ L sense primers, 2 μ L anti-sense primers, the mixing of 2 μ L template DNAs, add aqua sterilisa
To the μ L of final volume 50,0.1 μ L diphenyl-bromomethanes and 0.1 μ L3- methyl benzophenones are added, by mixture in 95 DEG C of pre- changes
Property 5min, followed by 35 circulations, each circulation include 94 DEG C of denaturation 45s, 57 DEG C of annealing 45s, and 72 DEG C extend 1min, have circulated
Cheng Houzai is placed in 72 DEG C of extension 10min.Under the conditions of being somebody's turn to do, Taq polymerase activity is high, and target sequence denaturation is thorough, can reach effective
Amplification amount;Added diphenyl-bromomethane, 3- methyl benzophenones and buffer have synergy, make Taq polymerase active
The site in region is mutated, and realizes the modification to enzyme gene, improves specificity, expression quantity and the enzyme of Taq polymerase
Vigor, the efficiency of amplification is greatly improved, shorten the cycle of Parentage determination;
3) pcr amplification product is gone into electropherotyping in polyacrylamide denaturant gel, taken pictures after cma staining, and
The genotype data of every cuttlefish is obtained using software Gel-Pro Analyzer`4.5, it is each using PopGen32 software statistics
The gene frequency (P) of microsatellite marker locus, number of alleles (Na), effective number of allele (Ne), observation heterozygosis
(Ho) is spent, heterozygosity (He) it is expected, breathes out moral Weinberg equilibrium PHW, calculate polymorphism information content PIC.
Embodiment of above is merely to illustrate the present invention, and not limitation of the present invention, the ordinary skill people of this area
Member, without departing from the spirit and scope of the present invention, it can also make a variety of changes and modification.Therefore, it is all equivalent
Technical scheme fall within scope of the invention, scope of patent protection of the invention should be defined by the claims.
Sequence table
<110>Zhejiang Ocean university
<120>Microsatellite marker and application for Sepiella maindroni Parentage determination
<160> 21
<170> SIPOSequenceListing 1.0
<210> 1
<211> 891
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 1
attacgaatt cgagctcggt acccggggat cctctagaga ttgatgagtc ctgagtaaat 60
ctgtctgctg caaagagctt gtcaaataaa tttgttcatc tttataagtg acgtttcaat 120
tgaactggct tcgatcatca tcatcatcat catcatcatc atcatcatca tcatcatcat 180
catcatcatc atcaggattt gttcttttat tttgcgattt tgaatacaag tggttctgtt 240
ggaaactttg cagattagga tctcctgaca ggctccagaa ctgacccaat catgtgaaaa 300
ggctgatgga ttgttcggtg aagatcgtca tggatgagtt cacaaatatt ttctaaattt 360
tccggctctc tgctgatagc ttttcgactt caaccaatac atgactggcc ttgaaatgag 420
gatctctctc tcactcttcc acacacacac acacacacac acacaaatat ccagtttgtg 480
acaaagcttt atcctatgcc ttagaacttg tcaagatatt tggtaatgta acaaaagtga 540
caatgaccct ttgtacatgt agatttcata tttccttatt caaaaattgt ggatgagaaa 600
atatatatca cctgaaagca gttcccagca tacaatctgg tacaactgtg cttcatcttg 660
gaacgtccta attgcaatag aaaatgtgta ataaaaactg aaacaattac tcaggactca 720
tcaatcgtcg acctgcaggc atgcaagctt ggcactggcc gtcgttttac aacgtcgtga 780
ctgggaaaac cctggcgtta cccaacttaa tcgccttgca gcacatcccc ctttcgccag 840
ctggcgtaat agcgaagagg cccgcaccga tcgcccttcc caacagttgc g 891
<210> 2
<211> 961
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 2
cgaattcgag ctcggtaccc ggggatcctc tagagattga tgagtcctga gtaactgcca 60
gccgggtcac agttaggcat tcaaacacca actcgacatt caacgccagt ctgaagactt 120
ggcattcaaa cgcgagtcgg gtcggcacat caaagaaagt ttggcatcgc agaagacaat 180
cagacccgga catattttcg cgaacaagtc ggcacaaaag gattctcaag tcaaagatag 240
ccacacccgt acacaccagg atctgaccaa gtcgagaacc aagtacagaa actcaaaacc 300
ggatcttcgc acacagagaa caaccgccgt tctccgggtt acacacgcct ggcatatctc 360
gtttcacaca cacacacaca cacacacaca cacacacaca cgcacacaca cacacatatg 420
tatacacaca catatctcta cttatataaa gttgctgtct ctgtcattct gtttttctgt 480
ctgtttccat tactcaggac tcatcaatcg tcgacctgca ggcatgcaag cttggcactg 540
gccgtcgttt tacaacgtcg tgactgggaa aaccctggcg ttacccaact taatcgcctt 600
gcagcacatc cccctttcgc cagctggcgt aatagcgaag aggcccgcac cgatcgccct 660
tcccaacagt tgcgcagcct gaatggcgaa tggcgcctga tgcggtattt tctccttacg 720
catctgtgcg gtatttcaca ccgcatatgg tgcactctca gtacaatctg ctctgatgcc 780
gcatagttaa gccagccccg acacccgcca acacccgctg acgcgccctg acgggcttgt 840
ctgctcccgg catccgctta cagacaagct gtgaccgtct ccgggagctg catgtgtcag 900
aggttttcac cgtcatcacc gaaacgcgcg agaacgaaag ggcctcgtga tacgcctatt 960
t 961
<210> 3
<211> 950
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 3
acgaattcga gctcggtacc cggggatcct ctagagattg atgagtcctg agtaagtatg 60
cacattacgg gaatagcttg caattcttca cacacacaca cacacacaca cacacacaca 120
cacacacaca cacacactct ctctctctct ctccctctct ctctctctct ctgtgaaaca 180
cacatacagg aatacacata cgtgtatcgg cgttggttga taatgatgtt ttatttgacc 240
tgcgatatac ttttatattc gacgaatttt gcgtagcagt aaatatatac tatttacatc 300
attcgaactg ttcttcccat ctttgtcgtc atattcagaa caacgtttcg gttgttgtac 360
gctccagcct tcttcggttg gttggaatgt cgaactgaat cctttatata tctcattgaa 420
gtagtctgtt ctagttccac gtgccatgcc ttttctgggt gtcaattacc agttatctcc 480
tgttactcag gactcatcaa tcgtcgacct gcaggcatgc aagcttggca ctggccgtcg 540
ttttacaacg tcgtgactgg gaaaaccctg gcgttaccca acttaatcgc cttgcagcac 600
atcccccttt cgccagctgg cgtaatagcg aagaggcccg caccgatcgc ccttcccaac 660
agttgcgcag cctgaatggc gaatggcgcc tgatgcggta ttttctcctt acgcatctgt 720
gcggtatttc acaccgcata tggtgcactc tcagtacaat ctgctctgat gccgcatagt 780
taagccagcc ccgacacccg ccaacacccg ctgacgcgcc ctgacgggct tgtctgctcc 840
cggcatccgc ttacagacaa gctgtgaccg tctccgggag ctgcatgtgt cagaggtttt 900
caccgtcatc accgaaacgc gcgagacgaa agggcctcgt gatacgccta 950
<210> 4
<211> 909
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 4
tacgaattcg agctcggtac ccggggatcc tctagagatt gatgagtcct gagtaactca 60
caccgtcttt tgcaagtgaa cgttctcgca ttcgcgcccg caatccattc tcgaacacgc 120
agcgcaccac gtgttgtttt tttttgatgg acgcggacgc acatcatcat caacggtagt 180
cgacagttcg ttctgctttt catttccgct acaataaggc atgtttgtgc gaataacatg 240
cacgctctct ctctctctct cactcataca cactctctct ctctcactca ctcacacaca 300
cacacacaca cacacacaca cacacacaca cacacacaca cacacacaca cacacacaca 360
cacacacaca cacacacaca cacacacaca cacacacaca cacacacaca cacacacaca 420
cacacacaca cacacacaca cacacacaca cacacacaca cacacacaca cacacacaca 480
cacacacaca cacacacaca cacacacaat cgcagtaccc caggtcaagt gagtcagcca 540
cttactcagg actcatcact cgtcgacgtg cacgcatgcg agcgtgacac tgtgcgtcgt 600
ttacaacgtc gtgactggaa aaccgtgcgt accaacttat cgcgtgcagc acatcccttc 660
gcagctggcg tatagcgaga gccgcacgat cgccttccac agtgcgcagc gtgatgcgaa 720
tgcgctgatg cggatttctc tcacgcatct gtgcggtatt cacaccgcat atggtgcact 780
ctcagtacaa tctgctctga tgcgcataga taagccagac cagaatcagc aacaccgctg 840
acgcgccctg acgctgtctg tctgcatcgc atcgcggctg tacgttctga ctgcatgttc 900
gagttcacg 909
<210> 5
<211> 949
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 5
cgaattcgag ctcggtaccc ggggatcctc tagagattga tgagtcctga gtaaagcgga 60
taaaattata tttatgtctg tatacccctc attaggggta ttggttgatc tggtctgtgt 120
ttgtttttgt gtttttttta ttgtttgtgt gttttctgta agatacagcc acttgctcac 180
cgccgggaag tcgcctctct gtgcctcttt tataagtact gtcacggctt ctgttcggat 240
gagctccgca ctatggtccc tagcgtgtac agattcaagc gcaatactcg tctagcagcg 300
cgatctcatc aatttacagt caagctggct agatgtaacc gcagtttcta tgctaacagt 360
ttcttttccc gcacctccag attgtggaac tcctcccggc cttttgcttt cctgacggct 420
tcaacctgca aaggttcaag tgcaacgtca atcgttacct gctctcttcg taacccagta 480
tacccttcct tctgtaaccc ctagcatgca agtggcgctc ctgccttgct tggggtgact 540
gattactcag gactcatcaa tcgtcgacct gcaggcatgc aagcttggca ctggccgtcg 600
ttttacaacg tcgtgactgg gaaaaccctg gcgttaccca acttaatcgc cttgcagcac 660
atcccccttt cgccagctgg cgtaatagcg aagaggcccg caccgatcgc ccttcccaac 720
agttgcgcag cctgaatggc gaatggcgcc tgatgcggta ttttctcctt acgcatctgt 780
gcggtatttc acaccgcata tggtgcactc tcagtacaat ctgctctgat gccgcatagt 840
taagccagcc ccgacacccg ccaacacccg ctgacgcgcc ctgacgggct tgtctgctcc 900
cggcatccgc ttacagacag ctgtgaccgt ctccgggagc tgcatgtgt 949
<210> 6
<211> 943
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 6
gattacgaat tcgagctcgg tacccgggga tcctctagag attgatgagt cctgagtaaa 60
cataaaaata cataaacaca caattcatct tttcgcctcc gatctttatc agatcagtga 120
gcggaatgtt ccgttgttct ttcgaaacat tatattttta tcaactcttt tccaattgtc 180
aataatttat aagtttgtcg ggatcatata cagaaattta tcacacacac acacacacac 240
acacacacac acacacacac acacacacac acacacacac acacacacac acacacacac 300
acacacacac acacacatat atataaatat atatgcaagg ctcaaatata agtaaacact 360
gtaataacat ttacggtaat gccagattac tcaggactca tcaatcgtcg acctgcaggc 420
atgcaagctt ggcactggcc gtcgttttac aacgtcgtga ctgggaaaac cctggcgtta 480
cccaacttaa tcgccttgca gcacatcccc ctttcgccag ctggcgtaat agcgaagagg 540
cccgcaccga tcgcccttcc caacagttgc gcagcctgaa tggcgaatgg cgcctgatgc 600
ggtattttct ccttacgcat ctgtgcggta tttcacaccg catatggtgc actctcagta 660
caatctgctc tgatgccgca tagttaagcc agccccgaca cccgccaaca cccgctgacg 720
cgccctgacg ggcttgtctg ctcccggcat ccgcttacag acaagctgtg accgtctccg 780
ggagctgcat gtgtcagagg ttttcaccgt catcaccgaa acgcgcgaga cgaaagggcc 840
tcgtgatacg cctattttta taggttaatg tcatgataat aatggtttct tagacgtcag 900
gtggcacttt tcggggaaat gtgcgcggaa cccctatttg tat 943
<210> 7
<211> 934
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 7
attacgaatt cgagctcggt acccggggat cctctagaga ttgatgagtc ctgagtaaaa 60
aagtaagtca ttagaatgac actacgcagg tgacttttga atctgtgatt tacttgcaat 120
ttctcctcga aagatattga catgcgcatc aagatacaca agcaagtgaa cagagctgaa 180
attcgtctac accctcacac acacacacac acacacacat acacacacat cagtcggaaa 240
actgtgtgtt gcatacccgt ctctagatgt acgctcttct gtagaggggg catcttcttc 300
tagagggggg ctggcaggac ttctgctacg tacttcatct ctctgactca ccaggccgga 360
catctctctt ttttatgcac agggaatatc acttttctgt tctgatgttc tgatgtccga 420
ccagtagttg agacctgttg cctcggccgt cttcttcata actccgcatg ttgccttatc 480
atgcagtatc tccatcgtct cgtgatgacc ccttcttcgg tgcatctttg gtccaataaa 540
tgatgaccaa cacaatattc tatctacctt actcaggact catcaatcgt cgacctgcag 600
gcatgcaagc ttggcactgg ccgtcgtttt acaacgtcgt gactgggaaa accctggcgt 660
tacccaactt aatcgccttg cagcacatcc ccctttcgcc agctggcgta atagcgaaga 720
ggcccgcacc gatcgccctt cccaacagtt gcgcagcctg aatggcgaat ggcgcctgat 780
gcggtatttt ctccttacgc atctgtgcgg tatttcacac cgcatatggt gcactctcag 840
tacaatctgc tctgatgccg catagttaag ccagccccga cacccgccaa cacccgctga 900
cgcgccctga cgggcttgtc tgctcccggc atcc 934
<210> 8
<211> 909
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 8
tgattacgaa ttcgagctcg gtacccgggg atcctctaga gattgatgag tcctgagtaa 60
tcagatttgc cccttttgaa tccatgtaca tatgtttgta aatacaatac gagaattatg 120
tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg taagcgtgtg cgtgcgtttc 180
cgttcctatc tttttatcct ttttcaatta gttcactttc ttatttccat ctttctctct 240
ctctctttct ctctctatct ccctccccct ctctctctct ctcaatccct ccctgtatct 300
ctctttcggt tctcaactct tttcctatct cagttattcc ccaccttttt ctttctttca 360
gttcctattt atttttattt ttcagtttct tcgcttccaa atttctctgt ccttcattat 420
ctctccccct ttatttctct ttctctctaa ctctcaacct ctctatctat ttgtctatca 480
atccttactc aggactcatc aatcgtcgac ctgcaggcat gcaagcttgg cactggccgt 540
cgttttacaa cgtcgtgact gggaaaaccc tggcgttacc caacttaatc gccttgcagc 600
acatccccct ttcgccagct ggcgtaatag cgaagaggcc cgcaccgatc gcccttccca 660
acagttgcgc agcctgaatg gcgaatggcg cctgatgcgg tattttctcc ttacgcatct 720
gtgcggtatt tcacaccgca tatggtgcac tctcagtaca atctgctctg atgccgcata 780
gttaagccag ccccgacacc cgccaacacc cgctgacgcg ccctgacggg cttgtctgct 840
cccgggatcc gcttacagac aagctgtgac cgtctccggg agctgcatgt gtcagaggtt 900
ttcaccgtc 909
<210> 9
<211> 900
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 9
gattcgaatt cgagctcggt acccggggat cctctagaga ttgatgagtc ctgagtaaca 60
taaaattatt tttgactgtt cagtatctct cctcaagcct gttctgcaaa catttacaca 120
aattcattgg gtatataatt cagcactgtc ctgagaaaga cacacacaca cacacacaca 180
cacacacaca cacacacaca cacacacaca cacacacaca cacacacaca cacacacaca 240
cactcacaca cacacacaca cacacacaca cacacacaca cacacacaca cacacacaca 300
cacacacaca cacacacaca tgcacacaca cacacacaca cacacacaca cacacacacc 360
ttcccacaca cacacactct cacacacacg cacataccaa tgggagttcc cgacactttc 420
cccaacactc acagatccgg cgctgcatgc gtgatttttt gcttgtggta tctttttaat 480
accactcgac tgggaaagca ctggcgttac agtctgttat ggtgctgcat aatttcccca 540
tttccgaggt ggcgtaatag cgaagaggcg cgcactgatc gtgtttctcc tcacgtgatc 600
agcttgtagg gggaatgtga ccagatgcgg tattttctcg tttcacatgt gtgcggcgtt 660
ttcaacgaca catggtgcac tatcagaaca ctctgtactg atgtcttgaa ggataaatgt 720
caccgacaca cgggaatcct cgatgtcacg cggtgttttg cgtgtgagcg cgcgcggccc 780
ccatatagtg catattgtga ccgacacgtg gagatgtgtg tgcgatagtg atacaacgac 840
ctctcacgaa aagctcgaga gtatagggcg acgtgagagt atctatattt ttaggtttct 900
<210> 10
<211> 943
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 10
attacgaatt cgagctcggt acccggggat cctctagaga ttgatgagtc ctgagtaaca 60
cccacgagtc aggatatggc acatggccgg tttatatgtt gggaaattca ggcaaaaata 120
atccgtatcc ccgcatacac ggagtcggac ttgtctacca ccccagtcga gactctaccc 180
ttcggcacat cctcgactgg attcctccct gcccgaatgc aaggctgtcg caagctatgc 240
agcgaactgc ctgacttgac aacagcctaa gatctacgaa tcaaacaagt agttactaaa 300
gccacgactt gtaatgctaa cgatcggaaa ttttatagtt ggggtggctg tcgtctgtta 360
taatgtgtgt ttgttgattt tgggcgtata tattcataat ctgtttcttt tgttacgtag 420
atggcgtcta ttccgtttga ctgtattccc ttccttccaa aagcagtagg aatacataaa 480
atacgtacga acacacacgc acacacacac gcacacacac acacacatac tcagttttat 540
ggctatagat actttgaaaa aaaacatagg tcatgatctt ccactgacta taagtaatat 600
tcaggtttga gaaaaatcca tcgcaaacgg taggaatgca taaaatatat actaacacac 660
acacacgcac acacacatac acacacacac acatactcag tttactcagg actcatcaat 720
cgtcgacctg caggcatgca agcttggcac tggccgtcgt tttacaacgt cgtgactggg 780
aaaaccctgg cgttacccaa cttaatcgcc ttgcagcaca tccccctttc gccagctggc 840
gtaatagcga agaggcccgc accgatcgcc cttcccaaca gttgcgcagc ctgaatggcg 900
aatggcgcct gatgcggtat tttctcctta cgcatctgtg cgg 943
<210> 11
<211> 946
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 11
acgaattcga gctcggtacc cggggatcct ctagagattg atgagtcctg agtaacaaaa 60
tgtggaaaca gtattacaat gagtataatg ttcttcaagt ctggtactta gatacatgtg 120
tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtaaccc gatatgtcta tcagtctagt 180
gcggcattct ctcgttctgg tcagctccgc gtccgtggct gtctttgttg taccgactat 240
cctttactca ggactcatca atcgtcgacc tgcaggcatg caagcttggc actggccgtc 300
gttttacaac gtcgtgactg ggaaaaccct ggcgttaccc aacttaatcg ccttgcagca 360
catccccctt tcgccagctg gcgtaatagc gaagaggccc gcaccgatcg cccttcccaa 420
cagttgcgca gcctgaatgg cgaatggcgc ctgatgcggt attttctcct tacgcatctg 480
tgcggtattt cacaccgcat atggtgcact ctcagtacaa tctgctctga tgccgcatag 540
ttaagccagc cccgacaccc gccaacaccc gctgacgcgc cctgacgggc ttgtctgctc 600
ccggcatccg cttacagaca agctgtgacc gtctccggga gctgcatgtg tcagaggttt 660
tcaccgtcat caccgaaacg cgcgagacga aagggcctcg tgatacgcct atttttatag 720
gttaatgtca tgataataat ggtttcttag acgtcaggtg gcacttttcg gggaaatgtg 780
cgcggaaccc ctatttgttt atttttctaa atacattcaa atatgtatcc gctcatgaga 840
caataaccct gataaatgct tcaataatat tgaaaaagga agagtatgag tattcaacat 900
ttccgtgtcg cccttattcc cttttttgcg gcattttgcc ttcctg 946
<210> 12
<211> 960
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 12
tacgaattcg agctcggtac ccggggatcc tctagagatt gatgagtcct gagtaatatc 60
agaaagaggc aactgaagtc tctgggacat attatgagaa aggagggtct ggaaaacctt 120
atactcacag gacggataga gggaggtaga gacaggggaa aacaccgcac gacatacttg 180
aagggcctga gcgaatggat gacgggaagg ggcatgggag atacggggag tcaagccctg 240
ttgagagctt cgatagatag ggggaagtgg aaagccatga tagcctacgt cctgaaggga 300
tacggcacat agaagaagaa tgtttcgatg atgaaggtct ctttaggcgg aattggcaaa 360
cattatccca acactttatt tatacgcttg acaaaaggaa ataaaaataa aacaaaaaac 420
aaatcaaaat aaagacgaaa acaataacaa caacaacaac cactaacatg gcactaaagg 480
cgggggtcta gaatttatgg tgtggttact caggactcat caatcgtcga cctgcaggca 540
tgcaagcttg gcactggccg tcgttttaca acgtcgtgac tgggaaaacc ctggcgttac 600
ccaacttaat cgccttgcag cacatccccc tttcgccagc tggcgtaata gcgaagaggc 660
ccgcaccgat cgcccttccc aacagttgcg cagcctgaat ggcgaatggc gcctgatgcg 720
gtattttctc cttacgcatc tgtgcggtat ttcacaccgc atatggtgca ctctcagtac 780
aatctgctct gatgccgcat agttaagcca gccccgacac ccgccaacac ccgctgacgc 840
gccctgacgg gcttgtctgc tcccggcatc cgcttacaga caagctgtga ccgtctccgg 900
gagctgcatg tgtcagaggt tttcaccgtc atcaccgaaa cgcgcgagac gaaagggtcc 960
<210> 13
<211> 960
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 13
tacgaattcg agctcggtac ccggggatcc tctagagatt gatgagtcct gagtaatatc 60
agaaagaggc aactgaagtc tctgggacat attatgagaa aggagggtct ggaaaacctt 120
atactcacag gacggataga gggaggtaga gacaggggaa aacaccgcac gacatacttg 180
aagggcctga gcgaatggat gacgggaagg ggcatgggag atacggggag tcaagccctg 240
ttgagagctt cgatagatag ggggaagtgg aaagccatga tagcctacgt cctgaaggga 300
tacggcacat agaagaagaa tgtttcgatg atgaaggtct ctttaggcgg aattggcaaa 360
cattatccca acactttatt tatacgcttg acaaaaggaa ataaaaataa aacaaaaaac 420
aaatcaaaat aaagacgaaa acaataacaa caacaacaac cactaacatg gcactaaagg 480
cgggggtcta gaatttatgg tgtggttact caggactcat caatcgtcga cctgcaggca 540
tgcaagcttg gcactggccg tcgttttaca acgtcgtgac tgggaaaacc ctggcgttac 600
ccaacttaat cgccttgcag cacatccccc tttcgccagc tggcgtaata gcgaagaggc 660
ccgcaccgat cgcccttccc aacagttgcg cagcctgaat ggcgaatggc gcctgatgcg 720
gtattttctc cttacgcatc tgtgcggtat ttcacaccgc atatggtgca ctctcagtac 780
aatctgctct gatgccgcat agttaagcca gccccgacac ccgccaacac ccgctgacgc 840
gccctgacgg gcttgtctgc tcccggcatc cgcttacaga caagctgtga ccgtctccgg 900
gagctgcatg tgtcagaggt tttcaccgtc atcaccgaaa cgcgcgagac gaaagggtcc 960
<210> 14
<211> 958
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 14
acgaattcga gctcggtacc cggggatcct ctagagattg atgagtcctg agtaaggttc 60
tattcatagt tgttccgttg aaaacgatct tcatttttca agcgtgctgg gcaaatggtg 120
cgtctgctgt gttcactttt tgcaaaagtg ggatcacagc taacaccaga atatctttct 180
ttccttgcca ttcggttttt tcttttgcca tttttactac aattttttgt gattttccat 240
ttcctcatta ttatctcttc tagagttgtg ccacacacac acacacacac acacacacac 300
acacacacac acacacacac acacacacac acacacacac acacacacag atgagagagt 360
gaggttttct cattactcag gactcatcac acacacacac acacacacac acacacacac 420
acacacacac acacacacat acacacatac aagaaagaga catattcaca attactcagg 480
actcatcaat cgtcgacctg caggcatgca agcttggcac tggccgtcgt tttacaacgt 540
cgtgactggg aaaaccctgg cgttacccaa cttaatcgcc ttgcagcaca tccccctttc 600
gccagctggc gtaatagcga agaggcccgc accgatcgcc cttcccaaca gttgcgcagc 660
ctgaatggcg aatggcgcct gatgcggtat tttctcctta cgcatctgtg cggtatttca 720
caccgcatat ggtgcactct cagtacaatc tgctctgatg ccgcatagtt aagccagccc 780
cgacacccgc caacacccgc tgacgcgccc tgacgggctt gtctgctccc ggcatccgct 840
tacagacaag ctgtgaccgt ctccggggag ctgcatgtgt cagaggtttt caccgtcatc 900
accgaaacgc gcgagacgaa agggcctcgt gatacgccta tttttatagg ttaatgtc 958
<210> 15
<211> 955
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 15
cgaattcgag ctcggtaccc ggggatcctc tagagattga tgagtcctga gtaagttaac 60
gaagtgaaaa caagtgttgc gagccgatgt atgcattttc cccaacttgt tgcaggcgtt 120
agaaacgtcg aagtttgagt tgaaaaataa cacgctgtct cctgtaatgc ccacagaaca 180
catggatgtc ttgctcgtgt gtccgccatg atgaaataca aagaaataac aagcaccaat 240
aaaaacctac aaacaaataa atatgtattg acaataaaga tatacgagat ataagtaaca 300
aatgaatgtg aaaatcattt agggtttcaa agtatgtgga ctgtggagtg agtgaatgtg 360
tgtacgtacg tacgggtatg tatgtgtgtg tgagtgtgtg tttactcagg actcatcaat 420
cgtcgacctg caggcatgca agcttggcac tggccgtcgt tttacaacgt cgtgactggg 480
aaaaccctgg cgttacccaa cttaatcgcc ttgcagcaca tccccctttc gccagctggc 540
gtaatagcga agaggcccgc accgatcgcc cttcccaaca gttgcgcagc ctgaatggcg 600
aatggcgcct gatgcggtat tttctcctta cgcatctgtg cggtatttca caccgcatat 660
ggtgcactct cagtacaatc tgctctgatg ccgcatagtt aagccagccc cgacacccgc 720
caacacccgc tgacgcgccc tgacgggctt gtctgctccc ggcatccgct tacagacaag 780
ctgtgaccgt ctccgggagc tgcatgtgtc agaggttttc accgtcatca ccgaaacgcg 840
cgagacgaaa gggcctcgtg atacgcctat ttttataggt taatgtcatg ataataatgg 900
tttcttagac gtcaggtggc acttttcggg gaaatgtgcg cggaacccct atttg 955
<210> 16
<211> 958
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 16
cgaattcgag ctcggtaccc ggggatcctc tagagattga tgagtcctga gtaaatgcag 60
aatccaacaa tagttagctc ctcattattt agaaaatgtc cttttggggt gctaacggcc 120
cctataaata agtggtcact catgacccaa cttcttttta cctgtctttc tacacaacat 180
ccaagatgta agatcaggct cacagaaagc atgcttgcat gcaccacatg ctcacaaaga 240
cacctttatc ctctctcaag acacacaccc aaaacatgaa cttgtgcaaa agaaacgtgc 300
gctcgtgtgc actcactagc actcattcat gcatgcacac acacacacac acacacacac 360
acttagcatc catttcagat ccacggtaat attttagggg tcctaatagc taattcttta 420
taactgagaa ttgcaattcc tacagtaatg tacgccatat tactcaggac tcatcaatcg 480
tcgacctgca ggcatgcaag cttggcactg gccgtcgttt tacaacgtcg tgactgggaa 540
aaccctggcg ttacccaact taatcgcctt gcagcacatc cccctttcgc cagctggcgt 600
aatagcgaag aggcccgcac cgatcgccct tcccaacagt tgcgcagcct gaatggcgaa 660
tggcgcctga tgcggtattt tctccttacg catctgtgcg gtatttcaca ccgcatatgg 720
tgcactctca gtacaatctg ctctgatgcc gcatagttaa gccagccccg acacccgcca 780
acacccgctg acgcgccctg acgggcttgt ctgctcccgg catccgctta cagacaagct 840
gtgaccgtct ccgggagctg catgtgtcag aggttttcac cgtcatcacc gaaacgcgcg 900
agacgaaagg gcctcgtgat acgcctattt ttataggtta atgtcatgat aataatgg 958
<210> 17
<211> 954
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 17
tacgaattcg agctcggtac ccggggatcc tctagagatt atgacttgga taaaaaatat 60
caaagtattg taaataataa tggtaaaact aaaatgaata acgataattg ttattggagt 120
ccgattagaa aaagttcact tggtcggaac ggatgaattg atatagatga aagcagaaaa 180
acaggagagg aaatgatgag attaggaggt gtaaaaataa aagatgataa gtccgaaagc 240
aactaagcga attttatgca taataaaaca gaaagggagc attactcagg actcatcaat 300
cgtcgacctg caggcatgca agcttggcac tggccgtcgt tttacaacgt cgtgactggg 360
aaaaccctgg cgttacccaa cttaatcgcc ttgcagcaca tccccctttc gccagctggc 420
gtaatagcga agaggcccgc accgatcgcc cttcccaaca gttgcgcagc ctgaatggcg 480
aatggcgcct gatgcggtat tttctcctta cgcatctgtg cggtatttca caccgcatat 540
ggtgcactct cagtacaatc tgctctgatg ccgcatagtt aagccagccc cgacacccgc 600
caacacccgc tgacgcgccc tgacgggctt gtctgctccc ggcatccgct tacagacaag 660
ctgtgaccgt ctccgggagc tgcatgtgtc agaggttttc accgtcatca ccgaaacgcg 720
cgagacgaaa gggcctcgtg atacgcctat ttttataggt taatgtcatg ataataatgg 780
tttcttagac gtcaggtggc acttttcggg gaaatgtgcg cggaacccct atttgtttat 840
ttttctaaat acattcaaat atgtatccgc tcatgagaca ataaccctga taaatgcttc 900
aataatattg aaaaaggaag agtatgagta ttcaacattt ccgtgtcgcc ctat 954
<210> 18
<211> 939
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 18
attacgaatt cgagctcggt acccggggat cctctagaga ttgatgagtc ctgagtaaaa 60
gccccccaca cacacacaca cacgcacaca ctgcgaaact ccataacgtt ttcatttcgt 120
acacattcac acaattacaa tttatttttc tttcactcgc ttgactctct ctctctctct 180
ttctttccct ctttctctct ctctctctct atttctctct ctctcacaca cacacatgta 240
cacaggcatg cattctctct ctctttttct ctctttctct ctttcacact ttctcactca 300
ctcactcact cactcactca ctcactcact cactcaccct ctttctcttc ctcagcatat 360
tgctgctgcc accaattcta cagaacgagt tagtagcatt agtagtcttg ctgcttgttg 420
ttagtgttga gattggagtc cgtaatccac aaaacggctc cagttcgcaa attccttttt 480
tcttcccttc cgttagaagt tacttttatt agcatatttt agaaactttt ataataaccc 540
atcgcttact caggactcat caatcgtcga cctgcaggca tgcaagcttg gcactggccg 600
tcgttttaca acgtcgtgac tgggaaaacc ctggcgttac ccaacttaat cgccttgcag 660
cacatccccc tttcgccagc tggcgtaata gcgaagaggc ccgcaccgat cgcccttccc 720
aacagttgcg cagcctgaat ggcgaatggc gcctgatgcg gtattttctc cttacgcatc 780
tgtgcggtat ttcacaccgc atatggtgca ctctcagtac aatctgctct gatgccgcat 840
agttaagcca gccccgacac ccgccaacac ccgctgacgc gccctgacgg gcttgtctgc 900
tcccggcatc cgcttacaga caagctgtga ccgtctccc 939
<210> 19
<211> 908
<212> DNA
<213>Sepiella maindroni (Sepiella maindroni de Rochebrune)
<400> 19
atgattacga attcgagctc ggtacccggg gatcctctag agattgatga gtcctgagta 60
acgtggggaa tccaagctca tacactcgga ctgaggacaa aaattcctcg agccctcgca 120
accgtcggtt tcactgtcct ctgggcgaag tcagagacgc aaataataaa accttacccg 180
gctgatgaca ggttattata catacataca tatatgtgtg tgtgtgtgta tgtgtgtgtg 240
tgtgtatgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 300
tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg taaacgtatg caatcgctta ttatgaaagc 360
gaatattggc tgcgtctatt cgagtaatca catttgtcta ttcaccatga cgccgttcta 420
atcgtgggga gtgaacttgc attacgtaaa ttgtttatta ctttccctca gatatgcttt 480
ctgtcgtgca aatataaggc atcactcgtc tgcagatttt actcaggact catcaatcgt 540
cgacctgcag gcatgcaagc ttggcactgg ccgtcgtttt acaacgtcgt gactgggaaa 600
accctggcgt tacccaactt aatcgccttg cagcacatcc ccctttcgcc agctggcgta 660
atagcgaaga ggcccgcacc gatcgccctt cccaacagtt gcgcagcctg aatggcgaat 720
ggcgcctgat gcggtatttt ctccttacgc atctgtgcgg tatttcacac cgcatatggt 780
gcactctcag tacaatctgc tctgatgccg catagttaag ccagccccga cacccgccaa 840
cacccgctga cgcgccctga cgggcttgtc tgctcccggc atccgcttac agacaagctg 900
tgaccgtc 908
<210> 20
<211> 23
<212> DNA
<213>Artificial synthesized (Saccharum)
<400> 20
gatcgtcgac ggtaccgaat tct 23
<210> 21
<211> 23
<212> DNA
<213>Artificial synthesized (Saccharum)
<400> 21
gtcaagaatt cggtaccgtc gac 23
Claims (7)
1. the microsatellite marker for Sepiella maindroni Parentage determination, it is characterised in that:The nucleotides of the microsatellite marker
Sequence is SEQ ID No:1-19.
2. the microsatellite marker according to claim 1 for Sepiella maindroni Parentage determination, it is characterised in that:It is described
The screening technique of microsatellite marker comprises the following steps:
1) extraction of genomic DNA:Sepiella maindroni genomic DNA is extracted, with restriction enzyme Mbol by genomic DNA digestion,
Reclaim 400-1000bp DNA fragmentations;
2) preparation of connection product:By joint A (5'-GATCGTCGACGGTACCGAATTCT-3') and joint B (5'-
GTCAAGAATTCGGTACCGTCGAC-3') equal proportion mixes, and is then connected with digestion recovery DNA fragmentation, obtains connection product;
3) amplification of connection product:Using connection product as template, enter performing PCR amplification by primer of joint B;
4) strepavidin magnetic beads are caught:Take the amplified production and biotinylated probes (CA) 12 of connection product(20mmol/L)Hybridization, adds
Enter to be coated with the magnetic bead mixing of streptomysin, remove hybrid mixed liquid;
5) elution of DNA fragmentation:Magnetic bead is added to TE buffer solutions, 5min is incubated at 95 DEG C, separates magnetic bead, obtain defending containing micro-
The supernatant of star DNA fragmentation;
6) amplification of fragment is eluted:Using joint B as primer, using the supernatant containing microsatellite DNA fragment as template, enter performing PCR
Amplification, purify pcr amplification product, then be connected with pMD18-T carriers, conversion DH5 α competent cells, be coated on containing IPTG,
X-Gal and ampicillin LB flat boards, 37 DEG C of overnight incubations, enter performing PCR amplification by template of bacterium solution, detect, sequencing;
7) acquisition of microsatellite marker:Primer is designed according to the flanking sequence at sequencing gained microsatellite both ends, to the 5' ends of primer
Modified with FAM, Bing carries out pcr amplification reaction by template of Sepiella maindroni genomic DNA, by each PCR primer in 6% denaturation
Each primer polymorphism is detected on polyacrylamide gel, filter out the amplification of non-specific band less, result is stable, rich polymorphism
Microsatellite marker 20, its nucleotide sequence is as shown in SEQ ID No.1 to SEQ ID No.20.
3. the microsatellite marker according to claim 2 for Sepiella maindroni Parentage determination, it is characterised in that:It is described
Digestion temperature is 37 DEG C in step 1), and the digestion time is 3h.
4. the microsatellite marker according to claim 2 for Sepiella maindroni Parentage determination, it is characterised in that:It is described
Mixing temperature is 95 DEG C in step 2), incorporation time 10min.
5. the microsatellite marker according to claim 2 for Sepiella maindroni Parentage determination, it is characterised in that:It is described
Hybridization conditions are in step 4):5min first is denatured at 95 DEG C, then hybridizes 60min at 65 DEG C.
6. the microsatellite marker according to claim 2 for Sepiella maindroni Parentage determination, it is characterised in that:It is described
Design of primers condition is in step 7):G/C content is 40%-60%, and annealing temperature is 48-60 DEG C, primer length 18bp-24bp.
7. nucleotides sequence is classified as SEQ ID No:Application of the 1-19 microsatellite marker in Sepiella maindroni Parentage determination,
It is characterized in that nucleotides sequence is classified as SEQ ID No:1-19 microsatellite marker is used to identify in Sepiella maindroni family
Purposes.
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