CA2440035A1 - A system and method for managing gene expression data - Google Patents

A system and method for managing gene expression data Download PDF

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Publication number
CA2440035A1
CA2440035A1 CA002440035A CA2440035A CA2440035A1 CA 2440035 A1 CA2440035 A1 CA 2440035A1 CA 002440035 A CA002440035 A CA 002440035A CA 2440035 A CA2440035 A CA 2440035A CA 2440035 A1 CA2440035 A1 CA 2440035A1
Authority
CA
Canada
Prior art keywords
gene
sample
expression
analysis
data
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA002440035A
Other languages
English (en)
French (fr)
Inventor
Victor Markowitz
Thodoros Topaloglu
Anthony Kosky
Doug Dolginow
Kevin Mcloughlin
John M. Campbell
Dmitry Krylov
I-Min A. Chen
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Ore Pharmaceuticals Inc
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of CA2440035A1 publication Critical patent/CA2440035A1/en
Abandoned legal-status Critical Current

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Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10—Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/30—Data warehousing; Computing architectures
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression

Landscapes

  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Theoretical Computer Science (AREA)
  • Biophysics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Medical Informatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Databases & Information Systems (AREA)
  • Bioethics (AREA)
  • Chemical & Material Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
CA002440035A 2001-03-05 2002-03-05 A system and method for managing gene expression data Abandoned CA2440035A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US79783001A 2001-03-05 2001-03-05
US09/797,830 2001-03-05
PCT/US2002/006684 WO2002071059A1 (en) 2001-03-05 2002-03-05 A system and method for managing gene expression data

Publications (1)

Publication Number Publication Date
CA2440035A1 true CA2440035A1 (en) 2002-09-12

Family

ID=25171905

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002440035A Abandoned CA2440035A1 (en) 2001-03-05 2002-03-05 A system and method for managing gene expression data

Country Status (4)

Country Link
EP (1) EP1366359A1 (ja)
JP (1) JP2004535612A (ja)
CA (1) CA2440035A1 (ja)
WO (1) WO2002071059A1 (ja)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2006001397A1 (ja) * 2004-06-25 2006-01-05 National Institute Of Advanced Industrial Science And Technology 細胞ネットワーク解析システム
JP2006294014A (ja) * 2005-03-16 2006-10-26 Kumamoto Technology & Industry Foundation 解析プログラム、プロテインチップ、プロテインチップの製造方法、および、抗体カクテル
US9183349B2 (en) 2005-12-16 2015-11-10 Nextbio Sequence-centric scientific information management
JP2009520278A (ja) 2005-12-16 2009-05-21 ネクストバイオ 科学情報知識管理のためのシステムおよび方法
WO2009111581A1 (en) 2008-03-04 2009-09-11 Nextbio Categorization and filtering of scientific data
JP5838557B2 (ja) 2010-07-05 2016-01-06 ソニー株式会社 生体情報処理方法および装置、並びに記録媒体
JP6222202B2 (ja) * 2010-07-05 2017-11-01 ソニー株式会社 生体情報処理方法および装置、並びに記録媒体
WO2012098515A1 (en) * 2011-01-19 2012-07-26 Koninklijke Philips Electronics N.V. Method for processing genomic data
CN105279397B (zh) * 2015-10-26 2017-12-19 华东交通大学 一种识别蛋白质相互作用网络中关键蛋白质的方法
CN107368700A (zh) * 2017-07-21 2017-11-21 上海桑格信息技术有限公司 基于计算云平台的微生物多样性交互分析系统及其方法

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5943668A (en) * 1997-06-30 1999-08-24 International Business Machines Corporation Relational emulation of a multi-dimensional database
US6185561B1 (en) * 1998-09-17 2001-02-06 Affymetrix, Inc. Method and apparatus for providing and expression data mining database

Also Published As

Publication number Publication date
WO2002071059A1 (en) 2002-09-12
JP2004535612A (ja) 2004-11-25
EP1366359A1 (en) 2003-12-03

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Legal Events

Date Code Title Description
EEER Examination request
FZDE Discontinued