CN107216372A - A kind of PPR virus HN Protein Epitopes peptide H362 and its determination, preparation method and application - Google Patents
A kind of PPR virus HN Protein Epitopes peptide H362 and its determination, preparation method and application Download PDFInfo
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Abstract
The present invention relates to a kind of PPR virus HN Protein Epitopes peptide H362 and its determination, preparation method and application, the amino acid sequence of epitope peptide is:H362:362EANWVVPSTDVRDL375;The present invention have detected the reactionogenicity and the specificity of antibody of monoclonal antibody and PPR virus, detection monoclonal antibody has good reactionogenicity with rPPRV HN F proteins, the B cell epitope of HN albumen is predicted with reference to Immunoinformatics, candidate's epi-position and monoclonal antibody 10E3 are have detected using Aminated ELISA Plate, establish the corresponding epitope H362 of 10E3, the determination of epitope peptide of the present invention, is that PPR virus epiposition vaccine antigen and diagnostic reagent antigen prepare and provides theoretical foundation.
Description
Technical field
The invention belongs to bioinformatics and immunological technique field, and in particular to a kind of PPR virus HN eggs
White epitope peptide H362 and its determination, preparation method and application.
Background technology
PPR virus (PPRV) belongs to Morbillivirus (Morbillivirus), is to cause goat and sheep etc.
The cause of disease of small ruminant acute infectious disease, the sick feature is high incidence and high mortality, by OIE
(OIE) statutory report zoonosis is classified as, China is classified as I class animal epidemics.Initial report PPR virus
Only infection goat and sheep, but the case that viral inter-species was propagated in recent years is constantly reported that the current disease is distributed mainly on Africa
And Asia, it is positive to threaten Europe.
At present, the main preventive means of the disease is attenuated vaccine immunity, but the vaccine there is heat endurance and virulence is anti-
Strong the problems such as, and it is unfavorable for the global elimination plan of PPR.HN is the glycoprotein being embedded on PPRV cyst membranes, is constituted
The fibre of virion surface is dashed forward.HN albumen can be invaded with the SLAM acceptor interactions mediate retroviral on lymphocyte, therefore
Decision host's preferendum of HN albumen.In addition, factor receptor SLAM is on the immunocytes such as major part and lymphocyte, it may be possible to
PPR virus causes the main cause that immunity of organism suppresses.The cell that PPR virus can cause body strong is exempted from
Epidemic disease and humoral immune response, and HN albumen is then main protective antigens.HN albumen is that vaccine design and detection method are set up
Important target.Therefore, the epitope collection of illustrative plates of HN albumen is drawn and Antibody preparation is significant.
The content of the invention
It is an object of the invention to provide a kind of PPR virus HN Protein Epitopes peptides.
Another object of the present invention is to provide PPR virus HN Protein Epitopes peptide H362 to ruminate small
Application in epizootic disease virus epitopes vaccine antigen and the preparation of diagnostic reagent antigen.
Another object of the present invention is to provide determination, the preparation side of PPR virus HN Protein Epitopes
Method.
The technical solution adopted by the present invention is:A kind of PPR virus HN Protein Epitopes peptides, the antigen table
The amino acid sequence of position peptide is H362:362EANWVVPSTDVRDL375。
A kind of determination of PPR virus HN Protein Epitopes, preparation method, methods described comprise the following steps:
Calculating simulation:
Step one, virtual HN albumen head 3D structures are built with molecular simulation software:Utilize Discovery Studio
V4.5 is to the two target proteins --- and street strain PPRV HN and vaccine strain PPRV HN albumen carry out Blast search;Wherein PPRV
Hw, GenBank accession number are FJ905304;PPRV Hv, GenBank accession number:X74443;
Step 2, search pattern:PDB databases (www.pdb.org) are searched for, the homologous egg parsed by experiment is found
White structure, selection sequence identity is more than 30%, and the longer protein structure of aligned sequences is as formwork structure, carries out
Follow-up calculating;
Step 3, adjusts sequence alignment:Choose after template protein, the space coordinate of albumen obtained from PDB databases,
Obtained template protein sequence is compared with target protein;
Step 4, modeling:Comparison result is submitted into server, according to the space coordinate of template protein and the similitude of sequence
Speculate structure, target protein structure is obtained so as to calculate, i.e., each mould builds the different target protein structure of generation at least five,
The model for selecting DOPE Score minimum while asking PDF Total Energy relatively low is subsequently calculated;
Step 5, optimization:Using the CHARMm field of forces, first carry out Steepest Decent and optimize 5000 steps, then carry out
Conjugate Gradient optimize 2000 steps;
Step 6, evaluation structure:The reasonability of protein structure is assessed using Laplace conformation figure analysis method, mustn't if being located at
Can area non-glycine/proline proportion be no more than 5%, then illustrate simulation protein structure be rational, can carry out
Follow-up calculating analysis;
Prediction based on Immunoinformatics:
Step one, PPRV-HN protein B cell antigen epitopes are predicted:By the amino acid sequence IEDB of PPRV HN albumen,
Immunomedicine Group and BepiPred Immunoinformatics analysis softwares are analyzed, and comprehensive analysis predicts its B cell
Epitope;
Step 2, the synthesis of epitope:GeneScript companies are sent by the epitope amino acid sequence of software prediction
Synthesized with Peptide synthesizer, after synthesis with high performance liquid chromatography (high performance liquid chromatography,
HPLC) purity of analysis Peptide systhesis and the correctness of amino acid;
The preparation of monoclonal antibody:
Step one, animal is immunized:6-8 week old females Balb/c is immunized with reactionogenicity purpose antigen rPPRV-HN-F
Mouse, the subcutaneous 4 points of injections of nape part, immune protein sample size is 50 μ g/, and the μ L/ of volume 200 are immunized only;First immunisation is used
Isometric Freund's complete adjuvant emulsification, secondary immunity and three times it is immune with isometric incomplete Freund's adjuvant adjuvant emulsion;Every
14 days it is immune once, three times it is immune 14 days after antibody in mouse docking blood sampling detection serum, treat that antibody titer is high by 1:After 10000
Four can be carried out to exempt from, four exempt from without adjuvant, intraperitoneal injection;
Step 2, cell fusion:Mouse antibodies potency is higher than 1:10 000, the 4th immune mouse prepares small after three days
Mouse splenic lymphocytes;After mouse anesthesia, eyeball is gone to take mouse peripheral blood, it is sterile to win mouse spleen simultaneously for separating serum
Grinding;SP2/0 cells are mixed about 1 with Mouse spleen cells:5-1:10 ratio is mixed, and 800rpm centrifugations abandon supernatant in 4 minutes,
Cell is mixed again, centrifuge tube is put into 40 DEG C of deionized water, 1mL polyethylene glycol cells were uniformly added into 1 minute and are melted
Mixture, 1mL1640 cell culture fluids were added in 5 seconds, and 15mL1640 cell culture fluids are added, 90 seconds by slow-to-fast,
Terminate fusion reaction;Incubation at room temperature 10 minutes, 800rmp centrifugations abandon supernatant in 4 minutes;With 1640/ containing Peritoneal Cells of Mice
The cell of 20%FBS/HAT culture mediums suspension fusion is laid in 96 orifice plates, 37 DEG C, 5%CO2 environment cultures;
Step 3, the screening and cloning of hybridoma positive colony:Fused cell culture is entered after 14 days to positive cell strain
Row screening, cell culture fluid is detected by rPPRV-HN-F albumen coated elisa plate with indirect elisa method;Select indirect elisa method
The positive hole of detection, then with indirect immunofluorescene assay and the reactionogenicity of PPR virus;Choose Immunofluorescence test sun
Property hole is subcloned;Positive monoclonal cell line is obtained with Endpoint Dilution Method;The positive hole of Immunofluorescence test is trained with 1640
Nutrient solution, which suspends, to be moved into 1.5mL centrifuge tubes, and cell counting count board adjusts the concentration of cell to the cell count in positive cell hole
Cell is diluted to 1/100 μ L to 0.5-2/μ L, then with 1460/20%FBS/HT cell culture fluids, 96 hole cells are laid on
In culture plate, per the μ L1460/20%FBS/HT cell culture fluids of hole 100;Finally, Peritoneal Cells of Mice is contained in addition
1460/20%FBS/HT nutrient solutions 100mL;After 14 days, positive cell strain is screened with same method, such as no positive monoclonal is thin
Born of the same parents' strain, continuation is subcloned to positive hole until obtaining positive monoclonal cell line;It is pre- using limiting dilution assay screening secretion
Determine the cell of monoclonal antibody specific;The positive of monoclonal antibody needed for being produced using indirect ELISA and immunofluorescence screening
Hybridoma;Clonal expansion finally is carried out to required positive hybridoma cell;
Step 4, monoclonal antibody hypotype and titration:
Hypotype is detected according to the specification of monoclonal antibody hypotype detection kit;
Sample-adding:Positive monoclonal cell line cell conditioned medium is added in ELISA Plate sample well, per the μ L of hole 50, without being incubated;
Enzyme-added labeling antibody:1 × IgM+IgG-HRP of sheep anti mouse dilutions are added in ELISA Plate sample well, per the μ L of hole 50,
Mix;
It is incubated:Shrouding film is capped, 1 hour is incubated at room temperature;
Washing:Liquid is removed, is washed 3 times, 2 minutes every time, dried with PBST;
Colour developing:The nitrite ion prepared is added into sample well, per the μ L of hole 100;
It is incubated:The ELISA Plate for having added nitrite ion is placed in light protected environment, room temperature 20 minutes;
Terminate:Terminate liquid is added, per the μ L of hole 100;
Read:Read OD450 or observe, color is most deep or OD value highests are corresponding hypotype;
As a result:The hypotype of 10E3 monoclonal antibodies is IgG2b;
Antibody titer measure is carried out to positive monoclonal cell line cell conditioned medium with indirect ELISA method, it is thin with SP2/0
Born of the same parents' supernatant is negative control+2SD as negative control, critical value, and potency is 1:800;
It is prepared by step 5, monoclonal antibody batch
Culture is enlarged to the positive monoclonal cell line of acquisition, cell and culture medium is collected, cell is noted with abdominal cavity
The mode penetrated is injected into the culture of adult dams abdominal cavity, and the peritoneal fluid of mouse is collected after about 7 days.
The identification of epitope:
The epitope of prediction passes through biosynthesis, and identification meets requirement of experiment, solid phase carrier is used as using Aminated ELISA Plate
Indirect ELISA method carry out;
Dilution:The deionized water synthesized and lyophilized epitope peptide is pressed through with height is diluted to 1 μ g/ μ L;
Epitope peptide is coated with:The epitope peptide diluted is coated on Aminated ELISA Plate, per the μ L coating buffers of hole 50, antigen
Content is 5 μ g, and 4 DEG C overnight;
Board-washing:Liquid in enzyme mark hole is got rid of to the greatest extent as far as possible, about 250 μ LPBST are then added per hole, 3 minutes are stood, weight
It is multiple three times, finally ELISA Plate is patted dry on gauze;
Closing:The μ L of 1 × confining liquid 150 are added into enzyme mark hole, 37 DEG C of incubations are after 1.5 hours, by enzyme mark hole
Confining liquid is got rid of to the greatest extent as far as possible, standby after finally ELISA Plate is patted dry on gauze;
It is incubated primary antibody:Monoclonal antibody is pressed 1 with confining liquid:500 dilutions, add ELISA Plate per the μ L of hole 50, place 37 DEG C
It is incubated 1 hour in incubator;
Board-washing:Ibid walk board-washing;
It is incubated secondary antibody:HRP is marked into anti-mouse IgG secondary antibodies by 1 with confining liquid:5 000 dilutions, add ELISA Plate per the μ of hole 50
L, places in 37 DEG C of incubators and is incubated 1 hour;
Board-washing:Ibid walk board-washing;
Colour developing:50 μ L TMB nitrite ions are added per hole, 37 DEG C of lucifuge is incubated 15 minutes;
Terminate:50 μ L terminate liquids, color development stopping are added per hole;
Read:ELISA Plate is detected at wavelength 450nm with end-point method, OD450nm absorbances are read.
Beneficial effects of the present invention:
PPR virus is inoculated with VeroE6 cells, the reaction of detection monoclonal antibody and PPR virus is former
The specificity of property and antibody.As a result show, monoclonal antibody 10E3 (Fig. 1 left parts) is ruminated with small in Vero cells
Epizootic disease virus reaction, shows stronger green fluorescence, does not have fluorescence (Fig. 1 right parts) with Vero cell effects;SP2/0 is thin
Born of the same parents' culture medium does not react (Fig. 1 center sections) with the PPR virus in Vero cells, without fluorescence.Show, monoclonal
The specific antibody of antibody PPR virus.The monoclonal antibody 10E3 of acquisition is entered with Western-Blotting methods
The specific detection based on Prokaryotic expression, purification rPPRV-HN-F albumen is gone, empty carrier expresses bacterium as negative control, as a result
Show that single band occurs in rPPRV-HN-F albumen swimming lane, and empty carrier expression bacterium swimming lane does not have band (Fig. 2), shows Dan Ke
Grand antibody has good reactionogenicity with rPPRV-HN-F albumen, and is not reacted with empty carrier expression bacterium.Utilize
Discovery Studio v4.5 predict the head construction (figure of the strain HN albumen of PPR virus Nigeria 75/1
3) the B cell epitope of HN albumen, is predicted with reference to Immunoinformatics, candidate's epi-position H362 (Fig. 3 blue portions) is determined, it is artificial synthesized
High-purity small peptide.Candidate's epi-position and monoclonal antibody 10E3 (Fig. 4) are have detected using Aminated ELISA Plate, 10E3 correspondences are established
Epitope H362.
Brief description of the drawings
Fig. 1 is the anti-of fluoroscopic examination 10E3 monoclonal antibodies and rPPRV-HN-F polyclonal antibodies and PPR virus
Answer originality and specificity;
Fig. 2 is 10E3 monoclonal antibodies and the reactionogenicity of rPPRV-HN-F albumen;
Fig. 3 is positions of the candidate's epi-position H362 in PPRV-HN structures;
Fig. 4 is that monoclonal antibody 10E3 indirect ELISAs detect HN Protein Epitopes H362 reactionogenicities.
Embodiment
A kind of PPR virus HN Protein Epitopes peptides of the present invention, the amino acid of the epitope peptide
Sequence is H362:362EANWVVPSTDVRDL375。
The determination of epitope of the present invention, preparation method, method comprise the following steps:
Calculating simulation:
Step one, virtual HN albumen head 3D structures are built with molecular simulation software:Utilize Discovery Studio
V4.5 is to the two target proteins --- and street strain PPRV HN and vaccine strain PPRV HN albumen carry out Blast search;Wherein PPRV
Hw, GenBank accession number are FJ905304;PPRV Hv, GenBank accession number:X74443;
Step 2, search pattern:PDB databases (www.pdb.org) are searched for, the homologous egg parsed by experiment is found
White structure, selection sequence identity is more than 30%, and the longer protein structure of aligned sequences is as formwork structure, carries out
Follow-up calculating;
Step 3, adjusts sequence alignment:Choose after template protein, the space coordinate of albumen obtained from PDB databases,
Obtained template protein sequence is compared with target protein;
Step 4, modeling:Comparison result is submitted into server, according to the space coordinate of template protein and the similitude of sequence
Speculate structure, target protein structure is obtained so as to calculate, i.e., each mould builds the different target protein structure of generation at least five,
The model for selecting DOPE Score minimum while asking PDF Total Energy relatively low is subsequently calculated;
Step 5, optimization:Using the CHARMm field of forces, first carry out Steepest Decent and optimize 5000 steps, then carry out
Conjugate Gradient optimize 2000 steps;
Step 6, evaluation structure:The reasonability of protein structure is assessed using Laplace conformation figure analysis method, mustn't if being located at
Can area non-glycine/proline proportion be no more than 5%, then illustrate simulation protein structure be rational, can carry out
Follow-up calculating analysis;
Prediction based on Immunoinformatics:
Step one, PPRV-HN protein B cell antigen epitopes are predicted:By the amino acid sequence IEDB of PPRV HN albumen,
Immunomedicine Group and BepiPred Immunoinformatics analysis softwares are analyzed, and comprehensive analysis predicts its B cell
Epitope;
Step 2, the synthesis of epitope:GeneScript companies are sent by the epitope amino acid sequence of software prediction
Synthesized with Peptide synthesizer, after synthesis with high performance liquid chromatography (high performance liquid chromatography,
HPLC) purity of analysis Peptide systhesis and the correctness of amino acid;
The preparation of monoclonal antibody:
Step one, animal is immunized:6-8 week old females Balb/c is immunized with reactionogenicity purpose antigen rPPRV-HN-F
Mouse, the subcutaneous 4 points of injections of nape part, immune protein sample size is 50 μ g/, and the μ L/ of volume 200 are immunized only;First immunisation is used
Isometric Freund's complete adjuvant emulsification, secondary immunity and three times it is immune with isometric incomplete Freund's adjuvant adjuvant emulsion;Every
14 days it is immune once, three times it is immune 14 days after antibody in mouse docking blood sampling detection serum, treat that antibody titer is high by 1:After 10000
Four can be carried out to exempt from, four exempt from without adjuvant, intraperitoneal injection;
Step 2, cell fusion:Mouse antibodies potency is higher than 1:10 000, the 4th immune mouse prepares small after three days
Mouse splenic lymphocytes;After mouse anesthesia, eyeball is gone to take mouse peripheral blood, it is sterile to win mouse spleen simultaneously for separating serum
Grinding;SP2/0 cells are mixed about 1 with Mouse spleen cells:5-1:10 ratio is mixed, and 800rpm centrifugations abandon supernatant in 4 minutes,
Cell is mixed again, centrifuge tube is put into 40 DEG C of deionized water, 1mL polyethylene glycol cells were uniformly added into 1 minute and are melted
Mixture, 1mL1640 cell culture fluids were added in 5 seconds, and 15mL1640 cell culture fluids are added, 90 seconds by slow-to-fast,
Terminate fusion reaction;Incubation at room temperature 10 minutes, 800rmp centrifugations abandon supernatant in 4 minutes;With 1640/ containing Peritoneal Cells of Mice
The cell of 20%FBS/HAT culture mediums suspension fusion is laid in 96 orifice plates, 37 DEG C, 5%CO2 environment cultures;
Step 3, the screening and cloning of hybridoma positive colony:Fused cell culture is entered after 14 days to positive cell strain
Row screening, cell culture fluid is detected by rPPRV-HN-F albumen coated elisa plate with indirect elisa method;Select indirect elisa method
The positive hole of detection, then with indirect immunofluorescene assay and the reactionogenicity of PPR virus;Choose Immunofluorescence test sun
Property hole is subcloned;Positive monoclonal cell line is obtained with Endpoint Dilution Method;The positive hole of Immunofluorescence test is trained with 1640
Nutrient solution, which suspends, to be moved into 1.5mL centrifuge tubes, and cell counting count board adjusts the concentration of cell to the cell count in positive cell hole
Cell is diluted to 1/100 μ L to 0.5-2/μ L, then with 1460/20%FBS/HT cell culture fluids, 96 hole cells are laid on
In culture plate, per the μ L1460/20%FBS/HT cell culture fluids of hole 100;Finally, Peritoneal Cells of Mice is contained in addition
1460/20%FBS/HT nutrient solutions 100mL;After 14 days, positive cell strain is screened with same method, such as no positive monoclonal is thin
Born of the same parents' strain, continuation is subcloned to positive hole until obtaining positive monoclonal cell line;It is pre- using limiting dilution assay screening secretion
Determine the cell of monoclonal antibody specific;The positive of monoclonal antibody needed for being produced using indirect ELISA and immunofluorescence screening
Hybridoma;Clonal expansion finally is carried out to required positive hybridoma cell;
Step 4, monoclonal antibody hypotype and titration:
Hypotype is detected according to the specification of monoclonal antibody hypotype detection kit;
Sample-adding:Positive monoclonal cell line cell conditioned medium is added in ELISA Plate sample well, per the μ L of hole 50, without being incubated;
Enzyme-added labeling antibody:1 × IgM+IgG-HRP of sheep anti mouse dilutions are added in ELISA Plate sample well, per the μ L of hole 50,
Mix;
It is incubated:Shrouding film is capped, 1 hour is incubated at room temperature;
Washing:Liquid is removed, is washed 3 times, 2 minutes every time, dried with PBST;
Colour developing:The nitrite ion prepared is added into sample well, per the μ L of hole 100;
It is incubated:The ELISA Plate for having added nitrite ion is placed in light protected environment, room temperature 20 minutes;
Terminate:Terminate liquid is added, per the μ L of hole 100;
Read:Read OD450 or observe, color is most deep or OD value highests are corresponding hypotype;
As a result:The hypotype of 10E3 monoclonal antibodies is IgG2b;
Antibody titer measure is carried out to positive monoclonal cell line cell conditioned medium with indirect ELISA method, it is thin with SP2/0
Born of the same parents' supernatant is negative control+2SD as negative control, critical value, and potency is 1:800;
It is prepared by step 5, monoclonal antibody batch
Culture is enlarged to the positive monoclonal cell line of acquisition, cell and culture medium is collected, cell is noted with abdominal cavity
The mode penetrated is injected into the culture of adult dams abdominal cavity, and the peritoneal fluid of mouse is collected after about 7 days.
The identification of epitope:
The epitope of prediction passes through biosynthesis, and identification meets requirement of experiment, solid phase carrier is used as using Aminated ELISA Plate
Indirect ELISA method carry out;
Dilution:The deionized water synthesized and lyophilized epitope peptide is pressed through with height is diluted to 1 μ g/ μ L;
Epitope peptide is coated with:The epitope peptide diluted is coated on Aminated ELISA Plate, per the μ L coating buffers of hole 50, antigen
Content is 5 μ g, and 4 DEG C overnight;
Board-washing:Liquid in enzyme mark hole is got rid of to the greatest extent as far as possible, about 250 μ LPBST are then added per hole, 3 minutes are stood, weight
It is multiple three times, finally ELISA Plate is patted dry on gauze;
Closing:The μ L of 1 × confining liquid 150 are added into enzyme mark hole, 37 DEG C of incubations are after 1.5 hours, by enzyme mark hole
Confining liquid is got rid of to the greatest extent as far as possible, standby after finally ELISA Plate is patted dry on gauze;
It is incubated primary antibody:Monoclonal antibody is pressed 1 with confining liquid:500 dilutions, add ELISA Plate per the μ L of hole 50, place 37 DEG C
It is incubated 1 hour in incubator;
Board-washing:Ibid walk board-washing;
It is incubated secondary antibody:HRP is marked into anti-mouse IgG secondary antibodies by 1 with confining liquid:5 000 dilutions, add ELISA Plate per the μ of hole 50
L, places in 37 DEG C of incubators and is incubated 1 hour;
Board-washing:Ibid walk board-washing;
Colour developing:50 μ L TMB nitrite ions are added per hole, 37 DEG C of lucifuge is incubated 15 minutes;
Terminate:50 μ L terminate liquids, color development stopping are added per hole;
Read:ELISA Plate is detected at wavelength 450nm with end-point method, OD450nm absorbances are read.
By Fig. 1 it is obvious that VeroE6 cells be inoculated with PPR virus, detection monoclonal antibody 10E3 with
The reactionogenicity of PPR virus and the specificity of antibody, as a result show, in monoclonal antibody 10E3 and Vero cells
PPR virus reaction, show stronger green fluorescence (Fig. 1 left parts), there is no fluorescence with Vero cell effects
(Fig. 1 right parts);SP2/0 cell culture mediums do not react with the PPR virus in Vero cells, without fluorescence (Fig. 1
Center section).Show, the specific antibody of monoclonal antibody PPR virus.
By Fig. 2 it is obvious that 10E3 monoclonal antibodies and rPPRV-HN-F albumen have good reactionogenicity and
Specificity.
1:There is single band in rPPRV-HN-F albumen swimming lane, and with it is expected consistent, illustrate monoclonal antibody tool
There is preferable reactionogenicity;2:There is not band in empty carrier Host Strains lysate swimming lane, illustrates that monoclonal antibody has good
Specificity.
By Fig. 3 it is obvious that blue portion is epitope H362 in figure, this it appears that should from 3D structures
Epitope is located at the surface more prominent place of antigen, and this is the important original that the corresponding antibody of the epitope has sound response originality
Cause.
By Fig. 4 it is obvious that detecting epitope H362 reactionogenicities, monoclonal antibody with indirect ELISA method
OD450 values (the p that the OD450 values of group detection are extremely significantly detected with SP2/0 cell culture mediums group<0.00001) table, is shown
Position has good reactionogenicity with monoclonal antibody.
The epitope peptide H362 identified by above scheme, is that PPR virus epiposition vaccine antigen and diagnostic reagent are anti-
Research and development prepared by original provide theoretical foundation, and the preventing and treating to PPR virus is significant.
The present invention is not limited to above-mentioned preferred forms, and anyone can show that other are various under the enlightenment of the present invention
The product of form, however, make any change in its shape or structure, it is every that there is skill identical or similar to the present application
Art scheme, is within the scope of the present invention.
Claims (3)
1. a kind of PPR virus HN Protein Epitopes peptides, it is characterised in that:The amino acid sequence of the epitope peptide
It is classified as H362:362EANWVVPSTDVRDL375。
2. a kind of PPR virus HN Protein Epitopes peptides H362 is in PPR virus according to claim 1
Application in epiposition vaccine antigen and the preparation of diagnostic reagent antigen.
3. a kind of determination of PPR virus HN Protein Epitopes, preparation method, its feature according to claim 1
It is:Methods described comprises the following steps:
Calculating simulation:
Step one, virtual HN albumen head 3D structures are built with molecular simulation software:Utilize Discovery Studio V4.5 couple
The two target proteins --- street strain PPRV HN and vaccine strain PPRV HN albumen carry out Blast search;Wherein PPRV Hw,
GenBank accession number is FJ905304;PPRV Hv, GenBank accession number:X74443;
Step 2, search pattern:PDB databases (www.pdb.org) are searched for, are found by testing the homologous protein parsed
Structure, selection sequence identity is more than 30%, and the longer protein structure of aligned sequences is as formwork structure, carries out follow-up
Calculating;
Step 3, adjusts sequence alignment:Choose after template protein, the space coordinate of albumen is obtained from PDB databases, will
To template protein sequence be compared with target protein;
Step 4, modeling:Comparison result is submitted into server, speculated according to the similitude of the space coordinate of template protein and sequence
Structure, target protein structure is obtained so as to calculate, i.e., each mould builds the different target protein structure of generation at least five, it is desirable to PDF
The model for selecting DOPE Score minimum while Total Energy are relatively low is subsequently calculated;
Step 5, optimization:Using the CHARMm field of forces, first carry out Steepest Decent and optimize 5000 steps, then carry out
Conjugate Gradient optimize 2000 steps;
Step 6, evaluation structure:The reasonability of protein structure is assessed using Laplace conformation figure analysis method, area is disapproved if being located at
Non- glycine/proline proportion be no more than 5%, then illustrate that the protein structure of simulation is rational, can carry out follow-up
Calculating analysis;
Prediction based on Immunoinformatics:
Step one, PPRV-HN protein B cell antigen epitopes are predicted:By the amino acid sequence IEDB of PPRV HN albumen,
Immunomedicine Group and BepiPred Immunoinformatics analysis softwares are analyzed, and comprehensive analysis predicts its B cell
Epitope;
Step 2, the synthesis of epitope:GeneScript companies are sent to use the epitope amino acid sequence of software prediction many
Peptide synthesizer synthesize, after synthesis with high performance liquid chromatography (high performance liquid chromatography,
HPLC) purity of analysis Peptide systhesis and the correctness of amino acid;
The preparation of monoclonal antibody:
Step one, animal is immunized:6-8 week old female Balb/c mouse are immunized with reactionogenicity purpose antigen rPPRV-HN-F,
The subcutaneous 4 points of injections of nape part, immune protein sample size is 50 μ g/, and the μ L/ of volume 200 are immunized only;First immunisation is with equal volume
Freund's complete adjuvant is emulsified, and secondary immunity and three times are immune with isometric incomplete Freund's adjuvant adjuvant emulsion;Exempted from every 14 days
Once, the antibody after three times immune 14 days in mouse docking blood sampling detection serum treats that antibody titer is high by 1 to epidemic disease:It can enter after 10000
Row four is exempted from, and four exempt from without adjuvant, intraperitoneal injection;
Step 2, cell fusion:Mouse antibodies potency is higher than 1:10 000, the 4th immune mouse prepares mice spleen after three days
Lymphocyte;After mouse anesthesia, eyeball is gone to take mouse peripheral blood, it is sterile to win mouse spleen and grind for separating serum;
SP2/0 cells are mixed about 1 with Mouse spleen cells:5-1:10 ratio is mixed, and supernatant is abandoned in 800rpm centrifugations for 4 minutes, will be thin
Born of the same parents are mixed again, and centrifuge tube is put into 40 DEG C of deionized water, and 1mL polyethylene glycol cell fusion agent was uniformly added into 1 minute,
1mL1640 cell culture fluids were added in 5 seconds, and add 15mL1640 cell culture fluids, are melted by slow-to-fast, termination within 90 seconds
Close reaction;Incubation at room temperature 10 minutes, 800rmp centrifugations abandon supernatant in 4 minutes;With the 1640/20%FBS/ containing Peritoneal Cells of Mice
The cell of HAT culture mediums suspension fusion is laid in 96 orifice plates, 37 DEG C, 5%CO2 environment cultures;
Step 3, the screening and cloning of hybridoma positive colony:Fused cell culture is sieved after 14 days to positive cell strain
Choosing, cell culture fluid is detected by rPPRV-HN-F albumen coated elisa plate with indirect elisa method;Select indirect elisa method detection
Positive hole, then with indirect immunofluorescene assay and the reactionogenicity of PPR virus;Choose the positive hole of Immunofluorescence test
It is subcloned;Positive monoclonal cell line is obtained with Endpoint Dilution Method;By the positive hole 1640 culture medium of Immunofluorescence test
Suspend and move into 1.5mL centrifuge tubes, the concentration of cell is adjusted to by cell counting count board to the cell count in positive cell hole
0.5-2/μ L, then cell is diluted to 1/100 μ L with 1460/20%FBS/HT cell culture fluids, it is laid on 96 hole cells trainings
Support in plate, per the μ L1460/20%FBS/HT cell culture fluids of hole 100;Finally, 1460/ containing Peritoneal Cells of Mice is being added
20%FBS/HT nutrient solutions 100mL;After 14 days, positive cell strain, such as no positive monoclonal cell strain are screened with same method,
Continuation is subcloned to positive hole until obtaining positive monoclonal cell line;It is predetermined special using limiting dilution assay screening secretion
The cell of property monoclonal antibody;The positive hybridoma of monoclonal antibody needed for being produced using indirect ELISA and immunofluorescence screening
Cell;Clonal expansion finally is carried out to required positive hybridoma cell;
Step 4, monoclonal antibody hypotype and titration:
Hypotype is detected according to the specification of monoclonal antibody hypotype detection kit;
Sample-adding:Positive monoclonal cell line cell conditioned medium is added in ELISA Plate sample well, per the μ L of hole 50, without being incubated;
Enzyme-added labeling antibody:1 × IgM+IgG-HRP of sheep anti mouse dilutions are added in ELISA Plate sample well, per the μ L of hole 50, mixed;
It is incubated:Shrouding film is capped, 1 hour is incubated at room temperature;
Washing:Liquid is removed, is washed 3 times, 2 minutes every time, dried with PBST;
Colour developing:The nitrite ion prepared is added into sample well, per the μ L of hole 100;
It is incubated:The ELISA Plate for having added nitrite ion is placed in light protected environment, room temperature 20 minutes;
Terminate:Terminate liquid is added, per the μ L of hole 100;
Read:Read OD450 or observe, color is most deep or OD value highests are corresponding hypotype;
As a result:The hypotype of 10E3 monoclonal antibodies is IgG2b;
Antibody titer measure is carried out to positive monoclonal cell line cell conditioned medium with indirect ELISA method, with SP2/0 cell conditioned mediums
As negative control, critical value is negative control+2SD, and potency is 1:800;
It is prepared by step 5, monoclonal antibody batch:
Culture is enlarged to the positive monoclonal cell line of acquisition, collects cell and culture medium, by cell to be injected intraperitoneally
Mode is injected into the culture of adult dams abdominal cavity, and the peritoneal fluid of mouse is collected after about 7 days;
The identification of epitope:
The epitope of prediction passes through biosynthesis, and identification meets requirement of experiment, using Aminated ELISA Plate as between solid phase carrier
Connect ELISA method progress;
Dilution:The deionized water synthesized and lyophilized epitope peptide is pressed through with height is diluted to 1 μ g/ μ L;
Epitope peptide is coated with:The epitope peptide diluted is coated on Aminated ELISA Plate, per the μ L coating buffers of hole 50, the content of antigen
For 5 μ g, 4 DEG C overnight;
Board-washing:Liquid in enzyme mark hole is got rid of to the greatest extent as far as possible, about 250 μ LPBST are then added per hole, 3 minutes are stood, three are repeated
It is secondary, finally ELISA Plate is patted dry on gauze;
Closing:The μ L of 1 × confining liquid 150 are added into enzyme mark hole, 37 DEG C of incubations are after 1.5 hours, by the closing in enzyme mark hole
Liquid is got rid of to the greatest extent as far as possible, standby after finally ELISA Plate is patted dry on gauze;
It is incubated primary antibody:Monoclonal antibody is pressed 1 with confining liquid:500 dilutions, add ELISA Plate per the μ L of hole 50, place 37 DEG C of incubators
It is middle to be incubated 1 hour;
Board-washing:Ibid walk board-washing;
It is incubated secondary antibody:HRP is marked into anti-mouse IgG secondary antibodies by 1 with confining liquid:5 000 dilutions, add ELISA Plate per the μ L of hole 50, put
Put in 37 DEG C of incubators and be incubated 1 hour;
Board-washing:Ibid walk board-washing;
Colour developing:50 μ L TMB nitrite ions are added per hole, 37 DEG C of lucifuge is incubated 15 minutes;
Terminate:50 μ L terminate liquids, color development stopping are added per hole;
Read:ELISA Plate is detected at wavelength 450nm with end-point method, OD450nm absorbances are read.
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