CN105802854B - Cellulase high-yield strain and application thereof - Google Patents

Cellulase high-yield strain and application thereof Download PDF

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CN105802854B
CN105802854B CN201410853297.6A CN201410853297A CN105802854B CN 105802854 B CN105802854 B CN 105802854B CN 201410853297 A CN201410853297 A CN 201410853297A CN 105802854 B CN105802854 B CN 105802854B
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trichoderma reesei
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周志华
邹根
刘睿
陈玲
江艳萍
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Center for Excellence in Molecular Plant Sciences of CAS
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Abstract

本发明涉及一种纤维素酶高产菌株及其应用。首次揭示一株高产纤维素酶的里氏木霉菌株PPL3‑1,其生产的纤维素酶在酶活和产量均具有显著性的优势。本发明人还通过进一步优化提高了该菌株的纤维素酶产量。The present invention relates to a cellulase high-yielding strain and its application. It is the first time to reveal a Trichoderma reesei strain PPL3-1 with high cellulase production. The cellulase produced by it has significant advantages in both enzyme activity and yield. The inventors also improved the cellulase production of this strain by further optimization.

Description

一种纤维素酶高产菌株及其应用A kind of cellulase high-yielding strain and its application

技术领域technical field

本发明涉及微生物学领域,更具体地,本发明涉及一种纤维素酶高产菌株及其应用。The present invention relates to the field of microbiology, more particularly, the present invention relates to a cellulase high-producing strain and its application.

背景技术Background technique

纤维素是多个葡萄糖残基以β-1,4-糖苷键连接而成的多聚物,是地球上最丰富的可再生的生物质资源。以木质纤维素为原料、用纤维素酶水解纤维素生成葡萄糖,进而发酵为燃料乙醇成为应对当今世界能源危机、环境污染等问题的重要出路。Cellulose is a polymer composed of multiple glucose residues linked by β-1,4-glycosidic bonds, and is the most abundant renewable biomass resource on earth. Using lignocellulose as raw material, hydrolyzing cellulose with cellulase to generate glucose, and then fermenting it into fuel ethanol has become an important way to deal with the problems of energy crisis and environmental pollution in today's world.

纤维素酶是指能够将纤维素转化成葡萄糖的一系列酶的总称,主要包括内切葡聚糖酶(endo-β-1,4-glucanase,EC 3.2.1.4)、外切葡聚糖酶(exoglucanase,EC 3.2.1.91)和β-葡萄糖苷酶(β-glucosidase,EC 3.2.1.21)。内切葡聚糖酶作用于纤维素长链分子的内部将长纤维切成短纤维,外切葡聚糖酶作用于纤维素分子的一端,以两个葡萄糖残基为单位进行切割生成纤维二糖,β-葡萄糖苷酶切割纤维二糖及一些纤维寡糖最终生成单个的葡萄糖分子。作为纤维素复合酶系的重要组成之一,β-葡萄糖苷酶的关键作用主要体现在两个方面:一方面,由于纤维二糖积累对其上游内切葡聚糖酶和外切葡聚糖酶的活性具有显著的反馈抑制作用,因此,β-葡萄糖苷酶对纤维二糖的高效水解能力对纤维素的彻底降解起到至关重要的作用。另一方面,除水解活性,β-葡萄糖苷酶还具有转糖苷活性,在一定的条件下可以通过转糖苷作用将两个葡萄糖分子合成一个槐糖分子,而已经发现槐糖是纤维素酶基因表达的强诱导物。一般认为丝状真菌中纤维素酶合成的诱导机制是:存在于分生孢子和菌丝表面的少量组成型纤维素酶首先降解纤维素生成纤维二糖等寡糖,然后在质膜结合的葡萄糖苷酶的转糖苷作用下,生成槐糖等诱导物,经细胞膜上的组成型透性酶系统进人细胞内,启动纤维素酶的合成。由此可见,提高β-葡萄糖苷酶在纤维素降解体系的催化活性,对于提高纤维素降解体系转化效率及降低纤维素乙醇产业生产成本,具有巨大的商业价值和现实意义。Cellulase is a general term for a series of enzymes that can convert cellulose into glucose, mainly including endo-β-1,4-glucanase (EC 3.2.1.4), exo-glucanase (exoglucanase, EC 3.2.1.91) and beta-glucosidase (beta-glucosidase, EC 3.2.1.21). The endoglucanase acts on the inside of the long-chain cellulose molecule to cut the long fibers into short fibers, and the exoglucanase acts on one end of the cellulose molecule to cut two glucose residues to form fiber two. The sugar, β-glucosidase, cleaves cellobiose and some cellooligosaccharides eventually to individual glucose molecules. As one of the important components of the cellulose complex enzyme system, the key role of β-glucosidase is mainly reflected in two aspects: on the one hand, due to the accumulation of cellobiose, its upstream endoglucanase and exoglucan The activity of the enzyme has a significant feedback inhibition effect. Therefore, the efficient hydrolysis of cellobiose by β-glucosidase plays a crucial role in the complete degradation of cellulose. On the other hand, in addition to hydrolysis activity, β-glucosidase also has transglycosidase activity. Under certain conditions, two glucose molecules can be synthesized into one sophorose molecule through transglycosidation. It has been found that sophorose is a cellulase gene Strong inducer of expression. It is generally believed that the induction mechanism of cellulase synthesis in filamentous fungi is that a small amount of constitutive cellulase existing on the surface of conidia and hyphae first degrades cellulose to generate oligosaccharides such as cellobiose, and then binds glucose in the plasma membrane. Under the action of transglycosidase, inducers such as sophorose are generated, and enter into human cells through the constitutive permease system on the cell membrane to initiate the synthesis of cellulase. It can be seen that improving the catalytic activity of β-glucosidase in the cellulose degradation system has great commercial value and practical significance for improving the conversion efficiency of the cellulose degradation system and reducing the production cost of the cellulosic ethanol industry.

纤维素酶种类繁多,许多微生物特别是真菌具有产生这种复合酶的能力,其中产酶能力较强的有木霉、曲霉、根霉和青霉等,尤以木霉属菌种居多。而里氏木霉(Trichoderma reesei)则是纤维素酶工业中利用最多的菌株。里氏木霉菌株Qm6a为各个高产纤维素酶菌株的出发株,为了获取高产纤维素酶的新菌株,Qm6a经过两轮直线加速器的诱变和筛选得到了更高效的产纤维素酶突变菌株Qm9414,但是仍然受到碳代谢阻遏,产酶状况会随着发酵时间增加,葡萄糖浓度升高,纤维素酶的合成逐渐受到抑制。为了获得更高的纤维素酶产量,对Qm6a重新进行育种,通过三轮诱变和筛选得到了抗碳代谢阻遏的高产菌株Rut-C30:第一轮通过紫外诱变和抗代谢阻遏筛选获得了菌株M7;第二轮对M7通过N-硝基胍诱变得到突变株NG14,相比Qm9414,NG14胞外蛋白产量和滤纸酶活分别提高了1倍和4倍;第三轮在NG14的基础上经过紫外诱变和抗代谢阻遏筛选的得到了更高效的产纤维素酶菌株Rut-C30。此外,在NG14的基础上紫外诱变获取了另一突变株RL-P37,另一工业上广泛应用的纤维素酶高产菌株CL-847是由Qm9414诱变而来。由于其高产纤维素酶的能力,在工业上被广泛用于纺织、造纸、制浆及生物能源等领域。该菌目前最高发酵水平可达100g/L的蛋白产量,具有很强的蛋白分泌能力,同时对人畜安全,已经被开发成表达同源蛋白和异源蛋白的良好真菌宿主。在纤维素酶工业应用中,里氏木霉的产酶和蛋白分泌能力的进一步提高有助于纤维素酶应用市场的进一步打开。但是,里氏木霉的高产菌株被欧美大公司所垄断,限制了我国纤维素酶工业的发展。因此,有必要对里氏木霉进行更加深入的改造,提高其产酶能力和蛋白分泌能力,降低纤维素酶的工业生产成本,进而开发有自主产权的工业菌株。There are many kinds of cellulase, and many microorganisms, especially fungi, have the ability to produce this compound enzyme. Among them, Trichoderma, Aspergillus, Rhizopus and Penicillium have strong enzyme-producing ability, especially Trichoderma species. Trichoderma reesei is the most used strain in the cellulase industry. Trichoderma reesei strain Qm6a is the starting strain of each high cellulase-producing strain. In order to obtain a new strain with high cellulase production, Qm6a was subjected to two rounds of linear accelerator mutagenesis and screening to obtain a more efficient cellulase-producing mutant strain Qm9414 However, it is still repressed by carbon metabolism, and the enzyme production status will increase with the fermentation time, the glucose concentration will increase, and the synthesis of cellulase will be gradually inhibited. In order to obtain higher cellulase production, Qm6a was re-bred, and the high-yielding strain Rut-C30 resistant to carbon metabolism repression was obtained through three rounds of mutagenesis and screening: the first round of UV mutagenesis and anti-metabolic repression screening obtained Strain M7; In the second round, M7 was mutated to mutant NG14 by N-nitroguanidine. Compared with Qm9414, the extracellular protein production and filter paper enzyme activity of NG14 were increased by 1 and 4 times, respectively; the third round was based on NG14. A more efficient cellulase-producing strain Rut-C30 was obtained after UV mutagenesis and anti-metabolic repression screening. In addition, another mutant strain RL-P37 was obtained by ultraviolet mutagenesis on the basis of NG14, and another high-producing strain of cellulase CL-847, which is widely used in industry, was mutagenized from Qm9414. Due to its high-yield cellulase capacity, it is widely used in textile, papermaking, pulping and bioenergy industries. At present, the highest fermentation level of the bacteria can reach a protein yield of 100g/L. It has a strong protein secretion ability and is safe for humans and animals. It has been developed as a good fungal host for expressing homologous and heterologous proteins. In the industrial application of cellulase, the further improvement of the ability of Trichoderma reesei to produce enzymes and protein secretion will help to further open the application market of cellulase. However, the high-yielding strains of Trichoderma reesei are monopolized by large European and American companies, which limits the development of my country's cellulase industry. Therefore, it is necessary to carry out more in-depth transformation of Trichoderma reesei to improve its enzyme production capacity and protein secretion capacity, reduce the industrial production cost of cellulase, and then develop industrial strains with independent property rights.

由于里氏木霉的酶系组成中纤维素外切酶和内切酶占了99%,而β-葡萄糖苷酶和其他纤维素酶和半纤维素酶则不到1%;同时真菌酶系大多数是偏酸性,而耐热性也不佳,这些都成为了里氏木霉纤维素酶的瓶颈。虽然传统的诱变育种可以获得不少优良的工业菌株,但Kubicek等认为,从1978年到1991年单纯通过传统诱变方法获得里氏木霉的突变株,在产酶能力上已经没有大的改观。近年来,随着分子生物学的进一步发展,人们已经逐渐从常规的诱变育种和改善发酵条件等传统生物学转向利用比较基因组学、蛋白质组学、转录组学和代谢组学等系统生物学,以此来分析了解一些高产菌株重要突变基因的功能和相关分子机制,并利用这些机制进行进一步遗传改造以获取更符合工业需求的生产菌株。尤其是2008年,里氏木霉Qm6a和Rut-C30的基因组测序完成并相继公开,Rut-C30高产的分子机制已经用比较基因组的方法得到解析,如一系列转录因子、基础代谢相关酶和转运蛋白等基因的缺失。这些研究成果已经被不少研究者应用到工业菌种的改造中:特别是Rut-C30中最关键的cre1突变的发现,解释了突变株的解阻遏现象。因此通过在野生型菌株敲除阻遏因子cre1或引入cre1突变,可显著地提高重组菌株在葡萄糖及诱导条件下纤维素酶的表达;而Ace1是另一个产纤维素酶的抑制因子,在ace1敲除菌株中,在纤维素或槐糖诱导条件下主要的纤维素酶基因的表达都得到了上调。Because the composition of Trichoderma reesei enzymes accounts for 99% of cellulase exonuclease and endonuclease, while β-glucosidase and other cellulases and hemicellulases account for less than 1%; meanwhile, fungal enzyme system Most of them are acidic and have poor heat resistance, which have become the bottleneck of Trichoderma reesei cellulase. Although traditional mutagenesis breeding can obtain many excellent industrial strains, Kubicek et al. believed that from 1978 to 1991, the mutant strains of Trichoderma reesei obtained only by traditional mutagenesis methods had no significant enzyme production capacity. change. In recent years, with the further development of molecular biology, people have gradually shifted from traditional biology such as conventional mutation breeding and improving fermentation conditions to systems biology using comparative genomics, proteomics, transcriptomics and metabolomics. , in order to analyze and understand the functions and related molecular mechanisms of important mutant genes of some high-yielding strains, and use these mechanisms to carry out further genetic modification to obtain production strains that are more in line with industrial needs. Especially in 2008, the genome sequencing of Trichoderma reesei Qm6a and Rut-C30 was completed and published one after another, and the molecular mechanism of Rut-C30 high production has been analyzed by comparative genomics methods, such as a series of transcription factors, basal metabolism-related enzymes and transporters. Isogenic deletion. These research results have been applied to the transformation of industrial strains by many researchers: especially the discovery of the most critical cre1 mutation in Rut-C30, which explains the derepression phenomenon of mutant strains. Therefore, by knocking out the repressor cre1 in the wild-type strain or introducing a cre1 mutation, the expression of cellulase in the recombinant strain under glucose and induction conditions can be significantly improved; while Ace1 is another inhibitor of cellulase production, and in ace1 knockout In all but the strains, the expression of major cellulase genes was up-regulated under cellulose- or sophorose-inducing conditions.

综上,本领域有必要进一步研究纤维素酶生产菌株,开发性能优良的菌株。To sum up, it is necessary in this field to further study cellulase producing strains and develop strains with excellent performance.

发明内容SUMMARY OF THE INVENTION

本发明的目的在于提供一种纤维素酶高产菌株及其应用。The purpose of the present invention is to provide a cellulase high-yielding strain and its application.

在本发明的第一方面,提供一种分离的里氏木霉菌株或其孢子、菌丝体、原生质体,所述的菌株在中国典型培养物保藏中心的保藏号为CCTCC NO:M 2014561。In a first aspect of the present invention, an isolated Trichoderma reesei strain or its spores, mycelium, and protoplasts is provided, and the preservation number of the strain in the China Center for Type Culture Collection is CCTCC NO: M 2014561.

在一个优选例中,所述的保藏号为CCTCC NO:M 2014561的里氏木霉菌株或其孢子生产的纤维素酶的酶活高于15IU/mL;较佳地高于20IU/mL。In a preferred example, the enzymatic activity of the cellulase produced by the Trichoderma reesei strain with the deposit number CCTCC NO:M 2014561 or its spores is higher than 15IU/mL; preferably higher than 20IU/mL.

在另一优选例中,保藏号为CCTCC NO:M 2014561的菌株或其孢子、菌丝体、原生质体中,转化有潮霉素(hygromycin)抗性基因hph。In another preferred example, the strain whose deposit number is CCTCC NO:M 2014561 or its spores, mycelium, and protoplasts is transformed with a hygromycin (hygromycin) resistance gene hph.

在本发明的另一方面,提供一种里氏木霉菌株或其孢子、菌丝体、原生质体,所述菌株是前面所述的里氏木霉菌株的培养后代,且其ura5基因发生缺失突变。较佳地,该后代菌株产生的纤维素酶的酶活高于25IU/mL。In another aspect of the present invention, there is provided a Trichoderma reesei strain or its spores, mycelium, protoplasts, the strain is the cultured offspring of the aforementioned Trichoderma reesei strain, and its ura5 gene is deleted mutation. Preferably, the enzymatic activity of the cellulase produced by the progeny strain is higher than 25 IU/mL.

在本发明的另一方面,提供一种基因工程改造的里氏木霉菌株或其孢子、菌丝体、原生质体,所述的菌株是在所述的里氏木霉菌株中转化外源的ura5(较佳地,其来源于草酸青霉)和纤维素酶激活因子Xyr1后获得的菌株。In another aspect of the present invention, there is provided a genetically engineered Trichoderma reesei strain or its spores, mycelium, and protoplasts, wherein the strain is transformed from an exogenous strain in the Trichoderma reesei strain A strain obtained after ura5 (preferably, which is derived from Penicillium oxalicum) and cellulase activator Xyr1.

在另一优选例中,所述的ura5的核苷酸序列如SEQ ID NO:5或6所示。In another preferred embodiment, the nucleotide sequence of the ura5 is shown in SEQ ID NO: 5 or 6.

在另一优选例中,所述的纤维素酶激活因子Xyr1的核苷酸序列如SEQ ID NO:7所示。In another preferred embodiment, the nucleotide sequence of the cellulase activator Xyr1 is shown in SEQ ID NO:7.

在本发明的另一方面,提供一种里氏木霉菌株或其孢子、菌丝体、原生质体,所述菌株是过表达(或转化有)纤维素酶激活因子Xyr1的所述的里氏木霉菌株或其孢子、菌丝体、原生质体。例如,所述的维素酶激活因子Xyr1是菌株内源过表达,或是外源转化入维素酶激活因子Xyr1编码序列后使得所述菌株后过表达。In another aspect of the present invention, there is provided a Trichoderma reesei strain or its spores, mycelium, and protoplasts, wherein the strain is the described reesei that overexpresses (or is transformed with) cellulase activator Xyr1 Trichoderma strains or their spores, mycelium, protoplasts. For example, the vitrease activator Xyr1 is endogenously overexpressed in the strain, or the strain is overexpressed after exogenous transformation into the vitrease activator Xyr1 coding sequence.

在本发明的另一方面,提供前面任一所述的里氏木霉菌株或其孢子、菌丝体、原生质体的用途,用于生产纤维素酶(较佳地,通过利用工农业废弃物生产纤维素酶);或用于水解β-1,4-糖苷键(获得还原糖)。In another aspect of the present invention, there is provided the use of any of the aforementioned Trichoderma reesei strains or their spores, mycelium, and protoplasts for the production of cellulase (preferably, by utilizing industrial and agricultural wastes) production of cellulase); or for the hydrolysis of β-1,4-glycosidic bonds (to obtain reducing sugars).

在一个优选例中,所述的纤维素酶用于水解木质纤维素;较佳地,所述木质纤维素包括(但不限于):玉米秸杆、玉米芯、稻草、稻壳、麦秸杆、高粱杆、木糖渣、甘蔗渣或其组合。In a preferred example, the cellulase is used to hydrolyze lignocellulose; preferably, the lignocellulose includes (but is not limited to): corn stover, corncob, straw, rice husk, wheat straw , sorghum stalk, xylose bagasse, bagasse, or a combination thereof.

在本发明的另一方面,提供一种生产纤维素酶的方法,所述方法包括:培养前面任一所述的里氏木霉菌株或其孢子、菌丝体、原生质体,使其生产纤维素酶。In another aspect of the present invention, a method for producing cellulase is provided, the method comprising: culturing any of the aforementioned Trichoderma reesei strains or their spores, mycelia, and protoplasts to produce fibers Vegetase.

在一个优选例中,所述的培养方法包括:In a preferred embodiment, the culturing method includes:

(1)将前面任一所述的里氏木霉菌株或其孢子活化后,制成浓度为106~108个/mL的孢子悬液,再制备为种子液,然后将种子液接种入液体发酵培养基中,初始pH 5.0±0.2,于28±2℃,200±50rpm摇床中培养5-7天;所述的发酵培养基是含有按照质量体积比3±1%微晶纤维素和按照质量体积比2±0.5%麸皮的无机盐培养液;(1) After activating any of the aforementioned Trichoderma reesei strains or their spores, prepare a spore suspension with a concentration of 10 6 to 10 8 /mL, and then prepare a seed liquid, and then inoculate the seed liquid into In the liquid fermentation medium, the initial pH is 5.0 ± 0.2, and cultured at 28 ± 2 ° C and 200 ± 50 rpm in a shaker for 5-7 days; the fermentation medium contains 3 ± 1% microcrystalline cellulose in a mass-to-volume ratio. And the inorganic salt culture solution of 2±0.5% bran according to the mass volume ratio;

(2)将步骤(1)获得的发酵液离心分离,取上清液作为粗酶液。(2) Centrifuging the fermentation broth obtained in step (1), and taking the supernatant as crude enzyme liquid.

在本发明的另一方面,提供一种水解木质纤维素的方法,所述方法包括:(i)利用前面任一所述的里氏木霉菌株或其孢子、菌丝体、原生质体生产纤维素酶,和(ii)利用获得的纤维素酶水解木质纤维素。In another aspect of the present invention, there is provided a method for hydrolyzing lignocellulose, the method comprising: (i) utilizing any of the aforementioned Trichoderma reesei strains or their spores, mycelium, and protoplasts to produce fibers vegetase, and (ii) hydrolyzing lignocellulose using the obtained cellulase.

本发明的其它方面由于本文的公开内容,对本领域的技术人员而言是显而易见的。Other aspects of the invention will be apparent to those skilled in the art from the disclosure herein.

附图说明Description of drawings

图1、里氏木霉Rut-C30和高产菌株PPL3-1孢子的透射电镜照片。图1A为对照菌株Rut-C30,图1B为高产菌株PPL3-1,图中可以看出PPL3-1的囊泡明显增多,而孢壁也有部分增厚的现象。这可能和高产菌株分泌表达蛋白的能力有关。Figure 1. Transmission electron microscope photographs of Trichoderma reesei Rut-C30 and spores of high-yielding strain PPL3-1. Figure 1A shows the control strain Rut-C30, and Figure 1B shows the high-yielding strain PPL3-1. It can be seen that the vesicles of PPL3-1 are significantly increased, and the spore wall is also partially thickened. This may be related to the ability of high-yielding strains to secrete expressed proteins.

图2、里氏木霉不同菌株小瓶发酵后的滤纸酶活。Rut-C30菌株在10ml小摇瓶发酵体系,在麸皮和纤维素诱导7天后,滤纸酶活(FPA)为13U/ml,而PPL3-1在相同条件下发酵7天后为20U/ml,而进一步遗传育种获得的高产菌株PPLU4-6则可达26U/ml,而进一步过表达Xyr1后的高产菌株PPLXIM更可达30U/ml。Figure 2. The enzyme activity of filter paper after fermentation of different strains of Trichoderma reesei in vials. In the fermentation system of Rut-C30 strain in 10ml small shake flask, after induction of bran and cellulose for 7 days, the filter paper enzyme activity (FPA) was 13U/ml, while PPL3-1 was 20U/ml after 7 days of fermentation under the same conditions, while The high-yielding strain PPLU4-6 obtained by further genetic breeding can reach 26U/ml, and the high-yielding strain PPLXIM after further overexpression of Xyr1 can reach 30U/ml.

具体实施方式Detailed ways

本发明人通过实验室驯化、物理化学诱变等遗传育种方法筛选获得了一株高产纤维素酶的里氏木霉菌株Trichoderma reesei(anamorph)/Hypocrea jecorina(teleomorph)PPL3-1(hygr)(以下简称PPL3-1),保藏号为CCTCC NO:M 2014561。与工业上常用的里氏木霉高产菌株相比其存在明显的优势,PPL3-1菌株生产的纤维素酶在酶活和产量上都显著提高。本发明人还通过进一步优化提高了PPL3-1菌株的纤维素酶产量。因此,本发明的PPL3-1菌株及其经改造的菌株具有很好的工业应用前景。The inventor obtained a high-yielding cellulase-producing Trichoderma reesei (anamorph)/Hypocrea jecorina (teleomorph) PPL3-1 (hyg r ) ( Hereinafter referred to as PPL3-1), the deposit number is CCTCC NO: M 2014561. Compared with the high-yielding strains of Trichoderma reesei commonly used in industry, it has obvious advantages. The cellulase produced by the PPL3-1 strain is significantly improved in enzyme activity and yield. The inventors also improved the cellulase production of the PPL3-1 strain by further optimization. Therefore, the PPL3-1 strain of the present invention and its transformed strain have good industrial application prospects.

如本文所用,术语“本发明的里氏木霉高产菌株PPL3-1”、“本发明的里氏木霉高产突变子PPL3-1”、“本发明的融合子PPL3-1”、“Trichoderma reesei(anamorph)/Hypocreajecorina(teleomorph)PPL3-1(hygr)”、“Trichoderma reesei PPL3-1”、“Hypocreajecorina PPL3-1”、“PPL3-1”可互换使用。As used herein, the terms "Trichoderma reesei high-yielding strain PPL3-1 of the present invention", "Trichoderma reesei high-producing mutant PPL3-1 of the present invention", "fuson PPL3-1 of the present invention", "Trichoderma reesei" (anamorph)/Hypocreajecorina (teleomorph) PPL3-1 (hyg r )", "Trichoderma reesei PPL3-1", "Hypocreajecorina PPL3-1", "PPL3-1" are used interchangeably.

里氏木霉是商业纤维素酶的主要生产微生物,但目前工业上应用的常见菌株所产的纤维素酶系中的β-葡糖苷酶比例与活性都偏低,成为高效水解纤维素,特别是工业上预处理秸秆的限制因子。因此,目前的商品化纤维素酶,都是在里氏木霉生产的酶制剂中再添加或复配从其他真菌(例如高产β-葡萄糖苷酶的黑曲霉)生产的β-葡糖苷酶。Trichoderma reesei is the main producer of commercial cellulase, but the ratio and activity of β-glucosidase in the cellulase system produced by common strains currently used in industry are low, making it highly efficient in hydrolyzing cellulose, especially It is the limiting factor for industrial pretreatment of straw. Therefore, in the current commercial cellulase, β-glucosidase produced from other fungi (such as Aspergillus niger, which is high-producing β-glucosidase) is added or compounded to the enzyme preparation produced by Trichoderma reesei.

本发明人通过对里氏木霉野生菌株在纤维素平板上进行实验室驯化,根据纤维素平板上的水解圈大小选出纤维素酶产量较高的菌株,继而通过物理化学等方法进行遗传育种,获得的高产突变株再进行原生质体融合获得一系列融合子,再对这些融合子进行大规模滤纸酶活筛选工作,最终获得高产菌株PPL3-1。该纤维素酶高产菌株的纤维素酶酶系和其他里氏木霉工业菌株Rut-C30相比,其最适pH和最适温度一致,而β-葡萄糖苷酶酶活则存在一定的优势,粗酶液的pNPGase酶活达30IU/mL以上,弥补了常见纤维素酶工业生产菌株β-葡萄糖苷酶不足这一瓶颈,而滤纸酶活则在20IU/mL以上,比Rut-C30相比也存在优势,因此是一株良好的工业纤维素酶菌株。其纤维素酶和其他里氏木霉工业菌株一样,可用于食品、饲料、保健、生物能源等领域,非常具有应用价值。The inventors carried out laboratory domestication of Trichoderma reesei wild strains on cellulose plates, selected strains with higher cellulase yield according to the size of the hydrolysis circle on the cellulose plates, and then carried out genetic breeding by physical and chemical methods and other methods. , the obtained high-yielding mutant strains were fused with protoplasts to obtain a series of fusants, and then these fusants were screened by large-scale filter paper enzyme activity, and finally the high-yielding strain PPL3-1 was obtained. Compared with other industrial strains of Trichoderma reesei Rut-C30, the cellulase enzyme system of the cellulase high-producing strain has the same optimum pH and optimum temperature, and the β-glucosidase enzyme activity has certain advantages. The pNPGase enzyme activity of the crude enzyme solution is above 30IU/mL, which makes up for the bottleneck of the lack of β-glucosidase in common cellulase industrial production strains, while the filter paper enzyme activity is above 20IU/mL, which is better than Rut-C30. There are advantages, so it is a good industrial cellulase strain. Like other industrial strains of Trichoderma reesei, its cellulase can be used in food, feed, health care, bioenergy and other fields, and has great application value.

本发明获得高产菌株,β-葡萄糖苷酶的活性得到了显著提升,加上转化子发酵培养的碳源是麸皮等简单易得的农用废弃物,在提高纤维素酶制剂的水解效率方面有着十分明显的作用,如应用在食品其他行业生产中,也将大大降低其生产成本,有着更为广泛的工业应用潜力。The present invention obtains high-yielding strains, and the activity of β-glucosidase is significantly improved. In addition, the carbon source for the fermentation and cultivation of transformants is simple and readily available agricultural wastes such as bran, which can improve the hydrolysis efficiency of cellulase preparations. Very obvious role, such as application in the production of other food industries, will also greatly reduce its production cost, has a wider potential for industrial applications.

进一步地,本发明的高产纤维素酶菌株PPL3-1可作为出发菌株,通过实验室驯化、遗传育种、分子遗传操作等手段进行进一步改良而获得产量更高或酶系更为优化的衍生菌株。通过对PPL3-1进行遗传育种筛选获得酶活更为提高的菌株,进而进行单孢分离,可进一步筛选获得滤纸酶活提高30%的高产菌株PPLU4-6,该高产菌株可作为分子遗传操作的对象,进行无筛选标记的基因操作,在工业上有着巨大的应用前景。Further, the high-yielding cellulase strain PPL3-1 of the present invention can be used as a starting strain, and can be further improved by means of laboratory domestication, genetic breeding, molecular genetic manipulation, etc. to obtain a derivative strain with higher yield or more optimized enzyme system. Through genetic breeding and screening of PPL3-1 to obtain a strain with more improved enzyme activity, and then for single spore isolation, a high-yielding strain PPLU4-6 with a 30% increase in filter paper enzyme activity can be obtained by further screening, and this high-yield strain can be used as molecular genetic manipulation. It has a huge application prospect in industry to carry out genetic manipulation without selection marker.

更进一步的,本发明高产纤维素酶菌株PPL3-1的衍生菌株PPLU4-6(尿嘧啶缺陷型菌株),作为分子操作的对象,可以敲入和敲除基因等遗传操作,进行有目的性的遗传改造,或过表达里氏木霉表达量过少的纤维素酶基因,如过表达纤维素酶激活因子Xyr1等,或敲除纤维素酶阻遏因子Cre1等。Further, the derivative strain PPLU4-6 (uracil-deficient strain) of the high-yielding cellulase strain PPL3-1 of the present invention, as the object of molecular manipulation, can knock-in and knock-out genes and other genetic manipulations to carry out purposeful Genetic modification, or overexpression of Trichoderma reesei cellulase genes, such as overexpression of cellulase activator Xyr1, etc., or knockout of cellulase repressor Cre1, etc.

本发明的菌株是活体细胞,一旦获得了本发明菌株的孢子、菌丝、原生质体及其相关的还有活体细胞的培养混合物,就可以用接种传代、再生等手段来大批量地获得本发明的菌株。这通常是将其接种到固体平板培养基或液体培养基中进行菌株的扩大培养而获得本发明的活体细胞。而获得的活体细胞可进一步进行实验室驯化、遗传育种和分子遗传操作等来获得突变体和转化子。也可利用本发明作为异源表达的宿主细胞。The strain of the present invention is a living cell. Once the spores, mycelia, protoplasts of the strain of the present invention and their related culture mixtures as well as living cells are obtained, the present invention can be obtained in large quantities by means of inoculation, passage, regeneration, etc. strains. This is usually by inoculating it into a solid plate medium or a liquid medium to expand the strain to obtain the living cells of the present invention. The obtained living cells can be further subjected to laboratory domestication, genetic breeding and molecular genetic manipulation to obtain mutants and transformants. The present invention can also be utilized as a host cell for heterologous expression.

本领域的技术人员熟知的方法能用于诱变本发明的活体细胞,而造成活体细胞的基因编码改变、酶活特性和形态学上的改变。这些方法包括利用射线、粒子、激光、紫外光等物理方法,利用烷化剂、碱基类似物(base analog)、羟胺(hydroxylamine)、吖啶色素等化学诱变方法。诱变可是以上一种方法或多种方法的多代诱变,且不限于这些方法。基于本发明提供的菌株,可以进一步进行物理化学等方式进行育种,也可以导入新的纤维素酶基因和相关调控基因,获得的突变体和转化子产酶性能可获得进一步提高,所述的育种方法为上述的一种或一种以上相结合。Methods well known to those skilled in the art can be used to mutagenize the living cells of the present invention, resulting in changes in gene coding, enzymatic properties and morphological changes in the living cells. These methods include physical methods such as rays, particles, lasers, and ultraviolet light, and chemical mutagenesis methods such as alkylating agents, base analogs, hydroxylamine, and acridine dyes. Mutagenesis may be multiple generations of one or more of the above methods, and is not limited to these methods. Based on the strains provided by the present invention, physical and chemical methods can be further carried out for breeding, and new cellulase genes and related regulatory genes can also be introduced, and the enzyme production performance of the obtained mutants and transformants can be further improved. The method is a combination of one or more of the above.

本领域的技术人员熟知的方法能用于构建表达构建物(载体)和进一步改造本发明菌株。例如,对于菌株中已发现或新发现的与纤维素酶生产相关的信号途径、信号通路及其中涉及的蛋白进行进一步的改良(例如增加有益因子的表达,减少有害因子的表达)。Methods well known to those skilled in the art can be used to construct expression constructs (vectors) and further engineer the strains of the invention. For example, further improvement (eg, increasing the expression of beneficial factors and reducing the expression of harmful factors) has been carried out on the signaling pathways, signaling pathways and proteins involved in cellulase production that have been discovered or newly discovered in the strain.

用重组DNA转化宿主细胞可用本领域技术人员熟知的常规技术进行。所用的步骤在本领域众所周知。如农杆菌介导的真菌转化方法,原生质体转化方法、电击转化方法、CRISPR-Cas9基因组编辑法、基因枪法等,且不限于这些方法。Transformation of host cells with recombinant DNA can be performed using conventional techniques well known to those skilled in the art. The procedures used are well known in the art. Such as Agrobacterium-mediated fungal transformation methods, protoplast transformation methods, electroshock transformation methods, CRISPR-Cas9 genome editing methods, biolistic methods, etc., but are not limited to these methods.

本发明公开的里氏木霉菌株PPL3-1能够利用含有木质纤维素的工农业生产废弃物,如麸皮、玉米浆、豆饼粉等廉价原料,通过液态或固态发酵生产纤维素酶,其优势在于所产纤维素酶活力高,组分合理,水解木质纤维素能力强。相同发酵条件下,该菌株是常用工业菌株Rut-C30纤维素酶产量的两倍。本发明为解决纤维素资源利用中酶活力不高、酶组分不合理导致的生产成本高,糖化效率低等问题提供了新的菌种资源。The Trichoderma reesei strain PPL3-1 disclosed in the present invention can utilize the industrial and agricultural production wastes containing lignocellulose, such as bran, corn steep liquor, soybean meal flour and other cheap raw materials, to produce cellulase through liquid or solid state fermentation. The cellulase produced has high activity, reasonable components and strong ability to hydrolyze lignocellulose. Under the same fermentation conditions, the cellulase yield of this strain was twice that of the commonly used industrial strain Rut-C30. The invention provides a new strain resource for solving the problems of high production cost and low saccharification efficiency caused by low enzyme activity and unreasonable enzyme components in the utilization of cellulose resources.

本发明在制备纤维素酶方面的应用可以通过液态发酵实现,作为一个优选实施例方式,发酵方法包括:(1)将里氏木霉PPL3-1菌种在土豆培养基制成的斜面或平板活化后,制成浓度为106~108mL-1的孢子悬液,按10%的接种量接入沙堡氏培养基(种子培养基:1%酵母膏,1%蛋白胨,4%葡萄糖)中,28℃,200rpm振荡培养,得种子液,然后将种子液以10%接种量接入液体发酵培养基中,初始pH 5.0,装液量为10mL于50mL三角瓶,于28℃,200rpm摇床中培养5-7天;(2)将步骤(1)获得的发酵液离心分离,取上清液作为粗酶液;所述的发酵培养基是含有5%诱导物(3%微晶纤维素和2%麸皮)的无机盐培养液(0.4%KH2PO4,0.28%(NH4)2SO4,0.06%MgSO4·7H2O,0.05%CaCl2,0.06%urea,0.3%tryptone,0.1%Tween 80,0.5%CaCO3,0.001%FeSO4·7H2O,0.00032%MnSO4·H2O,0.00028%ZnSO4·7H2O,0.0004%CoCl2)。The application of the present invention in the preparation of cellulase can be realized by liquid fermentation. As a preferred embodiment, the fermentation method includes: (1) a slant or flat plate made of Trichoderma reesei PPL3-1 strain on a potato culture medium After activation, a spore suspension with a concentration of 10 6 to 10 8 mL -1 was prepared, and the inoculum of 10% was inserted into Sabouraud's medium (seed medium: 1% yeast extract, 1% peptone, 4% glucose) ), 28 ℃, 200rpm shaking culture, get the seed liquid, then insert the seed liquid into the liquid fermentation medium with 10% inoculum, the initial pH is 5.0, the filling amount is 10mL in a 50mL conical flask, at 28 ℃, 200rpm Cultivate in a shaker for 5-7 days; (2) centrifuge the fermentation broth obtained in step (1), and take the supernatant as crude enzyme liquid; the fermentation medium contains 5% inducer (3% microcrystalline cellulose and 2% bran) in inorganic salt broth (0.4% KH 2 PO 4 , 0.28% (NH 4 ) 2 SO 4 , 0.06% MgSO 4 ·7H 2 O, 0.05% CaCl 2 , 0.06% urea, 0.3 % tryptone, 0.1% Tween 80, 0.5 % CaCO3, 0.001% FeSO4.7H2O , 0.00032 % MnSO4.H2O , 0.00028 % ZnSO4.7H2O , 0.0004 % CoCl2 ) .

应用于培养本发明的菌株的培养基和培养方法并不限于以上公布的那些,其它常规应用于培养里氏木霉的培养基和培养方法也可以应用于本发明中。The culture medium and culture method applied for culturing the strain of the present invention are not limited to those disclosed above, and other medium and culture method conventionally used for culturing Trichoderma reesei can also be applied in the present invention.

如上所述发酵体系可以进行体系放大进行工业生产,根据体系的大小不同,本领域技术人员根据所掌握的一般知识可以进行适当的调整以有利于菌株的生长或生产。As mentioned above, the fermentation system can be scaled up for industrial production. Depending on the size of the system, those skilled in the art can make appropriate adjustments to facilitate the growth or production of strains based on their general knowledge.

如上所述液体发酵粗酶液,可经超滤、盐析或有机溶剂沉淀等方法获得较纯的纤维素酶或酶粉。通过发酵并测定所产纤维素酶的滤纸酶活(FPA)、CMC酶活及β-葡萄糖苷酶酶活。应理解,分离和纯化纤维素酶的方法不受限于本发明中所提供的那些,其它本领域技术人员已知的方法也可应用于本发明中。As mentioned above, the crude enzyme liquid of liquid fermentation can be obtained by ultrafiltration, salting out or organic solvent precipitation and other methods to obtain purer cellulase or enzyme powder. The filter paper activity (FPA), CMC activity and β-glucosidase activity of the produced cellulase were determined by fermentation. It should be understood that the methods of isolating and purifying cellulase are not limited to those provided in the present invention, and other methods known to those skilled in the art can also be applied in the present invention.

下面结合具体实施例,进一步阐述本发明。应理解,这些实施例仅用于说明本发明而不用于限制本发明的范围。下列实施例中未注明具体条件的实验方法,通常按照常规条件如J.萨姆布鲁克等编著,分子克隆实验指南,第三版,科学出版社,2002中所述的条件,或按照制造厂商所建议的条件。The present invention will be further described below in conjunction with specific embodiments. It should be understood that these examples are only used to illustrate the present invention and not to limit the scope of the present invention. The experimental methods that do not indicate specific conditions in the following examples are usually in accordance with conventional conditions such as those described in J. Sambrook et al., Molecular Cloning Experiment Guide, 3rd Edition, Science Press, 2002, or according to the conditions described by the manufacturer. the proposed conditions.

实施例1、利用里氏木霉高产菌株进行纤维素酶生产Embodiment 1, utilize Trichoderma reesei high-yielding strain to carry out cellulase production

为了保证获得的PPL3-1(保藏号为CCTCC NO:M 2014561)的产纤维素酶的能力,通过液态发酵并测定粗酶液的滤纸酶活实现:In order to ensure the cellulase-producing ability of the obtained PPL3-1 (the deposit number is CCTCC NO:M 2014561), by liquid fermentation and measuring the filter paper enzyme activity of the crude enzyme liquid to achieve:

(1)将里氏木霉PPL3-1菌种接种在土豆培养基制成的平板上置于28℃培养7天后,制成浓度为106~108个/mL的孢子悬液,按10%(v/v)的接种量接入沙堡氏培养基(种子培养基(v/v):1%酵母膏,1%蛋白胨,4%葡萄糖)中,28℃,200rpm振荡培养,得种子液,然后将种子液以10%(v/v)接种量接入液体发酵培养基中,初始pH 5.0,装液量为10mL于50mL三角瓶,于28℃,200rpm摇床中培养5-7天;所述的发酵培养基是含有5%诱导物(3%微晶纤维素和2%麸皮)的无机盐培养液(0.4%KH2PO4,0.28%(NH4)2SO4,0.06%MgSO4·7H2O,0.05%CaCl2,0.06%尿素,0.3%蛋白胨,0.1%Tween 80,0.5%CaCO3,0.001%FeSO4·7H2O,0.00032%MnSO4·H2O,0.00028%ZnSO4·7H2O,0.0004%CoCl2),(1) Inoculate the Trichoderma reesei PPL3-1 strain on a potato medium plate and place it at 28°C for 7 days to make a spore suspension with a concentration of 10 6 to 10 8 cells/mL. % (v/v) of the inoculum amount was inserted into Sabouraud's medium (seed medium (v/v): 1% yeast extract, 1% peptone, 4% glucose), 28°C, 200rpm shaking culture to obtain seeds 10% (v/v) inoculum in liquid fermentation medium, the initial pH is 5.0, and the liquid volume is 10mL in a 50mL conical flask, and cultured in a shaker at 28°C for 5-7 days at 200rpm. days; the fermentation medium was an inorganic salt broth (0.4% KH 2 PO 4 , 0.28% (NH 4 ) 2 SO 4 , 5% inducer (3% microcrystalline cellulose and 2% bran), 0.06% MgSO 4 ·7H 2 O, 0.05% CaCl 2 , 0.06% Urea, 0.3% Peptone, 0.1% Tween 80, 0.5% CaCO 3 , 0.001% FeSO 4 ·7H 2 O, 0.00032% MnSO 4 ·H 2 O, 0.00028% ZnSO 4 ·7H 2 O, 0.0004% CoCl 2 ),

(2)将步骤(1)获得的发酵液离心分离,取上清液作为粗酶液。(2) Centrifuging the fermentation broth obtained in step (1), and taking the supernatant as crude enzyme liquid.

(3)在0.05mol/L pH5.0的醋酸-醋酸钠或柠檬酸-柠檬酸钠缓冲液中,将里氏木霉PPL3-1粗酶液加入到滤纸中,50~60℃水解60min,测定滤纸上的酶的酶活。结果测得,酶活可达20IU/mL以上。(3) In 0.05mol/L acetic acid-sodium acetate or citric acid-sodium citrate buffer solution of pH5.0, add Trichoderma reesei PPL3-1 crude enzyme solution to filter paper, hydrolyze at 50~60℃ for 60min, The enzyme activity of the enzyme on the filter paper was determined. The results showed that the enzyme activity could reach more than 20IU/mL.

实施例2、应用纤维素酶进行木质纤维素的降解Example 2. Degradation of lignocellulose using cellulase

为了验证里氏木霉高产纤维素酶菌株PPL3-1对天然木质纤维素的降解能力。本发明人采用10%稀硫酸处理的玉米秸秆,经过水洗烘干以后的预处理秸秆作为材料,在1mL0.05mol/L pH 5.0的醋酸-醋酸钠或柠檬酸-柠檬酸钠缓冲液中,将里氏木霉PPL3-1所产纤维素酶的30μl粗酶液加入到30mg预处理玉米秸秆中,在震荡摇床中,以200rpm的速度震荡,50℃水解24小时,离心后取上清液,用DNS的方法测定上清液中的还原糖,换算出体系中还原糖的总量。研究发现利用本发明菌株所产的纤维素酶可以产生12~16mg/mL还原糖(简单糖),而作为对照的Rut-C30的纤维素酶仅产生5-8mg/mL的还原糖(简单糖),存在十分明显的优势。In order to verify the ability of Trichoderma reesei high-producing cellulase strain PPL3-1 to degrade natural lignocellulose. The inventors used corn stalks treated with 10% dilute sulfuric acid, washed and dried the pretreated stalks as materials, in 1 mL of acetic acid-sodium acetate or citric acid-sodium citrate buffer solution of 0.05mol/L pH 5.0, 30 μl crude enzyme solution of cellulase produced by Trichoderma reesei PPL3-1 was added to 30 mg of pretreated corn stalks, shaken at a speed of 200 rpm in a shaking shaker, hydrolyzed at 50 °C for 24 hours, and centrifuged to take the supernatant , the reducing sugar in the supernatant was measured by DNS method, and the total amount of reducing sugar in the system was converted. The study found that the cellulase produced by the strain of the present invention can produce 12-16 mg/mL reducing sugar (simple sugar), while the cellulase of Rut-C30 as a control only produces 5-8 mg/mL reducing sugar (simple sugar). ), there are obvious advantages.

由上述结果可见,本发明菌株所产的纤维素酶可以水解β-1,4-糖苷键,获得还原糖。It can be seen from the above results that the cellulase produced by the strain of the present invention can hydrolyze β-1,4-glycosidic bonds to obtain reducing sugars.

实施例3、里氏木霉高产菌株PPL3-1的特性研究Embodiment 3. Characteristic study of Trichoderma reesei high-yielding strain PPL3-1

对PPL3-1菌株的孢子制片后进行透射电镜观察,发现PPL3-1的囊泡数目相较Rut-C30明显增加,而细胞壁也明显增厚(图1),这可能和PPL3-1高产纤维素酶的能力有关。Compared with Rut-C30, the number of vesicles in PPL3-1 was significantly increased, and the cell wall was also significantly thicker (Fig. 1), which may be related to the high fiber production of PPL3-1. the ability of the enzyme.

实施例4、里氏木霉菌株PPL3-1的基因工程改造Example 4. Genetic engineering of Trichoderma reesei strain PPL3-1

里氏木霉PPL3-1菌种接种在土豆培养基制成的平板上,28℃培养7天,用吐温生理盐水(含0.85%NaCl,0.02%Tween-80)将孢子洗下,制成浓度为106~108mL-1的孢子悬液,并均匀涂布于里氏木霉基本培养基(添加终浓度为2%和3%球磨纤维素粉以及0.1%triton X-100)制成的平板上,进行培养。待平板上有单菌落长出后,将水解圈明显增大的单菌落接到24孔板中进一步于28℃培养7天,再涂布于上述平板,再次选择水解圈明显增大的单菌、培养,进而通过纤维素酶活测定选取高产纤维素酶的菌株,从而选择到一株高产的菌株。所述的里氏木霉基本培养基为基础无机盐培养液(按照w/v,1%KH2PO4,0.6%(NH4)2SO4,0.1%MgSO4·7H2O,0.3%三柠檬酸钠·2H2O,0.0005%FeSO4·7H2O,0.00016%MnSO4·H2O,0.00014%ZnSO4·7H2O,0.0002%CaCl2·2H2O,pH 5.8),并添加终浓度为0.5%(w/v)的尿苷。Trichoderma reesei PPL3-1 strain was inoculated on a plate made of potato culture medium, cultivated at 28°C for 7 days, and washed the spores with Tween physiological saline (containing 0.85% NaCl, 0.02% Tween-80) to prepare The spore suspension with a concentration of 10 6 -10 8 mL -1 was evenly spread on Trichoderma reesei basic medium (adding final concentration of 2% and 3% ball milled cellulose powder and 0.1% triton X-100) cultured on the prepared plate. After a single colony grows on the plate, the single colony with a significantly enlarged hydrolysis circle is connected to a 24-well plate and further cultivated at 28°C for 7 days, and then spread on the above plate, and the single bacteria with a significantly enlarged hydrolysis circle is selected again. , culture, and then select a high-producing strain of cellulase by cellulase activity assay, so as to select a high-producing strain. The Trichoderma reesei basic medium is a basic inorganic salt culture solution (according to w/v, 1% KH 2 PO 4 , 0.6% (NH 4 ) 2 SO 4 , 0.1% MgSO 4 ·7H 2 O, 0.3% Sodium tricitrate·2H2O, 0.0005% FeSO4 · 7H2O , 0.00016 % MnSO4· H2O , 0.00014 % ZnSO4 · 7H2O , 0.0002% CaCl2 · 2H2O, pH 5.8), and Uridine was added at a final concentration of 0.5% (w/v).

上述获得的高产菌株进行单孢子分离,经过不小于10代的传代之后,选取纤维素酶稳定高产的菌株PPLU4-6。The high-yielding strains obtained above were isolated from single spores, and after passage of not less than 10 generations, strains PPLU4-6 with stable and high cellulase production were selected.

将PPLU4-6菌株接种在含有0.5%(w/v)尿苷的土豆培养基制成的平板上,28℃培养7天,用吐温生理盐水(含0.85%NaCl,0.02%Tween-80)将孢子洗下,并同步接种出发菌种PPL3-1,28℃培养7天后,按实施例1所述方法进行液体发酵,测定粗酶液的滤纸酶活,其中PPLU4-6单孢菌株的滤纸酶活达到26U/mL,相比出发菌株PPL3-1的滤纸酶活提高30%(图2)。The PPLU4-6 strain was inoculated on a plate made of potato medium containing 0.5% (w/v) uridine, and cultured at 28°C for 7 days, with Tween physiological saline (containing 0.85% NaCl, 0.02% Tween-80) Wash the spores, and simultaneously inoculate the starting strain PPL3-1. After culturing at 28°C for 7 days, carry out liquid fermentation according to the method described in Example 1, and measure the enzyme activity of the filter paper of the crude enzyme solution. The filter paper of the PPLU4-6 monospore strain The enzyme activity reached 26 U/mL, which was 30% higher than the filter paper enzyme activity of the starting strain PPL3-1 (Fig. 2).

本发明人发现PPLU4-6在缺乏尿苷的培养基中无法存活,因此考察PPLU4-6中是否存在尿苷合成相关基因ura3,ura5的缺陷。根据JGI中里氏木霉RutC-30的基因组序列,设计ura3,ura5基因的扩增引物,引物序列分别为:The present inventors found that PPLU4-6 could not survive in a medium lacking uridine, and therefore investigated whether there are defects in uridine synthesis-related genes ura3 and ura5 in PPLU4-6. According to the genome sequence of Trichoderma reesei RutC-30 in JGI, the amplification primers of ura3 and ura5 genes were designed. The primer sequences are:

ura3F:5’-GCTCTAGAATGGCACCACACCCGACGCT-3’(SEQ ID NO:1);ura3F: 5'-GCTCTAGAATGGCACCACACCCGACGCT-3' (SEQ ID NO: 1);

ura3R:5’-GCTCTAGACTATCGCAGCAGCCTCTCGG-3’(SEQ ID NO:2);ura3R: 5'-GCTCTAGACTATCGCAGCAGCCTCTCGG-3' (SEQ ID NO: 2);

ura5F:5’-GCTCTAGAATGGCTACCACCTCCCAGCT-3’(SEQ ID NO:3);ura5F: 5'-GCTCTAGAATGGCTACCACCTCCCAGCT-3' (SEQ ID NO: 3);

ura5R:5’-GCTCTAGATCAGTCAGTCGCCTTGTACT-3’(SEQ ID NO:4)。ura5R: 5'-GCTCTAGATCAGTCAGTCGCCTTGTACT-3' (SEQ ID NO: 4).

利用KOD高保真酶扩增里氏木霉PPL3-1的ura3和ura5基因片段,3’端加A处理后,利用TA克隆试剂盒克隆到pMD18-T simple载体中,PCR验证阳性克隆后,样品送样测序。ura5基因野生型的序列如SEQ ID NO:5(711bp)所示。对于本实施例扩增获得的序列的测序结果表明,ura5基因的氨基酸序列存在突变(L135P,其编码序列相应位点由CTG突变为CCG)。因此,可以确定PPL3-1的尿嘧啶核苷营养缺陷是由ura5基因突变导致的。可以利用该突变作为筛选标记,对PPLU4-6进行进一步的基因工程改造。The ura3 and ura5 gene fragments of Trichoderma reesei PPL3-1 were amplified by KOD high-fidelity enzyme, and the 3' end was treated with A, and then cloned into pMD18-T simple vector using TA cloning kit. Sample sequencing. The wild-type sequence of the ura5 gene is shown in SEQ ID NO: 5 (711 bp). The sequencing results of the sequences amplified in this example showed that there was a mutation in the amino acid sequence of the ura5 gene (L135P, the corresponding site of the coding sequence was mutated from CTG to CCG). Therefore, it can be determined that the uridine auxotrophy of PPL3-1 is caused by the mutation of the ura5 gene. This mutation can be used as a selectable marker for further genetic engineering of PPLU4-6.

通过PCR从草酸青霉扩增包含有启动子序列的ura5基因(SEQ ID NO:6)作为筛选标记,所用引物:The ura5 gene (SEQ ID NO: 6) containing the promoter sequence was amplified by PCR from Penicillium oxalicum as a selection marker using primers:

正向引物:5’TCTAGAGCCGCATAGTTAAGCC 3’(SEQ ID NO:10),其5’端添加Xba I识别位点:TCTAGA;Forward primer: 5' TCTAGAGCCGCATAGTTAAGCC 3' (SEQ ID NO: 10), the 5' end adds Xba I recognition site: TCTAGA;

反向引物:5’ACTAGTCAGGGCTGGTGACGGAA 3’(SEQ ID NO:11),其5’端添加Spe I识别位点ACTAGT,Reverse primer: 5' ACTAGTCAGGGCTGGTGACGGAA 3' (SEQ ID NO: 11), the Spe I recognition site ACTAGT is added to its 5' end,

扩增产物用Xba I和Spe I双酶切后连入经过同样双酶切的pHDt/sk(参见Microbial Cell Factories,2012,11:21)中,获得pHDt/sk-ura5。The amplified product was double digested with Xba I and Spe I and then ligated into pHDt/sk (see Microbial Cell Factories, 2012, 11:21) that had undergone the same double digestion to obtain pHDt/sk-ura5.

通过PCR从菌株PPL3-1的基因组中分离里氏木霉纤维素酶转录激活因子Xyr1(SEQID NO:7),所用引物如下:Trichoderma reesei cellulase transcription activator Xyr1 (SEQ ID NO: 7) was isolated from the genome of strain PPL3-1 by PCR using the following primers:

正向引物:5’TCTAGAATGTTGTCCAATCCTCTCCGTCG 3’(SEQ ID NO:8),其5’端添加Xba I识别位点:TCTAGA;Forward primer: 5' TCTAGAATGTTGTCCAATCCTCTCCGTCG 3' (SEQ ID NO: 8), the 5' end adds Xba I recognition site: TCTAGA;

反向引物为5’TCTAGATTAGAGGGCCAGACCGGTTCCGT 3’(SEQ ID NO:9),其5’端添加Xba I识别位点:TCTAGA。The reverse primer is 5' TCTAGATTAGAGGGCCAGACCGGTTCCGT 3' (SEQ ID NO: 9), and Xba I recognition site: TCTAGA is added to its 5' end.

将PCR产物纯化后用Xba I酶切,应用Axygen PCR产物柱回收试剂盒回收酶切的DNA片段,将该DNA片段和经同样酶切的回收的载体pHDt/sk-ura5去磷酸化处理后,用T4DNA连接酶在16℃下连接过夜,得到重组表达载体pHDt/sk-ura5-Xyr1。表达产物的N末端提供的His标签(6×His-Tag),便于后续纯化。将上述构建好的质粒pHDt/sk-ura5-Xyr1转化入根癌农杆菌AGL1中,在根癌农杆菌的介导下转化入里氏木霉PPLU4-6菌株中。所获得的菌株是过表达激活因子的菌株。After the PCR product was purified, it was digested with Xba I, and the DNA fragment of the enzyme cut was recovered using the Axygen PCR product column recovery kit. The recombinant expression vector pHDt/sk-ura5-Xyr1 was obtained by ligating overnight at 16°C with T4 DNA ligase. The His-tag (6×His-Tag) provided at the N-terminus of the expression product is convenient for subsequent purification. The plasmid pHDt/sk-ura5-Xyr1 constructed above was transformed into Agrobacterium tumefaciens AGL1, and then transformed into Trichoderma reesei PPLU4-6 strain under the mediation of Agrobacterium tumefaciens. The obtained strain is a strain overexpressing the activator.

获得的转化子按实施例1所述方法进行液体发酵,测定粗酶液的滤纸酶活,其中PPLXIM单孢菌株的滤纸酶活达到30U/mL,酶活有了很显著地提高(图2)。The obtained transformants were subjected to liquid fermentation according to the method described in Example 1, and the filter paper enzyme activity of the crude enzyme solution was measured. The filter paper enzyme activity of the PPLXIM monospore strain reached 30U/mL, and the enzyme activity was significantly improved (Fig. 2). .

生物材料保藏biological material preservation

本发明的里氏木霉菌株Trichoderma reesei(anamorph)/Hypocrea jecorina(teleomorph)PPL3-1(hygr)(简称PPL3-1)保藏在中国典型培养物保藏中心(CCTCC,中国武汉),保藏号CCTCC NO:M 2014561;保藏日2014年11月11日。The Trichoderma reesei strain Trichoderma reesei (anamorph)/Hypocrea jecorina (teleomorph) PPL3-1 (hyg r ) (abbreviated as PPL3-1) of the present invention is preserved in the China Center for Type Culture Collection (CCTCC, Wuhan, China), and the deposit number is CCTCC NO:M 2014561; deposited on November 11, 2014.

在本发明提及的所有文献都在本申请中引用作为参考,就如同每一篇文献被单独引用作为参考那样。此外应理解,在阅读了本发明的上述讲授内容之后,本领域技术人员可以对本发明作各种改动或修改,这些等价形式同样落于本申请所附权利要求书所限定的范围。All documents mentioned herein are incorporated by reference in this application as if each document were individually incorporated by reference. In addition, it should be understood that after reading the above teaching content of the present invention, those skilled in the art can make various changes or modifications to the present invention, and these equivalent forms also fall within the scope defined by the appended claims of the present application.

Figure IDA0000647857830000011
Figure IDA0000647857830000011

Figure IDA0000647857830000021
Figure IDA0000647857830000021

Figure IDA0000647857830000031
Figure IDA0000647857830000031

Figure IDA0000647857830000041
Figure IDA0000647857830000041

Figure IDA0000647857830000051
Figure IDA0000647857830000051

Claims (10)

1.一种分离的里氏木霉菌株,其特征在于,所述的菌株在中国典型培养物保藏中心的保藏号为CCTCC NO: M 2014561。1. an isolated Trichoderma reesei bacterial strain, is characterized in that, the preservation number of described bacterial strain in China Type Culture Collection is CCTCC NO: M 2014561. 2.一种孢子,其是权利要求1所述的里氏木霉菌株的孢子。2. A spore which is the spore of the Trichoderma reesei strain of claim 1. 3.一种菌丝体,其是权利要求1所述的里氏木霉菌株的菌丝体。3. A mycelium, which is the mycelium of the Trichoderma reesei strain of claim 1. 4.一种原生质体,其是权利要求1所述的里氏木霉菌株的原生质体。4. A protoplast, which is the protoplast of the Trichoderma reesei strain of claim 1. 5.权利要求1所述的里氏木霉菌株的用途,其特征在于,用于生产纤维素酶;或用于水解β-1,4-糖苷键。5. Use of the Trichoderma reesei strain according to claim 1, characterized in that, for producing cellulase; or for hydrolyzing β-1,4-glycosidic bonds. 6.如权利要求5所述的用途,其特征在于,所述的纤维素酶用于水解木质纤维素。6. The use of claim 5, wherein the cellulase is used to hydrolyze lignocellulose. 7.如权利要求6所述的用途,其特征在于,所述木质纤维素存在于包括下组的材料:玉米秸杆、玉米芯、稻草、稻壳、麦秸杆、高粱杆、木糖渣、甘蔗渣或其组合。7. purposes as claimed in claim 6 is characterized in that, described lignocellulose is present in the material comprising the following group: corn stover, corn cob, straw, rice husk, wheat straw, sorghum stalk, xylose residue , bagasse or a combination thereof. 8.一种生产纤维素酶的方法,其特征在于,所述方法包括:培养权利要求1所述的里氏木霉菌株,使其生产纤维素酶。8. A method for producing cellulase, characterized in that the method comprises: culturing the Trichoderma reesei strain of claim 1 to produce cellulase. 9.如权利要求8所述的方法,其特征在于,培养方法包括:9. The method of claim 8, wherein the culturing method comprises: (1) 将权利要求1所述的里氏木霉菌株的孢子活化后,制成浓度为106 ~ 108 个/mL的孢子悬液,再制备为种子液,然后将种子液接种入液体发酵培养基中,初始pH 5.0±0.2,于28±2℃,200±50rpm摇床中培养5-7天;所述的发酵培养基是含有按照质量体积比3±1%微晶纤维素和按照质量体积比2±0.5%麸皮的无机盐培养液;(1) After activating the spores of the Trichoderma reesei strain according to claim 1, prepare a spore suspension with a concentration of 10 6 to 10 8 /mL, and then prepare it into a seed liquid, and then inoculate the seed liquid into the liquid In the fermentation medium, the initial pH is 5.0 ± 0.2, and cultured at 28 ± 2 ° C and 200 ± 50 rpm in a shaker for 5-7 days; the fermentation medium contains 3 ± 1% microcrystalline cellulose and According to the mass volume ratio of 2±0.5% bran inorganic salt culture solution; (2) 将步骤(1)获得的发酵液离心分离,取上清液作为粗酶液。(2) Centrifuge the fermentation broth obtained in step (1), and take the supernatant as crude enzyme liquid. 10.一种水解木质纤维素的方法,其特征在于,所述方法包括:(i)利用权利要求1所述的里氏木霉菌株生产纤维素酶,和(ii)利用获得的纤维素酶水解木质纤维素。10. A method for hydrolyzing lignocellulose, wherein the method comprises: (i) utilizing the Trichoderma reesei strain of claim 1 to produce cellulase, and (ii) utilizing the obtained cellulase Hydrolysis of lignocellulose.
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