CA3015335A1 - Prognosis prediction for colorectal cancer - Google Patents

Prognosis prediction for colorectal cancer

Info

Publication number
CA3015335A1
CA3015335A1 CA3015335A CA3015335A CA3015335A1 CA 3015335 A1 CA3015335 A1 CA 3015335A1 CA 3015335 A CA3015335 A CA 3015335A CA 3015335 A CA3015335 A CA 3015335A CA 3015335 A1 CA3015335 A1 CA 3015335A1
Authority
CA
Canada
Prior art keywords
fas
dlgap4
rbm25
wars
tyms
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA3015335A
Other languages
English (en)
French (fr)
Inventor
Michael Alan Black
Jan Friederichs
Bernhard Holzmann
Yu-Hsin Lin
John Lindsay Mccall
Hjalmar Nekarda
Robert Craig Pollock
Anthony Edmund Reeve
Robert Rosenberg
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Pacific Edge Biotechnology Ltd
Original Assignee
Pacific Edge Biotechnology Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Pacific Edge Biotechnology Ltd filed Critical Pacific Edge Biotechnology Ltd
Publication of CA3015335A1 publication Critical patent/CA3015335A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/574—Immunoassay; Biospecific binding assay; Materials therefor for cancer
    • G01N33/57407—Specifically defined cancers
    • G01N33/57419—Specifically defined cancers of colon
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10—Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/20—Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/30—Microarray design
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/118—Prognosis of disease development
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/16—Primer sets for multiplex assays
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Biotechnology (AREA)
  • Immunology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Medical Informatics (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Pathology (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Microbiology (AREA)
  • Oncology (AREA)
  • Biochemistry (AREA)
  • Hospice & Palliative Care (AREA)
  • Urology & Nephrology (AREA)
  • Hematology (AREA)
  • Biomedical Technology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Cell Biology (AREA)
  • Food Science & Technology (AREA)
  • Medicinal Chemistry (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Peptides Or Proteins (AREA)
CA3015335A 2005-12-23 2006-12-22 Prognosis prediction for colorectal cancer Abandoned CA3015335A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
NZ544432 2005-12-23
NZ544432A NZ544432A (en) 2005-12-23 2005-12-23 Prognosis prediction for colorectal cancer using a prognositc signature comprising markers ME2 and FAS
CA2640352A CA2640352C (en) 2005-12-23 2006-12-22 Prognosis prediction for colorectal cancer

Related Parent Applications (1)

Application Number Title Priority Date Filing Date
CA2640352A Division CA2640352C (en) 2005-12-23 2006-12-22 Prognosis prediction for colorectal cancer

Publications (1)

Publication Number Publication Date
CA3015335A1 true CA3015335A1 (en) 2007-06-28

Family

ID=38188869

Family Applications (2)

Application Number Title Priority Date Filing Date
CA3015335A Abandoned CA3015335A1 (en) 2005-12-23 2006-12-22 Prognosis prediction for colorectal cancer
CA2640352A Expired - Fee Related CA2640352C (en) 2005-12-23 2006-12-22 Prognosis prediction for colorectal cancer

Family Applications After (1)

Application Number Title Priority Date Filing Date
CA2640352A Expired - Fee Related CA2640352C (en) 2005-12-23 2006-12-22 Prognosis prediction for colorectal cancer

Country Status (10)

Country Link
US (3) US10422005B2 (enExample)
EP (3) EP2371972B1 (enExample)
JP (3) JP5632581B2 (enExample)
KR (3) KR101530689B1 (enExample)
CN (1) CN101389957B (enExample)
AU (1) AU2006328023B2 (enExample)
CA (2) CA3015335A1 (enExample)
ES (3) ES2525219T3 (enExample)
NZ (3) NZ544432A (enExample)
WO (1) WO2007073220A1 (enExample)

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Also Published As

Publication number Publication date
EP1977237A4 (en) 2009-03-11
KR101562644B1 (ko) 2015-10-23
JP6058780B2 (ja) 2017-01-11
US20090181384A1 (en) 2009-07-16
KR101530689B1 (ko) 2015-06-22
US20200140955A1 (en) 2020-05-07
CN101389957A (zh) 2009-03-18
EP2392678A3 (en) 2012-03-21
CA2640352C (en) 2018-10-02
EP2371972A1 (en) 2011-10-05
US11180815B2 (en) 2021-11-23
NZ544432A (en) 2009-07-31
KR20130105764A (ko) 2013-09-25
ES2525219T3 (es) 2014-12-19
JP2014193172A (ja) 2014-10-09
EP2392678A2 (en) 2011-12-07
KR20080102360A (ko) 2008-11-25
ES2484702T3 (es) 2014-08-12
JP6218141B2 (ja) 2017-10-25
ES2536233T3 (es) 2015-05-21
EP2371972B1 (en) 2014-04-23
CN101389957B (zh) 2013-08-21
EP1977237A1 (en) 2008-10-08
EP1977237B1 (en) 2014-09-10
KR20150005726A (ko) 2015-01-14
NZ597363A (en) 2013-08-30
NZ586616A (en) 2012-04-27
KR101579934B1 (ko) 2015-12-28
WO2007073220A1 (en) 2007-06-28
AU2006328023B2 (en) 2013-09-26
WO2007073220A9 (en) 2007-11-08
US20160068916A1 (en) 2016-03-10
CA2640352A1 (en) 2007-06-28
US10422005B2 (en) 2019-09-24
JP5632581B2 (ja) 2014-11-26
JP2009521215A (ja) 2009-06-04
AU2006328023A1 (en) 2007-06-28
JP2016052329A (ja) 2016-04-14
EP2392678B1 (en) 2015-02-11

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