CN107354221A - The PCR detection kit of Ye Shi lung pityrosporion ovales - Google Patents

The PCR detection kit of Ye Shi lung pityrosporion ovales Download PDF

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CN107354221A
CN107354221A CN201710750749.1A CN201710750749A CN107354221A CN 107354221 A CN107354221 A CN 107354221A CN 201710750749 A CN201710750749 A CN 201710750749A CN 107354221 A CN107354221 A CN 107354221A
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秦伟
夏成青
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Hefei Mai Mai Medical Laboratory Co Ltd
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Hefei Mai Mai Medical Laboratory Co Ltd
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    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
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Abstract

The present invention proposes a kind of PCR detection kit of Ye Shi lungs pityrosporion ovale, including nucleic acid extraction liquid, PCR reaction solutions, enzyme mixation, positive control and negative control, the PCR reaction solutions include the pair for amplification primer and a specific amplification probe designed for the target sequence of Ye Shi lung pityrosporion ovales, pair for amplification primer is made up of positive amplimer and direction amplimer, the positive amplimer has the nucleotide sequence shown in SEQ ID NO.1, the reversely amplimer has the nucleotide sequence shown in SEQ ID NO.2, the specific amplification probe is made up of annulus sequence and two short handle sequences, 5 ' ends of specific amplification probe are marked with fluorescent reporter group, the end of specific amplification probe 3 ' is marked with fluorescent quenching group;The sequence of the SEQ ID NO.1 is 5 ' GGAGTCGAGAGGGAAACAGC 3 ';The sequence of the SEQ ID NO.2 is 5 ' GCTCCCTTCCTGAGATCATTACAC 3 '.The kit susceptibility is high, detection is quick and stability is good, prevents from polluting.

Description

The PCR detection kit of Ye Shi lung pityrosporion ovales
Technical field
The invention belongs to lung pityrosporion ovale detection technique field, and in particular to a kind of PCR detection kit of Ye Shi lungs pityrosporion ovale.
Background technology
Lung pityrosporion ovale is to parasitize a kind of opportunistic pathomycete that is extracellular, having host specificity, can be caused serious Pneumocystis pneumonia (pneumocystispneumonia, PCP), AIDS patient's fatal rate to immunologic hypofunction is 10%~20%.However, some non-AIDS such as rheumatic arthritis, blood pain, tumour etc. is complicated by infection the increasing of PCP quantity in recent years More, fatal rate is high by 50%.Moreover, chronic obstructive pulmonary disease (chronic obstructive pulmonary disease, COPD) relevant with PCP, especially settling down (colonization) with bacterium colony has substantial connection.
Pneumocystis pneumonia pathogen has been considered as protozoon always since 1909, but confirmed in 1988 be it is a kind of between Eucaryote between ascus (true) bacterium subphylum and load (true) bacterium subphylum, it is a member of fungi family.Frenkel will within 1999 Parasitizing human body causes mankind PCP lung pityrosporion ovale to be named as Ye Shi lungs pityrosporion ovale (Pneumoeystisjiroveci, PJ).Face Bed diagnosis PCP cases rely on clinical manifestation, make a definite diagnosis the trophozoite and/or packing for needing to find PJ.However, because PJ can not be external Culture, typically takes colouring method to be diagnosed, but this method positive rate is low, cumbersome time-consuming, constrains PCP aetology Diagnosis, easily causes mistaken diagnosis and fails to pinpoint a disease in diagnosis.
In recent years, external multinomial research is thought, polymerase chain reaction (PCR) method can significantly improve the quick of PCP diagnosis Perception and specificity, and just can discover whether to infect such fungi in disease early stage, one of goldstandard of diagnosis can be turned into.So And because the bacterium is between fungi and protozoon, form needs to extract the core of the bacterium similar to protozoon using PCR Sour DNA, to destroy such fungi technically has certain, and the domestic PCR detection method about the bacterium is seldom reported.Patent Application No. 201110086848.7 describes adds gel electrophoresis to detect lung pityrosporion ovale with PCR, but this method operation is numerous Trivial, open operation is also easy to pollute, and is not suitable for clinically applying.
The content of the invention
The present invention proposes a kind of PCR detection kit of Ye Shi lungs pityrosporion ovale, the kit susceptibility is high, detection is quick and Stability is good, and PCR amplifications start all to be afterwards hands-off operation, can effectively prevent from polluting, the addition of UNG enzymes, can more prevent two The pollution of secondary amplification.
The technical proposal of the invention is realized in this way:
A kind of PCR detection kit of Ye Shi lungs pityrosporion ovale, including nucleic acid extraction liquid, PCR reaction solutions, enzyme mixation, sun Property control and negative control, the positive control be the specific sequence of artificial synthesized Ye Shi lung pityrosporion ovales, the feminine gender is right According to for aqua sterilisa, archaeal dna polymerase containing Taq and UNG enzymes in the enzyme mixation;The PCR reaction solutions include being directed to Ye Shi lung spores The pair for amplification primer and a specific amplification probe of the target sequence design of daughter bacteria, pair for amplification primer is by positive amplimer Formed with direction amplimer, the positive amplimer has the nucleotide sequence shown in SEQ ID NO.1, described reversely to expand Increasing primer has the nucleotide sequence shown in SEQ ID NO.2, and the specific amplification probe is by annulus sequence and two short handles Sequence forms, and two short handle sequences are located at the both ends of the annulus sequence respectively, and the annulus sequence has SEQ ID NO.4 institutes The nucleotide sequence shown, short handle sequence are rearranged by 4~8 GC bases mixing, and 5 ' ends of specific amplification probe are marked with Fluorescent reporter group, the end of specific amplification probe 3 ' are marked with fluorescent quenching group;
The sequence of the SEQ ID NO.1 is 5 '-GGAGTCGAGAGGGAAACAGC-3 ';
The sequence of the SEQ ID NO.2 is 5 '-GCTCCCTTCCTGAGATCATTACAC-3 ';
The sequence of the SEQ ID NO.4 is 5 '-GATGGCTGTTTCCAAGCCCACTTC-3 '.
Preferably, the short handle that the specific amplification probe 5 ' is held has the nucleotide sequence described in SEQ ID NO.5, institute The short handle for stating the end of specific amplification probe 3 ' has nucleotide sequence described in SEQ ID NO.6;The sequence of the SEQ ID NO.5 It is classified as 5 '-GGCGGC-3 ';The sequence of the SEQ ID NO.6 is 5 '-GCCGCC-3 '.
Preferably, the specific amplification probe has the nucleotide sequence shown in SEQ ID NO.3, the SEQ ID NO.3 sequence is 5 '-GGCGGCGATGGCTGTTTCCAAGCCCACTTCGCCGCC-3 ';The 5 ' of the specific amplification probe It is FAM that end, which is marked with fluorescent reporter group, and it is DABCYL that 3 ' ends, which are marked with fluorescent quenching group,.
Preferably, the nucleic acid extraction liquid is made up of cleaning fluid and lysate, and the lysate is by component A and B component group Into the component A is mainly enzyme and solution made of surfactant, and the B component is Sha's graceful and lauryl sodium sulfate of ancient India Ethanol solution, one or more of the enzyme in lysozyme, cellulase and glusulase, the surfactant is Buddhist Sha is graceful.The nucleic acid extraction of the more common nucleic acid extraction liquid of the nucleic acid extraction liquid is more efficient, than used in 201110086848.7 Nucleic acid extraction liquid it is more preferable.
Preferably, the concentration of lysozyme is 1~15mg/mL in the component A, 1~15mg/mL of cellulase, glusulase 1 ~15mg/mL, Sha's graceful concentration of ancient India is 0.001wt%~0.02wt%;In the B component Sha's graceful concentration of ancient India for 0.002wt%~ 0.5wt%, lauryl sodium sulfate 0.002wt%~0.5wt%.
Preferably, there is the specific spy of internal standard of the interior label primer and humanized of a pair of humanizeds in the PCR reaction solutions Pin, the interior label primer of a pair of humanizeds are made up of positive interior label primer and reverse interior label primer, and positive interior label primer has SEQ Nucleotide sequence described in ID NO.7, reverse interior label primer have the nucleotide sequence described in SEQ ID NO.8, humanized's Internal standard specific probe has the nucleotide sequence described in SEQ ID NO.9,5 ' end marks of the internal standard specific probe of humanized Note has fluorescent reporter group, and the end of internal standard specific probe 3 ' of humanized is marked with fluorescent quenching group;
The sequence of the SEQ ID NO.7 is 5 '-CTGAGGAGAAGTCTGCCGTTAC-3 ';
The sequence of the SEQ ID NO.8 is 5 '-CACATGCCCAGTTTCTATT GG-3 ';
The sequence of the SEQ ID NO.9 is 5 '-GCAAGGTGAACGTGGATGAAG-3 '.
Preferably, the internal standard specific probe of humanized 5 ' end be marked with fluorescent reporter group be selected from HEX, JOE, ROX, TET, Texas Red, CY3 or CY5, the end of internal standard specific probe 3 ' of humanized are marked with fluorescent quenching group and are selected from Tamra, BHQ1 or BHQ2.
Preferably, the target sequence of the Ye Shi lungs pityrosporion ovale is selected from Ye Shi lung pityrosporion ovale mitochondria large subunit rRNA genes Conserved sequence, the conserved sequence of ITS genes, the conserved sequence of HSP70 genes, DHPS bases on Ye Shi lung pityrosporion ovale Matrix attachment regions The conserved sequence of cause or the conserved sequence of DHFR genes.
Beneficial effects of the present invention:
1st, the patent of invention of the present invention contrast patent No. 201110086848.7, the method for detection is different, reagent of the present invention The susceptibility of box is high, and detection is quick, and stability is good.
2nd, the present invention is easy to operate, and PCR amplifications start all to be afterwards hands-off operation, can effectively prevent from polluting, UNG enzymes Add, can more prevent the pollution of secondary amplification.
3rd, kit of the present invention introduces the control of complete series monitoring, is extracted from sample, and augmentation detection to the end is each Step can policer operation and experimental result quality, so as to ensure the accuracy of clinical effectiveness and reliability.
4th, optimization design has been done in terms of nucleic acid extraction of the present invention, nucleic acid extraction is more efficient.
Brief description of the drawings
In order to illustrate more clearly about the embodiment of the present invention or technical scheme of the prior art, below will be to embodiment or existing There is the required accompanying drawing used in technology description to be briefly described, it should be apparent that, drawings in the following description are only this Some embodiments of invention, for those of ordinary skill in the art, on the premise of not paying creative work, can be with Other accompanying drawings are obtained according to these accompanying drawings.
Fig. 1 is the sample negative findings schematic diagram of kit of the present invention detection;
Fig. 2 is a kind of positive findings schematic diagram of sample of kit of the present invention detection;
Fig. 3 is another this positive findings schematic diagram of sample of kit of the present invention detection.
Embodiment
Below in conjunction with the accompanying drawing in the embodiment of the present invention, the technical scheme in the embodiment of the present invention is carried out clear, complete Site preparation describes, it is clear that described embodiment is only part of the embodiment of the present invention, rather than whole embodiments.It is based on Embodiment in the present invention, those of ordinary skill in the art are obtained every other under the premise of creative work is not made Embodiment, belong to the scope of protection of the invention.
The target spot of embodiment 1 selects
By taking Ye Shi lung pityrosporion ovale mitochondrial genomes sequences JX499145.1 as an example, choose big sub- in the mitochondrial genomes Base rRNA (mtLSUrRNA) sequence be template be used as reference sequences, preferably the sequence be because of mitochondria copy number with respect to the bacterium Will more several times for genome copy numbers, therefore, with regard to more, the bacterium for the DNA of unit extraction template amount Relative gene group Extracting genome DNA is inherently highly difficult, so, the gene on mitochondria is chosen as reference gene, can undoubtedly be greatly improved The amplification efficiency of follow-up template.Large subunit rRNA (mtLSUrRNA) sequence is as follows in mitochondrial genomes:
AAAGAAGTTAATAAGGATAACTAGCTAGTATATTTTAGGAGGTTTTATACCTAATTCATGATTATACAT ATGTTATCATGTAACTCCGAGAAGGAAACTTTATTAAGATTACGAAGTGAACTGAAACATCTTAGTAACTTTAGGAA TAGAAATCAACCGAGATTTTGTGAGTAGTGGTGAGCGAAAGCAAAGTAGCCTATGCATTTATTGATAGTAATATTGT CATTATTAATCTGACTCTATGAGTTGGAATCTTATAACTGAGATTTAATTTCATGATAAAAAGTTGGAAACCTTTCA ATAGAATAGATAGAATAGTAATGTTCTTGATATGTGGAAGCGAAAGATGGTGAAAGCCCATGATCCATGAAGATAAA TGTTATTTAAGTAGAACGAGGTTAATCTTGTTTGAATACAGGGGATCTATCCTCTAAGGCTAAATATAGTATACTAA GCGATAGTGAAGAGTACCGTGAGGGAAAGTTGAAAAGAATATAATAAGGAGTATTATCTTTATTAAGTAAGTGAAAT AGATCTTGAATTATTAACTTTATGAGCAGCCGGAGGACTTAGGTCTGACGGTGTACCTTTTGCATAATGGGTCAGCG AGTTAATATTAAATGTAAGTAGTGATACCTAAAGAAATTGATTCTGATAAGGAGTATAATATTTAATATTAGACCCG AAACCTAGTGATCTTACTATGATCAGATGAAAGATTGAACTGGTGTACGTTGCAAAGTACTCAGATGAATTGTGGTA AGGAGTGAAATACAAATCGGACTAGGATATAGCTGGTTTTCTGCGAAATCTATTTTGGTAGATGACTTGTTATTATT TGTAGTGGGTATAGCACTGAATATCTAACTTATGTTAGAAGGGAGTATGAAGGTACTTACTTTGGATATTTAATCTC AGAATAGCTATTAATATATGATGAGTTATCAGACTTCTTGCGATAAGGTGAGGAGTCGAGAGGGAAACAGCCCAGAA TAATATATAAAGTTCCAAAATTGTTATTGAGTGAATTAAAAGAAGTTTTCTTTCGTAGACAGTCAAGAAGTGGGCTT GGAAACAGCCATCTTATAATAAACACGTAATAGTGTAATGATCTCAGGAAGGGAGCGCTTAAAATATACGGATCTAA ATAACATACTGAAATATTATTATATTATTATTAATCAGTGTATGCTGGATACTTGTAAGTGACTACGGGGTTTTTGT ATATAGGTTTAGTTGTAAAGAGTATTAATAATGATATGGGTAGCAGAACATTTAGTAAATAGATGAAGAACAGTATT TTATTGTTTGGATATAACTAAAGAGAGAATGCTGACATGAGTAACGTTAAAGTGGGTGAGAATCCTGCTCGCCGGAA ACAGAAGGGTTTTATGGTAAAGCTTAACTACCATAAGTGAGTGCGGTCTCTAACAGTATCTCGAAGGAGTAATGGAT GAGTAGAATATAAGTAAAAATTATGGTTGTGATGGGTTATTATTCATTATAATTGTAATTCGGGAAAAGGTATATTT ATAAACCGTACTAAAACCGACACAGGTCTGTGGATATTAATGTATTAAGGCGTATGAGAGAATTATTGCGAAGGAAC TCGGCAAAATAATCTCGTAATTTAGAGACAAGAGGTGCCTATTAGTGGGAATTCCTATATGTATATATATGTTATGT ATATGTAGGAACCTTCTTAAGGTGTCACTAAAAAATGTTGTACAACTGTTTACTTAAAACACAGTACTTTGCAAAGA TGAGAATCTTAGTATAAAGTATGAGATCTGCCCAATGCTAGGGAACGAACAGTTTGATTTTGAGTGAATCTTGAAAT CGATTGAAGTTCTAGTGAATGGCGGCCTTAACTATAAGGGTCCTAAGGTAGCGAAATTCCTTGGCCGTTAAATGCGG TCCCGCATGAATGGTTTAATGATACAACAACTGTCTCCGCAATAAACTTAGTGAAATTGGAATAGCCGTGCAGATAC GGTTTATGTGTAGAAAGACGGGAAGACCCTGTGCAGCTTTACTGTAGTTAGTTATTGTTATTAACTCTCACGTTGGT AGTATATAAGGTAGTTGATTAGACATAAATGAAATACCTTTATCGTGGGCTGCGATGACTTACTGATATATCAGGAC ATTGATTAACAGACAGTTTATGTGGGGCGCATGTCTCAAAAAGAGTATCTGGGATGTCCTAAGGTGAAGTAAAATTG GATGGTAACCAATCAAGTTTGAAATATTAGTTATGGTGTCTAATTGTTAGGATTCTAAATTAGAATGGGTGTCAGTA TTGTGAGATATTGAGATCAATAGATATTTGTAATACTAATGTTAATGAATTCTTGGAAGAAGCATAATGGTATAACT TTGCTTAACAGTGAGATTGACAGATCGATCTGACACGTAAGTGGGGCATAATGACCCTCGTATTCATAATGGAATGG TACGAGAACAACGAATCAAAGCTACGCCAGGGATAACAGGGTTATTTCGTGCGAGAGATCCTATCGACCACGAAGTT TGCCACCTCGATGTCGACTCAACCTATCCTCCAGAGGTAAAAGATTGGAAGGGTTTGGCTGTTCGCCAATTAAAAGG TTACGTGAGTTGGGTTAAAAACGTTGTGAAACAGTTTGGTTCCTATCTTCTATGTATAAAAAGTTAACGAAGAATTT ATTCCTAGTACGCAAGGATCGGAATATCTTAATCCCTGGTTTAATTGTTGTGAAAGCATGGCAATAAAGCTAAATTA GGTAGGAATAAAATTTGAAAGCATCTAAAAATTGAAATCCCTCTTCAGAAACTTGATATTTTCGTTAAAGATGATGA CGTGGATAGGCTTTAGCTGTAAGAATAGTAATGTTCGAAGGTATAAAGTACTAATAAAAGATGAAACTGAAATAT
Embodiment 2 is directed to shot design specific primer and probe
Nucleotide polymorphisms in 85,248,288 3 sites easily be present in document report, the sequence, thus design primer and During probe, these sites are avoided as far as possible, then select remaining region than more conservative sequence to be designed, during design, as far as possible Ensure selected region G/C content between 40%-60%, amplification length is between 100bp-150bp, and primer Tm is at 50 DEG C -65 Between DEG C, probe Tm is higher than primer 0 DEG C -5 DEG C.With PrimerBLAST inside Primer5 and NCBI, Double Selection is carried out, it is final to obtain Proper to following pair for amplification primer and specific amplification probe, positive amplimer has shown in SEQ ID NO.1 Nucleotide sequence, the reversely amplimer have the nucleotide sequence shown in SEQ ID NO.2, and specific amplification probe has Nucleotide sequence shown in SEQ ID NO.3.
The sequence of the SEQ ID NO.1 is 5 '-GGAGTCGAGAGGGAAACAGC-3 ';
The sequence of the SEQ ID NO.2 is 5 '-GCTCCCTTCCTGAGATCATTACAC-3 ';
The sequence of the SEQ ID NO.3 is
5′-GGCGGCGATGGCTGTTTCCAAGCCCACTTCGCCGCC-3′。
The preparation of the nucleic acid extraction liquid of embodiment 3
Nucleic acid extraction liquid is made up of cleaning fluid and lysate, and cleaning fluid is common phosphate buffer, and lysate is divided into A With two kinds of components of B.Component A mainly contains enzyme mixation, including lysozyme, cellulase, glusulase etc. it is therein a kind of or Several to combine, surfactant Buddhist Sha in addition also containing low concentration is graceful;B component mainly contains chemical cleavage agents, contains Buddhist Sha is graceful, lauryl sodium sulfate, ethanol solution etc..
A kind of preferable formula is as follows:
Component A agent prescription is:Lysozyme 10mg/mL, cellulase 5mg/mL, surfactant Sha graceful concentration of ancient India are 0.002%, prepared with 1 × phosphate buffer or 1 × TE.
B component agent prescription is:Surfactant Sha graceful concentration 0.01% of ancient India, lauryl sodium sulfate 0.01%, is used 20% ethanol solution (V/V) is prepared.
Another preferable formula is as follows:
Component A agent prescription is:Lysozyme 5mg/mL, cellulase 5mg/mL, surfactant Sha graceful concentration of ancient India are 0.002%, prepared with 1 × phosphate buffer or 1 × TE.
B component agent prescription is:Surfactant Sha graceful concentration 0.008% of ancient India, lauryl sodium sulfate 0.006%, is used 20% ethanol solution (V/V) is prepared.
Another preferable formula is as follows:
Component A agent prescription is:Lysozyme 5mg/mL, cellulase 5mg/mL, glusulase 5mg/mL, surfactant Sha Graceful concentration of ancient India is 0.002%, is prepared with 1 × phosphate buffer or 1 × TE.
B component agent prescription is:Surfactant Sha graceful concentration 0.005% of ancient India, lauryl sodium sulfate 0.005%, is used 20% ethanol solution (V/V) is prepared.
The use of 4 kits of embodiment
The component that this kit provides has 10 × phosphate buffer, lysate A, lysate B, PCR reaction solution, enzyme mixing Liquid, negative Quality Control, positive quality control.
(1) Ye Shi lungs pityrosporion ovale nucleic acid extraction
Protozoon one kind was belonged in the past because the classification of Ye Shi lungs pityrosporion ovale is upper, fungi one kind was belonged to now, for this kind of Biotinylated nucleic acid extraction is a very big obstacle, and cell cracks the whether abundant efficiency for being directly connected to nucleic acid extraction.Therefore, The present invention specially develops a kind of lysate of high efficiency extraction nucleic acid for the bacterium.
First collect Patients with Lung washing liquid, collected after centrifugation precipitation (sputum sample with 1 × phosphate buffer dilution after from The heart), add 500 1 × phosphate buffers of μ L cleaning precipitation once, then add lysate A50 μ L, after the precipitation that suspends, 37 DEG C More than 30min is incubated, is then directly added into the μ L of lysate B 50, whirlpool concussion 5min again, then 95 DEG C of heating 5min, then Stay supernatant stand-by after 12000rpm centrifugations 2min.
(2) detection of nucleic acids
It is following (50 μ L systems) per person-portion nucleic acid amplification reaction system, it is shown in Table 1:
The nucleic acid PCR amplification reaction system of table 1
Above-mentioned PCR amplification system enters performing PCR response procedures and is shown in Table 2:
The PCR response procedures of table 2
Note:* position is the fluorescent collecting stage.
As a result judge:(1) negative control should be without Ct values, and positive control has Ct values;(2) internal reference should be positive, but sample If strong positive, negative findings can occur in internal reference.Wherein sample negative findings as shown in figure 1, positive findings such as Fig. 2 and Shown in Fig. 3.
The foregoing is merely illustrative of the preferred embodiments of the present invention, is not intended to limit the invention, all essences in the present invention God any modification, equivalent substitution and improvements made etc., should be included in the scope of the protection with principle.

Claims (8)

1. a kind of PCR detection kit of Ye Shi lungs pityrosporion ovale, it is characterised in that including nucleic acid extraction liquid, PCR reaction solutions, enzyme Mixed liquor, positive control and negative control, the positive control be artificial synthesized Ye Shi lung pityrosporion ovales specific sequence, institute It is aqua sterilisa to state negative control, archaeal dna polymerase containing Taq and UNG enzymes in the enzyme mixation;The PCR reaction solutions include being directed to The pair for amplification primer and a specific amplification probe of the target sequence design of Ye Shi lung pityrosporion ovales, pair for amplification primer is by forward direction Amplimer forms with direction amplimer, and the positive amplimer has the nucleotide sequence shown in SEQ ID NO.1, institute Stating reverse amplimer has a nucleotide sequence shown in SEQ ID NO.2, the specific amplification probe by annulus sequence and Two short handle sequence compositions, two short handle sequences are located at the both ends of the annulus sequence respectively, and the annulus sequence has SEQ Nucleotide sequence shown in ID NO.4, short handle sequence are rearranged by 4~8 GC bases mixing, and the 5 ' of specific amplification probe End is marked with fluorescent reporter group, and the end of specific amplification probe 3 ' is marked with fluorescent quenching group;
The sequence of the SEQ ID NO.1 is 5 '-GGAGTCGAGAGGGAAACAGC-3 ';
The sequence of the SEQ ID NO.2 is 5 '-GCTCCCTTCCTGAGATCATTACAC-3 ';
The sequence of the SEQ ID NO.4 is 5 '-GATGGCTGTTTCCAAGCCCACTTC-3 '.
2. the PCR detection kit of Ye Shi lungs pityrosporion ovale according to claim 1, it is characterised in that the amplifying specific Property the short handle held of probe 5 ' there is nucleotide sequence described in SEQ ID NO.5, the short handle that the specific amplification probe 3 ' is held With the nucleotide sequence described in SEQ ID NO.6;The sequence of the SEQ ID NO.5 is 5 '-GGCGGC-3 ';The SEQ ID NO.6 sequence is 5 '-GCCGCC-3 '.
3. the PCR detection kit of Ye Shi lungs pityrosporion ovale according to claim 2, it is characterised in that the amplifying specific Property probe there is nucleotide sequence shown in SEQ ID NO.3, the sequence of the SEQ ID NO.3 for 5 '- GGCGGCGATGGCTGTTTCCAAGCCCACTTCGCCGCC-3′;5 ' ends of the specific amplification probe are marked with fluorescence report Announcement group is FAM, and it is DABCYL that 3 ' ends, which are marked with fluorescent quenching group,.
4. the PCR detection kit of Ye Shi lungs pityrosporion ovale according to claim 1, it is characterised in that the nucleic acid extraction Liquid is made up of cleaning fluid and lysate, and the lysate is made up of component A and B component, and the component A is mainly that enzyme is lived with surface Property solution made of agent, the B component is that Sha is of ancient India graceful with the ethanol solution of lauryl sodium sulfate, the enzyme be selected from lysozyme, Cellulase and the one or more in glusulase, the surfactant are that Buddhist Sha is graceful.
5. the PCR detection kit of Ye Shi lungs pityrosporion ovale according to claim 4, it is characterised in that molten in the component A The concentration of bacterium enzyme is 1~15mg/mL, 1~15mg/mL of cellulase, 1~15mg/mL of glusulase, and Sha's graceful concentration of ancient India is 0.001wt%~0.02wt%;Sha's graceful concentration of ancient India is 0.002wt%~0.5wt% in the B component, lauryl sodium sulfate 0.002wt%~0.5wt%.
6. the PCR detection kit of Ye Shi lungs pityrosporion ovale according to claim 1 or 2, it is characterised in that the PCR is anti- Answer the interior label primer for also having a pair of humanizeds in liquid and the internal standard specific probe of humanized, the interior label primer of a pair of humanizeds by Positive interior label primer forms with reverse interior label primer, and positive interior label primer has the nucleotide sequence described in SEQ ID NO.7, instead There is the nucleotide sequence described in SEQ ID NO.8 to interior label primer, the internal standard specific probe of humanized has SEQ ID Nucleotide sequence described in NO.9,5 ' ends of the internal standard specific probe of humanized are marked with fluorescent reporter group, humanized's The end of internal standard specific probe 3 ' is marked with fluorescent quenching group;
The sequence of the SEQ ID NO.7 is 5 '-CTGAGGAGAAGTCTGCCGTTAC-3 ';
The sequence of the SEQ ID NO.8 is 5 '-CACATGCCCAGTTTCTATT GG-3 ';
The sequence of the SEQ ID NO.9 is 5 '-GCAAGGTGAACGTGGATGAAG-3 '.
7. the PCR detection kit of Ye Shi lungs pityrosporion ovale according to claim 6, it is characterised in that the internal standard of humanized 5 ' ends of specific probe are marked with fluorescent reporter group and are selected from HEX, JOE, ROX, TET, Texas Red, CY3 or CY5, people The end of internal standard specific probe 3 ' of source property is marked with fluorescent quenching group and is selected from Tamra, BHQ1 or BHQ2.
8. the PCR detection kit of Ye Shi lungs pityrosporion ovale according to claim 1, it is characterised in that the Ye Shi lungs spore The target sequence of daughter bacteria is selected from conserved sequence, Ye Shi lung spore sclerotium bases on Ye Shi lung pityrosporion ovale mitochondria large subunit rRNA genes Because of the conserved sequence of the upper ITS genes of group, the conserved sequence of HSP70 genes, the conserved sequence of DHPS genes or DHFR genes Conserved sequence.
CN201710750749.1A 2017-08-28 2017-08-28 The PCR detection kit of Ye Shi lung pityrosporion ovales Pending CN107354221A (en)

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CN109234374A (en) * 2018-08-13 2019-01-18 武汉千麦医学检验所有限公司 A kind of kit carrying out Genotyping for folic acid metabolism gene
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CN111926007A (en) * 2020-09-22 2020-11-13 首都医科大学附属北京友谊医院 Primer, probe and kit for detecting pneumocystis carinii and toxoplasma and detection method
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CN112280832A (en) * 2020-11-09 2021-01-29 湖南大地同年生物科技有限公司 Extraction-free nucleic acid detection method and kit
CN112458196A (en) * 2020-12-11 2021-03-09 吉林大学 Primer group and kit for quantitative detection of yersinia sporogenes and application of primer group and kit
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Application publication date: 20171117