CA2982775A1 - Methods for typing of lung cancer - Google Patents

Methods for typing of lung cancer Download PDF

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Publication number
CA2982775A1
CA2982775A1 CA2982775A CA2982775A CA2982775A1 CA 2982775 A1 CA2982775 A1 CA 2982775A1 CA 2982775 A CA2982775 A CA 2982775A CA 2982775 A CA2982775 A CA 2982775A CA 2982775 A1 CA2982775 A1 CA 2982775A1
Authority
CA
Canada
Prior art keywords
biomarkers
sample
classifier biomarkers
classifier
hybridization
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA2982775A
Other languages
English (en)
French (fr)
Inventor
Hawazin FARUKI
Myla LAI-GOLDMAN
Greg MAYHEW
Charles Perou
David Neil Hayes
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
University of North Carolina at Chapel Hill
Genecentric Therapeutics Inc
Original Assignee
University of North Carolina at Chapel Hill
Genecentric Therapeutics Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by University of North Carolina at Chapel Hill, Genecentric Therapeutics Inc filed Critical University of North Carolina at Chapel Hill
Publication of CA2982775A1 publication Critical patent/CA2982775A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/112—Disease subtyping, staging or classification
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/118—Prognosis of disease development
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Pathology (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Genetics & Genomics (AREA)
  • Wood Science & Technology (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Hospice & Palliative Care (AREA)
  • Biophysics (AREA)
  • Oncology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CA2982775A 2015-04-14 2016-04-14 Methods for typing of lung cancer Abandoned CA2982775A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201562147547P 2015-04-14 2015-04-14
US62/147,547 2015-04-14
PCT/US2016/027503 WO2016168446A1 (en) 2015-04-14 2016-04-14 Methods for typing of lung cancer

Publications (1)

Publication Number Publication Date
CA2982775A1 true CA2982775A1 (en) 2016-10-20

Family

ID=57126370

Family Applications (1)

Application Number Title Priority Date Filing Date
CA2982775A Abandoned CA2982775A1 (en) 2015-04-14 2016-04-14 Methods for typing of lung cancer

Country Status (6)

Country Link
US (4) US20190203296A1 (cg-RX-API-DMAC10.html)
EP (1) EP3283654A4 (cg-RX-API-DMAC10.html)
JP (1) JP2018512160A (cg-RX-API-DMAC10.html)
CN (1) CN107849613A (cg-RX-API-DMAC10.html)
CA (1) CA2982775A1 (cg-RX-API-DMAC10.html)
WO (1) WO2016168446A1 (cg-RX-API-DMAC10.html)

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2950623A1 (en) 2014-05-30 2015-12-03 Myla LAI-GOLDMAN Methods for typing of lung cancer
US11514289B1 (en) * 2016-03-09 2022-11-29 Freenome Holdings, Inc. Generating machine learning models using genetic data
WO2017201165A1 (en) 2016-05-17 2017-11-23 Genecentric Diagnostics, Inc. Methods for subtyping of lung adenocarcinoma
US11041214B2 (en) 2016-05-17 2021-06-22 Genecentric Therapeutics, Inc. Methods for subtyping of lung squamous cell carcinoma
CN109182526A (zh) * 2018-10-10 2019-01-11 杭州翱锐生物科技有限公司 用于早期肝癌辅助诊断的试剂盒及其检测方法
WO2023009174A1 (en) * 2021-07-30 2023-02-02 Oregon Health & Science University Methods for predicting lymph node status, likelihood of metastasis, and/or overall prognosis in patients with melanoma
CN116403648B (zh) * 2023-06-06 2023-08-01 中国医学科学院肿瘤医院 一种基于多维分析建立的小细胞肺癌免疫新分型方法

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2002343443A1 (en) * 2001-09-28 2003-04-14 Whitehead Institute For Biomedical Research Classification of lung carcinomas using gene expression analysis
US20060024692A1 (en) * 2002-09-30 2006-02-02 Oncotherapy Science, Inc. Method for diagnosing non-small cell lung cancers
TW200413725A (en) * 2002-09-30 2004-08-01 Oncotherapy Science Inc Method for diagnosing non-small cell lung cancers
WO2008151110A2 (en) * 2007-06-01 2008-12-11 The University Of North Carolina At Chapel Hill Molecular diagnosis and typing of lung cancer variants
CN101509035A (zh) * 2008-09-05 2009-08-19 中国人民解放军总医院 肺癌分型的基因序列及其应用
CA2950623A1 (en) * 2014-05-30 2015-12-03 Myla LAI-GOLDMAN Methods for typing of lung cancer

Also Published As

Publication number Publication date
CN107849613A (zh) 2018-03-27
EP3283654A1 (en) 2018-02-21
JP2018512160A (ja) 2018-05-17
US20220002820A1 (en) 2022-01-06
US20190203296A1 (en) 2019-07-04
US20210147948A1 (en) 2021-05-20
EP3283654A4 (en) 2018-12-12
WO2016168446A1 (en) 2016-10-20
US20220243283A1 (en) 2022-08-04

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Legal Events

Date Code Title Description
FZDE Discontinued

Effective date: 20220705