CN106350530A - Keratinase and gene sequence and application method thereof - Google Patents
Keratinase and gene sequence and application method thereof Download PDFInfo
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Abstract
本发明提供了一种基于宏基因组技术挖掘的角蛋白酶及其基因编码序列与应用方法。该角蛋白酶基因全长1,152bp,编码384个氨基酸;以大肠杆菌E.coli为例,成功实现了该角蛋白酶基因的异源表达。该角蛋白酶基因的获取方法方便可行,将该基因进行重组表达,构建的重组菌株经过诱导可以分泌角蛋白酶,能有效水解可溶性角蛋白、酪蛋白、羊毛、羽毛等底物,在角蛋白废弃物生物降解、饲料加工、洗涤添加剂、材料生物合成、透皮药物制备等领域具有良好的应用价值。该角蛋白酶的最适反应温度为55℃,最适反应pH为10.0,且该角蛋白酶对表面活性剂表现出较好的耐受性,酶稳定性较好。重组菌发酵周期短,适合于工业化大规模的生产。
The invention provides a keratinase and its gene coding sequence and application method mined based on the metagenomic technology. The full length of the keratinase gene is 1,152bp, encoding 384 amino acids; taking Escherichia coli E.coli as an example, the heterologous expression of the keratinase gene was successfully realized. The acquisition method of the keratinase gene is convenient and feasible. The gene is recombined and expressed, and the recombinant strain constructed can secrete keratinase after being induced, which can effectively hydrolyze soluble keratin, casein, wool, feather and other substrates. It has good application value in fields such as biodegradation, feed processing, detergent additives, material biosynthesis, and transdermal drug preparation. The optimum reaction temperature of the keratinase is 55° C., and the optimum reaction pH is 10.0, and the keratinase shows good tolerance to surfactants, and the enzyme stability is good. The recombinant bacterium has a short fermentation cycle and is suitable for large-scale industrial production.
Description
技术领域technical field
本发明提供了一种基于宏基因组技术挖掘的角蛋白酶及其基因编码序列与应用方法。属于基因工程及酶工程技术领域。The invention provides a keratinase and its gene coding sequence and application method mined based on the metagenomic technology. The invention belongs to the technical field of genetic engineering and enzyme engineering.
背景技术Background technique
角蛋白是一类主要存在于爬行动物、鸟类、两栖动物、哺乳动物的组织中具有结缔和保护功能的纤维状蛋白质,富含半胱氨酸,赖氨酸,脯氨酸和丝氨酸.角蛋白是羽毛,头发,指甲,角,蹄,骨头,皮草,爪子,兽皮,鸟喙,皮肤,羊毛,鳞屑,猪鬃的主要组成物质.由于角蛋白中含有较多起交联作用的的二硫键,所以具有较高的机械强度,不容易被降解,对胃蛋白酶、胰蛋白酶、木瓜蛋白酶的水解作用有很强的抵抗力.事实上,每年都有几千吨的羽毛被废弃,对环境造成了巨大的污染,因此找到一个快速、简单、廉价、绿色的降解方式成为了本领域的研究热点。Keratin is a kind of fibrous protein with connective and protective functions mainly found in the tissues of reptiles, birds, amphibians and mammals, rich in cysteine, lysine, proline and serine. Keratin Protein is the main component of feathers, hair, nails, horns, hooves, bones, fur, claws, hides, beaks, skin, wool, scales, and bristles. Since keratin contains more bismuth that acts as a cross-link Sulfur bonds, so it has high mechanical strength, is not easy to be degraded, and has strong resistance to the hydrolysis of pepsin, trypsin, and papain. In fact, thousands of tons of feathers are discarded every year. The environment has caused huge pollution, so finding a fast, simple, cheap and green degradation method has become a research hotspot in this field.
角蛋白酶大多属于胞外的丝氨酸蛋白酶类,是一类比其他蛋白酶能更有效水解角蛋白等顽固蛋白质的酶.角蛋白酶同时具有二硫键还原酶和多肽水解酶的活性,能够特异性降解角蛋白。因此利用角蛋白酶降解羽毛等角蛋白废弃物既是一种环境友好型的生物处理过程,又可回收水解产物用作动物饲料,创造利益。Keratinases mostly belong to extracellular serine proteases, which are enzymes that can hydrolyze stubborn proteins such as keratin more effectively than other proteases. Keratinases have both disulfide bond reductase and polypeptide hydrolase activities, and can specifically degrade keratin . Therefore, the use of keratinase to degrade keratin waste such as feathers is not only an environmentally friendly biological treatment process, but also the hydrolyzate can be recycled and used as animal feed to create benefits.
目前已报道的天然角蛋白酶生产菌株的产量整体不高,且给角蛋白酶的分离提纯也带来了一定挑战.随着分子生物学与基因工程技术的快速发展,研究角蛋白酶基因在异源宿主的克隆和高效表达成为了当前本领域的发展趋势,Liu等将Bacilluslicheniformis中的角蛋白酶重组到枯草芽孢杆菌WB600中进行了高效的表达,并将其应用在羊毛纺织业中(Liu B.,et al,World Journal of Microbiology and Biotechnology,2013,29(5):825-832);HSIN-HUNG LIN等将绿脓假单胞菌中的角蛋白基因转入毕赤酵母并实现了成功表达,且未发生糖基化修饰(Lin H.H.,Journal of Agricultural&FoodChemistry,2009,57(17):7779-7784),该组还将此基因分别转入到枯草芽孢杆菌DB104和大肠杆菌AD494(DE3)pLsS中,均实现成功表达(Lin H.H.,,Journal of Agricultural&Food Chemistry,2009,57(9):3506-11);Lian Yang等构建了一个快速降解羽毛的菌株,他们通过将枯草芽孢杆菌SCK6角蛋白酶基因转入其亲缘菌株解淀粉芽孢杆菌K11中,实现了过量表达(Yang L.,et al,Journal of Agricultural&Food Chemistry,2016,64(1):78–84)。The production of the reported natural keratinase production strains is not high overall, and it also brings some challenges to the isolation and purification of keratinase. With the rapid development of molecular biology and genetic engineering technology, the study of keratinase gene in heterologous hosts The cloning and high-efficiency expression of Bacillus licheniformis have become the current development trend in this field. Liu et al. recombined the keratinase in Bacillus licheniformis into Bacillus subtilis WB600 and carried out high-efficiency expression, and applied it in the wool textile industry (Liu B., et al. al, World Journal of Microbiology and Biotechnology, 2013,29(5):825-832); HSIN-HUNG LIN etc. transferred the keratin gene in Pseudomonas aeruginosa into Pichia pastoris and successfully expressed it, and No glycosylation modification occurred (Lin H.H., Journal of Agricultural & Food Chemistry, 2009, 57(17): 7779-7784), and the group also transferred this gene into Bacillus subtilis DB104 and Escherichia coli AD494(DE3)pLsS respectively, All achieved successful expression (Lin H.H.,, Journal of Agricultural & Food Chemistry, 2009,57(9):3506-11); Lian Yang et al. constructed a strain that rapidly degrades feathers, and they transferred the Bacillus subtilis SCK6 keratinase gene into In its relative strain Bacillus amyloliquefaciens K11, overexpression was achieved (Yang L., et al, Journal of Agricultural & Food Chemistry, 2016, 64(1):78–84).
目前国内角蛋白酶的研究多处于对菌株的分离、筛选、角蛋白酶的分离纯化以及理化性质的研究阶段,在分子生物学方面,相关基因的克隆与表达的研究还相对报道较少。本发明通过宏基因组技术得到了一种角蛋白酶及其编码基因,并对该角蛋白酶基因在异源宿主中进行了异源表达,研究了其酶学性质,考察了该酶的工业应用潜力,为未来角蛋白酶相关研究奠定了基础。虽然该段基因与NCBI数据库中已报道的Bacillus tequilensis、Bacillus pumilus、Bacillus circulans、Bacillus safensis等角蛋白酶编码基因具有较高的同源性,但是本发明所采用角蛋白酶与已报道同类酶表现出不同的酶学性质,该角蛋白酶的最适反应温度为55℃,最适反应pH为10.0;不同金属离子对酶活影响具有差异;该角蛋白酶基因编码的角蛋白酶表现出较好的表面活性剂耐受性;而且该酶具有较广泛的底物谱,低胶原活性,高角蛋白活性,表现出良好的应用前景。At present, domestic keratinase research is mostly in the stage of isolation, screening, separation and purification of keratinase, and research on physical and chemical properties. In terms of molecular biology, there are relatively few reports on the cloning and expression of related genes. The present invention obtains a keratinase and its coding gene through the metagenomic technology, and performs heterologous expression of the keratinase gene in a heterologous host, studies its enzymatic properties, and investigates the industrial application potential of the enzyme, It laid the foundation for future research on keratinase. Although this section of gene has high homology with keratinase coding genes such as Bacillus tequilensis, Bacillus pumilus, Bacillus circulans, Bacillus safensis reported in the NCBI database, the keratinase used in the present invention shows differences with reported similar enzymes The optimum reaction temperature of the keratinase is 55°C, and the optimum reaction pH is 10.0; different metal ions have different effects on the enzyme activity; the keratinase encoded by the keratinase gene shows better surfactant Tolerance; and the enzyme has a wider substrate spectrum, low collagen activity, high keratin activity, showing good application prospects.
发明内容Contents of the invention
本发明的目的是提供一种基于宏基因组技术挖掘的角蛋白酶及其基因编码序列与应用方法。提供包含本发明基因的质粒及包含该表达质粒的宿主细胞,以及利用该重组菌株表达生产角蛋白酶的方法。The purpose of the present invention is to provide a kind of keratinase and its gene coding sequence and application method excavated based on metagenomic technology. The invention provides a plasmid containing the gene of the present invention, a host cell containing the expression plasmid, and a method for expressing and producing keratinase using the recombinant strain.
本发明的技术方案是:Technical scheme of the present invention is:
基于宏基因组技术,通过构建Fosmid文库筛选土壤宏基因组中的角蛋白酶基因。以土壤宏基因组为模板,建立基因文库,筛选获得目的角蛋白酶基因,根据测序结果进一步设计引物通过PCR技术扩增获得编码基因序列,电泳鉴定后回收纯化PCR产物并克隆至pMD19-T载体构建重组质粒,将重组质粒转化至E.coli JM 109,挑取多个阳性转化子至LB液体培养基中(Ampr)37℃,220rpm培养10~12h,提取质粒后进行双酶切、PCR验证.将验证正确的重组质粒经BamH Ⅰ和HindⅢ双酶切后与经同样双酶切的载体质粒进行连接,选择的载体质粒包括pET系列,pMA5,pWB系列,pPICZα,PIC9K,pDXW系列等。连接产物转化至宿主菌大肠杆菌感受态细胞中、但不局限于大肠杆菌,还包括丝状真菌,枯草芽孢杆菌,谷氨酸棒杆菌,钝齿棒杆菌,毕赤酵母,酿酒酵母等,经培养后实现角蛋白酶的高效表达。Based on metagenomic technology, the keratinase gene in soil metagenomics was screened by constructing Fosmid library. Using the soil metagenome as a template, a gene library was established, and the target keratinase gene was obtained by screening. According to the sequencing results, primers were further designed and the coding gene sequence was amplified by PCR technology. After electrophoresis identification, the purified PCR product was recovered and cloned into the pMD19-T vector to construct recombination Plasmid: Transform the recombinant plasmid into E.coli JM 109, pick multiple positive transformants and put them in LB liquid medium (Amp r ) at 37°C, 220rpm and culture for 10-12h, extract the plasmid and carry out double enzyme digestion and PCR verification. The correct recombinant plasmids will be digested by BamH Ⅰ and Hind Ⅲ and connected to the vector plasmids that have been digested by the same double enzymes. The selected vector plasmids include pET series, pMA5, pWB series, pPICZα, PIC9K, pDXW series, etc. The ligation product is transformed into competent cells of host bacteria Escherichia coli, but not limited to Escherichia coli, but also includes filamentous fungi, Bacillus subtilis, Corynebacterium glutamicum, Corynebacterium blunt tooth, Pichia pastoris, Saccharomyces cerevisiae, etc., after High-efficiency expression of keratinase was achieved after cultivation.
(1)宏基因组技术筛选角蛋白酶基因(1) Screening of keratinase genes by metagenomic technology
从皮革厂堆放皮毛的地方收集土样,提取样品总DNA,构建Fosmid文库,用牛奶平板进行初筛,以可溶性角蛋白为底物测定酶活,复筛阳性转化子,对表现出角蛋白酶活的转化子进行质粒提取并测序,获得角蛋白酶编码基因。Soil samples were collected from the place where furs were piled up in the tannery, the total DNA of the samples was extracted, and the Fosmid library was constructed. The milk plate was used for primary screening, and soluble keratin was used as the substrate to determine the enzyme activity. The positive transformants were re-screened and showed keratinase activity. The transformants were extracted and sequenced to obtain the gene encoding keratinase.
(2)PCR扩增角蛋白酶基因(2) PCR amplification of keratinase gene
以土壤宏基因组为模板,根据测序得到的核苷酸序列设计引物(P1、P2),通过PCR扩增角蛋白酶的编码基因:Using the soil metagenome as a template, primers (P1, P2) were designed according to the nucleotide sequence obtained by sequencing, and the coding gene of keratinase was amplified by PCR:
引物P1:5’-CGCGGATCCTGAAAAAAGCTATATTGTTGG-3’(BamH Ⅰ)Primer P1: 5'-CGCGGATCCTGAAAAAAGCTATATTGTTGG-3'(BamH Ⅰ)
引物P2:5’-CCCAAGCTTCTCGAGTTAGTTAGAAGCTG-3’(HindⅢ)Primer P2: 5'-CCCAAGCTTCTCGAGTTAGTTAGAAGCTG-3'(HindⅢ)
PCR扩增反应在50μL体系中进行,反应体系中加入25μL Ex(Premix),20μLddH2O,2μL模板DNA,上下游引物个1.5μL。反应条件为在94℃预变性3min后开始循环:94℃变性30s,57℃退火30s,72℃延伸1min,共30个循环;72℃终延伸10min。PCR产物进行核酸电泳鉴定并割胶回收纯化,回收产物克隆至pMD19-T载体构建重组克隆质粒,将质粒转化至E.coli JM 109,挑取多个阳性转化子至LB液体培养基中(Ampr)37℃,220rpm培养10~12h,提取质粒后对质粒进行双酶切、PCR验证,验证正确的进行序列测定。The PCR amplification reaction was carried out in a 50 μL system, and 25 μL of Ex was added to the reaction system (Premix), 20 μL ddH2O, 2 μL template DNA, 1.5 μL upstream and downstream primers. The reaction conditions were 30 cycles of denaturation at 94°C for 3 minutes: denaturation at 94°C for 30 s, annealing at 57°C for 30 s, extension at 72°C for 1 min, and a total of 30 cycles; final extension at 72°C for 10 min. The PCR products were identified by nucleic acid electrophoresis, recovered and purified by tapping the gel, and the recovered products were cloned into the pMD19-T vector to construct a recombinant cloning plasmid. The plasmid was transformed into E.coli JM 109, and multiple positive transformants were picked and placed in LB liquid medium (Amp r ) at 37° C., 220 rpm for 10-12 hours, and after extracting the plasmid, double enzyme digestion and PCR verification were performed on the plasmid, and sequence determination was performed to verify correctness.
(3)重组表达质粒的构建(3) Construction of recombinant expression plasmids
本研究表达质粒pET-28a(+)为例,该质粒带有T7启动子和6×His-tag标签,将pET-28a(+)质粒和验证正确的含有目的基因的重组克隆质粒同时用BamH Ⅰ和HindⅢ进行双酶切,37℃酶切3h后进行核酸电泳验证并割胶回收目的基因和目的质粒,回收产物用T4DNA连接酶在16℃过夜连接,连接产物转化至E.coli JM 109感受态细胞中,在含卡那霉素抗性(50mg/L)的LB培养过夜培养,挑取多个阳性转化子至含卡那霉素的LB液体培养基中在37℃,220rpm条件下培养10~12h后提取质粒并命名为pET-28a(+)-ker.In this study, the expression plasmid pET-28a(+) was taken as an example. This plasmid has a T7 promoter and a 6×His-tag tag. Ⅰ and HindⅢ were subjected to double enzyme digestion, 37°C for 3 hours, followed by nucleic acid electrophoresis verification and gel tapping to recover the target gene and target plasmid. The recovered product was ligated with T4 DNA ligase at 16°C overnight, and the ligated product was transformed into E.coli JM 109 competent Cells were cultured overnight in LB containing kanamycin resistance (50mg/L), and multiple positive transformants were picked and cultured in LB liquid medium containing kanamycin at 37°C and 220rpm for 10 ~12h later, the plasmid was extracted and named pET-28a(+)-ker.
(4)重组表达菌株的构建与筛选(4) Construction and screening of recombinant expression strains
本研究以大肠杆菌为例,研究将重组质粒pET-28a(+)-ker经42℃热击90s转化至大肠杆菌宿主E.coli BL21(DE3)感受态细胞中,在含卡那霉素抗性(50mg/L)的LB培养过夜培养,通过PCR验证筛选阳性转化子E.coli BL21(DE3)/pET-28a(+)-ker,接种至含卡那霉素抗性(50mg/L)的LB培养基中过夜培养。次日按1%接种量转接于50mL新鲜LB液体培养基(含Kanr 50mg/L),于37℃培养约3h,待OD600nm约为0.6~0.8时,加入0.5mM的诱导剂IPTG50μL,20℃诱导16h后,重组菌表现出角蛋白酶活性。In this study, taking Escherichia coli as an example, the recombinant plasmid pET-28a(+)-ker was transformed into E. coli host E.coli BL21(DE3) competent cells after heat shock at 42°C for 90s. (50mg/L) LB was cultured overnight, and the positive transformant E.coli BL21(DE3)/pET-28a(+)-ker was screened by PCR verification, and inoculated to the cells containing kanamycin resistance (50mg/L) overnight in LB medium. The next day, transfer 1% of the inoculum to 50 mL of fresh LB liquid medium (containing Kan r 50 mg/L), culture at 37°C for about 3 hours, and when the OD600nm is about 0.6-0.8, add 50 μL of 0.5 mM inducer IPTG, 20 After induction at ℃ for 16 hours, the recombinant bacteria showed keratinase activity.
(5)重组角蛋白酶的分离纯化(5) Separation and purification of recombinant keratinase
将上述获得的重组菌发酵液在4℃,8,000rpm条件下离心20min,去掉上清收集菌体沉淀,菌体用10mL Tris-HCl(pH 9.0)缓冲液清洗一遍去除杂质,8,000rpm离心10min,再次去掉上清收集菌体沉淀,用5mL Tris-HCl(pH9.0)缓冲液悬浮,制备成菌悬液.将菌悬液在置于冰水浴中利用细胞超声破碎仪进行超声破碎,条件为:200W功率下工作200个循环,每个循环工作3s停7s。取破碎样品结晶紫染色,进行镜检,直到显示细胞破裂完全为止。细胞裂解破在4℃,8,000rpm条件下离心30min,所得上清即为粗酶液。将无细胞抽提液用0.22μm水膜过滤,制备上样样品,将Ni-NTA琼脂糖凝胶柱用Binding Buffer(20mM NaH2PO4,500mM NaCl,10mM咪唑,8M尿素)冲洗10个柱床体积,流速为5mL/min,直至平衡;将待纯化样品上样,流速为1.5mL/min;用Binding Buffer再冲洗10个柱床体积,流速为5mL/min;用0-100%的Elution Buffer(20mM NaH2PO4,500mM NaCl,500mM咪唑,8M尿素)进行线性洗脱,洗脱25个柱床体积,流速为5mL/min,洗脱过程实时监控UV280nm,收集洗脱峰样品,通过SDS-PAGE分析角蛋白酶纯化样品的分子量大小及纯度。Centrifuge the recombinant bacterial fermentation broth obtained above at 4°C and 8,000rpm for 20min, remove the supernatant to collect the cell pellet, wash the cell with 10mL Tris-HCl (pH 9.0) buffer to remove impurities, and centrifuge at 8,000rpm for 10min. Remove the supernatant again to collect the bacterial precipitate, suspend it with 5mL Tris-HCl (pH9.0) buffer solution, and prepare a bacterial suspension. Place the bacterial suspension in an ice-water bath and use a cell ultrasonic disruptor for ultrasonic disruption. The conditions are: : Work 200 cycles under 200W power, each cycle works for 3s and stops for 7s. The broken sample was stained with crystal violet and examined under the microscope until the cell rupture was complete. The lysed cells were centrifuged at 4°C and 8,000 rpm for 30 minutes, and the obtained supernatant was the crude enzyme solution. Filter the cell-free extract with a 0.22 μm water membrane to prepare the loading sample, wash the Ni-NTA agarose gel column with Binding Buffer (20mM NaH2PO4, 500mM NaCl, 10mM imidazole, 8M urea) for 10 column bed volumes, The flow rate is 5mL/min until equilibrium; load the sample to be purified, the flow rate is 1.5mL/min; wash 10 column bed volumes with Binding Buffer, the flow rate is 5mL/min; use 0-100% Elution Buffer (20mM NaH2PO4, 500mM NaCl, 500mM imidazole, 8M urea) for linear elution, elution of 25 column bed volumes, flow rate of 5mL/min, real-time monitoring of the elution process UV 280nm , collecting elution peak samples, and analyzing angles by SDS-PAGE The molecular weight and purity of protease purification samples.
(6)重组角蛋白酶的酶学性质研究(6) Study on the Enzymatic Properties of Recombinant Keratinase
A.重组角蛋白酶最适pH及pH稳定性的测定A. Determination of optimum pH and pH stability of recombinant keratinase
分别配制不同pH的100mM的B-R缓冲液,用不同pH的缓冲液配制1%的角蛋白溶液,并用不同pH缓冲液适当稀释酶液,然后在上述pH条件下测定酶活,以酶活最高者作为100%.Prepare 100mM B-R buffer solution with different pH, prepare 1% keratin solution with different pH buffer, and dilute the enzyme solution with different pH buffer, then measure the enzyme activity under the above pH conditions, the one with the highest enzyme activity as 100%.
取适量酶液分别用不同pH的缓冲液稀释至适当浓度,于40℃静置1h,按照酶活测定方法测定残余酶活力,考察该酶的pH稳定性.以静置0h的酶活作为100%.Take an appropriate amount of enzyme solution and dilute it to an appropriate concentration with buffer solutions of different pH, and let it stand at 40°C for 1 hour. Measure the remaining enzyme activity according to the enzyme activity assay method to investigate the pH stability of the enzyme. The enzyme activity after standing for 0 hour is taken as 100 %.
B.重组角蛋白酶最适温度及温度稳定性的测定B. Determination of optimum temperature and temperature stability of recombinant keratinase
将适量稀释的酶液分别于30、40、50、60、70、80℃温度条件下测定角蛋白酶活力,确定该酶的最适作用温度.以酶活最高者作为100%.Measure the activity of keratinase with an appropriate amount of diluted enzyme solution at 30, 40, 50, 60, 70, and 80°C to determine the optimum action temperature of the enzyme. The highest enzyme activity is taken as 100%.
取适量稀释的酶液分别置于30、40、50、60、70、80℃6个不同温度中保温30min,然后测定该温度下残余酶活性.以保温0min的酶活作为100%.Take an appropriate amount of diluted enzyme solution and place it in six different temperatures of 30, 40, 50, 60, 70, and 80°C for 30 minutes, and then measure the residual enzyme activity at this temperature. The enzyme activity at 0 minutes of incubation is taken as 100%.
C.金属离子对重组角蛋白酶酶活的影响C. Effect of metal ions on the activity of recombinant keratinase
在酶活测定反应体系中分别添加不同金属离子(Fe2+、Fe3+、Co2+、Ca2+、Ni2+、Na+、Cu2+、K+、Mg2+、Al3+、Ba2+、Zn2+、Sn2+、Sr2+、Ag+、Pb2+、La3+、Li+、Mn2+),使其终浓度分别达到1mM,室温下放置30min,分别测定酶活力.未添加金属离子的反应管作为100%.将金属离子浓度加大到5mM,室温放置30min后,用相同方法测定酶活.未添加金属离子的反应管作为100%.Different metal ions (Fe2+, Fe3+, Co2+, Ca2+, Ni2+, Na+, Cu2+, K+, Mg2+, Al3+, Ba2+, Zn2+, Sn2+, Sr2+, Ag+, Pb2+, La3+, Li+, Mn2+ were added to the enzyme activity assay reaction system. ), so that the final concentration reached 1mM respectively, placed at room temperature for 30min, and measured the enzyme activity respectively. The reaction tube without adding metal ions was taken as 100%. live. The reaction tube without metal ions was taken as 100%.
D.蛋白酶抑制剂及表面活性剂对重组角蛋白酶酶活的影响D. Effects of protease inhibitors and surfactants on recombinant keratinase activity
在酶活测定反应体系中分别添加不同种类的蛋白酶抑制剂PMSF、EDTA、DTT、β-巯基乙醇以及不同种类的表面活性剂SDS、Tween 20、Tween 40、Tween 60、Tween 80、TritonX-100、Triton X-114、H2O2使其终浓度分别达到1mM和1%(H2O2达到15%),室温下放置30min,按照酶活测定方法分别测定酶活力.未添加化合物的反应管作为100%.Different kinds of protease inhibitors PMSF, EDTA, DTT, β-mercaptoethanol and different kinds of surfactants SDS, Tween 20, Tween 40, Tween 60, Tween 80, TritonX-100, Triton X-114, H 2 O 2 make the final concentration reach 1mM and 1% respectively (H2O2 reaches 15%), leave it at room temperature for 30min, and measure the enzyme activity according to the enzyme activity assay method. The reaction tube without compound is taken as 100% .
E.底物特异性对酶活的影响E. Effect of substrate specificity on enzyme activity
在酶活测定反应体系中分别以羊毛、羽毛、头发、1%可溶性角蛋白、1%酪蛋白、0.5%BSA、2%明胶、2%胶原蛋白为底物测定酶活,以1%可溶性角蛋白酶活作为100%.In the enzyme activity assay reaction system, wool, feather, hair, 1% soluble keratin, 1% casein, 0.5% BSA, 2% gelatin, and 2% collagen were used as substrates to measure enzyme activity, and 1% soluble keratin Protease activity as 100%.
(7)应用重组角蛋白酶进行羽毛降解(7) Application of recombinant keratinase for feather degradation
分别称取0.5g羽毛置于250mL锥形瓶中,并编号1、2、3、4、5、6,每个锥形瓶中分别放入下列溶液:Weigh 0.5g of feathers and place them in 250mL Erlenmeyer flasks, numbered 1, 2, 3, 4, 5, 6, and put the following solutions into each Erlenmeyer flask:
1号瓶:50mL去离子水;Bottle 1: 50mL deionized water;
2号瓶:50mL重组角蛋白酶发酵浓缩液(~200U/mL);Bottle No. 2: 50mL recombinant keratinase fermentation concentrate (~200U/mL);
3号瓶:1.43mg木瓜蛋白酶溶于50mL去离子水;Bottle No. 3: 1.43mg papain dissolved in 50mL deionized water;
4号瓶:4.2g胃蛋白酶溶于50mL去离子水;Bottle No. 4: 4.2g pepsin dissolved in 50mL deionized water;
5号瓶:24.2mg中性蛋白酶溶于50mL去离子水;Bottle No. 5: Dissolve 24.2mg of neutral protease in 50mL of deionized water;
6号瓶:2mg胰蛋白酶溶于50mL去离子水;Bottle No. 6: 2mg trypsin dissolved in 50mL deionized water;
将以上6个锥形瓶分别置于40℃,220rpm条件的摇床中消化分解羽毛20h,观察羽毛降解情况。The above 6 Erlenmeyer flasks were respectively placed in a shaker at 40°C and 220rpm to digest and decompose the feathers for 20 hours, and the degradation of the feathers was observed.
本发明的优点和有益效果:Advantages and beneficial effects of the present invention:
本发明提供了一种基于宏基因组技术挖掘的角蛋白酶及其基因编码序列与应用方法。它具有SEQ ID NO:1所示的核苷酸序列,全长1,152个核苷酸,编码384个氨基酸。以pET-28a(+)为表达质粒,E.coli BL21(DE3)为表达宿主,实现了该耐表面活性剂角蛋白酶基因的高效表达,重组菌株E.coli BL21(DE3)/pET-28a(+)-ker表现出角蛋白酶活性,能有效的降解可溶性角蛋白、酪蛋白、羊毛、羽毛等底物,在角蛋白废弃物的生物降解、饲料、洗涤剂、材料、透皮药物中应用等领域具有良好的应用价值。且该角蛋白酶对表面活性剂表现出较好的耐受性。该角蛋白酶的最适反应温度为55℃,最适反应pH为10.0,酶活稳定性较好,重组菌发酵周期短,适合于工业化大规模的生产。The invention provides a keratinase and its gene coding sequence and application method mined based on the metagenomic technology. It has the nucleotide sequence shown in SEQ ID NO:1, with a full length of 1,152 nucleotides, encoding 384 amino acids. Using pET-28a(+) as the expression plasmid and E.coli BL21(DE3) as the expression host, the high-efficiency expression of the surfactant-resistant keratinase gene was realized. The recombinant strain E.coli BL21(DE3)/pET-28a( +)-ker exhibits keratinase activity, can effectively degrade soluble keratin, casein, wool, feather and other substrates, and can be used in biodegradation of keratin waste, feed, detergent, materials, transdermal drugs, etc. The field has good application value. And the keratinase showed better tolerance to surfactants. The optimum reaction temperature of the keratinase is 55 DEG C, the optimum reaction pH is 10.0, the stability of the enzyme activity is good, the fermentation period of the recombinant bacteria is short, and it is suitable for large-scale industrial production.
附图说明Description of drawings
图1是PCR扩增角蛋白酶编码基因核酸电泳图谱。Fig. 1 is the electrophoresis pattern of PCR amplified keratinase coding gene nucleic acid.
M:5,000bp DNA Marker;泳道1:扩增得到的角蛋白酶基因。M: 5,000bp DNA Marker; lane 1: amplified keratinase gene.
图2是重组角蛋白酶分离纯化前后的SDS-PAGE图谱。Fig. 2 is the SDS-PAGE pattern before and after separation and purification of recombinant keratinase.
M:标准蛋白分子量;泳道a1为不含有目的基因的空质粒对照菌株无细胞抽提液;泳道a2为重组菌株的角蛋白酶无细胞抽提液;泳道b1为纯化后的角蛋白酶。M: standard protein molecular weight; lane a1 is the cell-free extract of an empty plasmid control strain that does not contain the target gene; lane a2 is the cell-free extract of keratinase from the recombinant strain; lane b1 is the purified keratinase.
图3为角蛋白酶的最适pH及pH稳定性。Figure 3 shows the optimum pH and pH stability of keratinase.
图4为角蛋白酶的最适温度及温度稳定性。Figure 4 shows the optimum temperature and temperature stability of keratinase.
图5为角蛋白酶的底物谱。Figure 5 is the substrate spectrum of keratinase.
1:2%胶原蛋白;2:2%明胶;3:2%酪蛋白;4:2%可溶性角蛋白;5:2%BSA;6:羊毛;7:羽毛;8:头发。1: 2% collagen; 2: 2% gelatin; 3: 2% casein; 4: 2% soluble keratin; 5: 2% BSA; 6: wool; 7: feather; 8: hair.
图6为角蛋白酶及其他普通蛋白酶降解羽毛情况。Figure 6 shows the degradation of feathers by keratinase and other common proteases.
A:去离子水;B:重组角蛋白酶发酵浓缩液;C:木瓜蛋白酶;D:胃蛋白酶;E:中性蛋白酶;F:胰蛋白酶。A: deionized water; B: recombinant keratinase fermentation concentrate; C: papain; D: pepsin; E: neutral protease; F: trypsin.
具体实施方式detailed description
下面结合实施例对本发明做进一步说明,但本发明并不受这些实施例的限制。The present invention will be further described below in conjunction with examples, but the present invention is not limited by these examples.
实施例1Example 1
本实施例说明基于宏基因组技术筛选角蛋白酶基因的方法。This example illustrates a method for screening keratinase genes based on metagenomic technology.
从皮革厂堆放皮毛的地方收集土样,提取样品总DNA,构建Fosmid文库,用牛奶平板进行初筛;以可溶性角蛋白为底物测定酶活,复筛阳性转化子,对表现出角蛋白酶活的转化子进行质粒提取并测序,获得角蛋白酶编码基因。Soil samples were collected from the place where furs were piled up in the tannery, the total DNA of the samples was extracted, the Fosmid library was constructed, and a milk plate was used for primary screening; soluble keratin was used as the substrate to determine the enzyme activity, and the positive transformants were re-screened, and those showing keratinase activity The transformants were extracted and sequenced to obtain the gene encoding keratinase.
实施例2Example 2
本实施例说明角蛋白酶编码基因的克隆方法。This example illustrates the cloning method of the gene encoding keratinase.
以土壤宏基因组为模板,根据测序得到的核苷酸序列设计引物(P1、P2),通过PCR扩增角蛋白酶的编码基因:Using the soil metagenome as a template, primers (P1, P2) were designed according to the nucleotide sequence obtained by sequencing, and the coding gene of keratinase was amplified by PCR:
引物P1:5’-CGCGGATCCTGAAAAAAGCTATATTGTTGG-3’(BamH Ⅰ)Primer P1: 5'-CGCGGATCCTGAAAAAAGCTATATTGTTGG-3'(BamH Ⅰ)
引物P2:5’-CCCAAGCTTCTCGAGTTAGTTAGAAGCTG-3’(HindⅢ)Primer P2: 5'-CCCAAGCTTCTCGAGTTAGTTAGAAGCTG-3'(HindⅢ)
PCR扩增反应在50μL体系中进行,反应体系中加入25μL Ex(Premix),20μLddH2O,2μL模板DNA,上下游引物个1.5μL。反应条件为在94℃预变性3min后开始循环:94℃变性30s,57℃退火30s,72℃延伸1min,共30个循环;72℃终延伸10min。PCR产物进行核酸电泳鉴定并割胶回收纯化,回收产物克隆至pMD19-T载体构建重组克隆质粒,将质粒转化至E.coliJM 109,挑取多个阳性转化子至LB液体培养基中(Ampr)37℃,220rpm培养10~12h,提取质粒后对质粒进行双酶切、PCR验证,验证正确的进行序列测定。核酸电泳结果显示角蛋白酶基因序列得到有效的扩增(图1)。The PCR amplification reaction was carried out in a 50 μL system, and 25 μL of Ex was added to the reaction system (Premix), 20 μL ddH2O, 2 μL template DNA, 1.5 μL upstream and downstream primers. The reaction conditions were 30 cycles of denaturation at 94°C for 3 minutes: denaturation at 94°C for 30 s, annealing at 57°C for 30 s, extension at 72°C for 1 min, and a total of 30 cycles; final extension at 72°C for 10 min. The PCR product was identified by nucleic acid electrophoresis, recovered and purified by tapping the gel, and the recovered product was cloned into the pMD19-T vector to construct a recombinant cloning plasmid, which was transformed into E.coliJM 109, and multiple positive transformants were picked and put into LB liquid medium (Amp r ) Cultivate at 37°C and 220rpm for 10-12 hours. After extracting the plasmid, perform double enzyme digestion and PCR verification to verify the correct sequence. Nucleic acid electrophoresis results showed that the keratinase gene sequence was effectively amplified (Figure 1).
实施例3Example 3
本实施例以pET-28a(+)为例说明重组表达质粒的构建过程。This example takes pET-28a(+) as an example to illustrate the construction process of the recombinant expression plasmid.
pET-28a(+)质粒带有T7启动子和6×His-tag标签,将pET-28a(+)质粒和验证正确的含有目的基因的重组克隆质粒同时用BamH Ⅰ和HindⅢ进行双酶切,37℃酶切3h后进行核酸电泳验证并割胶回收目的基因和目的质粒,回收产物用T4DNA连接酶在16℃过夜连接,连接产物转化至E.coli JM 109感受态细胞中,在含卡那霉素抗性(50mg/L)的LB培养过夜培养,挑取多个阳性转化子至含卡那霉素的LB液体培养基中在37℃,220rpm条件下培养10~12h后提取质粒并命名为pET-28a(+)-ker。The pET-28a(+) plasmid has a T7 promoter and a 6×His-tag tag. The pET-28a(+) plasmid and the verified recombinant cloned plasmid containing the target gene are simultaneously digested with BamH Ⅰ and Hind Ⅲ. After digestion at 37°C for 3 hours, carry out nucleic acid electrophoresis verification and tap gel to recover the target gene and target plasmid. The recovered product was ligated with T4 DNA ligase at 16°C overnight, and the ligated product was transformed into E.coli JM 109 competent cells. Cultivate the LB culture of resistance (50mg/L) overnight, pick multiple positive transformants into the LB liquid medium containing kanamycin, culture at 37°C, 220rpm for 10-12h, extract the plasmid and name it pET-28a(+)-ker.
实施例4Example 4
本实施例以大肠杆菌为例说明重组表达菌株的构建与筛选方法。This example uses Escherichia coli as an example to illustrate the construction and screening methods of recombinant expression strains.
将重组质粒pET-28a(+)-ker经42℃热击90s转化至宿主菌E.coli BL21(DE3)感受态细胞中,在含卡那霉素抗性(50mg/L)的LB培养过夜培养,通过PCR验证筛选阳性转化子E.coli BL21(DE3)/pET-28a(+)-ker,接种至含卡那霉素抗性(10mg/L)的LB培养基中过夜培养。次日按1%接种量转接于50mL新鲜LB液体培养基(含Kanr 50mg/L),于37℃培养约3h,待OD600nm约为0.6~0.8时,加入0.5mM的诱导剂IPTG 50μL,20℃诱导16h后,重组菌表现出角蛋白酶活性。The recombinant plasmid pET-28a(+)-ker was transformed into host strain E.coli BL21(DE3) competent cells by heat shock at 42°C for 90s, and cultured overnight in LB containing kanamycin resistance (50mg/L) Cultivate, and screen positive transformants E.coli BL21(DE3)/pET-28a(+)-ker by PCR verification, inoculate into LB medium containing kanamycin resistance (10mg/L) and culture overnight. The next day, transfer 1% of the inoculum to 50 mL of fresh LB liquid medium (containing Kan r 50 mg/L), culture at 37°C for about 3 hours, and when the OD600nm is about 0.6-0.8, add 0.5 mM inducer IPTG 50 μL, After induction at 20°C for 16 hours, the recombinant bacteria showed keratinase activity.
实施例5Example 5
本实施例说明角蛋白酶的分离纯化过程。This example illustrates the separation and purification process of keratinase.
将上述获得的重组菌发酵液在4℃,8,000rpm条件下离心20min,去掉上清收集菌体沉淀,菌体用10mL Tris-HCl(pH 9.0)缓冲液清洗一遍去除杂质,8,000rpm离心10min,再次去掉上清收集菌体沉淀,用5mL Tris-HCl(pH9.0)缓冲液悬浮,制备成菌悬液.将菌悬液在置于冰水浴中利用细胞超声破碎仪进行超声破碎,条件为:200W功率下工作200个循环,每个循环工作3s停7s。取破碎样品结晶紫染色,进行镜检,直到显示细胞破裂完全为止。细胞裂解破在4℃,8,000rpm条件下离心30min,所得上清即为粗酶液。将无细胞抽提液用0.22μm水膜过滤,制备上样样品,将Ni-NTA琼脂糖凝胶柱用Binding Buffer(20mM NaH2PO4,500mM NaCl,10mM咪唑,8M尿素)冲洗10个柱床体积,流速为5mL/min,直至平衡;将待纯化样品上样,流速为1.5mL/min;用Binding Buffer再冲洗10个柱床体积,流速为5mL/min;用0-100%的Elution Buffer(20mM NaH2PO4,500mM NaCl,500mM咪唑,8M尿素)进行线性洗脱,洗脱25个柱床体积,流速为5mL/min,洗脱过程实时监控UV280nm,收集洗脱峰样品,通过SDS-PAGE分析角蛋白酶纯化样品的分子量大小及纯度,结果显示角蛋白酶表观分子量大小约为27000道尔顿,达到电泳纯(图2)。Centrifuge the recombinant bacterial fermentation broth obtained above at 4°C and 8,000rpm for 20min, remove the supernatant to collect the cell pellet, wash the cell with 10mL Tris-HCl (pH 9.0) buffer to remove impurities, and centrifuge at 8,000rpm for 10min. Remove the supernatant again to collect the bacterial precipitate, suspend it with 5mL Tris-HCl (pH9.0) buffer solution, and prepare a bacterial suspension. Place the bacterial suspension in an ice-water bath and use a cell ultrasonic disruptor for ultrasonic disruption. The conditions are: : Work 200 cycles under 200W power, each cycle works for 3s and stops for 7s. The broken sample was stained with crystal violet and examined under the microscope until the cell rupture was complete. The lysed cells were centrifuged at 4°C and 8,000 rpm for 30 minutes, and the obtained supernatant was the crude enzyme solution. Filter the cell-free extract with a 0.22 μm water membrane to prepare the loading sample, wash the Ni-NTA agarose gel column with Binding Buffer (20mM NaH2PO4, 500mM NaCl, 10mM imidazole, 8M urea) for 10 column bed volumes, The flow rate is 5mL/min until equilibrium; load the sample to be purified, the flow rate is 1.5mL/min; wash 10 column bed volumes with Binding Buffer, the flow rate is 5mL/min; use 0-100% Elution Buffer (20mM NaH2PO4, 500mM NaCl, 500mM imidazole, 8M urea) for linear elution, elution of 25 column bed volumes, flow rate of 5mL/min, real-time monitoring of the elution process UV 280nm , collecting elution peak samples, and analyzing angles by SDS-PAGE The molecular weight and purity of the protease purification sample showed that the apparent molecular weight of keratinase was about 27,000 Daltons, reaching electrophoretic purity (Figure 2).
实施例6Example 6
本实施例说明角蛋白酶的催化特征。This example illustrates the catalytic characteristics of keratinases.
(1)分别用pH 5~11的B-R缓冲液将酶液和底物稀释适当倍数测定酶活,该酶的最适反应pH值为10,在pH 6~12范围内能达到最高酶活的70%~100%。于40℃静置1h后测定残余酶活力,该重组角蛋白酶在pH 7~12的条件下比较稳定,可以保持80%左右的相对酶活(图3)。(1) Dilute the enzyme solution and substrate with B-R buffer solution of pH 5-11 to determine the enzyme activity. The optimal reaction pH value of the enzyme is 10, and the highest enzyme activity can be achieved in the range of pH 6-12 70% to 100%. After standing at 40° C. for 1 hour, the remaining enzyme activity was measured, and the recombinant keratinase was relatively stable under the condition of pH 7-12, and could maintain about 80% of the relative enzyme activity ( FIG. 3 ).
(2)将适当稀释的酶液分别置于30、40、50、60、70、80℃温度条件下测定角蛋白酶活力,该酶的最适反应温度为55℃。取适当稀释的酶液分别置于以上温度的水浴锅中保温30min,然后测定各个温度下的残余酶活性。该酶在40~60℃条件下酶活相对稳定,可以维持80%的相对酶活(图4)。(2) Put the appropriately diluted enzyme solution under the temperature conditions of 30, 40, 50, 60, 70, and 80°C to measure the activity of keratinase, and the optimum reaction temperature of the enzyme is 55°C. Take appropriately diluted enzyme solutions and place them in water baths at the above temperatures for 30 minutes, then measure the residual enzyme activity at each temperature. The enzyme activity is relatively stable under the condition of 40-60° C., and can maintain 80% of the relative enzyme activity ( FIG. 4 ).
(3)在酶活测定的反应体系中分别添加不同的金属离子使终浓度达到1mM,放置30min后,分别测定酶活力,结果如表1所示,与未添加任何金属离子的空白对照组相比,有7种金属离子(Ca2+、Mn2+、Ag+、Na+、Mg2+、Li+、Sn2+)对酶活具有促进作用,其中Ca2+离子对重组角蛋白酶的促进作用最明显,相对酶活达到266.4%;而Cu2+、Pb2+离子则明显抑制了酶活。(3) Add different metal ions to the reaction system of enzyme activity measurement to make the final concentration reach 1mM, after standing for 30min, measure the enzyme activity respectively, the results are shown in Table 1, compared with the blank control group without adding any metal ions Compared with that, there are 7 kinds of metal ions (Ca 2+ , Mn 2+ , Ag + , Na + , Mg 2+ , Li + , Sn 2+ ) that can promote the enzyme activity, among which Ca 2+ ions have a positive effect on the activity of recombinant keratinase The promoting effect was the most obvious, and the relative enzyme activity reached 266.4%. Cu 2+ and Pb 2+ ions obviously inhibited the enzyme activity.
表1金属离子对酶活的影响Table 1 Effect of metal ions on enzyme activity
(4)在酶活测定反应体系中分别添加不同的蛋白酶抑制剂和表面活性剂,室温放置30min后分别测定酶活力.结果如表2所示,PMSF对该酶表现出完全抑制作用,说明该重组角蛋白酶属于丝氨酸蛋白酶类;表面活性剂如吐温和曲拉通对重组角蛋白酶表现出促进作用,该酶在表面活性剂中表现出的良好稳定性,使其在洗涤剂领域有良好的应用前景。(4) Different protease inhibitors and surfactants were added to the enzyme activity measurement reaction system, and the enzyme activities were measured after standing at room temperature for 30 minutes. The results are shown in Table 2. PMSF showed complete inhibition of the enzyme, indicating that the Recombinant keratinase belongs to the class of serine proteases; surfactants such as Tween and Triton can promote recombinant keratinase, and the good stability of the enzyme in surfactants makes it a good application in the field of detergents prospect.
表2蛋白酶抑制剂和表面活性剂对酶活的影响The impact of table 2 protease inhibitors and surfactants on enzyme activity
(5)分别以2%胶原蛋白、2%明胶、2%酪蛋白、2%可溶性角蛋白、2%BSA、羊毛、羽毛、头发作为底物测定酶活。与可溶性角蛋白相比,酪蛋白作为底物时表现出最高酶活,约为205U/mL,而胶原蛋白为底物时酶活较低,仅为27U/mL(图5)。因此可以看出该重组角蛋白酶有着广泛的底物谱,对不可溶性底物和可溶性底物均能利用,且胶原蛋白酶活较低,有利于其在医药行业的应用。(5) 2% collagen, 2% gelatin, 2% casein, 2% soluble keratin, 2% BSA, wool, feather, and hair were used as substrates to measure enzyme activity. Compared with soluble keratin, casein showed the highest enzyme activity at about 205 U/mL when it was used as a substrate, while the enzyme activity was lower at 27 U/mL when collagen was used as a substrate (Fig. 5). Therefore, it can be seen that the recombinant keratinase has a broad substrate spectrum, can utilize both insoluble substrates and soluble substrates, and has low collagenase activity, which is beneficial to its application in the pharmaceutical industry.
实施例7Example 7
本实施例说明应用重组角蛋白酶进行羽毛降解试验。This example illustrates the application of recombinant keratinase to a feather degradation test.
分别称取0.5g羽毛置于250mL锥形瓶中,每个锥形瓶中依次加入50mL的去离子水,重组角蛋白酶发酵液,木瓜蛋白酶溶液,胃蛋白酶溶液,中性蛋白酶溶液,胰蛋白酶溶液,然后将以上6个锥形瓶置于40℃,220rpm条件的摇床中消化分解羽毛20h.结果如图6所示,重组角蛋白酶发酵液里的羽毛基本被降解完全,只剩少量羽轴,而去离子水以及其他蛋白酶类均未对羽毛起到降解作用,说明该酶在饲料行业具有良好的应用前景。同时也可应用于用于角蛋白类材料的生物制备中,或应用于洗涤行业、用于去除蛋白以及角蛋白类污渍,以及透皮药物中应用、主要用于水解去除表皮角蛋白以促进药物渗透吸收。Weigh 0.5g of feathers and place them in 250mL conical flasks, add 50mL of deionized water, recombinant keratinase fermentation broth, papain solution, pepsin solution, neutral protease solution, and trypsin solution in each conical flask , and then put the above 6 Erlenmeyer flasks in a shaker at 40°C and 220rpm to digest and decompose the feathers for 20 hours. As shown in Figure 6, the feathers in the recombinant keratinase fermentation broth were basically completely degraded, leaving only a small amount of rachis , while deionized water and other proteases did not degrade feathers, indicating that this enzyme has a good application prospect in the feed industry. At the same time, it can also be used in the biological preparation of keratin materials, or in the washing industry, to remove protein and keratin stains, and in transdermal drugs, mainly used to hydrolyze and remove epidermal keratin to promote drugs Osmotic absorption.
本发明不限于这些公开的实施例,本发明将覆盖技术方案所描述的范围,以及权利要求范围的各种变形和等效变化,在不偏离本发明的技术解决方案的前提下,对本发明所作的本领域技术人员容易实现的任何修改或改进均属于本发明所要求保护的范围。The present invention is not limited to these disclosed embodiments, and the present invention will cover the scope described in the technical solution, as well as various modifications and equivalent changes in the scope of the claims, without departing from the technical solution of the present invention, the present invention is made Any modifications or improvements that can be easily realized by those skilled in the art belong to the scope of protection claimed by the present invention.
SEQ ID NO: 1SEQ ID NO: 1
SEQ : 1152 bp;SEQ: 1152 bp;
Composition :339 A; 271 C; 252 G; 290 T; 0 OTHERComposition: 339 A; 271 C; 252 G; 290 T; 0 OTHER
Percentage: 29.4% A; 23.5% C; 21.9% G; 25.2% T; 0.0%OTHERPercentage: 29.4% A; 23.5% C; 21.9% G; 25.2% T;
Molecular Weight (kDa): ssDNA: 355.49 dsDNA: 710.16Molecular Weight (kDa): ssDNA: 355.49 dsDNA: 710.16
ORIGINORIGIN
1 ATGTGCGTGA AAAAGAAAAA TGTGATGACA AGTGTTTTAT TGGCTGTCCC TCTTCTGTTT1 ATGTGCGTGA AAAAGAAAAA TGTGATGACA AGTGTTTTAT TGGCTGTCCC TCTTCTGTTT
61 TCAGCAGGGT TTGGAGGCTC CATGGCAAAT GCCGAGACGG TCTCCAAAAC AGATAGTGAA61 TCAGCAGGGT TTGGAGGCTC CATGGCAAAT GCCGAGACGG TCTCCAAAAC AGATAGTGAA
121 AAAAGCTATA TTGTTGGTTT TAAAGCCTCT GCCACCACAA ACAGCTCTAA AAAACAAGCT121 AAAAGCTATA TTGTTGGTTTTAAAGCCTCTGCCACCACAAACAGCTCTAAAAAACAAGCT
181 GTCATTCAAA ATGGTGGAAA ACTAGAAAAA CAATACCGCC TCATTAATGC TGCACAAGTG181 GTCATTCAAA ATGGTGGAAA ACTAGAAAAA CAATACCGCC TCATTAATGC TGCACAAGTG
241 AAAATGTCCG AACAAGCCGC CAAAAAACTT GAACATGACC CTAGCATTGC TTACGTAGAA241 AAAATGTCCG AACAAGCCGC CAAAAAACTT GAACATGACC CTAGCATTGC TTACGTAGAA
301 GAAGACCATA AAGCAGAAGC ATATGCACAA ACCGTCCCTT ATGGAATCCC TCAAATCAAA301 GAAGACCATA AAGCAGAAGC ATATGCACAA ACCGTCCCTT ATGGAATCCC TCAAATCAAA
361 GCTCCAGCTG TACACGCTCA AGGTTATAAA GGTGCTAATG TCAAAGTAGC TGTCCTTGAT361 GCTCCAGCTG TACACGCTCA AGGTTATAAA GGTGCTAATG TCAAAGTAGC TGTCCTTGAT
421 ACTGGAATCC ACGCTGCACA CCCTGATTTA AATGTTGCAG GCGGTGCGAG CTTCGTCCCT421 ACTGGAATCC ACGCTGCACA CCCTGATTTA AATGTTGCAG GCGGTGCGAG CTTCGTCCCT
481 TCAGAGCCAA ATGCCACCCA AGACTTTCAA TCACATGGAA CTCACGTAGC TGGAACCATT481 TCAGAGCCAA ATGCCACCCA AGACTTTTCAA TCACATGGAA CTCACGTAGC TGGAACCATT
541 GCTGCCCTTG ATAACACAAT TGGTGTACTC GGGGTCGCTC CAAGCGCTTC CCTATATGCT541 GCTGCCCTTG ATAACACAAT TGGTGTACTC GGGGTCGCTC CAAGCGCTTC CCTATATGCT
601 GTAAAAGTAT TAGACCGCTA TGGCGACGGA CAATACAGCT GGATTATTAG CGGTATTGAA601 GTAAAGTAT TAGACCGCTA TGGCGACGGA CAATACAGCT GGATTATTAG CGGTATTGAA
661 TGGGCTGTAG CCAATAATAT GGATGTCATC AATATGAGCT TAGGCGGACC AAGCGGTTCA661 TGGGCTGTAG CCAATAATAT GGATGTCATC AATATGAGCT TAGGCGGACC AAGCGGTTCA
721 ACTGCGCTTA AAAATGCCGT CGATACAGCG AATAACCGTG GAGTCGTTGT TGTGGCAGCC721 ACTGCGCTTA AAAATGCCGT CGATACAGCG AATAACCGTG GAGTCGTTGT TGTGGCAGCC
781 GCAGGTAATT CTGGCTCTAG CGGCTCTAGC AGTACAGTTG GCTATCCAGC AAAATACGAT781 GCAGGTAATT CTGGCTCTAG CGGCTCTAGC AGTACAGTTG GCTATCCAGC AAAATACGAT
841 TCTACAATTG CTGTTGCCAA TGTAAACAGT AACAATGTCA GAAACTCATC TTCTAGCGCA841 TCTACAATTG CTGTTGCCAA TGTAAACAGT AACAATGTCA GAAACTCATC TTCTAGCGCA
901 GGTCCTGAAT TAGATGTTTC TGCACCTGGT ACTTCTATTT TAAGTACAGT GCCAAGCAGT901 GGTCCTGAAT TAGATGTTTC TGCACCTGGT ACTTCTATTT TAAGTACAGT GCCAAAGCAGT
961 GGATACACTT CTTTGAACGG AACGTCAATG GCTTCTCCTC ATGTAGCGGG AGCAGCAGCT961 GGATACACTT CTTTGAACGG AACGTCAATG GCTTCTCCTC ATGTAGCGGG AGCAGCAGCT
1021 TTGATCTTGT CAAAACATCC GAACCTTTCA GCTTCACAAG TCCGCAACCG TCTCTCCAGC1021 TTGATCTTGT CAAAACATCC GAACCTTTCA GCTTCACAAG TCCGCAACCG TCTCTCCAGC
1081 ACGGCGACTT ATTTGGGAAG CTCCTTCTAC TATGGGAAAG GTCTGATCAA TGTCGAAGCT1081 ACGGCGACTT ATTTGGGAAG CTCCTTCTAC TATGGGAAAG GTCTGATCAA TGTCGAAGCT
1141 GCCGCTCAAT AA1141 GCCGCTCAAT AA
SEQ ID NO: 2SEQ ID NO: 2
Universal codeUniversal code
Total amino acid number: 384, MW=39420Total amino acid number: 384, MW=39420
The protein of mature keratinae starts at ‘AQPVT’ for 267 amino acids, MW=26750The protein of mature keratinae starts at ‘AQPVT’ for 267 amino acids, MW=26750
1 MCVKKKNVMT SVLLAVPLLF1 MCVKKKNVMT SVLLAVPLLF
21 SAGFGGSMAN AETVSKTDSE21 SAGFGGSMAN AETVSKTDSE
41 KSYIVGFKAS ATTNSSKKQA41 KSYIVGFKAS ATTNSSKKQA
61 VIQNGGKLEK QYRLINAAQV61 VIQNGGKLEK QYRLINAAQV
81 KMSEQAAKKL EHDPSIAYVE81 KMSEQAAKKL EHDPSIAYVE
101 EDHKAEAYAQ TVPYGIPQIK101 EDHKAEAYAQ TVPYGIPQIK
121 APAVHAQGYK GANVKVAVLD121 APAVHAQGYK GANVKVAVLD
141 TGIHAAHPDL NVAGGASFVP141 TGIHAAHPDL NVAGGASFVP
161 SEPNATQDFQ SHGTHVAGTI161 SEPNATQDFQ SHGTHVAGTI
181 AALDNTIGVL GVAPSASLYA181 AALDNTIGVL GVAPSASLYA
201 VKVLDRYGDG QYSWIISGIE201 VKVLDRYGDG QYSWIISGIE
221 WAVANNMDVI NMSLGGPSGS221 WAVANNMDVI NMSLGGPSGS
241 TALKNAVDTA NNRGVVVVAA241 TALKNAVDTA NNRGVVVVAA
261 AGNSGSSGSS STVGYPAKYD261 AGNSGSSGSS STVGYPAKYD
281 STIAVANVNS NNVRNSSSSA281 STIAVANVNS NNVRNSSSSA
301 GPELDVSAPG TSILSTVPSS301 GPELDVSAPG TSILSTVPSS
321 GYTSLNGTSM ASPHVAGAAA321 GYTSLNGTSM ASPHVAGAAA
341 LILSKHPNLS ASQVRNRLSS341 LILSKHPNLS ASQVRNRLSS
361 TATYLGSSFY YGKGLINVEA361 TATYLGSSFY YGKGLINVEA
381 AAQ381 AAQ
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