CN102887951A - Tuberculosis peptide Ag85B199-207 specific TCR and recombinant retroviral vector and use thereof - Google Patents

Tuberculosis peptide Ag85B199-207 specific TCR and recombinant retroviral vector and use thereof Download PDF

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CN102887951A
CN102887951A CN2012103265698A CN201210326569A CN102887951A CN 102887951 A CN102887951 A CN 102887951A CN 2012103265698 A CN2012103265698 A CN 2012103265698A CN 201210326569 A CN201210326569 A CN 201210326569A CN 102887951 A CN102887951 A CN 102887951A
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tuberculosis
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CN102887951B (en
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马骊
郝佩佩
温茜
罗微
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Southern Medical University
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Abstract

The invention discloses a tuberculosis peptide Ag85B199-207 specific TCR (T cell receptor), and a recombinant retroviral vector and use thereof. A tuberculosis peptide Ag 85B199-207 (KLVANNTRL) TCR is screened out; the TCR is carried by a retroviral vector to transfect CD8+T cells and thus CD8+T cells in which tuberculosis peptide Ag85B199-207 specific TCR is expressed are obtained. The CD8+T cells modified by the TCR gene can express exogenous TCR genes, specifically identify tuberculosis peptide Ag85B199-207, and mediate secretion of IFN-gamma and TNF-alpha cytokines and the cytotoxicity of cells tuberculosis. The TCR has gene therapy value of tuberculosis, so a new way for adoptive cellular immunotherapy of tuberculosis is provided.

Description

A kind of tuberculosis peptide Ag85B 199-207Specificity TCR, its recombinant retroviral vector and application
Technical field
The invention belongs to bioengineering field, be specifically related to a kind of tuberculosis antigen peptide specific φt cell receptor (TCR), and a kind of retroviral vector for the tuberculosis treatment that utilizes this TCR to prepare, the CD8 that the retroviral vector transfection obtains +T cell and the application in the preparation anti-tuberculosis drugs thereof.
Background technology
Tuberculosis is the highest transmissible disease of infection rate in the global range, and case fatality rate is only second to acquired immune deficiency syndrome (AIDS).In recent years, occur together and infect and resistance and multiple antibiotic resistant strain popular along with increase, HIV and the tubercule bacillus of movement of population, make global tuberculosis revivable, present the gesture of staging a comeback.According to the WHO statistical report, the whole world has 1/3 population to be subject to tubercle bacillus affection, and tuberculosis patient reaches 2,000 ten thousand, annual neopathy number 800-1000 ten thousand, because of tuberculosis death toll 3,000,000.China is that 22 tuberculosis height are born one of country in the world, the tuberculosis number is in the whole world second, the tubercle bacillus affection number surpasses 600,000,000 at present, tuberculosis patient reaches 6,000,000 more than, annual neopathy number 1,500,000, because of tuberculosis death toll 250,000, national pulmonary tuberculosis report number of the infected and death toll are in first of the various transmissible diseases always.
Tuberculotherapy is still take chemotherapy as main at present, but there is long, the shortcoming such as toxic side effect the is large course for the treatment of, reduced patient's compliance of taking medicine, patient is irregular to take medicine, voluntarily drug withdrawal, selectivity are taken medicine etc. all may improve the probability of Mycobacterium tuberculosis drug-resistant, the generation of resistant organism is the basic reason that causes the tuberculosis refractory, and single adjustment chemotherapy regimen effect is limited; And chemotherapy can't solve Endogenous relapse and Exogenous reinfection low because of immunity of organisms or that defective causes.Therefore, starting new effective methods for the treatment of has become the task of top priority!
T cell antigen receptor (T cell receptor, TCR) is the characteristic sign of all T cell surfaces, plays a crucial role in the identification of T cell antigen.TCR is the heterodimer that is made of two peptide chains of α, β, and every peptide chain can be divided into again variable region (V district), constant region (C district), several parts such as cross-film district and cytoplasmic region; Its cytoplasmic region is very short, and the signal transmission is mainly by carrying out with its CD3 molecule of being combined with non covalent bond.TCR molecule contactin, its antigen-specific is present in the V district; Respectively there are again three hypervariable region CDR1, CDR2, CDR3 in V district (V α, V β), and is wherein maximum with the CDR3 variation, directly determined the antigen-binding specificity of TCR.When TCR identification MHC-antigen peptide complex body, CDR1, CDR2 identification and in conjunction with the sidewall of MHC molecular antigen engagement groove, and CDR3 directly combines with antigen peptide.
According to TCR V α, V β gene homology, more than 80 TCR V α genes can be divided into 32 families, more than 60 TCR V β gene is divided into 24 families.Utilize each T cell clone that the characteristics of its unique CDR3 sequence are all arranged, adopt CDR3 spectral pattern analytical technology, can measure the frequency that each CDR3 of each TCR family occurs, reflect thus clone's property of T cell.Do not accept in the T cell of antigenic stimulation, be evenly distributed for the T cell clone of various antigens, show as many families and polyclone, particularly, show as about 8 CDR3 peaks that Gaussian distribution all appears being in each family; Antigenic stimulation then causes the some or several specific TCR family t cell responses hyperplasia of this antigen of identification, show as widow clone or mono-clonal distribution that 4 peaks appear being less than in the CDR3 member of this family, the TCR family that wherein has mono-clonal CDR3 distribution (showing as unimodal) namely is the TCR family of antigen-specific mono-clonal hyperplasia.The PCR of this family product is checked order, can obtain antigen-specific TCR CDR3 sequence.
CD8 +The T cell is that T is lymphocytic a kind of, by antigen recognition receptor (TCR α β) Recognition polypeptide antigen and the mixture that forms from body MHC I quasi-molecule, the target cell of can specific killing expressing the epitope that its TCR identifies, antibacterium and virus infection, acute be important effector cell in special-shaped transplant rejection and the lethal effect to tumour cell, be called as cytotoxic T lymphocyte (CTL).
In recent years, in the mouse model that infects tubercule bacillus, find functional CD8 +The shortage of T cell significantly increases mouse to the susceptibility of tubercule bacillus, shows CD8 +T cell and CD4 +The T cell is the same, has important provide protection in resisting tuberculosis infection.Clinical study is also found, CD8 +The T cell can be identified the cell of mycobacterium tuberculosis infection, by discharging bacterium in IFN-γ, the target cell of dissolving infection and the direct killing cell, plays a significant role in the anti-mycobacterium tuberculosis infection immune response.Identify the MHC I restricted CTL epitope of tuberculosis antigen, for illustrating CD8 +The protective effect of T cell in tuberculosis, understand tuberculosis immune response and research and development Antitubercular vaccine etc. in depth and have vital effect.
The Ag85 complex body is that tubercule bacillus is expressed a kind ofly has an immunodominant antigen protein, albumen by 85A, 85B and 3 kinds of height of 85C homology forms, relevant with the transferase active of mycobacterium, participate in the cell walls of synthetic mycobacterium, can inducing T cell propagation and IFN-γ release in majority contacts the healthy human body of tubercule bacillus, be the comparatively ideal candidate antigens of Vaccinum Calmette-Guerini.Ag85B 199-207Peptide is the tuberculosis antigen peptide of a high conservative, and it is restricted to have a HLA-A*0201, and the frequency of this equipotential gene in the crowd surpasses 40%.Ag85B 199-207Peptide can be induced the Th1 type protective immunological reaction of anti-mycobacterium tuberculosis, makes T effector cell express the cytokine performance anti-microbial effects such as IFN-γ and TNF-α.Experiment shows in the body, with Ag85B 199-207Immunity HLA-A2/Kb transgenic mice can improve T cell proliferation level and cytotoxicity level.
Summary of the invention
The object of the invention is to: filter out tuberculosis peptide Ag85B 199 – 207(KLVANNTRL) special TCR utilizes retroviral vector to be transfected into CD8 +In the T cell, obtain to express tuberculosis peptide Ag85B 199 – 207The CD8 of specific TCR +The T cell, and should be through the CD8 of tcr gene modification +The application of T cell in the preparation anti-tuberculosis drugs.
The technical solution adopted in the present invention is:
Tuberculosis peptide Ag85B 199 – 207Specific t-cell receptor (TCR) comprises α chain and β chain, and wherein, the described sequence of SEQ ID NO:3 is contained in the CDR3 district of α chain; The sequence shown in the SEQ ID NO:4 is contained in the CDR3 district of β chain.
Preferably, described tuberculosis peptide Ag85B 199 – 207The α chain of specificity TCR is to be substituted, to lack and/or increased the aminoacid sequence that one or more amino acid and/or the special and exogenous β chain of end modified rear resulting energy are assembled into the TCR protein molecular by the aminoacid sequence shown in the SEQ ID NO:10; The β chain is to be substituted, to lack and/or increased the aminoacid sequence that one or more amino acid and/or the special and exogenous α chain of end modified rear resulting energy are assembled into the TCR protein molecular by the aminoacid sequence shown in the SEQ ID NO:6.
Preferably, described tuberculosis peptide Ag85B 199 – 207The aminoacid sequence of the α chain of specificity TCR is shown in SEQ ID NO:12, and the aminoacid sequence of β chain is shown in SEQ ID NO:8.
Coding tuberculosis peptide Ag85B 199 – 207The gene of specificity TCR.
A kind of tuberculosis peptide Ag85B 199 – 207The fusion gene of specificity TCR, its sequence is shown in SEQ ID NO:13.
A kind of recombinant retroviral vector contains coding tuberculosis peptide Ag85B 199 – 207The gene of specificity TCR.
A kind of recombinant retroviral vector contains the gene shown in the SEQ ID NO:13.
Preferably, the carrier that sets out of above-mentioned recombinant retroviral vector is pMX-IRES-GFP, pMCs-IRES-GFP or pMYx-IRES-GFP.
The retrovirus that upper recombinant retroviral vector obtains after packing.
The CD8 of above-mentioned Retroviral Transfer +The T cell.
Tuberculosis peptide Ag85B specificity TCR, the gene of this TCR that encodes contains recombinant retroviral vector, the retrovirus of this gene, the CD8 of this Retroviral Transfer +The application of T cell in the preparation anti-tuberculosis drugs.
Realize that technique scheme concrete steps flow process is as follows:
1, screening tuberculosis peptide Ag85B 199 – 207(KLVANNTRL) special TCR
1. adopt lymphocyte separation medium to separate HLA-A*0201 type healthy volunteer's peripheral blood mononuclear cell (peripheral blood mononuclear cell, PBMC);
2. count PBMC, adjusting the PBMC number is 1 * 10 6/ hole, every porocyte add respectively and contain tuberculosis peptide Ag85B 199 – 207(KLVANNTRL) 10% FBS-1640 substratum 2ml;
3. behind the adherent culture 2h, add 25U/ml IL-2, added IL-2 to 50U/ml, added IL-2 100U/ml, and continued to cultivate 11 days with this concentration afterwards in the 5th day in the 3rd day;
4. magnetic bead sorting goes out CD8 +The T cell extracts its mRNA, and reverse transcription is cDNA;
5. CDR3 spectral pattern before and after complementary determining region 3(complementarity determining region3, CDR3) the spectral pattern analyzing and testing stimulates is found out the tuberculosis peptide Ag85B that is the mono-clonal hyperplasia after the stimulation 199 – 207Special TCR α, β gene family.
2, make up recombinant retroviral vector
1. the people TCR α, variable region, β gene family upstream (the variable region that report according to GeneBank, V) and downstream constant region (constant region, C) gene order, design TCR α, β chain full-length gene upstream and downstream primer amplify the special TCR α of tuberculosis peptide, β full-length gene.
2. design upstream and downstream, C region mutation site primer, adopt the recombinant PCR method with 9 key amino acids in TCR α, β chain C district (reference literature: Luo W. et al. Development of genetically engineered CD4 that suddenlys change +And CD8 +T-cells expressing TCRs specific for a 38 kDa M. tuberculosis antigen. J Mol Med. 2011,89 (9): 903-13).The purpose of this step is to reduce the mispairing of interior exogenous TCR α, β gene, because CD8 +There is the expression of endogenous TCR α, β gene in the T cell, can impel the albumen of exogenous α and beta gene expression correctly to be assembled into TCR protein molecular and stably express at CD8 by sudden change +The T cell surface is beneficial to its competition simultaneously in conjunction with CD8 +The CD3 molecule of T cell surface, the enhancing signal conduction function improves and modifies rear CD8 +The tuberculosis of T cell is active.Certainly, can also take other strategies to reduce the mispairing of interior exogenous TCR α, β chain herein, as: replace α, β full-length gene part C district (Sebestyen with CD3 ζ chain, Z. et al. (2008) Human TCR that incorporate CD3{zeta} induce highly preferred pairing between TCR{alpha} and beta} chains following gene transfer. J. Immunol. 180,7736-7746); Introduce disulfide linkage (Boulter in exogenous α, β gene C district, J.M. et al. (2003) Stable, soluble T-cell receptor molecules for crystallization and therapeutics. Protein Eng. 16,707-711); Suddenly change exogenous α, β gene C district key amino acid to change the static charge (Voss between α, the β chain, R.H. et al. (2008) Molecular design of the Cab interface favors specific pairing of introduced TCRab in human T cells. J. Immunol. 180,391-401); Exogenous α, β gene V district are merged into a strand TCR and merge (Willemsen with CD3 ζ chain, R.A. et al. (2000) Grafting primary human T lymphocytes with cancer-specific chimeric single chain and two chain TCR. Gene Ther. 7,1369-1377); Utilize 2A to connect exogenous α, β gene realization balance expression (Leisegang M, Engels B, Meyerhuber P, Kieback E, Sommermeyer D, Xue SA, Reuss S, Stauss H, Uckert W. Enhanced functionality of T cell receptor-redirected T cells is defined by the transgene cassette. J Mol Med. 2008,86:573-583.) etc.
3. utilize the recombinant PCR technology, with tuberculosis peptide Ag85B 199 – 207Special TCR α, beta gene fragment connect the minimum mutation T CR gene of acquisition by certainly shearing polypeptide P2A;
The hV β 16mC β that 4. will check order correct-P2A-hV α 13mC alpha fusion gene inserts retroviral vector pMX-IRES-GFP, and enzyme is cut evaluation;
5. adopt the liposome transfection method, with recombinant retrovirus expression plasmid pMX-hV β mC β-P2A-hV α mC α-IRES-GFP and envelope protein plasmid VSV-G cotransfection GP2-293;
6. collect 48h-72h virus supernatant, the concentrated and purified virus of low temperature ultracentrifugation;
7. recombinant virus infection NIH3T3 cell, the Flow cytometry virus titer, calculation formula: virus titer (IU/ml)=NIH3T3 cell count * GFP positive rate/virus concentrates liquid measure (ml).
3, identify the CD8 of recombinant retrovirus transfection +The tuberculosis of T cell is active
1. adopt the Ficoll density gradient centrifugation, separate HLA-A*0201 type donor peripheral blood PBMC;
2. magnetic bead sorting CD8 +The T cell;
3. IL-2 and anti-CD3 monoclonal antibody activate the T cell that sub-elects;
4. by infection multiplicity (multiplicity of infection, MOI)=13 above-mentioned recombinant retrovirus is infected CD8 +The T cell;
5. use IL-2 and anti-CD3 monoclonal antibody to stimulate metainfective CD8 +The T cell;
6. the per-cent of positive cell behind the Flow cytometry virus infection;
7. measure the CD8 of virus transfection +The anti-TB of T cell is active:
Experiment arranges: negative control group (tuberculosis peptide Ag85B 199 – 207The CD8 of specific TCR genetic modification +T cell+dendritic cell (dendritic cells, DC)), untransfected group (untransfected CD8 +T cell+load tuberculosis peptide Ag85B 199 – 207DC), empty carrier transfection group (empty carrier transfection CD8 +T cell+load tuberculosis peptide Ag85B 199 – 207DC), irrelevant peptide group (tuberculosis peptide Ag85B 199 – 207The CD8 of specific TCR genetic modification +The DC of T cell+load C MVpp65), TBTd+TB-DC group (tuberculosis peptide Ag85B 199 – 207The CD8 of specific TCR genetic modification +T cell+load tuberculosis peptide Ag85B 199 – 207DC).
Detect the above-mentioned secretion level of respectively organizing IFN-γ in the cells and supernatant, TNF-α with enzyme linked immunosorbent assay analysis method (enzyme-linked immunosorbent assay, ELISA); Detect CD8 with time resolved fluoro-immunoassay technology (time-resolved fluoroimmuno-assay, TRFIA) +The T cell is to the killing activity of DC.
Wherein, CD8 +The T cell is a kind of cell subsets in the human body, can obtain by separating in the human peripheral, and carry out amplification in vitro and cultivate, and separation and the experimental installation of cultivating require low, technology maturation.
Retroviral vector is the gene delivery vehicle that is made up by a kind of retroviral sequence, can foreign gene-carrying or DNA enter host cell, and be incorporated on the chromogene group, become at present commercially produced product, buy easily and obtain.
The construction process of recombinant retroviral vector is this area molecule clone technology commonly used, the recombinant retrovirus transfection method is animal nutrition commonly used at present, the artificial liposome method of in the present invention, using, can also use other chemical infection protocol, comprise: DEAE-dextran method, calcium phosphate method; And physical method, comprising: microinjection, electroporation, particle gun etc.
Beneficial effect of the present invention is:
The present invention successfully filters out tuberculosis peptide Ag85B 199 – 207Special TCR carries the CD8 of the Retroviral Transfer of this peptide specific TCR gene +But the exogenous tcr gene of T cell successful expression, specific recognition tuberculosis peptide Ag85B 199 – 207And mediation IFN-γ, TNF-α cytokine secretion and cytotoxic activity, have the using value of tuberculosis gene therapy, can be the cellular immunization treatment of adopting lungy and open up new footpath.
Description of drawings
Fig. 1 tuberculosis peptide Ag85B 199 – 207CD8 before and after stimulating +T cell TCR α and β chain CDR3 spectral pattern are analyzed;
Fig. 2 recombinant retroviral vector pMX-hV β 16mC β-P2A-hV α 13mC α-IRES-GFP makes up synoptic diagram;
The enzyme of Fig. 3 pMX-hV β 16mC β-P2A-hV α 13mC α-IRES-GFP is cut evaluation (M.DL15000 marker; 1. pMX-IRES-GFP empty carrier; 2. the XhoI enzyme of pMX-IRES-GFP empty carrier is cut product; 3. pMX-hV β 16mC β-P2A-hV α 13mC α-IRES-GFP; 4. the XhoI enzyme of pMX-hV β 16mC β-P2A-hV α 13mC α-IRES-GFP is cut product; 5. the XhoI+NotI double digestion product of pMX-hV β 16mC β-P2A-hV α 13mC α-IRES-GFP);
Expression (* 10) (a. light field of NIH3T3 cell GFP after the transfection of Fig. 4 fluorescence microscope recombinant virus; B. fluorescence; C. stacking diagram);
GFP the positive expression rate (a. untransfected of NIH3T3 cell after the transfection of Fig. 5 Flow cytometry recombinant virus; B. pMX-hV β 16mC β-P2A-hV α 13mC α-IRES-GFP);
CD8 after the transfection of Fig. 6 fluorescence microscope recombinant virus +The expression (* 10 of T cell GFP; EmTd: empty carrier transfection group; TBTd: the recombinant virus transfection group);
CD8 after the transfection of Fig. 7 Flow cytometry recombinant virus +The expression of T cell GFP (UnTd: untransfected group; EmTd: empty carrier transfection group; TBTd: the recombinant virus transfection group);
Fig. 8 ELISA detects CD8 +The secretion level of T cell IFN-γ;
Fig. 9 ELISA detects CD8 +The secretion level of T cell TNF-α;
Figure 10 TRFIA detects CD8 +The killing activity of T cell.
Embodiment
The present invention is further illustrated below in conjunction with embodiment, but be not limited to this.
The experimental technique of unreceipted actual conditions in following examples, operate according to normal condition, " molecular cloning experiment guide " (third edition) (the Sambrook J that writes such as Sambrook etc., Russell DW, Janssen K, the yellow training hall of Argentine J. waits translates 2002, Beijing: the condition Science Press), or the condition of advising according to manufacturer.
In following examples, all measurement data results represent with ± s, adopt the relatively difference of cytokine IFN-γ, TNF-α secretion level between each group of one-way analysis of variance (One-Way ANOVA), proofread and correct with Welch during heterogeneity of variance, adopt the LSD method to carry out comparing in twos between each group, adopt Dunnett ' s T3 method to proofread and correct during heterogeneity of variance.Inspection level α=0.05, two-tailed test.Adopt SPSS17.0 for windows statistical package to carry out data analysis.
Embodiment
1. screen tuberculosis peptide Ag85B 199 – 207 (KLVANNTRL) special TCR
1.1 density gradient centrifugation separation and purification PBMC
(1) adds an amount of Ficoll lymphocyte separation medium at the aseptic centrifuge tube of 15ml scale;
(2) the abundant mixing dilution of the peripheric venous blood of taking heparin anti-freezing and equivalent RPMI 1640 liquid, the anticoagulation of drawing 2 times of volumes with the pasteur dropper slowly is superimposed on the lymphocyte separation medium along tube wall, notes keeping the interface complete.18 ~ 20 ° of C, 1800 ~ 2000rpm/min horizontal centrifugal, 20 ~ 30min;
(3) centrifugal rear liquid in pipe is divided into four layers, and the upper strata is blood plasma and diluent, and the pipe end is mainly red corpuscle and GCL.The middle level is lymphocyte separation medium, has at the interface one in upper, middle level take mononuclearcell as main canescence cloud and mist layer;
(4) be inserted into buffy coat with suction pipe, draw mononuclearcell, place in another centrifuge tube, add 5 times with RPMI 1640 liquid of upper volume, 18 ~ 20 ° of C, the centrifugal 10min of 1500rpm/min is PBMC behind the thrombocyte that twice removal of washed cell major part mixes;
(5) cell counting and cell viability detect: the PBMC cell suspension mixes with the blue dye liquor of 0.4 % platform phenol of 1/10 volume, four total cell count of large grid on angle on the tally on the blood counting chamber, and 1/4th numbers of total cell count multiply by 10 4Be every ml concn; Dead cell pigmentable trypan blue, that lives is not painted, counts 200 lymphocytes, calculating viable cell percentage living cell rate %=(viable count/total cell count) * 100%.
1.2 preparation tuberculosis peptide, the special T cell clone of HIV peptide:
(1) counting PBMC, adjusting the PBMC number is 1 * 10 6/ hole adds respectively and contains 50ng/ml tuberculosis peptide Ag85B 199 – 207(KLVANNTRL) 10% FBS-1640 substratum 2ml;
(2) 37 ° of C, 5% CO 2After cultivating 2h under the condition, add IL-2 25U/ml;
Added IL-2 to 50U/ml in (3) the 3rd days, added IL-2 100U/ml, and continued to cultivate 11 days with this concentration afterwards in the 5th day.
1.3 immunomagnetic beads (beautiful day Ni biotech firm of Germany) sorting CD8 +The T cell.
1. 4 total RNA extraction reagent boxes (OMEGA) extract total RNA of the above-mentioned cell precipitation of collecting.
1.5 reverse transcription (RT) test kit (Fermentas) synthesizes cDNA.
1.6 34 TCR V of pcr amplification α gene family CDR3 fragment (reference literature: XIN-SHENG etc., 2006, Clinical ﹠amp; Laboratory Haematology, 28:405-415. doi:10.1111/j.1365-2257.2006.00827.x):
Utilize that 34 TCR V α family specificity upstream primers and shared downstream C α are outer, inboard primer is done heminested PCR:
First round PCR: every sample is done 34 PCR reaction tubess, and the 1st ~ 34 pipe adds respectively TCR V α 1 to V α 34 family's upstream primers, and every pipe adds shared downstream C α outside primer 1 μ l, and each primer concentration is 10 μ M.Every PCR reaction tubes volume is 25 μ l, contains cDNA template 1.0 μ l, 10mmol/L dNTP 0.5 μ l, 10 * Buffer, 2.5 μ l, 25mmol/LMgCl 21.5 μ l, Taq archaeal dna polymerase 0.625U.PCR reaction conditions: 95 ° of C denaturation 3min; 95 ° of C 30s, 60 ° of C 30s, 72 ° of C 1min, 35 circulations; 72 ° of C extend 10min.
Second takes turns PCR: the reaction cumulative volume is 25 μ l, contains first round PCR product 2 μ l, 10mmol/L dNTP 0.5 μ l, 10 * Buffer, 2.5 μ l, 25mmol/L MgCl 21.5 μ l, Taq archaeal dna polymerase 0.625U, 34 family's upstream primers of TCR V α, 1 μ l, the inboard C α of downstream FAM mark primer 1 μ l, each primer concentration is 10 μ M.PCR reaction conditions: 95 ° of C 2min; 60 ° of C 2min, 72 ° of C 10min, 4 circulations.
1.7 24 TCR V of pcr amplification β gene family CDR3 fragment (reference literature: XIN-SHENG etc., 2006, Clinical ﹠amp; Laboratory Haematology, 28:405 – 415. doi:10.1111/j.1365-2257.2006.00827.x):
Every sample is done 24 PCR reaction tubess, and every pipe adds TCR C β-FAM downstream primer 1 μ l, and the 1st to the 24th pipe adds respectively TCR V β 1 to TCR V β 24 upstream primers 1 μ l, and each primer concentration is 10 μ M.The PCR reaction volume is 25 μ l, contains cDNA template 1 μ l, 10mmol/L dNTP 0.5 μ l, 10 * Buffer, 2.5 μ l, 25mmol/L MgCl 21.5 μ l, Taq archaeal dna polymerase 0.625U.PCR reaction conditions: 94 ° of C sex change 3min; 94 ° of C 1min, 55 ° of C 1min, 72 ° of C 1min, 35 circulations; 72 ° of C extend 10min.
1.8 agarose gel electrophoresis:
Get 34 TCR V α and 24 each 5 μ l of TCR V β gene family PCR product, 2% agarose gel electrophoresis, 110V, 20min adopts gel imaging system to take a picture.Residue PCR product-20 a ° C saves backup.
1.9 the CDR3 spectral pattern is analyzed:
Get 34 V α, 24 V β gene family FAM fluorescent mark PCR product 2 μ l, at 373DNA sequenator (ABI, Perkin Elmer) carries out 6% polyacrylamide gel electrophoresis on, collect the fluorescent signal of the varying strength that different time occurs in the electrophoresis process, the data that GeneScan 672 software automatic analysis are collected, be converted to the peak of different positions, height and form, represent the frequency that each CDR3 member of TCR family occurs, reflect thus clone's property of each TCR family.Wherein, the TCR family that has a unimodal distribution namely is the TCR family of antigen-specific mono-clonal hyperplasia.
CDR3 spectral pattern analytical results shows that antigen peptide stimulates CD8 +Behind the T cell, part tcr gene family spectral pattern changes, and by original 8 or become the few peak of the list that is less than 8 peaks more than the Gaussian distribution of 8 peak types and distribute, shows that these families are because antigen peptide continues to stimulate widow clone or the mono-clonal hyperplasia that causes.The variation of CDR3 spectral pattern before and after the comparison stimulus, finding out stimulates the front polyclone that is, is respectively V α 13, V β 16 gene families (Fig. 1) of mono-clonal amplification after the tuberculosis peptide stimulates.
Order-checking shows, tuberculosis peptide Ag85B 199 – 207(KLVANNTRL) nucleotide sequence in the CDR3 district of special TCR V α 13, V β 16 is shown in SEQ ID NO:1 and SEQ ID NO:2, and the aminoacid sequence of two CDR3 sequence encodings is respectively shown in SEQ ID NO:3 and SEQ ID NO:4.
2. make up recombinant retroviral vector (make up flow process and see Fig. 2)
2.1 synthetic primer
V α 13, V β 16 gene family V region sequence characteristics according to the GeneBank report, design full-length gene upstream and downstream primer, design respectively the upstream and downstream primer according to the sequence (being mC α and mC β) after 9 the key amino acid sudden changes in people C district, according to P2A peptide catenation sequence design primer, all primer is synthetic by Invitrogen Shanghai Ying Jun Bioisystech Co., Ltd, and primer title and sequence are as follows:
Figure 101803DEST_PATH_IMAGE001
2.2 recombinant PCR amplification hV β 16mC β-P2A-hV α 13mC α merges full-length gene
(1) take the cDNA of step 1.5 preparation as template, utilize primer P1 and P2, the Pfu archaeal dna polymerase, pcr amplification hV β 16hC β full-length gene upstream is to sequence B 1(hV β 16mC β-1 district between the upper first group of mutational site of hC β).Wherein, the nucleotide sequence of hV β 16hC β full-length gene is shown in SEQ ID NO:5, and its coded aminoacid sequence is shown in SEQ ID NO:6.
(2) take the cDNA of step 1.5 preparation as template, utilize primer P3 and P4, Pfu archaeal dna polymerase, sequence B 2(mC β-2 district between group mutational site, the upper first group of mutational site to the second of pcr amplification hC β).
(3) take the cDNA of step 1.5 preparation as template, utilize primer P5 and P6, the Pfu archaeal dna polymerase, upper second group of mutational site, pcr amplification hC β district is to the sequence between the hC β downstream and 5 ' end P2A sequence B 3(mC β-3-5 ' end P2A district).
(4) B3 that the B2 that obtains with step (2) and step (3) obtain is as template, utilize primer P3 and P6, the Pfu archaeal dna polymerase, the upper first group of mutational site of recombinant PCR amplification hC β is to holding the P2A district to the sequence between the hC β downstream and 5 ' end P2A sequence B 4(mC β-2-5 ').
(5) B4 that the B1 that obtains with step (1) and step (4) obtain is as template, utilize primer P1 and P6, the Pfu archaeal dna polymerase, recombinant PCR amplification hV β 16 upstreams are to the sequence between the hC β downstream and 5 ' end P2A sequence, i.e. hV β 16mC β-5 ' end P2A region sequence B5.Wherein, the nucleotide sequence of hV β 16mC β section is shown in SEQ ID NO:7, and the aminoacid sequence of its coding is shown in SEQ ID NO:8.
(6) take the cDNA of step 1.5 preparation as template, utilize primer P7 and P8, the Pfu archaeal dna polymerase, the sequence A 1(3 ' between pcr amplification 3 ' end P2A and hV α 13hC α full-length gene upstream to the upper mutational site of hC α holds P2A-hV α 13mC α-1 district).Wherein, hV α 13hC α full-length gene order is shown in SEQ ID NO:9, and its coded aminoacid sequence is shown in SEQ ID NO:10.
(7) take the cDNA of step 1.5 preparation as template, utilize primer P9 and P10, Pfu archaeal dna polymerase, sequence A 2(hV α 13mC α-2 district on the pcr amplification hC α between mutational site to the hC α downstream).
(8) A2 that the A1 that obtains with step (6) and step (7) obtain is as template, utilize primer P7 and P10, the Pfu archaeal dna polymerase, the sequence between recombinant PCR amplification 3 ' end P2A and hV α 13 upstreams to the hC α downstream, i.e. 3 ' end P2A-hV α 13mC α region sequence A3.Wherein, the nucleotide sequence of hV α 13mC α section is shown in SEQ ID NO:11, and the aminoacid sequence of its coding is shown in SEQ ID NO:12.
(9) A3 that the B5 that obtains with step (5) and step (8) obtain utilizes primer P1 and P10 as template, Pfu archaeal dna polymerase, recombinant PCR amplification hV β 16mC β-P2A-hV α 13mC α (SEQ ID NO:13).
Above conventional PCR reaction system 25 μ l contain 10 * Buffer, 2.5 μ l, 10mmol/L dNTP 0.5 μ l, Pfu archaeal dna polymerase 0.2U, each 0.8 μ l of 10 μ M primers, template DNA 1 μ l.PCR reaction conditions: 95 ° of C sex change 5min; 95 ° of C 1min, 72 ° of C 90s, 35 circulations; 72 ° of C extend 10min.
Recombinant PCR reaction system 25 μ l contain 10 * Buffer, 2.5 μ l, 10mmol/L dNTP 0.5 μ l, Pfu archaeal dna polymerase 0.2U, each 0.8 μ l of 10 μ M primers, two kinds of each 3 μ l of PCR product template.PCR reaction conditions: 95 ° of C sex change 5min; 95 ° of C 30s, 50 ° of C 45s, 72 ° of C 45s, 3 circulations; 95 ° of C 45s, 72 ° of C 90s, 32 circulations; 72 ° of C extend 10min.
2.3 make up the cloning vector that contains hV β 16mC β-P2A-hV α 13mC α
(1) reclaims test kit (Omega) Separation and Recovery hV β 16mC β-P2A-hV α 13mC alpha gene fragment with gel;
(2) add A with DNA A-Tailing test kit (TaKaRa) at said gene fragment end;
(3) with in hV β 16mC β-P2A-hV α 13mC alpha gene fragment access pGEM-T carrier, ligation system 10 μ l:pGEM-T carriers 1 μ l, 10 ' ligation Buffer, 1 μ l, T4 dna ligase 1 μ l, 0.2pmol have added the PCR product of A purifying, and 16 ° of C connections are spent the night.
(4) ordinary method will connect correct Plasmid Transformation E.coli DH5 α competence bacteria.Then bacterium is coated on the penbritin flat board of 4ml 200mg/ml IPTG, 40ml 20 mg/ml X-gal overnight incubation.The bacterium colony of recombinant plasmid transformed is and is white, and the bacterium colony that empty plasmid transforms is blue.Select dull and stereotyped upper white colony, forward to 3ml Amp is housed +In the test tube of LB nutrient solution, 37 ° of C, 160rpm jolting 12-16h.
(5) extract plasmid with plasmid extraction test kit (Omega), with corresponding restriction enzyme the positive recombinant plasmid of primary dcreening operation is identified, and take recombinant plasmid as template, carried out pcr amplification, agarose gel electrophoresis is identified clip size.Send Invitrogen Shanghai Ying Jun Bioisystech Co., Ltd to check order the primary dcreening operation positive plasmid at last.Sequencing result shows that exogenous gene sequence and forecasting sequence that this recombinant plasmid contains are in full accord.
2.4 the structure of recombinant retroviral vector
(1) cut T carrier and the pMX-IRES-GFP empty plasmid that contains hV β 16mC β-P2A-hV α 13mC alpha fusion gene with restriction enzyme Xho I, Not I enzyme, glue reclaims hV β 16mC β-P2A-hV α 13mC alpha fusion gene fragment and vector gene fragment (method is with step 2.3) respectively;
(2) with after hV β 16mC β-P2A-hV α 13mC alpha fusion gene connects into pMX-IRES-GFP carrier (method is with step 2.3), transformed competence colibacillus bacterium XL-10, after coating the solid medium cultivation 12-16h that contains penbritin, select single bacterium colony, shake bacterium and spend the night;
(3) extracting plasmid, enzyme are cut qualification result and are shown, gene fragment is inserted correct (Fig. 3);
(4) select positive bacteria to drop into capable amplification cultivation, a large amount of extracting plasmid DNA.
2.5 the packing of retrovirus recombinant vectors
Recombinant plasmid mixes with the ratio of 1:1 with envelope protein plasmid VSV-G, adopts liposome transfection method transfection GP2-293 cell, the packing retrovirus, and the Lipofectamine 2000 test kit description operation that Invitrogen is pressed in experiment are collected viral supernatant.
2.6 recombinant retrovirus is concentrated and purified
(1) collects viral supernatant, 10000g, 4 ° of centrifugal 10min of C;
(2) reclaim viral supernatant, 50000g, 4 ° of centrifugal 2h of C;
(3) TNE of 1%-3% original volume is resuspended, after virus is dissolved fully, and packing ,-80 ° of C store;
2.14 Flow Cytometry Assay virus titer
(1) in advance with NIH3T3 cell (2 * 10 5/ hole) inoculation culture 24h;
(2) add polybrene PB to final concentration 8mg/L, add the viral supernatant of 10 μ l titre to be measured;
(3) behind the infection 24h, change fresh medium, remove pseudovirion;
(4) 37 ° of C observe the expression of green fluorescent protein (GFP) after continuing to cultivate 3d under the inverted fluorescence microscope;
After (5) 37 ° of C continued to cultivate 5d, after trysinization, PBS washed 3 times, resuspended with 200-300 μ l PBS, preparation density was 1-5 * 10 6The single cell suspension of/ml, flow cytometer detect its GFP the positive expression rate, calculate virus titer by following formula: virus titer (GFU/ml)=NIH3T3 cell count * positive rate/transfection virus supernatant amount (ml).
The fluorescence microscopy Microscopic observation, the NIH3T3 cell expressing green fluorescence of the retroviral infection of packing through the GP2-293 cell shows that GFP is at cells (Fig. 4).The titre that calculates recombinant virus is 8 * 10 6IU/mL(Fig. 5).
3. recombinant retrovirus infects CD8 + The T cell
3.1 with CD8 +T cell infection the day before yesterday is with 5 * 10 5Individual/hole is inoculated in 24 orifice plates;
3.2 the same day was abandoned the old liquid of cell cultures in transfection, was the viral stock solutions of 13 addings by MOI, adding PB is 8mg/L to final concentration, and 37 ° of C cultivate 4h;
3.3 the adding substratum, dilution PB to 2mg/L continues to cultivate 5 days;
3.4 centrifugal collecting cell, PBS washing 2 times, 2% Paraformaldehyde 96 is fixed;
3.5 flow cytometry analysis CD8 +T cell GFP the positive expression rate is 33.1%(Fig. 6,7).
4. identify the CD8 of recombinant retrovirus transfection + The tuberculosis of T cell is active
4.1 ELISA test kit (Wuhan Boster Biological Technology Co., Ltd.) is measured CD8 +The IFN-γ of T cell, TNF-α secretion level
The experiment contrast group arranges: negative control group (TBTd+DC: tuberculosis peptide Ag85B 199 – 207The CD8 of specific TCR genetic modification +T cell+DC), untransfected group (UnTd+DC-TB: untransfected CD8 +T cell+load tuberculosis peptide Ag85B 199 – 207DC), empty carrier transfection group (EmTd+DC-TB: empty carrier transfection CD8 +T cell+load tuberculosis peptide Ag85B 199 – 207DC), irrelevant peptide group (TBTd+DC-CMV: tuberculosis peptide Ag85B 199 – 207The CD8 of specific TCR genetic modification +The DC of T cell+load C MVpp65), TBTd+DC-TB group (tuberculosis peptide Ag85B 199 – 207The CD8 of specific TCR genetic modification +T cell+load tuberculosis peptide Ag85B 199 – 207DC); Following experiment contrast arranges all herewith.Experiment repeats 3 times, and method is as follows:
(1) DC is with 5 * 10 3Individual/hole is inoculated in 96 orifice plates, E:T=7 when surveying the secretory volume of IFN-γ by the E:T(that groped, E:T=20 when surveying the secretory volume of TNF-α) add CD8 +The T cell is established three multiple holes for every group;
(2) CD8 +T cell and DC mixed culture certain hour (mixed culture 18h when surveying IFN-γ, mixed culture 24h when surveying TNF-α) are collected each hole culture supernatant, operate by the test kit specification sheets.
ELISA result shows:
1. imitating target than (E:T)=7, with load tuberculosis peptide Ag85B 199 – 207DC mixed culture 18h the time, the CD8 of tuberculosis peptide specific TCR genetic modification +T cell IFN-γ secretion level reaches maximum 1427.930 ± 63.714pg/ml, the CD8 that be significantly higher than untransfected, dallies and dye +T cell and the CD8 that modifies with the tcr gene that the DC of not load tuberculosis peptide or other irrelevant peptide of load cultivates altogether +The T cell ( P<0.001), sees Fig. 8;
2. at E:T=20, with load tuberculosis peptide Ag85B 199 – 207DC mixed culture 24h the time, the CD8 of tuberculosis peptide specific TCR genetic modification +T cell TNF-α secretion level reaches maximum 1040.184 ± 31.769pg/ml, the CD8 that be significantly higher than untransfected, dallies and dye +T cell and the CD8 that modifies with the tcr gene that the DC of not load tuberculosis peptide or other irrelevant peptide of load cultivates altogether +The T cell ( P<0.001), sees Fig. 9.
4. 2 time resolved fluoro-immunoassay test kits (PerkinElmer) are measured CD8 +The T cell killing activity operates by the test kit specification sheets.
Temporal resolution immunofluorescence detected result shows: at E:T=30, with load tuberculosis peptide Ag85B 199 – 207DC mixed culture 4h the time, the CD8 that tcr gene is modified +The T cell killing activity is the highest, reaches 57.50%, the CD8 that be significantly higher than untransfected, dallies and dye +T cell and the CD8 that modifies with the tcr gene that the DC of not load tuberculosis peptide or other irrelevant peptide of load cultivates altogether +The level of killing and wounding of T cell ( P<0.001), sees Figure 10.
Above-mentioned experimental result shows: carry tuberculosis peptide Ag85B 199 – 207The CD8 of the Retroviral Transfer of specific TCR gene +But the exogenous tcr gene of T cell successful expression, specific recognition tuberculosis peptide Ag85B 199 – 207And mediation IFN-γ, TNF-α cytokine secretion and cytotoxic activity, have the using value of tuberculosis gene therapy, can be the cellular immunization treatment of adopting lungy and open up new footpath.
<110〉Nanfang Medical Univ
<120〉a kind of tuberculosis peptide Ag85B 199-207Specificity TCR, its recombinant retroviral vector and application
<130>
<160> 23
<170> PatentIn version 3.5
<210> 1
<211> 60
<212> DNA
<213> human
<400> 1
aatggtgcta caaacaagct catctttgga actggcactc tgattgttgt cctgcccaat 60
<210> 2
<211> 63
<212> DNA
<213> human
<400> 2
cgccttggac aggggatgaa cactgaagct ttctttggac aaggcaccag actcacagtt 60
gta 63
<210> 3
<211> 20
<212> PRT
<213> human
<400> 3
Asn Gly Ala Thr Asn Lys Leu Ile Phe Gly Thr Gly Thr Leu Ile Val
1 5 10 15
Val Leu Pro Asn
20
<210> 4
<211> 21
<212> PRT
<213> human
<400> 4
Arg Leu Gly Gln Gly Met Asn Thr Glu Ala Phe Phe Gly Gln Gly Thr
1 5 10 15
Arg Leu Thr Val Val
20
<210> 5
<211> 951
<212> DNA
<213> human
<400> 5
ctcgaggcca ggatggtttc caggctcctc agtttagtgt ccctttgtct cctgggagca 60
aagcacatag aagctggagt tactcagttc cccagccaca gcgtaataga gaagggccag 120
actgtgactc tgagatgtga cccaatttct ggacatgata atctttattg gtatcgacgt 180
gttatgggaa aagaaataaa atttctgtta cattttgtga aagagtctaa acaggatgag 240
tccggtatgc ccaacaatcg attcttagct gaaaggactg gagggacgta ttctactctg 300
aaggtgcagc ctgcagaact ggaggattct ggagtttatt tctgtgccag cagccgcctt 360
ggacagggga tgaacactga agctttcttt ggacaaggca ccagactcac agttgtagag 420
gacctgaaca aggtgttccc acccgaggtc gctgtgtttg agccatcaga agcagagatc 480
tcccacaccc aaaaggccac actggtgtgc ctggccacag gcttcttccc tgaccacgtg 540
gagctgagct ggtgggtgaa tgggaaggag gtgcacagtg gggtcagcac ggacccgcag 600
cccctcaagg agcagcccgc cctcaatgac tccagatact gcctgagcag ccgcctgagg 660
gtctcggcca ccttctggca gaacccccgc aaccacttcc gctgtcaagt ccagttctac 720
gggctctcgg agaatgacga gtggacccag gatagggcca aacccgtcac ccagatcgtc 780
agcgccgagg cctggggtag agcagactgt ggctttacct cggtgtccta ccagcaaggg 840
gtcctgtctg ccaccatcct ctatgagatc ctgctaggga aggccaccct gtatgctgtg 900
ctggtcagcg cccttgtgtt gatggccatg gtcaagagaa aggatttctg a 951
<210> 6
<211> 311
<212> PRT
<213> human
<400> 6
Val Ser Arg Leu Leu Ser Leu Val Ser Leu Cys Leu Leu Gly Ala Lys
1 5 10 15
His Ile Glu Ala Gly Val Thr Gln Phe Pro Ser His Ser Val Ile Glu
20 25 30
Lys Gly Gln Thr Val Thr Leu Arg Cys Asp Pro Ile Ser Gly His Asp
35 40 45
Asn Leu Tyr Trp Tyr Arg Arg Val Met Gly Lys Glu Ile Lys Phe Leu
50 55 60
Leu His Phe Val Lys Glu Ser Lys Gln Asp Glu Ser Gly Met Pro Asn
65 70 75 80
Asn Arg Phe Leu Ala Glu Arg Thr Gly Gly Thr Tyr Ser Thr Leu Lys
85 90 95
Val Gln Pro Ala Glu Leu Glu Asp Ser Gly Val Tyr Phe Cys Ala Ser
100 105 110
Ser Arg Leu Gly Gln Gly Met Asn Thr Glu Ala Phe Phe Gly Gln Gly
115 120 125
Thr Arg Leu Thr Val Val Glu Asp Leu Asn Lys Val Phe Pro Pro Glu
130 135 140
Val Ala Val Phe Glu Pro Ser Glu Ala Glu Ile Ser His Thr Gln Lys
145 150 155 160
Ala Thr Leu Val Cys Leu Ala Thr Gly Phe Phe Pro Asp His Val Glu
165 170 175
Leu Ser Trp Trp Val Asn Gly Lys Glu Val His Ser Gly Val Ser Thr
180 185 190
Asp Pro Gln Pro Leu Lys Glu Gln Pro Ala Leu Asn Asp Ser Arg Tyr
195 200 205
Cys Leu Ser Ser Arg Leu Arg Val Ser Ala Thr Phe Trp Gln Asn Pro
210 215 220
Arg Asn His Phe Arg Cys Gln Val Gln Phe Tyr Gly Leu Ser Glu Asn
225 230 235 240
Asp Glu Trp Thr Gln Asp Arg Ala Lys Pro Val Thr Gln Ile Val Ser
245 250 255
Ala Glu Ala Trp Gly Arg Ala Asp Cys Gly Phe Thr Ser Val Ser Tyr
260 265 270
Gln Gln Gly Val Leu Ser Ala Thr Ile Leu Tyr Glu Ile Leu Leu Gly
275 280 285
Lys Ala Thr Leu Tyr Ala Val Leu Val Ser Ala Leu Val Leu Met Ala
290 295 300
Met Val Lys Arg Lys Asp Phe
305 310
<210> 7
<211> 939
<212> DNA
<213〉artificial sequence
<400> 7
atggtttcca ggctcctcag tttagtgtcc ctttgtctcc tgggagcaaa gcacatagaa 60
gctggagtta ctcagttccc cagccacagc gtaatagaga agggccagac tgtgactctg 120
agatgtgacc caatttctgg acatgataat ctttattggt atcgacgtgt tatgggaaaa 180
gaaataaaat ttctgttaca ttttgtgaaa gagtctaaac aggatgagtc cggtatgccc 240
aacaatcgat tcttagctga aaggactgga gggacgtatt ctactctgaa ggtgcagcct 300
gcagaactgg aggattctgg agtttatttc tgtgccagca gccgccttgg acaggggatg 360
aacactgaag ctttctttgg acaaggcacc agactcacag ttgtagagga cctgaacaag 420
gtgttcccac ccgaggtcgc tgtgtttgag ccatcaaaag cagagatcgc acacacccaa 480
aaggccacac tggtgtgcct ggccacaggc ttcttccctg accacgtgga gctgagctgg 540
tgggtgaatg ggaaggaggt gcacagtggg gtcagcacgg acccgcagcc cctcaaggag 600
cagcccgccc tcaatgactc cagatactgc ctgagcagcc gcctgagggt ctcggccacc 660
ttctggcaga acccccgcaa ccacttccgc tgtcaagtcc agttctacgg gctctcggag 720
aatgacgagt ggacccagga tagggccaaa cccgtcaccc agatcgtcag cgccgaggcc 780
tggggtagag cagactgtgg cattacctcg gcatcctacc accaaggggt cctgtctgcc 840
accatcctct atgagatcct gctagggaag gccaccctgt atgctgtgct ggtcagcgcc 900
cttgtgttga tggccatggt caagagaaag gatttctga 939
<210> 8
<211> 311
<212> PRT
<213〉artificial sequence
<400> 8
Val Ser Arg Leu Leu Ser Leu Val Ser Leu Cys Leu Leu Gly Ala Lys
1 5 10 15
His Ile Glu Ala Gly Val Thr Gln Phe Pro Ser His Ser Val Ile Glu
20 25 30
Lys Gly Gln Thr Val Thr Leu Arg Cys Asp Pro Ile Ser Gly His Asp
35 40 45
Asn Leu Tyr Trp Tyr Arg Arg Val Met Gly Lys Glu Ile Lys Phe Leu
50 55 60
Leu His Phe Val Lys Glu Ser Lys Gln Asp Glu Ser Gly Met Pro Asn
65 70 75 80
Asn Arg Phe Leu Ala Glu Arg Thr Gly Gly Thr Tyr Ser Thr Leu Lys
85 90 95
Val Gln Pro Ala Glu Leu Glu Asp Ser Gly Val Tyr Phe Cys Ala Ser
100 105 110
Ser Arg Leu Gly Gln Gly Met Asn Thr Glu Ala Phe Phe Gly Gln Gly
115 120 125
Thr Arg Leu Thr Val Val Glu Asp Leu Asn Lys Val Phe Pro Pro Glu
130 135 140
Val Ala Val Phe Glu Pro Ser Lys Ala Glu Ile Ala His Thr Gln Lys
145 150 155 160
Ala Thr Leu Val Cys Leu Ala Thr Gly Phe Phe Pro Asp His Val Glu
165 170 175
Leu Ser Trp Trp Val Asn Gly Lys Glu Val His Ser Gly Val Ser Thr
180 185 190
Asp Pro Gln Pro Leu Lys Glu Gln Pro Ala Leu Asn Asp Ser Arg Tyr
195 200 205
Cys Leu Ser Ser Arg Leu Arg Val Ser Ala Thr Phe Trp Gln Asn Pro
210 215 220
Arg Asn His Phe Arg Cys Gln Val Gln Phe Tyr Gly Leu Ser Glu Asn
225 230 235 240
Asp Glu Trp Thr Gln Asp Arg Ala Lys Pro Val Thr Gln Ile Val Ser
245 250 255
Ala Glu Ala Trp Gly Arg Ala Asp Cys Gly Ile Thr Ser Ala Ser Tyr
260 265 270
His Gln Gly Val Leu Ser Ala Thr Ile Leu Tyr Glu Ile Leu Leu Gly
275 280 285
Lys Ala Thr Leu Tyr Ala Val Leu Val Ser Ala Leu Val Leu Met Ala
290 295 300
Met Val Lys Arg Lys Asp Phe
305 310
<210> 9
<211> 816
<212> DNA
<213> human
<400> 9
atggctttgc agagcactct gggggcggtg tggctagggc ttctcctcaa ctctctctgg 60
aaggttgcag aaagcaagga ccaagtgttt cagccttcca cagtggcatc ttcagaggga 120
gctgtggtgg aaatcttctg taatcactct gtgtccaatg cttacaactt cttctggtac 180
cttcacttcc cgggatgtgc accaagactc cttgttaaag gctcaaagcc ttctcagcag 240
ggacgataca acatgaccta tgaacggttc tcttcatcgc tgctcatcct ccaggtgcgg 300
gaggcagatg ctgctgttta ctactgtgct gtgaatggtg ctacaaacaa gctcatcttt 360
ggaactggca ctctgattgt tgtcctgccc aatatccaga accctgaccc tgccgtgtac 420
cagctgagag actctaaatc cagtgacaag tctgtctgcc tattcaccga ttttgattct 480
caaacaaatg tgtcacaaag taaggattct gatgtgtata tcacagacaa aactgtgcta 540
gacatgaggt ctatggactt caagagcaac agtgctgtgg cctggagcaa caaatctgac 600
tttgcatgtg caaacgcctt caacaacagc attattccag aagacacctt cttccccagc 660
ccagaaagtt cctgtgatgt caagctggtc gagaaaagct ttgaaacaga tacgaaccta 720
aactttcaaa acctgtcagt gattgggttc cgaatcctcc tcctgaaagt ggccgggttt 780
aatctgctca tgacgctgcg gctgtggtcc agctga 816
<210> 10
<211> 270
<212> PRT
<213> human
<400> 10
Ala Leu Gln Ser Thr Leu Gly Ala Val Trp Leu Gly Leu Leu Leu Asn
1 5 10 15
Ser Leu Trp Lys Val Ala Glu Ser Lys Asp Gln Val Phe Gln Pro Ser
20 25 30
Thr Val Ala Ser Ser Glu Gly Ala Val Val Glu Ile Phe Cys Asn His
35 40 45
Ser Val Ser Asn Ala Tyr Asn Phe Phe Trp Tyr Leu His Phe Pro Gly
50 55 60
Cys Ala Pro Arg Leu Leu Val Lys Gly Ser Lys Pro Ser Gln Gln Gly
65 70 75 80
Arg Tyr Asn Met Thr Tyr Glu Arg Phe Ser Ser Ser Leu Leu Ile Leu
85 90 95
Gln Val Arg Glu Ala Asp Ala Ala Val Tyr Tyr Cys Ala Val Asn Gly
100 105 110
Ala Thr Asn Lys Leu Ile Phe Gly Thr Gly Thr Leu Ile Val Val Leu
115 120 125
Pro Asn Ile Gln Asn Pro Asp Pro Ala Val Tyr Gln Leu Arg Asp Ser
130 135 140
Lys Ser Ser Asp Lys Ser Val Cys Leu Phe Thr Asp Phe Asp Ser Gln
145 150 155 160
Thr Asn Val Ser Gln Ser Lys Asp Ser Asp Val Tyr Ile Thr Asp Lys
165 170 175
Thr Val Leu Asp Met Arg Ser Met Asp Phe Lys Ser Asn Ser Ala Val
180 185 190
Ala Trp Ser Asn Lys Ser Asp Phe Ala Cys Ala Asn Ala Phe Asn Asn
195 200 205
Ser Ile Ile Pro Glu Asp Thr Phe Phe Pro Ser Pro Glu Ser Ser Cys
210 215 220
Asp Val Lys Leu Val Glu Lys Ser Phe Glu Thr Asp Thr Asn Leu Asn
225 230 235 240
Phe Gln Asn Leu Ser Val Ile Gly Phe Arg Ile Leu Leu Leu Lys Val
245 250 255
Ala Gly Phe Asn Leu Leu Met Thr Leu Arg Leu Trp Ser Ser
260 265 270
<210> 11
<211> 816
<212> DNA
<213〉artificial sequence
<400> 11
atggctttgc agagcactct gggggcggtg tggctagggc ttctcctcaa ctctctctgg 60
aaggttgcag aaagcaagga ccaagtgttt cagccttcca cagtggcatc ttcagaggga 120
gctgtggtgg aaatcttctg taatcactct gtgtccaatg cttacaactt cttctggtac 180
cttcacttcc cgggatgtgc accaagactc cttgttaaag gctcaaagcc ttctcagcag 240
ggacgataca acatgaccta tgaacggttc tcttcatcgc tgctcatcct ccaggtgcgg 300
gaggcagatg ctgctgttta ctactgtgct gtgaatggtg ctacaaacaa gctcatcttt 360
ggaactggca ctctgattgt tgtcctgccc aatatccaga accctgaccc tgccgtgtac 420
cagctgagag actctaaatc cagtgacaag tctgtctgcc tattcaccga ttttgattct 480
caaacaaatg tgtcacaaag taaggattct gatgtgtata tcacagacaa aactgtgcta 540
gacatgaggt ctatggactt caagagcaac agtgctgtgg cctggagcaa caaatctgac 600
tttgcatgtg caaacgcctt caacaacagc attattccag aagacacctt cttccccagc 660
tcagacgttc cctgtgatgt caagctggtc gagaaaagct ttgaaacaga tacgaaccta 720
aactttcaaa acctgtcagt gattgggttc cgaatcctcc tcctgaaagt ggccgggttt 780
aatctgctca tgacgctgcg gctgtggtcc agctga 816
<210> 12
<211> 270
<212> PRT
<213〉artificial sequence
<400> 12
Ala Leu Gln Ser Thr Leu Gly Ala Val Trp Leu Gly Leu Leu Leu Asn
1 5 10 15
Ser Leu Trp Lys Val Ala Glu Ser Lys Asp Gln Val Phe Gln Pro Ser
20 25 30
Thr Val Ala Ser Ser Glu Gly Ala Val Val Glu Ile Phe Cys Asn His
35 40 45
Ser Val Ser Asn Ala Tyr Asn Phe Phe Trp Tyr Leu His Phe Pro Gly
50 55 60
Cys Ala Pro Arg Leu Leu Val Lys Gly Ser Lys Pro Ser Gln Gln Gly
65 70 75 80
Arg Tyr Asn Met Thr Tyr Glu Arg Phe Ser Ser Ser Leu Leu Ile Leu
85 90 95
Gln Val Arg Glu Ala Asp Ala Ala Val Tyr Tyr Cys Ala Val Asn Gly
100 105 110
Ala Thr Asn Lys Leu Ile Phe Gly Thr Gly Thr Leu Ile Val Val Leu
115 120 125
Pro Asn Ile Gln Asn Pro Asp Pro Ala Val Tyr Gln Leu Arg Asp Ser
130 135 140
Lys Ser Ser Asp Lys Ser Val Cys Leu Phe Thr Asp Phe Asp Ser Gln
145 150 155 160
Thr Asn Val Ser Gln Ser Lys Asp Ser Asp Val Tyr Ile Thr Asp Lys
165 170 175
Thr Val Leu Asp Met Arg Ser Met Asp Phe Lys Ser Asn Ser Ala Val
180 185 190
Ala Trp Ser Asn Lys Ser Asp Phe Ala Cys Ala Asn Ala Phe Asn Asn
195 200 205
Ser Ile Ile Pro Glu Asp Thr Phe Phe Pro Ser Ser Asp Val Pro Cys
210 215 220
Asp Val Lys Leu Val Glu Lys Ser Phe Glu Thr Asp Thr Asn Leu Asn
225 230 235 240
Phe Gln Asn Leu Ser Val Ile Gly Phe Arg Ile Leu Leu Leu Lys Val
245 250 255
Ala Gly Phe Asn Leu Leu Met Thr Leu Arg Leu Trp Ser Ser
260 265 270
<210> 13
<211> 1818
<212> DNA
<213〉artificial sequence
<400> 13
atggtttcca ggctcctcag tttagtgtcc ctttgtctcc tgggagcaaa gcacatagaa 60
gctggagtta ctcagttccc cagccacagc gtaatagaga agggccagac tgtgactctg 120
agatgtgacc caatttctgg acatgataat ctttattggt atcgacgtgt tatgggaaaa 180
gaaataaaat ttctgttaca ttttgtgaaa gagtctaaac aggatgagtc cggtatgccc 240
aacaatcgat tcttagctga aaggactgga gggacgtatt ctactctgaa ggtgcagcct 300
gcagaactgg aggattctgg agtttatttc tgtgccagca gccgccttgg acaggggatg 360
aacactgaag ctttctttgg acaaggcacc agactcacag ttgtagagga cctgaacaag 420
gtgttcccac ccgaggtcgc tgtgtttgag ccatcaaaag cagagatcgc acacacccaa 480
aaggccacac tggtgtgcct ggccacaggc ttcttccctg accacgtgga gctgagctgg 540
tgggtgaatg ggaaggaggt gcacagtggg gtcagcacgg acccgcagcc cctcaaggag 600
cagcccgccc tcaatgactc cagatactgc ctgagcagcc gcctgagggt ctcggccacc 660
ttctggcaga acccccgcaa ccacttccgc tgtcaagtcc agttctacgg gctctcggag 720
aatgacgagt ggacccagga tagggccaaa cccgtcaccc agatcgtcag cgccgaggcc 780
tggggtagag cagactgtgg cattacctcg gcatcctacc accaaggggt cctgtctgcc 840
accatcctct atgagatcct gctagggaag gccaccctgt atgctgtgct ggtcagcgcc 900
cttgtgttga tggccatggt caagagaaag gatttcggct ccggagccac gaacttctct 960
ctgttaaagc aagcaggaga cgtggaagaa aaccccggtc ccatggcttt gcagagcact 1020
ctgggggcgg tgtggctagg gcttctcctc aactctctct ggaaggttgc agaaagcaag 1080
gaccaagtgt ttcagccttc cacagtggca tcttcagagg gagctgtggt ggaaatcttc 1140
tgtaatcact ctgtgtccaa tgcttacaac ttcttctggt accttcactt cccgggatgt 1200
gcaccaagac tccttgttaa aggctcaaag ccttctcagc agggacgata caacatgacc 1260
tatgaacggt tctcttcatc gctgctcatc ctccaggtgc gggaggcaga tgctgctgtt 1320
tactactgtg ctgtgaatgg tgctacaaac aagctcatct ttggaactgg cactctgatt 1380
gttgtcctgc ccaatatcca gaaccctgac cctgccgtgt accagctgag agactctaaa 1440
tccagtgaca agtctgtctg cctattcacc gattttgatt ctcaaacaaa tgtgtcacaa 1500
agtaaggatt ctgatgtgta tatcacagac aaaactgtgc tagacatgag gtctatggac 1560
ttcaagagca acagtgctgt ggcctggagc aacaaatctg actttgcatg tgcaaacgcc 1620
ttcaacaaca gcattattcc agaagacacc ttcttcccca gctcagacgt tccctgtgat 1680
gtcaagctgg tcgagaaaag ctttgaaaca gatacgaacc taaactttca aaacctgtca 1740
gtgattgggt tccgaatcct cctcctgaaa gtggccgggt ttaatctgct catgacgctg 1800
cggctgtggt ccagctga 1818
<210> 14
<211> 42
<212> DNA
<213〉artificial sequence
<400> 14
cgctcgaggc caggatggtt tccaggctcc tcagtttagt gt 42
<210> 15
<211> 37
<212> DNA
<213〉artificial sequence
<400> 15
tgtgtgcgat ctctgctttt gatggctcaa acacagc 37
<210> 16
<211> 33
<212> DNA
<213〉artificial sequence
<400> 16
atcaaaagca gagatcgcac acacccaaaa ggc 33
<210> 17
<211> 39
<212> DNA
<213〉artificial sequence
<400> 17
ggtggtagga tgccgaggta atgccacagt ctgctctac 39
<210> 18
<211> 38
<212> DNA
<213〉artificial sequence
<400> 18
gcattacctc ggcatcctac caccaagggg tcctgtct 38
<210> 19
<211> 79
<212> DNA
<213〉artificial sequence
<400> 19
gttttcttcc acgtctcctg cttgctttaa cagagagaag ttcgtggctc cggagccgaa 60
atcctttctc ttgaccatg 79
<210> 20
<211> 71
<212> DNA
<213〉artificial sequence
<400> 20
cttctctctg ttaaagcaag caggagacgt ggaagaaaac cccggtccca tggctttgca 60
gagcactctg g 71
<210> 21
<211> 37
<212> DNA
<213〉artificial sequence
<400> 21
atcacaggga acgtctgagc tggggaagaa ggtgtct 37
<210> 22
<211> 33
<212> DNA
<213〉artificial sequence
<400> 22
agctcagacg ttccctgtga tgtcaagctg gtc 33
<210> 23
<211> 42
<212> DNA
<213〉artificial sequence
<400> 23
gataagaatg cggccgctca gctggaccac agccgcagcg tc 42

Claims (10)

1. tuberculosis peptide Ag85B 199 – 207Specific t-cell receptor (TCR) comprises α chain and β chain, and wherein, the described sequence of SEQ ID NO:3 is contained in the CDR3 district of α chain; The sequence shown in the SEQ ID NO:4 is contained in the CDR3 district of β chain.
2. tuberculosis peptide Ag85B according to claim 1 199 – 207Specificity TCR, it is characterized in that the α chain of described TCR is to be substituted, to lack and/or increased the aminoacid sequence that one or more amino acid and/or the special and exogenous β chain of end modified rear resulting energy are assembled into the TCR protein molecular by the aminoacid sequence shown in the SEQ ID NO:10; The β chain is to be substituted, to lack and/or increased the aminoacid sequence that one or more amino acid and/or the special and exogenous α chain of end modified rear resulting energy are assembled into the TCR protein molecular by the aminoacid sequence shown in the SEQ ID NO:6.
3. tuberculosis peptide Ag85B according to claim 2 199 – 207Specificity TCR is characterized in that, the aminoacid sequence of described α chain is shown in SEQ ID NO:12, and the aminoacid sequence of β chain is shown in SEQ ID NO:8.
4. the gene of coding claim 1~3 each described TCR.
5. tuberculosis peptide Ag85B 199 – 207The fusion gene of specificity TCR, its sequence is shown in SEQ ID NO:13.
6. a recombinant retroviral vector contains claim 4 or 5 described genes.
7. recombinant retroviral vector according to claim 6 is characterized in that, the carrier that sets out comprises pMX-IRES-GFP, pMCs-IRES-GFP or pMYx-IRES-GFP.
8. claim 6 or the 7 described recombinant retroviral vectors retrovirus that obtains after packing.
9. the CD8 of Retroviral Transfer claimed in claim 8 +The T cell.
10. the CD8 of each described tuberculosis peptide Ag85B specificity TCR of claim 1~3, claim 4 or 5 described genes, claim 6 or 7 described recombinant retroviral vectors, retrovirus claimed in claim 8, Retroviral Transfer claimed in claim 9 +The application of T cell in the preparation anti-tuberculosis drugs.
CN201210326569.8A 2012-09-05 2012-09-05 Tuberculosis peptide Ag85B199-207 specific TCR and recombinant retroviral vector and use thereof Active CN102887951B (en)

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Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN101293925A (en) * 2007-04-29 2008-10-29 王鹤尧 Preparation and application of synthetic polypeptide medicaments for treating tubercle bacillus infection contamination

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN101293925A (en) * 2007-04-29 2008-10-29 王鹤尧 Preparation and application of synthetic polypeptide medicaments for treating tubercle bacillus infection contamination

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
《Journal of Cellular and Molecular Medicine》 20130404 Hao PP等 Development of CD8+ T cells expressing two distinct receptors specific for MTB and HIV-1 peptides 1-13 1-10 , *
《广东医学》 20080810 周明乾等 肺结核患者外周血alphabetaT细胞CDR3谱系研究 1283-1285 1-10 第29卷, 第08期 *
周明乾等: "肺结核患者外周血αβT细胞CDR3谱系研究", 《广东医学》 *

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