CA2371238A1 - Amino acid sequence evaluation system - Google Patents

Amino acid sequence evaluation system Download PDF

Info

Publication number
CA2371238A1
CA2371238A1 CA002371238A CA2371238A CA2371238A1 CA 2371238 A1 CA2371238 A1 CA 2371238A1 CA 002371238 A CA002371238 A CA 002371238A CA 2371238 A CA2371238 A CA 2371238A CA 2371238 A1 CA2371238 A1 CA 2371238A1
Authority
CA
Canada
Prior art keywords
amino acid
query
acid sequence
motif
score
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA002371238A
Other languages
English (en)
French (fr)
Inventor
Stefano Volinia
Hung-Sen Lai
Michael B. Yaffe
German G. Lepar
Lewis C. Cantley
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Beth Israel Deaconess Medical Center Inc
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of CA2371238A1 publication Critical patent/CA2371238A1/en
Abandoned legal-status Critical Current

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Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/30—Detection of binding sites or motifs
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Chemical & Material Sciences (AREA)
  • Evolutionary Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Peptides Or Proteins (AREA)
CA002371238A 1999-04-23 2000-04-21 Amino acid sequence evaluation system Abandoned CA2371238A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US29837199A 1999-04-23 1999-04-23
US09/298,371 1999-04-23
PCT/US2000/010756 WO2000065358A2 (en) 1999-04-23 2000-04-21 Amino acid sequence evaluation system

Publications (1)

Publication Number Publication Date
CA2371238A1 true CA2371238A1 (en) 2000-11-02

Family

ID=23150210

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002371238A Abandoned CA2371238A1 (en) 1999-04-23 2000-04-21 Amino acid sequence evaluation system

Country Status (5)

Country Link
EP (1) EP1173755A2 (ja)
JP (1) JP2002543390A (ja)
AU (1) AU4479200A (ja)
CA (1) CA2371238A1 (ja)
WO (1) WO2000065358A2 (ja)

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5532167A (en) * 1994-01-07 1996-07-02 Beth Israel Hospital Substrate specificity of protein kinases
US20020068301A1 (en) * 1997-05-28 2002-06-06 Hung-Sen Lai Cyclic peptide libraries and methods of use thereof to identify binding motifs

Also Published As

Publication number Publication date
WO2000065358A3 (en) 2001-01-11
EP1173755A2 (en) 2002-01-23
JP2002543390A (ja) 2002-12-17
WO2000065358A2 (en) 2000-11-02
AU4479200A (en) 2000-11-10

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Legal Events

Date Code Title Description
FZDE Discontinued